Header descriptions for section "Error rates computation for f=x.xx" -------------------------------------------------------------------- TCDBname : Class and protein ID (UniProt) id of entry in the TCDB database Refclass : TCDB class name TCDBcutoff : The smallest BLASTP alignment score of the true-positive hit belonging to the same TCDB class as the masked seed TCDB entry TCDBEvalue : The TCDBcutoff translated into its E-value TPorig : The total number of true-positive hits belonging to the same class as the original seed entry above the TCDBcutoff FPorig : The total number of false-positive hits belonging to a different class from the original seed entry above the TCDBcutoff FNorig : The total number of true-positive hits belonging to the same class as the original seed entry below the TCDBcutoff FDRorig : False-discovery rate calculated as FPorig/(FPorig+TPorig) for the original seed entry sensitivityorig : Sensitivity calculated as TPorig/(TPorig+FNorig) for the original seed entry TPmask : The total number of true-positive hits belonging to the same class as the masked seed entry above the TCDBcutoff FPmask : The total number of false-positive hits belonging to a different class from the masked seed entry above the TCDBcutoff FNmask : The total number of true-positive hits belonging to the same class as the masked seed entry below the TCDBcutoff FDRmask : False-discovery rate calculated as FPmask/(FPmask+TPmask) for the masked seed entry sensitivitymask : Sensitivity calculated as TPmask/(TPmask+FNmask) for the masked seed entry TPctrl : The total number of true-positive hits belonging to the same class as the control seed entry above the TCDBcutoff FPctrl : The total number of false-positive hits belonging to a different class from the control seed entry above the TCDBcutoff FNctrl : The total number of true-positive hits belonging to the same class as the control seed entry below the TCDBcutoff FDRctrl : False-discovery rate calculated as FPctrl/(FPctrl+TPctrl) for the control seed entry sensitivityctrl : Sensitivity calculated as TPctrl/(TPctrl+FNctrl) for the control seed entry Header descriptions for section "Mask ratio computations for f=x.xx" -------------------------------------------------------------------- TCDBname : Class and protein ID (UniProt) id of entry in the TCDB database Protein-TM-landscape : The simple and complex TM helices pattern within the seed entry. The pattern is dependent on the chosen f. Simple and complex TMs are denoted by 'x' and 'o' respectively. Masking-ratio : The ratio of simple TM helices (denoted as x) over the complex helices (denoted as o) total-TM : The total number of TM helices found in the seed entry