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Domain name : PF00558.11_Vpu
Domain size : 96
Domain gathering score : -9.5000
Domain architecture : TM/SP [1 37], non-TM/SP [38 96]
Total query sequences in database : 31
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gi|139439|sp|P08808|VPU_HV1W2|Protein Vpu, Human immunodeficiency virus type 1 (WMJ2 ISOLATE)
Vpu      Vpu protein                                    -16.0      0.013   1
Vpu        1/1       1    34 []     1    96 []   -16.0    0.013
Vpu: domain 1 of 1, from 1 to 34: score -16.0, E = 0.013
                   *->MlsleiiglialiVaLIilaIVVWtiviksvyreYrkikkQdRRere
                                                                     
  gi|139439|     -    ----------------------------------------------- -    

                   IdrLikRIRERaEDSgNESnGdeEEeLakLvhsydnnhGfdnPmfednL<
                            ERaEDSgNES+Gd EE L++Lv+     +G+d ++++d+L 
  gi|139439|     1 ---------ERAEDSGNESEGDHEE-LSALVD-----MGHDALWDVDDL  34   

                   -*
                     
  gi|139439|     -    -    

Score/E-value (less TMSP): 36.618/9.8040193001279e-08
TMSP/non-TMSP/fixed score (recomputed/original total): -52.618/57.018/-13.361 (-8.961/-16.0)