The line chart above shows the average monthly frequency of aa changes in the Spike protein. Only aa changes that were present in more than 2 percent of circulating strains in any of the months were represented in the line chart. Please note that the frequency of aa changes in the most recent months tends to fluctuate as the database are still being populated. The chart will appear to be empty if there are no aa changes that met this threshold in the protein.
The line chart above shows the average yearly frequency of aa changes in the Spike protein. Only aa changes that were present in more than 2 percent of circulating strains in any of the years were represented in the line chart. Please note that the frequency of aa changes in the most recent months tends to fluctuate as the database are still being populated. The chart will appear to be empty if there are no aa changes that met this threshold in the protein.
| Accession | Protein | Strain | WildtypeAA | Position | MutatedAA | #Occurrence | Date_of_collection(YYYYMMDD) |
|---|---|---|---|---|---|---|---|
| EPI_ISL_613411 | Spike | hCoV-19/Spain/EX-IBV-97005002/2020 | M | 1 | C | 16 (geo) | 20200313 |
| EPI_ISL_477854 | Spike | hCoV-19/Scotland/CVR2090/2020 | M | 1 | F | 18 (geo) | 20200410 |
| EPI_ISL_763351 | Spike | hCoV-19/Ireland/LK-UHL3/2020 | M | 1 | P | 13 (geo) | 20200401 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | M | 1 | G | 1 | 20200402 |
| EPI_ISL_454166 | Spike | hCoV-19/Portugal/PT0442/2020 | M | 1 | E | 2 (geo) | 20200323 |
| EPI_ISL_848555 | Spike | hCoV-19/Brazil/PA-IEC176486/2020 | M | 1 | V | 2 (geo) | 20201015 |
| EPI_ISL_546327 | Spike | hCoV-19/USA/TX-HMH-6893/2020 | M | 1 | I | 2 (geo) | 20200625 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | M | 1 | L | 2 (geo) | 20200428 |
| EPI_ISL_420942 | Spike | hCoV-19/Wales/PHWC-24DF0/2020 | F | 2 | L | 50 (geo) | 20200321 |
| EPI_ISL_448648 | Spike | hCoV-19/England/OXON-ADF44/2020 | F | 2 | Q | 7 (geo) | 20200000 |
| EPI_ISL_430846 | Spike | hCoV-19/France/IDF-CIBU-200634/2020 | F | 2 | V | 45 (geo) | 20200401 |
| EPI_ISL_763351 | Spike | hCoV-19/Ireland/LK-UHL3/2020 | F | 2 | Y | 14 (geo) | 20200401 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | F | 2 | I | 1 | 20200402 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | F | 2 | C | 8 (geo) | 20200317 |
| EPI_ISL_454166 | Spike | hCoV-19/Portugal/PT0442/2020 | F | 2 | A | 2 (geo) | 20200323 |
| EPI_ISL_649921 | Spike | hCoV-19/England/204742216/2020 | V | 3 | G | 264 (geo) | 20200000 |
| EPI_ISL_420942 | Spike | hCoV-19/Wales/PHWC-24DF0/2020 | V | 3 | F | 33 (geo) | 20200321 |
| EPI_ISL_441655 | Spike | hCoV-19/England/CAMB-7D129/2020 | V | 3 | I | 8 (geo) | 20200406 |
| EPI_ISL_448648 | Spike | hCoV-19/England/OXON-ADF44/2020 | V | 3 | S | 10 (geo) | 20200000 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | V | 3 | L | 23 (geo) | 20200317 |
| EPI_ISL_430846 | Spike | hCoV-19/France/IDF-CIBU-200634/2020 | V | 3 | C | 25 (geo) | 20200401 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | V | 3 | D | 2 (geo) | 20200510 |
| EPI_ISL_796018 | Spike | hCoV-19/Hebei/IVDC-04-01/2021 | V | 3 | T | 1 | 20210103 |
| EPI_ISL_462325 | Spike | hCoV-19/Singapore/207/2020 | F | 4 | S | 8 (geo) | 20200429 |
| EPI_ISL_722479 | Spike | hCoV-19/Netherlands/NB-EMC-402/2020 | F | 4 | L | 17 (geo) | 20200000 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | F | 4 | T | 1 | 20200402 |
| EPI_ISL_743672 | Spike | hCoV-19/Wales/PHWC-4A143E/2020 | F | 4 | M | 1 | 20201209 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | F | 4 | V | 2 (geo) | 20200428 |
| EPI_ISL_763186 | Spike | hCoV-19/Netherlands/UT-EMC-234/2020 | L | 5 | F | 5832 (geo) | 20200000 |
| EPI_ISL_448648 | Spike | hCoV-19/England/OXON-ADF44/2020 | L | 5 | Q | 8 (geo) | 20200000 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | L | 5 | I | 2 (geo) | 20200402 |
| EPI_ISL_677770 | Spike | hCoV-19/Hungary/US-55383w/2020 | L | 5 | S | 1 | 20201002 |
| EPI_ISL_714137 | Spike | hCoV-19/Denmark/DCGC-16216/2020 | L | 5 | P | 1 | 20201116 |
| EPI_ISL_477854 | Spike | hCoV-19/Scotland/CVR2090/2020 | L | 5 | Y | 1 | 20200410 |
| EPI_ISL_649929 | Spike | hCoV-19/England/204742226/2020 | V | 6 | F | 212 (geo) | 20200000 |
| EPI_ISL_678369 | Spike | hCoV-19/Australia/NSW2935/2020 | V | 6 | A | 107 (geo) | 20201006 |
| EPI_ISL_448648 | Spike | hCoV-19/England/OXON-ADF44/2020 | V | 6 | I | 36 (geo) | 20200000 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | V | 6 | L | 3 (geo) | 20200402 |
| EPI_ISL_677770 | Spike | hCoV-19/Hungary/US-55383w/2020 | V | 6 | C | 1 | 20201002 |
| EPI_ISL_565539 | Spike | hCoV-19/Australia/VIC9409/2020 | V | 6 | G | 1 | 20200819 |
| EPI_ISL_477854 | Spike | hCoV-19/Scotland/CVR2090/2020 | V | 6 | Y | 1 | 20200410 |
| EPI_ISL_480882 | Spike | hCoV-19/USA/FL-BPHL-0231/2020 | L | 7 | V | 1 | 20200422 |
| EPI_ISL_763351 | Spike | hCoV-19/Ireland/LK-UHL3/2020 | L | 7 | T | 13 (geo) | 20200401 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | L | 7 | I | 3 (geo) | 20200402 |
| EPI_ISL_482604 | Spike | hCoV-19/India/DL-NCDC5640-CSIR-IGIB/2020 | L | 7 | F | 4 (geo) | 20200525 |
| EPI_ISL_524743 | Spike | hCoV-19/India/GJ-GBRC-383b/2020 | L | 7 | S | 6 (geo) | 20200618 |
| EPI_ISL_540881 | Spike | hCoV-19/Scotland/EDB7738/2020 | L | 8 | S | 2 (geo) | 20200904 |
| EPI_ISL_538723 | Spike | hCoV-19/Spain/CB-IBV-98002802/2020 | L | 8 | F | 47 (geo) | 20200324 |
| EPI_ISL_417183 | Spike | hCoV-19/Hong Kong/HKPU23_2601/2020 | L | 8 | V | 70 (geo) | 20200130 |
| EPI_ISL_420048 | Spike | hCoV-19/France/IDF-2936/2020 | L | 8 | W | 4 (geo) | 20200318 |
| EPI_ISL_448231 | Spike | hCoV-19/England/NORW-E8781/2020 | L | 8 | T | 1 | 20200412 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | L | 8 | Q | 2 (geo) | 20200428 |
| EPI_ISL_671989 | Spike | hCoV-19/Ecuador/UEES-4369/2020 | P | 9 | L | 66 (geo) | 20200000 |
| EPI_ISL_496763 | Spike | hCoV-19/Panama/334038/2020 | P | 9 | T | 12 (geo) | 20200328 |
| EPI_ISL_473494 | Spike | hCoV-19/England/CAMB-1B4AEE/2020 | P | 9 | S | 53 (geo) | 20200000 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | P | 9 | R | 1 | 20200402 |
| EPI_ISL_436446 | Spike | hCoV-19/India/MH-NCDC-3985/2020 | P | 9 | Q | 3 (geo) | 20200409 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | P | 9 | E | 3 (geo) | 20200100 |
| EPI_ISL_743672 | Spike | hCoV-19/Wales/PHWC-4A143E/2020 | P | 9 | V | 1 | 20201209 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | L | 10 | V | 6 (geo) | 20200100 |
| EPI_ISL_763351 | Spike | hCoV-19/Ireland/LK-UHL3/2020 | L | 10 | M | 13 (geo) | 20200401 |
| EPI_ISL_435536 | Spike | hCoV-19/USA/NY-NYUMC471/2020 | L | 10 | I | 13 (geo) | 20200420 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | L | 10 | E | 1 | 20200428 |
| EPI_ISL_591319 | Spike | hCoV-19/Iran/K1r-81/2020 | V | 11 | F | 28 (geo) | 20200400 |
| EPI_ISL_460925 | Spike | hCoV-19/Netherlands/Gelderland_25/2020 | V | 11 | I | 33 (geo) | 20200424 |
| EPI_ISL_545168 | Spike | hCoV-19/USA/TX-HMH-2183/2020 | V | 11 | A | 9 (geo) | 20200520 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | V | 11 | S | 11 (geo) | 20200120 |
| EPI_ISL_763351 | Spike | hCoV-19/Ireland/LK-UHL3/2020 | V | 11 | L | 17 (geo) | 20200401 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | V | 11 | M | 3 (geo) | 20200100 |
| EPI_ISL_548143 | Spike | hCoV-19/New Zealand/20VR3859/2020 | S | 12 | F | 697 (geo) | 20200000 |
| EPI_ISL_691627 | Spike | hCoV-19/Spain/IB-IBV-99010827/2020 | S | 12 | Y | 19 (geo) | 20200813 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | S | 12 | L | 25 (geo) | 20200120 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | S | 12 | K | 3 (geo) | 20200100 |
| EPI_ISL_452809 | Spike | hCoV-19/USA/VA-DCLS-0232/2020 | S | 12 | C | 2 (geo) | 20200401 |
| EPI_ISL_522913 | Spike | hCoV-19/USA/WI-UW-1157/2020 | S | 12 | P | 4 (geo) | 20200811 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | S | 12 | I | 1 | 20201124 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | S | 12 | N | 1 | 20200428 |
| EPI_ISL_448757 | Spike | hCoV-19/England/OXON-AEB12/2020 | S | 13 | I | 901 (geo) | 20200000 |
| EPI_ISL_707950 | Spike | hCoV-19/Germany/SL-SU-10427535/2020 | S | 13 | N | 10 (geo) | 20200316 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | S | 13 | V | 12 (geo) | 20200120 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | S | 13 | L | 16 (geo) | 20200316 |
| EPI_ISL_596382 | Spike | hCoV-19/Iran/K1r-114/2020 | S | 13 | R | 3 (geo) | 20200500 |
| EPI_ISL_485603 | Spike | hCoV-19/Austria/MUV_001/2020 | S | 13 | G | 3 (geo) | 20200414 |
| EPI_ISL_717752 | Spike | hCoV-19/Canada/ON-SLB3245/2020 | S | 13 | C | 1 | 20201124 |
| EPI_ISL_632293 | Spike | hCoV-19/USA/MA-JLL-145N/2020 | Q | 14 | H | 128 (geo) | 20200000 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | Q | 14 | S | 12 (geo) | 20200120 |
| EPI_ISL_420770 | Spike | hCoV-19/England/20142061304/2020 | Q | 14 | R | 12 (geo) | 20200327 |
| EPI_ISL_763351 | Spike | hCoV-19/Ireland/LK-UHL3/2020 | Q | 14 | K | 20 (geo) | 20200401 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | Q | 14 | V | 3 (geo) | 20200316 |
| EPI_ISL_485603 | Spike | hCoV-19/Austria/MUV_001/2020 | Q | 14 | I | 2 (geo) | 20200414 |
| EPI_ISL_806344 | Spike | hCoV-19/Canada/AB-66051/2020 | Q | 14 | E | 1 | 20200330 |
| EPI_ISL_746694 | Spike | hCoV-19/Chile/RM-164804/2020 | Q | 14 | L | 1 | 20200831 |
| EPI_ISL_518710 | Spike | hCoV-19/Australia/VIC5931/2020 | C | 15 | F | 48 (geo) | 20200000 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | C | 15 | V | 13 (geo) | 20200120 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | C | 15 | S | 16 (geo) | 20200316 |
| EPI_ISL_654445 | Spike | hCoV-19/Spain/AR-IBV-98008012/2020 | C | 15 | R | 3 (geo) | 20201001 |
| EPI_ISL_456083 | Spike | hCoV-19/Brazil/RJ-1627/2020 | V | 16 | F | 42 (geo) | 20200403 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | V | 16 | L | 11 (geo) | 20200120 |
| EPI_ISL_492188 | Spike | hCoV-19/England/BRIS-13270F/2020 | V | 16 | I | 6 (geo) | 20200610 |
| EPI_ISL_829957 | Spike | hCoV-19/Iceland/6282/2020 | V | 16 | A | 6 (geo) | 20200814 |
| EPI_ISL_743672 | Spike | hCoV-19/Wales/PHWC-4A143E/2020 | V | 16 | S | 1 | 20201209 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | N | 17 | I | 13 (geo) | 20200120 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | N | 17 | L | 2 (geo) | 20200316 |
| EPI_ISL_494077 | Spike | hCoV-19/Wales/PHWC-166ABE/2020 | N | 17 | Y | 3 (geo) | 20200627 |
| EPI_ISL_704266 | Spike | hCoV-19/England/PORT-2F5619/2020 | N | 17 | D | 3 (geo) | 20200000 |
| EPI_ISL_827045 | Spike | hCoV-19/Iceland/3351/2020 | N | 17 | S | 1 | 20200925 |
| EPI_ISL_468420 | Spike | hCoV-19/USA/CA-CZB-1459/2020 | N | 17 | K | 4 (geo) | 20200419 |
| EPI_ISL_735657 | Spike | hCoV-19/England/MILK-C61238/2020 | N | 17 | T | 4 (geo) | 20201213 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | N | 17 | F | 1 | 20201106 |
| EPI_ISL_705553 | Spike | hCoV-19/England/CAMB-1BC98F/2020 | L | 18 | F | 42578 (geo) | 20200000 |
| EPI_ISL_437336 | Spike | hCoV-19/Taiwan/TSGH-25/2020 | L | 18 | S | 6 (geo) | 20200322 |
| EPI_ISL_854885 | Spike | hCoV-19/USA/MA-QDX-2929/2021 | L | 18 | R | 1 | 20210104 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | L | 18 | I | 7 (geo) | 20200316 |
| EPI_ISL_582016 | Spike | hCoV-19/Iran/SA-Isf-70/2020 | L | 18 | P | 1 | 20200804 |
| EPI_ISL_437336 | Spike | hCoV-19/Taiwan/TSGH-25/2020 | T | 19 | Y | 6 (geo) | 20200322 |
| EPI_ISL_462265 | Spike | hCoV-19/Belgium/MT-0322411/2020 | T | 19 | I | 118 (geo) | 20200322 |
| EPI_ISL_453133 | Spike | hCoV-19/Scotland/EDB4716/2020 | T | 19 | K | 108 (geo) | 20200427 |
| EPI_ISL_672011 | Spike | hCoV-19/Ecuador/UEES-7332/2020 | T | 19 | R | 14 (geo) | 20200000 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | T | 19 | Q | 11 (geo) | 20200120 |
| EPI_ISL_763351 | Spike | hCoV-19/Ireland/LK-UHL3/2020 | T | 19 | N | 13 (geo) | 20200401 |
| EPI_ISL_653270 | Spike | hCoV-19/USA/FL-BPHL-2117/2020 | T | 19 | S | 2 (geo) | 20200311 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | T | 19 | L | 2 (geo) | 20200316 |
| EPI_ISL_470255 | Spike | hCoV-19/England/CAMB-1AB31C/2020 | T | 19 | P | 1 | 20200419 |
| EPI_ISL_609044 | Spike | hCoV-19/England/MILK-A6C2D5/2020 | T | 19 | A | 4 (geo) | 20201008 |
| EPI_ISL_722358 | Spike | hCoV-19/Netherlands/NB-EMC-408/2020 | T | 20 | I | 485 (geo) | 20200000 |
| EPI_ISL_437336 | Spike | hCoV-19/Taiwan/TSGH-25/2020 | T | 20 | N | 43 (geo) | 20200322 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | T | 20 | P | 16 (geo) | 20200120 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | T | 20 | Q | 2 (geo) | 20200316 |
| EPI_ISL_508399 | Spike | hCoV-19/India/WB-IK77/2020 | T | 20 | A | 3 (geo) | 20200519 |
| EPI_ISL_455325 | Spike | hCoV-19/Spain/CN-ISCIII-201811/2020 | T | 20 | S | 2 (geo) | 20200305 |
| EPI_ISL_627142 | Spike | hCoV-19/England/NORW-F01D3/2020 | R | 21 | I | 1809 (geo) | 20200000 |
| EPI_ISL_437336 | Spike | hCoV-19/Taiwan/TSGH-25/2020 | R | 21 | Q | 6 (geo) | 20200322 |
| EPI_ISL_444569 | Spike | hCoV-19/USA/IL-NM074/2020 | R | 21 | T | 84 (geo) | 20200316 |
| EPI_ISL_679337 | Spike | hCoV-19/England/EXET-139D15/2020 | R | 21 | K | 124 (geo) | 20200000 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | R | 21 | E | 12 (geo) | 20200120 |
| EPI_ISL_730266 | Spike | hCoV-19/Jordan/AM-ALSR-4993/2020 | R | 21 | G | 19 (geo) | 20201006 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | R | 21 | P | 2 (geo) | 20200316 |
| EPI_ISL_485183 | Spike | hCoV-19/USA/LA-GBCL-26556546/2020 | R | 21 | S | 4 (geo) | 20200415 |
| EPI_ISL_857336 | Spike | hCoV-19/Egypt/CUNCI-HGC9I036/2020 | R | 21 | N | 1 | 20201225 |
| EPI_ISL_854107 | Spike | hCoV-19/Austria/CeMM1690/2020 | T | 22 | I | 375 (geo) | 20200000 |
| EPI_ISL_437336 | Spike | hCoV-19/Taiwan/TSGH-25/2020 | T | 22 | N | 93 (geo) | 20200322 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | T | 22 | L | 12 (geo) | 20200120 |
| EPI_ISL_791541 | Spike | hCoV-19/USA/MA-MASPHL-00037/2020 | T | 22 | P | 10 (geo) | 20200402 |
| EPI_ISL_450461 | Spike | hCoV-19/USA/CA-CZB-1212/2020 | T | 22 | A | 12 (geo) | 20200323 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | T | 22 | E | 2 (geo) | 20200316 |
| EPI_ISL_606179 | Spike | hCoV-19/England/ALDP-A865BE/2020 | T | 22 | S | 1 | 20201016 |
| EPI_ISL_478196 | Spike | hCoV-19/Scotland/EDB5274/2020 | T | 22 | H | 2 (geo) | 20200519 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | T | 22 | F | 1 | 20201106 |
| EPI_ISL_653214 | Spike | hCoV-19/USA/FL-BPHL-2061/2020 | Q | 23 | R | 21 (geo) | 20200611 |
| EPI_ISL_864842 | Spike | hCoV-19/England/CAMB-A9C3CA/2020 | Q | 23 | H | 801 (geo) | 20200000 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | Q | 23 | N | 12 (geo) | 20200120 |
| EPI_ISL_445131 | Spike | hCoV-19/USA/LA-SR0276/2020 | Q | 23 | K | 11 (geo) | 20200331 |
| EPI_ISL_437336 | Spike | hCoV-19/Taiwan/TSGH-25/2020 | Q | 23 | S | 5 (geo) | 20200322 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | Q | 23 | L | 10 (geo) | 20200316 |
| EPI_ISL_796018 | Spike | hCoV-19/Hebei/IVDC-04-01/2021 | Q | 23 | Y | 1 | 20210103 |
| EPI_ISL_579265 | Spike | hCoV-19/New Zealand/20VR2519/2020 | L | 24 | S | 20 (geo) | 20200000 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | L | 24 | Y | 12 (geo) | 20200120 |
| EPI_ISL_437336 | Spike | hCoV-19/Taiwan/TSGH-25/2020 | L | 24 | I | 5 (geo) | 20200322 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | L | 24 | N | 2 (geo) | 20200316 |
| EPI_ISL_792555 | Spike | hCoV-19/Sri Lanka/ECB1/2021 | L | 24 | R | 1 | 20210102 |
| EPI_ISL_664568 | Spike | hCoV-19/England/CAMB-1B95BB/2020 | L | 24 | V | 7 (geo) | 20201104 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | L | 24 | D | 1 | 20201106 |
| EPI_ISL_690618 | Spike | hCoV-19/Japan/PG-2570/2020 | L | 24 | F | 1 | 20200600 |
| EPI_ISL_733585 | Spike | hCoV-19/England/C200027424/2020 | P | 25 | S | 449 (geo) | 20200000 |
| EPI_ISL_417443 | Spike | hCoV-19/Hong Kong/XM-PII-S4/2020 | P | 25 | L | 116 (geo) | 20200122 |
| EPI_ISL_603837 | Spike | hCoV-19/USA/MA-QDX-1505/2020 | P | 25 | T | 28 (geo) | 20200317 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | P | 25 | Y | 2 (geo) | 20200316 |
| EPI_ISL_796018 | Spike | hCoV-19/Hebei/IVDC-04-01/2021 | P | 25 | V | 1 | 20210103 |
| EPI_ISL_819653 | Spike | hCoV-19/England/OXON-F41ABB/2020 | P | 25 | H | 2 (geo) | 20201216 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | P | 26 | L | 451 (geo) | 20200120 |
| EPI_ISL_472379 | Spike | hCoV-19/England/NORW-ED6F8/2020 | P | 26 | S | 756 (geo) | 20200000 |
| EPI_ISL_452509 | Spike | hCoV-19/Spain/RI-IBV-001392/2020 | P | 26 | H | 36 (geo) | 20200317 |
| EPI_ISL_469445 | Spike | hCoV-19/England/BRIS-12C2BC/2020 | P | 26 | R | 5 (geo) | 20200511 |
| EPI_ISL_707905 | Spike | hCoV-19/USA/CA-LACPHL-AE00004/2020 | P | 26 | T | 4 (geo) | 20200616 |
| EPI_ISL_759758 | Spike | hCoV-19/USA/WI-UW-2484/2020 | P | 26 | Y | 7 (geo) | 20201202 |
| EPI_ISL_593401 | Spike | hCoV-19/Australia/VIC15660/2020 | P | 26 | F | 1 | 20200730 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | P | 26 | Q | 1 | 20201106 |
| EPI_ISL_480692 | Spike | hCoV-19/Australia/NT44/2020 | A | 27 | S | 387 (geo) | 20200000 |
| EPI_ISL_605146 | Spike | hCoV-19/Ireland/CO-NVRL-20G32225/2020 | A | 27 | T | 84 (geo) | 20200317 |
| EPI_ISL_741696 | Spike | hCoV-19/England/PORT-2D5318/2020 | A | 27 | V | 171 (geo) | 20200000 |
| EPI_ISL_660724 | Spike | hCoV-19/France/OCC-SC555/2020 | A | 27 | E | 3 (geo) | 20200404 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | A | 27 | H | 7 (geo) | 20200309 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | A | 27 | L | 2 (geo) | 20200316 |
| EPI_ISL_739519 | Spike | hCoV-19/USA/CA-CZB-13920/2020 | A | 27 | P | 3 (geo) | 20200806 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | A | 27 | Q | 1 | 20200120 |
| EPI_ISL_707705 | Spike | hCoV-19/England/204961140/2020 | A | 27 | C | 2 (geo) | 20201203 |
| EPI_ISL_636750 | Spike | hCoV-19/India/UT-67177-CSIR-IGIB/2020 | A | 27 | K | 2 (geo) | 20200809 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | A | 27 | F | 1 | 20201106 |
| EPI_ISL_582609 | Spike | hCoV-19/United Arab Emirates/skmc-0381517/2020 | Y | 28 | H | 179 (geo) | 20200207 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | Y | 28 | T | 7 (geo) | 20200309 |
| EPI_ISL_496677 | Spike | hCoV-19/Panama/330961/2020 | Y | 28 | F | 3 (geo) | 20200319 |
| EPI_ISL_480692 | Spike | hCoV-19/Australia/NT44/2020 | Y | 28 | L | 6 (geo) | 20200000 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | Y | 28 | N | 4 (geo) | 20200510 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | Y | 28 | I | 2 (geo) | 20200120 |
| EPI_ISL_511947 | Spike | hCoV-19/India/KA-IB56/2020 | Y | 28 | D | 1 | 20200619 |
| EPI_ISL_869064 | Spike | hCoV-19/England/TFCI-26FFE77/2021 | Y | 28 | C | 1 | 20210101 |
| EPI_ISL_447986 | Spike | hCoV-19/England/CAMB-1AD2B3/2020 | T | 29 | I | 600 (geo) | 20200000 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | T | 29 | L | 7 (geo) | 20200309 |
| EPI_ISL_480692 | Spike | hCoV-19/Australia/NT44/2020 | T | 29 | R | 6 (geo) | 20200000 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | T | 29 | S | 4 (geo) | 20200120 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | T | 29 | P | 2 (geo) | 20200510 |
| EPI_ISL_470012 | Spike | hCoV-19/Scotland/GCVR-172509/2020 | T | 29 | A | 7 (geo) | 20200330 |
| EPI_ISL_582013 | Spike | hCoV-19/Iran/SA-Isf-64/2020 | T | 29 | Q | 1 | 20200510 |
| EPI_ISL_465707 | Spike | hCoV-19/England/20186083304/2020 | T | 29 | N | 2 (geo) | 20200428 |
| EPI_ISL_578321 | Spike | hCoV-19/Ireland/WD-NVRL-20ILR05743/2020 | N | 30 | S | 28 (geo) | 20200817 |
| EPI_ISL_479290 | Spike | hCoV-19/Wales/PHWC-160164/2020 | N | 30 | T | 11 (geo) | 20200519 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | N | 30 | I | 9 (geo) | 20200309 |
| EPI_ISL_649096 | Spike | hCoV-19/Israel/CVL-n2440/2020 | N | 30 | H | 4 (geo) | 20200307 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | N | 30 | L | 3 (geo) | 20200316 |
| EPI_ISL_802251 | Spike | hCoV-19/USA/NY-MSHSPSP-PV17860/2020 | N | 30 | K | 9 (geo) | 20200914 |
| EPI_ISL_496899 | Spike | hCoV-19/Panama/339755/2020 | N | 30 | D | 2 (geo) | 20200412 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | N | 30 | Q | 1 | 20201106 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | S | 31 | L | 7 (geo) | 20200309 |
| EPI_ISL_484198 | Spike | hCoV-19/England/GSTT-265E3FF/2020 | S | 31 | F | 12 (geo) | 20200326 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | S | 31 | I | 2 (geo) | 20200316 |
| EPI_ISL_465905 | Spike | hCoV-19/England/20142005704/2020 | S | 31 | P | 1 | 20200330 |
| EPI_ISL_539531 | Spike | hCoV-19/Spain/CN-ISCIII-201048/2020 | F | 32 | L | 51 (geo) | 20200224 |
| EPI_ISL_455322 | Spike | hCoV-19/Spain/AN-ISCIII-201623/2020 | F | 32 | Y | 6 (geo) | 20200305 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | F | 32 | S | 7 (geo) | 20200309 |
| EPI_ISL_412900 | Spike | hCoV-19/Wuhan/HBCDC-HB-04/2019 | F | 32 | V | 2 (geo) | 20191230 |
| EPI_ISL_402132 | Spike | hCoV-19/Wuhan/HBCDC-HB-01/2019 | F | 32 | I | 2 (geo) | 20191230 |
| EPI_ISL_490423 | Spike | hCoV-19/England/LOND-124C6B6/2020 | T | 33 | I | 126 (geo) | 20200000 |
| EPI_ISL_578663 | Spike | hCoV-19/USA/WI-WSLH-200523/2020 | T | 33 | K | 62 (geo) | 20200527 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | T | 33 | H | 6 (geo) | 20200309 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | T | 33 | S | 4 (geo) | 20200316 |
| EPI_ISL_526361 | Spike | hCoV-19/England/ALDP-9823F5/2020 | T | 33 | A | 7 (geo) | 20200809 |
| EPI_ISL_602420 | Spike | hCoV-19/Russia/DA-RII-MH2742S/2020 | T | 33 | R | 1 | 20200923 |
| EPI_ISL_871878 | Spike | hCoV-19/USA/WY-WPHL-21002967/2021 | T | 33 | F | 1 | 20210108 |
| EPI_ISL_746959 | Spike | hCoV-19/USA/UT-UPHL-2012057649/2020 | T | 33 | V | 1 | 20201201 |
| EPI_ISL_632461 | Spike | hCoV-19/Netherlands/UT-EMC-105/2020 | R | 34 | L | 15 (geo) | 20200928 |
| EPI_ISL_483481 | Spike | hCoV-19/USA/CA-ALSR-1045-SAN/2020 | R | 34 | C | 6 (geo) | 20200621 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | R | 34 | V | 6 (geo) | 20200309 |
| EPI_ISL_476515 | Spike | hCoV-19/Senegal/63766/2020 | R | 34 | P | 3 (geo) | 20200612 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | R | 34 | H | 5 (geo) | 20200316 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | G | 35 | V | 66 (geo) | 20200309 |
| EPI_ISL_850543 | Spike | hCoV-19/USA/FL-CDC-STM-A014/2021 | G | 35 | C | 1 | 20210102 |
| EPI_ISL_676686 | Spike | hCoV-19/USA/NY-Wadsworth-46244-01/2020 | G | 35 | R | 4 (geo) | 20200411 |
| EPI_ISL_660731 | Spike | hCoV-19/France/OCC-SC565/2020 | V | 36 | I | 25 (geo) | 20200519 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | V | 36 | F | 15 (geo) | 20200309 |
| EPI_ISL_496827 | Spike | hCoV-19/Panama/335925/2020 | V | 36 | S | 1 | 20200403 |
| EPI_ISL_610838 | Spike | hCoV-19/England/CAMC-A8300B/2020 | V | 36 | L | 1 | 20201013 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | Y | 37 | I | 7 (geo) | 20200309 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | Y | 37 | F | 2 (geo) | 20200316 |
| EPI_ISL_582016 | Spike | hCoV-19/Iran/SA-Isf-70/2020 | Y | 37 | N | 2 (geo) | 20200804 |
| EPI_ISL_479662 | Spike | hCoV-19/South Korea/CNUHV03/2020 | Y | 38 | C | 1 | 20200311 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | Y | 38 | T | 7 (geo) | 20200309 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | Y | 38 | I | 1 | 20200316 |
| EPI_ISL_479549 | Spike | hCoV-19/India/MH-NIV-46303/2020 | Y | 38 | G | 1 | 20200526 |
| EPI_ISL_558271 | Spike | hCoV-19/England/MILK-598554/2020 | Y | 38 | H | 1 | 20200611 |
| EPI_ISL_539532 | Spike | hCoV-19/Spain/CN-ISCIII-201810/2020 | P | 39 | L | 9 (geo) | 20200306 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | P | 39 | T | 1 | 20200316 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | P | 39 | S | 1 | 20201023 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | P | 39 | Q | 1 | 20201222 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | D | 40 | T | 8 (geo) | 20200309 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | D | 40 | L | 2 (geo) | 20200316 |
| EPI_ISL_776350 | Spike | hCoV-19/Germany/HH-hpi-p2087/2020 | D | 40 | E | 4 (geo) | 20200320 |
| EPI_ISL_703838 | Spike | hCoV-19/England/QEUH-BC3781/2020 | D | 40 | N | 1 | 20201125 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | D | 40 | S | 1 | 20201222 |
| EPI_ISL_721412 | Spike | hCoV-19/England/ALDP-BC6214/2020 | K | 41 | E | 2 (geo) | 20201122 |
| EPI_ISL_848527 | Spike | hCoV-19/USA/IL-IDPH-I-000682/2020 | K | 41 | R | 5 (geo) | 20201124 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | K | 41 | T | 1 | 20200316 |
| EPI_ISL_479549 | Spike | hCoV-19/India/MH-NIV-46303/2020 | K | 41 | S | 1 | 20200526 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | K | 41 | Q | 2 (geo) | 20200510 |
| EPI_ISL_791753 | Spike | hCoV-19/USA/MA-MGH-00762/2020 | K | 41 | I | 4 (geo) | 20200411 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | K | 41 | V | 1 | 20201023 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | K | 41 | F | 1 | 20201222 |
| EPI_ISL_496782 | Spike | hCoV-19/Panama/334475/2020 | K | 41 | N | 1 | 20200330 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | V | 42 | F | 10 (geo) | 20200309 |
| EPI_ISL_591317 | Spike | hCoV-19/Iran/K1r-85/2020 | V | 42 | L | 5 (geo) | 20200400 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | V | 42 | K | 1 | 20200316 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | V | 42 | I | 12 (geo) | 20200324 |
| EPI_ISL_479549 | Spike | hCoV-19/India/MH-NIV-46303/2020 | V | 42 | Y | 1 | 20200526 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | V | 42 | S | 1 | 20201023 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | V | 42 | Q | 1 | 20201222 |
| EPI_ISL_591063 | Spike | hCoV-19/Iran/SA-Isf-8/2020 | V | 42 | A | 1 | 20200510 |
| EPI_ISL_429665 | Spike | hCoV-19/Brazil/MG-CV2/2020 | F | 43 | L | 4 (geo) | 20200308 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | F | 43 | S | 7 (geo) | 20200309 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | F | 43 | G | 2 (geo) | 20200416 |
| EPI_ISL_454724 | Spike | hCoV-19/USA/UT-02001/2020 | F | 43 | Y | 1 | 20200417 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | F | 43 | R | 4 (geo) | 20200324 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | F | 43 | V | 1 | 20201023 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | F | 43 | I | 1 | 20201222 |
| EPI_ISL_572364 | Spike | hCoV-19/Brazil/PE-IAM959/2020 | F | 43 | C | 1 | 20200503 |
| EPI_ISL_451768 | Spike | hCoV-19/Switzerland/AG-ETHZ-100819/2020 | R | 44 | K | 7 (geo) | 20200326 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | R | 44 | D | 6 (geo) | 20200309 |
| EPI_ISL_448648 | Spike | hCoV-19/England/OXON-ADF44/2020 | R | 44 | N | 8 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | R | 44 | I | 4 (geo) | 20200416 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | R | 44 | S | 1 | 20200316 |
| EPI_ISL_479549 | Spike | hCoV-19/India/MH-NIV-46303/2020 | R | 44 | W | 1 | 20200526 |
| EPI_ISL_672597 | Spike | hCoV-19/Iran/SA-Isf-45/2020 | R | 44 | T | 2 (geo) | 20200615 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | R | 44 | L | 2 (geo) | 20201023 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | S | 45 | P | 14 (geo) | 20200309 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | S | 45 | L | 2 (geo) | 20200416 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | S | 45 | D | 1 | 20200316 |
| EPI_ISL_454724 | Spike | hCoV-19/USA/UT-02001/2020 | S | 45 | V | 1 | 20200417 |
| EPI_ISL_787635 | Spike | hCoV-19/USA/TX-HMH-MCoV-14350/2020 | S | 45 | Y | 1 | 20201007 |
| EPI_ISL_734571 | Spike | hCoV-19/Belgium/rega-0413579/2020 | S | 45 | F | 4 (geo) | 20200413 |
| EPI_ISL_610512 | Spike | hCoV-19/England/ALDP-A85142/2020 | S | 45 | A | 1 | 20201016 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | S | 45 | I | 1 | 20201023 |
| EPI_ISL_444585 | Spike | hCoV-19/USA/IL-NM097/2020 | S | 46 | A | 13 (geo) | 20200315 |
| EPI_ISL_444838 | Spike | hCoV-19/Denmark/ALAB-SSI-1268/2020 | S | 46 | L | 19 (geo) | 20200309 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | S | 46 | Q | 6 (geo) | 20200309 |
| EPI_ISL_448648 | Spike | hCoV-19/England/OXON-ADF44/2020 | S | 46 | G | 8 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | S | 46 | T | 3 (geo) | 20200416 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | S | 46 | P | 3 (geo) | 20200316 |
| EPI_ISL_454724 | Spike | hCoV-19/USA/UT-02001/2020 | S | 46 | E | 1 | 20200417 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | S | 46 | F | 1 | 20201222 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | V | 47 | I | 34 (geo) | 20200416 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | V | 47 | L | 2 (geo) | 20200327 |
| EPI_ISL_620137 | Spike | hCoV-19/Denmark/DCGC-1761/2020 | V | 47 | F | 16 (geo) | 20200309 |
| EPI_ISL_565913 | Spike | hCoV-19/Spain/AN-IBV-98001998/2020 | V | 47 | Q | 2 (geo) | 20200316 |
| EPI_ISL_708814 | Spike | hCoV-19/Thailand/Bangkok-Sha06/2020 | V | 47 | A | 2 (geo) | 20201009 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | V | 47 | T | 1 | 20201222 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | V | 47 | P | 2 (geo) | 20200324 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | L | 48 | Y | 6 (geo) | 20200324 |
| EPI_ISL_677707 | Spike | hCoV-19/North Macedonia/3515/2020 | L | 48 | S | 2 (geo) | 20200615 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | L | 48 | P | 1 | 20201023 |
| EPI_ISL_423758 | Spike | hCoV-19/England/20132024604/2020 | L | 48 | F | 2 (geo) | 20200322 |
| EPI_ISL_430632 | Spike | hCoV-19/Australia/NT29/2020 | H | 49 | Y | 1041 (geo) | 20200000 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | H | 49 | I | 7 (geo) | 20200324 |
| EPI_ISL_430060 | Spike | hCoV-19/USA/UT-0514/2020 | H | 49 | T | 4 (geo) | 20200403 |
| EPI_ISL_479549 | Spike | hCoV-19/India/MH-NIV-46303/2020 | H | 49 | C | 1 | 20200526 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | H | 49 | R | 1 | 20201106 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | H | 49 | L | 3 (geo) | 20200324 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | H | 49 | E | 1 | 20201023 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | H | 49 | N | 1 | 20201222 |
| EPI_ISL_622202 | Spike | hCoV-19/Denmark/DCGC-1735/2020 | S | 50 | N | 3 (geo) | 20200323 |
| EPI_ISL_854102 | Spike | hCoV-19/Austria/CeMM1683/2020 | S | 50 | T | 5 (geo) | 20200000 |
| EPI_ISL_461539 | Spike | hCoV-19/England/BIRM-5FF50/2020 | S | 50 | L | 90 (geo) | 20200000 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | S | 50 | Q | 6 (geo) | 20200324 |
| EPI_ISL_454724 | Spike | hCoV-19/USA/UT-02001/2020 | S | 50 | C | 1 | 20200417 |
| EPI_ISL_591374 | Spike | hCoV-19/Japan/IC-0030/2020 | S | 50 | P | 2 (geo) | 20200500 |
| EPI_ISL_413696 | Spike | hCoV-19/China/WF0009/2020 | S | 50 | Y | 1 | 20200100 |
| EPI_ISL_737086 | Spike | hCoV-19/USA/WA-UW-32753/2020 | S | 50 | K | 1 | 20201019 |
| EPI_ISL_854067 | Spike | hCoV-19/Austria/CeMM1637/2020 | T | 51 | I | 266 (geo) | 20200000 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | T | 51 | N | 3 (geo) | 20200327 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | T | 51 | R | 3 (geo) | 20200416 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | T | 51 | L | 6 (geo) | 20200324 |
| EPI_ISL_546881 | Spike | hCoV-19/USA/TX-HMH-7598/2020 | T | 51 | A | 4 (geo) | 20200625 |
| EPI_ISL_521337 | Spike | hCoV-19/Australia/VIC6571/2020 | T | 51 | G | 2 (geo) | 20200717 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | T | 51 | C | 1 | 20201106 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | T | 51 | E | 2 (geo) | 20200511 |
| EPI_ISL_572364 | Spike | hCoV-19/Brazil/PE-IAM959/2020 | T | 51 | S | 1 | 20200503 |
| EPI_ISL_458686 | Spike | hCoV-19/England/NORT-28910A/2020 | Q | 52 | L | 50 (geo) | 20200327 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | Q | 52 | R | 54 (geo) | 20200324 |
| EPI_ISL_741669 | Spike | hCoV-19/England/PORT-2D4FBB/2020 | Q | 52 | H | 79 (geo) | 20200000 |
| EPI_ISL_454724 | Spike | hCoV-19/USA/UT-02001/2020 | Q | 52 | K | 4 (geo) | 20200417 |
| EPI_ISL_496782 | Spike | hCoV-19/Panama/334475/2020 | Q | 52 | E | 4 (geo) | 20200330 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | Q | 52 | I | 3 (geo) | 20200324 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | Q | 52 | S | 1 | 20201106 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | Q | 52 | Y | 1 | 20201023 |
| EPI_ISL_413696 | Spike | hCoV-19/China/WF0009/2020 | Q | 52 | M | 1 | 20200100 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | D | 53 | E | 1 | 20200327 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | D | 53 | V | 3 (geo) | 20200416 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | D | 53 | T | 6 (geo) | 20200324 |
| EPI_ISL_721752 | Spike | hCoV-19/Switzerland/BE-ETHZ-340155/2020 | D | 53 | N | 1 | 20201028 |
| EPI_ISL_790645 | Spike | hCoV-19/Netherlands/FL-RIVM-20560/2020 | D | 53 | G | 3 (geo) | 20201215 |
| EPI_ISL_521337 | Spike | hCoV-19/Australia/VIC6571/2020 | D | 53 | L | 1 | 20200717 |
| EPI_ISL_496782 | Spike | hCoV-19/Panama/334475/2020 | D | 53 | Y | 2 (geo) | 20200330 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | D | 53 | P | 1 | 20201023 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | D | 53 | I | 2 (geo) | 20200511 |
| EPI_ISL_472372 | Spike | hCoV-19/England/NORW-ED4EF/2020 | L | 54 | F | 1504 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | L | 54 | V | 2 (geo) | 20200416 |
| EPI_ISL_429620 | Spike | hCoV-19/USA/WA-UW-4749/2020 | L | 54 | W | 1 | 20200328 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | L | 54 | C | 4 (geo) | 20200324 |
| EPI_ISL_521337 | Spike | hCoV-19/Australia/VIC6571/2020 | L | 54 | T | 1 | 20200717 |
| EPI_ISL_429620 | Spike | hCoV-19/USA/WA-UW-4749/2020 | F | 55 | I | 5 (geo) | 20200328 |
| EPI_ISL_825942 | Spike | hCoV-19/Canada/Qc-CHUM-2013203919A/2020 | F | 55 | Y | 2 (geo) | 20200511 |
| EPI_ISL_448648 | Spike | hCoV-19/England/OXON-ADF44/2020 | F | 55 | V | 7 (geo) | 20200000 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | F | 55 | S | 5 (geo) | 20200324 |
| EPI_ISL_779704 | Spike | hCoV-19/Italy/LOM-UniMI05/2020 | F | 55 | L | 7 (geo) | 20200224 |
| EPI_ISL_461433 | Spike | hCoV-19/USA/WA-UW-5011/2020 | F | 55 | C | 1 | 20200407 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | F | 55 | H | 1 | 20201023 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | F | 55 | T | 1 | 20201222 |
| EPI_ISL_735476 | Spike | hCoV-19/USA/WA-UW-31409/2020 | F | 55 | N | 1 | 20201014 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | L | 56 | I | 2 (geo) | 20200416 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | L | 56 | Y | 4 (geo) | 20200324 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | L | 56 | M | 3 (geo) | 20200324 |
| EPI_ISL_872001 | Spike | hCoV-19/USA/WY-WPHL-21001748/2021 | L | 56 | D | 1 | 20210105 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | L | 56 | F | 2 (geo) | 20201106 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | L | 56 | T | 1 | 20201023 |
| EPI_ISL_448648 | Spike | hCoV-19/England/OXON-ADF44/2020 | P | 57 | T | 9 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | P | 57 | I | 3 (geo) | 20200416 |
| EPI_ISL_474990 | Spike | hCoV-19/Israel/CVL-n-9434/2020 | P | 57 | S | 7 (geo) | 20200419 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | P | 57 | L | 12 (geo) | 20200324 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | F | 58 | T | 2 (geo) | 20200416 |
| EPI_ISL_833534 | Spike | hCoV-19/Italy/CAM-TIGEM-920/2020 | F | 58 | V | 1 | 20200501 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | F | 58 | S | 6 (geo) | 20200324 |
| EPI_ISL_493759 | Spike | hCoV-19/Scotland/CVR2051/2020 | F | 58 | Y | 2 (geo) | 20200409 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | F | 58 | L | 6 (geo) | 20200324 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | F | 58 | H | 1 | 20200428 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | F | 58 | M | 1 | 20201106 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | F | 58 | I | 1 | 20201023 |
| EPI_ISL_756003 | Spike | hCoV-19/Finland/4LS21F5/2020 | F | 59 | Y | 104 (geo) | 20200808 |
| EPI_ISL_448648 | Spike | hCoV-19/England/OXON-ADF44/2020 | F | 59 | L | 15 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | F | 59 | C | 3 (geo) | 20200416 |
| EPI_ISL_524724 | Spike | hCoV-19/India/GJ-GBRC-368b/2020 | F | 59 | S | 20 (geo) | 20200618 |
| EPI_ISL_436362 | Spike | hCoV-19/Spain/VC-FISABIO-267/2020 | F | 59 | V | 2 (geo) | 20200317 |
| EPI_ISL_596382 | Spike | hCoV-19/Iran/K1r-114/2020 | F | 59 | I | 2 (geo) | 20200500 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | F | 59 | Q | 1 | 20201222 |
| EPI_ISL_478978 | Spike | hCoV-19/England/OXON-B0F20/2020 | S | 60 | F | 4 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | S | 60 | I | 3 (geo) | 20200416 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | S | 60 | P | 5 (geo) | 20200324 |
| EPI_ISL_493759 | Spike | hCoV-19/Scotland/CVR2051/2020 | S | 60 | L | 3 (geo) | 20200409 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | S | 60 | R | 2 (geo) | 20200428 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | S | 60 | K | 3 (geo) | 20200324 |
| EPI_ISL_872001 | Spike | hCoV-19/USA/WY-WPHL-21001748/2021 | S | 60 | G | 1 | 20210105 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | S | 60 | C | 1 | 20201222 |
| EPI_ISL_478978 | Spike | hCoV-19/England/OXON-B0F20/2020 | N | 61 | Q | 3 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | N | 61 | D | 3 (geo) | 20200416 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | N | 61 | M | 4 (geo) | 20200324 |
| EPI_ISL_493759 | Spike | hCoV-19/Scotland/CVR2051/2020 | N | 61 | L | 2 (geo) | 20200409 |
| EPI_ISL_610158 | Spike | hCoV-19/Indonesia/YO-UGM-109424/2020 | N | 61 | Y | 2 (geo) | 20200826 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | N | 61 | S | 3 (geo) | 20200324 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | N | 61 | T | 1 | 20200428 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | N | 61 | G | 1 | 20201106 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | N | 61 | H | 1 | 20201023 |
| EPI_ISL_739844 | Spike | hCoV-19/Luxembourg/LNS0876336/2020 | N | 61 | K | 1 | 20201103 |
| EPI_ISL_493759 | Spike | hCoV-19/Scotland/CVR2051/2020 | V | 62 | I | 44 (geo) | 20200409 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | V | 62 | A | 3 (geo) | 20200228 |
| EPI_ISL_478978 | Spike | hCoV-19/England/OXON-B0F20/2020 | V | 62 | F | 4 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | V | 62 | C | 6 (geo) | 20200416 |
| EPI_ISL_613429 | Spike | hCoV-19/Saint Barthelemy/IPG-7329/2020 | V | 62 | L | 30 (geo) | 20200313 |
| EPI_ISL_552306 | Spike | hCoV-19/England/MILK-993B35/2020 | V | 62 | K | 1 | 20200827 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | V | 62 | S | 1 | 20201106 |
| EPI_ISL_511924 | Spike | hCoV-19/India/MH-MW22/2020 | V | 62 | G | 1 | 20200515 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | T | 63 | L | 7 (geo) | 20200324 |
| EPI_ISL_552306 | Spike | hCoV-19/England/MILK-993B35/2020 | T | 63 | V | 3 (geo) | 20200827 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | T | 63 | N | 6 (geo) | 20200324 |
| EPI_ISL_833183 | Spike | hCoV-19/Spain/GA-CHUVI-19120216/2020 | T | 63 | Y | 1 | 20201228 |
| EPI_ISL_749514 | Spike | hCoV-19/Denmark/DCGC-18509/2020 | T | 63 | A | 2 (geo) | 20201207 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | T | 63 | S | 1 | 20200428 |
| EPI_ISL_707701 | Spike | hCoV-19/England/204640983/2020 | T | 63 | M | 1 | 20201106 |
| EPI_ISL_442963 | Spike | hCoV-19/England/CAMB-7EB75/2020 | T | 63 | I | 2 (geo) | 20200407 |
| EPI_ISL_511700 | Spike | hCoV-19/Portugal/PT1153/2020 | T | 63 | K | 1 | 20200425 |
| EPI_ISL_819307 | Spike | hCoV-19/Spain/CT-HUVH-16634/2020 | W | 64 | L | 35 (geo) | 20200323 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | W | 64 | C | 131 (geo) | 20200510 |
| EPI_ISL_664583 | Spike | hCoV-19/England/CAMB-1BA1D4/2020 | W | 64 | R | 24 (geo) | 20200000 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | W | 64 | G | 11 (geo) | 20200324 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | W | 64 | Y | 2 (geo) | 20200428 |
| EPI_ISL_792555 | Spike | hCoV-19/Sri Lanka/ECB1/2021 | W | 64 | M | 1 | 20210102 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | W | 64 | F | 3 (geo) | 20200324 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | W | 64 | P | 1 | 20201222 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | F | 65 | S | 10 (geo) | 20200324 |
| EPI_ISL_552306 | Spike | hCoV-19/England/MILK-993B35/2020 | F | 65 | V | 2 (geo) | 20200827 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | F | 65 | L | 4 (geo) | 20200428 |
| EPI_ISL_582013 | Spike | hCoV-19/Iran/SA-Isf-64/2020 | F | 65 | I | 3 (geo) | 20200510 |
| EPI_ISL_625683 | Spike | hCoV-19/Iran/9GS/2020 | F | 65 | A | 1 | 20200920 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | F | 65 | C | 1 | 20201222 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | F | 65 | N | 3 (geo) | 20200324 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | H | 66 | L | 7 (geo) | 20200416 |
| EPI_ISL_763351 | Spike | hCoV-19/Ireland/LK-UHL3/2020 | H | 66 | V | 13 (geo) | 20200401 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | H | 66 | M | 4 (geo) | 20200324 |
| EPI_ISL_480693 | Spike | hCoV-19/Australia/NT45/2020 | H | 66 | Y | 4 (geo) | 20200000 |
| EPI_ISL_604075 | Spike | hCoV-19/USA/MN-QDX-1733/2020 | H | 66 | R | 10 (geo) | 20200316 |
| EPI_ISL_577086 | Spike | hCoV-19/England/MILK-9E178F/2020 | H | 66 | P | 3 (geo) | 20200918 |
| EPI_ISL_552306 | Spike | hCoV-19/England/MILK-993B35/2020 | H | 66 | E | 1 | 20200827 |
| EPI_ISL_820817 | Spike | hCoV-19/England/MILK-EB437D/2021 | H | 66 | N | 2 (geo) | 20210102 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | H | 66 | S | 1 | 20200428 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | H | 66 | T | 1 | 20201023 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | H | 66 | F | 2 (geo) | 20200324 |
| EPI_ISL_710522 | Spike | hCoV-19/England/205041750/2020 | A | 67 | V | 354 (geo) | 20200000 |
| EPI_ISL_450420 | Spike | hCoV-19/Anhui/HN020/2020 | A | 67 | S | 227 (geo) | 20200206 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | A | 67 | D | 3 (geo) | 20200327 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | A | 67 | I | 4 (geo) | 20200416 |
| EPI_ISL_763351 | Spike | hCoV-19/Ireland/LK-UHL3/2020 | A | 67 | M | 13 (geo) | 20200401 |
| EPI_ISL_473486 | Spike | hCoV-19/England/CAMB-1B492D/2020 | A | 67 | T | 14 (geo) | 20200605 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | A | 67 | L | 6 (geo) | 20200324 |
| EPI_ISL_833183 | Spike | hCoV-19/Spain/GA-CHUVI-19120216/2020 | A | 67 | C | 1 | 20201228 |
| EPI_ISL_584071 | Spike | hCoV-19/Italy/CAM-IZSM-45947/2020 | A | 67 | G | 3 (geo) | 20201001 |
| EPI_ISL_584071 | Spike | hCoV-19/Italy/CAM-IZSM-45947/2020 | - | 67 | S | 3 (geo) | 20201001 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | A | 67 | F | 1 | 20200428 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | A | 67 | H | 1 | 20201222 |
| EPI_ISL_776226 | Spike | hCoV-19/Germany/HH-hpi-p1882/2020 | I | 68 | T | 37 (geo) | 20200324 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | I | 68 | S | 4 (geo) | 20200416 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | I | 68 | Y | 4 (geo) | 20200324 |
| EPI_ISL_552306 | Spike | hCoV-19/England/MILK-993B35/2020 | I | 68 | L | 6 (geo) | 20200827 |
| EPI_ISL_523989 | Spike | hCoV-19/Brazil/SP-208/2020 | I | 68 | M | 7 (geo) | 20200420 |
| EPI_ISL_551001 | Spike | hCoV-19/England/MILK-9A9DFA/2020 | I | 68 | V | 5 (geo) | 20200901 |
| EPI_ISL_528637 | Spike | hCoV-19/Brazil/RJ-MD63-1a/2020 | I | 68 | K | 1 | 20200316 |
| EPI_ISL_493139 | Spike | hCoV-19/Thailand/MUMT-4/2020 | I | 68 | R | 1 | 20200303 |
| EPI_ISL_452072 | Spike | hCoV-19/Denmark/ALAB-HH-221/2020 | I | 68 | P | 1 | 20200428 |
| EPI_ISL_451360 | Spike | hCoV-19/Sichuan/SC-PHCC2-040/2020 | H | 69 | Y | 178 (geo) | 20200124 |
| EPI_ISL_510839 | Spike | hCoV-19/Sweden/20-51736/2020 | H | 69 | D | 5 (geo) | 20200519 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | H | 69 | N | 6 (geo) | 20200416 |
| EPI_ISL_596523 | Spike | hCoV-19/Palestine/40/2020 | H | 69 | Q | 18 (geo) | 20200815 |
| EPI_ISL_672553 | Spike | hCoV-19/USA/UT-UPHL-201203314/2020 | H | 69 | R | 5 (geo) | 20200401 |
| EPI_ISL_666740 | Spike | hCoV-19/England/204490097/2020 | H | 69 | F | 25 (geo) | 20201029 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | H | 69 | M | 4 (geo) | 20200324 |
| EPI_ISL_466203 | Spike | hCoV-19/England/20149049104/2020 | H | 69 | L | 3 (geo) | 20200403 |
| EPI_ISL_551001 | Spike | hCoV-19/England/MILK-9A9DFA/2020 | H | 69 | P | 5 (geo) | 20200901 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | H | 69 | K | 1 | 20201023 |
| EPI_ISL_833184 | Spike | hCoV-19/Spain/GA-CHUVI-281190/2020 | H | 69 | V | 1 | 20201222 |
| EPI_ISL_802535 | Spike | hCoV-19/Netherlands/ZH-EMC-1289/2020 | V | 70 | I | 1332 (geo) | 20200000 |
| EPI_ISL_649900 | Spike | hCoV-19/England/204742185/2020 | V | 70 | F | 134 (geo) | 20200000 |
| EPI_ISL_825687 | Spike | hCoV-19/Canada/Qc-JUS-V924188799/2020 | V | 70 | A | 36 (geo) | 20200724 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | V | 70 | L | 9 (geo) | 20200416 |
| EPI_ISL_737015 | Spike | hCoV-19/Czech Republic/NRL_10750/2020 | V | 70 | T | 1 | 20201102 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | V | 70 | S | 3 (geo) | 20200324 |
| EPI_ISL_551001 | Spike | hCoV-19/England/MILK-9A9DFA/2020 | V | 70 | C | 2 (geo) | 20200901 |
| EPI_ISL_854074 | Spike | hCoV-19/Austria/CeMM1646/2020 | S | 71 | F | 59 (geo) | 20200000 |
| EPI_ISL_802077 | Spike | hCoV-19/USA/NY-MSHSPSP-PV12382/2020 | S | 71 | P | 106 (geo) | 20200504 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | S | 71 | L | 8 (geo) | 20200324 |
| EPI_ISL_465270 | Spike | hCoV-19/England/20170003404/2020 | S | 71 | Y | 1 | 20200419 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | G | 72 | R | 136 (geo) | 20200416 |
| EPI_ISL_584663 | Spike | hCoV-19/England/LOND-124E168/2020 | G | 72 | E | 77 (geo) | 20200000 |
| EPI_ISL_660274 | Spike | hCoV-19/Spain/CT-IBV-99009877/2020 | G | 72 | A | 2 (geo) | 20200801 |
| EPI_ISL_542280 | Spike | hCoV-19/Italy/LOM-UniMI-L335/2020 | G | 72 | V | 20 (geo) | 20200303 |
| EPI_ISL_547514 | Spike | hCoV-19/Netherlands/UT-RIVM-10046/2020 | G | 72 | W | 7 (geo) | 20200309 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | G | 72 | D | 1 | 20201023 |
| EPI_ISL_474304 | Spike | hCoV-19/Wales/PHWC-2C2DB/2020 | T | 73 | I | 93 (geo) | 20200403 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | T | 73 | E | 3 (geo) | 20200416 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | T | 73 | P | 5 (geo) | 20200324 |
| EPI_ISL_606914 | Spike | hCoV-19/England/MILK-A79B16/2020 | T | 73 | A | 2 (geo) | 20201015 |
| EPI_ISL_452732 | Spike | hCoV-19/Spain/PV-IBV-000759/2020 | T | 73 | N | 4 (geo) | 20200306 |
| EPI_ISL_581943 | Spike | hCoV-19/Switzerland/AG-42387010/2020 | N | 74 | Y | 6 (geo) | 20200809 |
| EPI_ISL_527871 | Spike | hCoV-19/Yunnan/KMS1/2020 | N | 74 | K | 5 (geo) | 20200120 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | N | 74 | I | 3 (geo) | 20200416 |
| EPI_ISL_522529 | Spike | hCoV-19/South Korea/KCDC2750/2020 | N | 74 | D | 6 (geo) | 20200719 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | N | 74 | M | 1 | 20200712 |
| EPI_ISL_835521 | Spike | hCoV-19/England/ALDP-E85788/2021 | N | 74 | T | 1 | 20210102 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | N | 74 | Q | 1 | 20201023 |
| EPI_ISL_582016 | Spike | hCoV-19/Iran/SA-Isf-70/2020 | N | 74 | H | 1 | 20200804 |
| EPI_ISL_425731 | Spike | hCoV-19/Scotland/CVR200/2020 | G | 75 | V | 285 (geo) | 20200317 |
| EPI_ISL_452172 | Spike | hCoV-19/USA/UT-01986/2020 | G | 75 | R | 360 (geo) | 20200416 |
| EPI_ISL_452465 | Spike | hCoV-19/Spain/AN-IBV-001881/2020 | G | 75 | D | 28 (geo) | 20200311 |
| EPI_ISL_776144 | Spike | hCoV-19/Germany/HH-hpi-p1770/2020 | G | 75 | S | 34 (geo) | 20200319 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | G | 75 | F | 4 (geo) | 20200416 |
| EPI_ISL_508360 | Spike | hCoV-19/India/WB-IK30/2020 | G | 75 | A | 7 (geo) | 20200428 |
| EPI_ISL_480724 | Spike | hCoV-19/Australia/VIC2120/2020 | G | 75 | C | 4 (geo) | 20200617 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | Y | 3 (geo) | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | I | 1 | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | Q | 1 | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | L | 5 (geo) | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | R | 1 | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | T | 1 | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | C | 1 | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | S | 3 (geo) | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | F | 1 | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | P | 1 | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | M | 2 (geo) | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 75 | G | 1 | 20201023 |
| EPI_ISL_417270 | Spike | hCoV-19/England/20109051806/2020 | T | 76 | I | 296 (geo) | 20200306 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | T | 76 | Q | 3 (geo) | 20200416 |
| EPI_ISL_734764 | Spike | hCoV-19/Belgium/rega-0616915/2020 | T | 76 | A | 5 (geo) | 20200616 |
| EPI_ISL_848663 | Spike | hCoV-19/USA/FL-BPHL-2717/2020 | T | 76 | S | 1 | 20201203 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | T | 76 | L | 1 | 20200712 |
| EPI_ISL_684364 | Spike | hCoV-19/Japan/PG-0754/2020 | T | 76 | N | 3 (geo) | 20200400 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | T | 76 | M | 1 | 20201023 |
| EPI_ISL_447136 | Spike | hCoV-19/Belgium/ULG-7921/2020 | K | 77 | N | 44 (geo) | 20200317 |
| EPI_ISL_648084 | Spike | hCoV-19/Singapore/1158/2020 | K | 77 | M | 34 (geo) | 20200327 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | K | 77 | L | 3 (geo) | 20200416 |
| EPI_ISL_651241 | Spike | hCoV-19/England/MILK-B38F34/2020 | K | 77 | Q | 2 (geo) | 20201102 |
| EPI_ISL_427244 | Spike | hCoV-19/USA/WA-UW-4130/2020 | K | 77 | R | 6 (geo) | 20200331 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | K | 77 | S | 1 | 20201023 |
| EPI_ISL_632007 | Spike | hCoV-19/USA/NY-NYCPHL-000547/2020 | R | 78 | M | 61 (geo) | 20200323 |
| EPI_ISL_695981 | Spike | hCoV-19/USA/AZ-TG654332/2020 | R | 78 | S | 37 (geo) | 20200413 |
| EPI_ISL_465593 | Spike | hCoV-19/England/20190142001/2020 | R | 78 | G | 20 (geo) | 20200504 |
| EPI_ISL_671690 | Spike | hCoV-19/USA/NY-NYCPHL-001107/2020 | R | 78 | T | 1 | 20201019 |
| EPI_ISL_419738 | Spike | hCoV-19/Australia/VIC19/2020 | R | 78 | K | 19 (geo) | 20200308 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | R | 78 | L | 1 | 20201023 |
| EPI_ISL_454825 | Spike | hCoV-19/USA/NC_200252/2020 | F | 79 | L | 19 (geo) | 20200300 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | F | 79 | S | 3 (geo) | 20200416 |
| EPI_ISL_436105 | Spike | hCoV-19/Taiwan/TSGH-20/2020 | F | 79 | I | 1 | 20200327 |
| EPI_ISL_570611 | Spike | hCoV-19/USA/WA-UW-24891/2020 | F | 79 | V | 1 | 20200810 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | F | 79 | G | 1 | 20201023 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | F | 79 | P | 1 | 20200418 |
| EPI_ISL_853768 | Spike | hCoV-19/Austria/CeMM1952/2020 | D | 80 | A | 709 (geo) | 20200000 |
| EPI_ISL_679344 | Spike | hCoV-19/England/EXET-139DE8/2020 | D | 80 | Y | 2338 (geo) | 20200000 |
| EPI_ISL_450080 | Spike | hCoV-19/USA/NY-PV09399/2020 | D | 80 | N | 30 (geo) | 20200319 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | D | 80 | I | 4 (geo) | 20200416 |
| EPI_ISL_497865 | Spike | hCoV-19/Hong Kong/HKU-200723-098/2020 | D | 80 | G | 18 (geo) | 20200414 |
| EPI_ISL_737273 | Spike | hCoV-19/USA/MI-MDHHS-SC22659/2020 | D | 80 | H | 5 (geo) | 20201106 |
| EPI_ISL_427244 | Spike | hCoV-19/USA/WA-UW-4130/2020 | D | 80 | S | 2 (geo) | 20200331 |
| EPI_ISL_602724 | Spike | hCoV-19/South Africa/KRISP-K003331/2020 | D | 80 | V | 1 | 20200905 |
| EPI_ISL_445021 | Spike | hCoV-19/USA/FL-BPHL-0078/2020 | D | 80 | E | 1 | 20200429 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | D | 80 | P | 1 | 20201023 |
| EPI_ISL_857146 | Spike | hCoV-19/USA/NY-NYCPHL-002317/2021 | D | 80 | F | 1 | 20210108 |
| EPI_ISL_617941 | Spike | hCoV-19/Denmark/DCGC-1346/2020 | D | 80 | Q | 1 | 20200504 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | N | 81 | R | 3 (geo) | 20200416 |
| EPI_ISL_622202 | Spike | hCoV-19/Denmark/DCGC-1735/2020 | N | 81 | F | 2 (geo) | 20200323 |
| EPI_ISL_423392 | Spike | hCoV-19/England/20140063904/2020 | N | 81 | D | 1 | 20200329 |
| EPI_ISL_515824 | Spike | hCoV-19/South Africa/KRISP-K001339/2020 | N | 81 | Y | 3 (geo) | 20200710 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | N | 81 | T | 1 | 20200712 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | N | 81 | M | 1 | 20201023 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | N | 81 | P | 1 | 20200418 |
| EPI_ISL_454524 | Spike | hCoV-19/India/MH-NIV-12058/2020 | P | 82 | L | 19 (geo) | 20200420 |
| EPI_ISL_539019 | Spike | hCoV-19/England/LEED-2A8AFB/2020 | P | 82 | H | 14 (geo) | 20200329 |
| EPI_ISL_617941 | Spike | hCoV-19/Denmark/DCGC-1346/2020 | P | 82 | S | 3 (geo) | 20200504 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | P | 82 | V | 1 | 20201023 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | P | 82 | Y | 1 | 20200418 |
| EPI_ISL_664097 | Spike | hCoV-19/England/C200046015/2020 | V | 83 | I | 73 (geo) | 20200000 |
| EPI_ISL_421730 | Spike | hCoV-19/USA/NY-NYUMC118/2020 | V | 83 | F | 25 (geo) | 20200318 |
| EPI_ISL_805001 | Spike | hCoV-19/Canada/AB-91395/2020 | V | 83 | A | 2 (geo) | 20200507 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | V | 83 | L | 6 (geo) | 20200418 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | V | 83 | S | 1 | 20200712 |
| EPI_ISL_448202 | Spike | hCoV-19/Scotland/CVR2880/2020 | L | 84 | I | 18 (geo) | 20200421 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | L | 84 | A | 2 (geo) | 20200416 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | L | 84 | Y | 1 | 20200712 |
| EPI_ISL_617941 | Spike | hCoV-19/Denmark/DCGC-1346/2020 | L | 84 | T | 2 (geo) | 20200504 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | L | 84 | R | 1 | 20201023 |
| EPI_ISL_470633 | Spike | hCoV-19/Brazil/RJ-0267/2020 | L | 84 | Q | 1 | 20200415 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | P | 85 | H | 4 (geo) | 20200416 |
| EPI_ISL_859703 | Spike | hCoV-19/United Arab Emirates/3230/2020 | P | 85 | S | 10 (geo) | 20200929 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | P | 85 | L | 3 (geo) | 20200418 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | P | 85 | G | 1 | 20201023 |
| EPI_ISL_479662 | Spike | hCoV-19/South Korea/CNUHV03/2020 | F | 86 | S | 2 (geo) | 20200311 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | F | 86 | L | 5 (geo) | 20200416 |
| EPI_ISL_479573 | Spike | hCoV-19/India/MH-NIV-SARI-4487/2020 | F | 86 | P | 1 | 20200412 |
| EPI_ISL_436105 | Spike | hCoV-19/Taiwan/TSGH-20/2020 | F | 86 | Y | 2 (geo) | 20200327 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | F | 86 | I | 1 | 20200418 |
| EPI_ISL_602856 | Spike | hCoV-19/South Africa/KRISP-K003539/2020 | N | 87 | I | 2 (geo) | 20200926 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | N | 87 | V | 3 (geo) | 20200416 |
| EPI_ISL_495757 | Spike | hCoV-19/USA/WA-S1307/2020 | N | 87 | Y | 3 (geo) | 20200513 |
| EPI_ISL_636750 | Spike | hCoV-19/India/UT-67177-CSIR-IGIB/2020 | N | 87 | K | 9 (geo) | 20200809 |
| EPI_ISL_479573 | Spike | hCoV-19/India/MH-NIV-SARI-4487/2020 | N | 87 | G | 1 | 20200412 |
| EPI_ISL_570049 | Spike | hCoV-19/USA/WA-UW-4434/2020 | N | 87 | S | 3 (geo) | 20200502 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | N | 87 | M | 1 | 20200712 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | N | 87 | T | 1 | 20200418 |
| EPI_ISL_671565 | Spike | hCoV-19/Canada/ON-PHL-20-02302/2020 | N | 87 | D | 1 | 20200900 |
| EPI_ISL_486409 | Spike | hCoV-19/India/KA-nimh-15896/2020 | D | 88 | H | 27 (geo) | 20200510 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | D | 88 | M | 4 (geo) | 20200416 |
| EPI_ISL_542353 | Spike | hCoV-19/Italy/LOM-UniMI-L434/2020 | D | 88 | N | 15 (geo) | 20200320 |
| EPI_ISL_497276 | Spike | hCoV-19/USA/WA-S2644/2020 | D | 88 | E | 7 (geo) | 20200620 |
| EPI_ISL_460165 | Spike | hCoV-19/USA/MA-MGH-00666/2020 | D | 88 | Y | 11 (geo) | 20200404 |
| EPI_ISL_431017 | Spike | hCoV-19/USA/AK-PHL040/2020 | D | 88 | A | 1 | 20200324 |
| EPI_ISL_537306 | Spike | hCoV-19/Spain/CL-IBV-97006159/2020 | D | 88 | G | 1 | 20200405 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | D | 88 | T | 1 | 20201023 |
| EPI_ISL_592412 | Spike | hCoV-19/Australia/VIC14244/2020 | D | 88 | V | 1 | 20200803 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | D | 88 | L | 1 | 20200418 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | G | 89 | V | 4 (geo) | 20200416 |
| EPI_ISL_833532 | Spike | hCoV-19/Italy/CAM-TIGEM-933/2020 | G | 89 | W | 1 | 20200507 |
| EPI_ISL_454256 | Spike | hCoV-19/Portugal/PT0532/2020 | G | 89 | D | 1 | 20200407 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | G | 89 | L | 2 (geo) | 20200418 |
| EPI_ISL_417217 | Spike | hCoV-19/England/20102098802/2020 | V | 90 | F | 233 (geo) | 20200301 |
| EPI_ISL_671990 | Spike | hCoV-19/Ecuador/UEES-7435/2020 | V | 90 | I | 9 (geo) | 20200000 |
| EPI_ISL_476823 | Spike | hCoV-19/Benin/260/2020 | V | 90 | L | 24 (geo) | 20200317 |
| EPI_ISL_833532 | Spike | hCoV-19/Italy/CAM-TIGEM-933/2020 | V | 90 | C | 1 | 20200507 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | V | 90 | S | 1 | 20201023 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | V | 90 | M | 1 | 20200418 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | Y | 91 | K | 4 (geo) | 20200416 |
| EPI_ISL_545488 | Spike | hCoV-19/USA/TX-HMH-2702/2020 | Y | 91 | F | 1 | 20200604 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | Y | 91 | L | 3 (geo) | 20200418 |
| EPI_ISL_452159 | Spike | hCoV-19/USA/UT-01526/2020 | Y | 91 | S | 1 | 20200410 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | Y | 91 | I | 1 | 20200712 |
| EPI_ISL_451352 | Spike | hCoV-19/Sichuan/SC-PHCC1-031/2020 | F | 92 | L | 2 (geo) | 20200208 |
| EPI_ISL_473763 | Spike | hCoV-19/Scotland/CVR3707/2020 | F | 92 | V | 3 (geo) | 20200525 |
| EPI_ISL_855077 | Spike | hCoV-19/USA/CA-QDX-3260/2021 | F | 92 | S | 1 | 20210108 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | F | 92 | H | 1 | 20201023 |
| EPI_ISL_457148 | Spike | hCoV-19/England/EXET-135C2B/2020 | A | 93 | S | 21 (geo) | 20200000 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | A | 93 | L | 3 (geo) | 20200418 |
| EPI_ISL_480693 | Spike | hCoV-19/Australia/NT45/2020 | A | 93 | V | 3 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | A | 93 | N | 1 | 20200416 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | A | 93 | Y | 1 | 20201023 |
| EPI_ISL_418402 | Spike | hCoV-19/Finland/14M13/2020 | S | 94 | F | 28 (geo) | 20200314 |
| EPI_ISL_473763 | Spike | hCoV-19/Scotland/CVR3707/2020 | S | 94 | I | 2 (geo) | 20200525 |
| EPI_ISL_784058 | Spike | hCoV-19/USA/TX-HMH-MCoV-19706/2020 | S | 94 | A | 4 (geo) | 20201121 |
| EPI_ISL_641273 | Spike | hCoV-19/Australia/VIC15868/2020 | S | 94 | P | 2 (geo) | 20201005 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | S | 94 | C | 1 | 20200416 |
| EPI_ISL_676657 | Spike | hCoV-19/USA/NY-Wadsworth-181115-01/2020 | S | 94 | Y | 1 | 20200724 |
| EPI_ISL_712712 | Spike | hCoV-19/Denmark/DCGC-13292/2020 | S | 94 | T | 1 | 20201130 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | S | 94 | K | 1 | 20200418 |
| EPI_ISL_461529 | Spike | hCoV-19/England/BIRM-5FE53/2020 | T | 95 | I | 861 (geo) | 20200000 |
| EPI_ISL_528409 | Spike | hCoV-19/England/20186102804/2020 | T | 95 | N | 27 (geo) | 20200429 |
| EPI_ISL_473763 | Spike | hCoV-19/Scotland/CVR3707/2020 | T | 95 | V | 2 (geo) | 20200525 |
| EPI_ISL_591316 | Spike | hCoV-19/Iran/K1r-63/2020 | T | 95 | P | 1 | 20200400 |
| EPI_ISL_491000 | Spike | hCoV-19/USA/MN-UW-MAYO71/2020 | T | 95 | A | 8 (geo) | 20200316 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | T | 95 | Y | 1 | 20200416 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | T | 95 | S | 3 (geo) | 20200418 |
| EPI_ISL_778870 | Spike | hCoV-19/Morocco/FMP-64/2020 | E | 96 | D | 250 (geo) | 20200000 |
| EPI_ISL_479662 | Spike | hCoV-19/South Korea/CNUHV03/2020 | E | 96 | G | 48 (geo) | 20200311 |
| EPI_ISL_446849 | Spike | hCoV-19/Wales/PHWC-33F9E/2020 | E | 96 | A | 6 (geo) | 20200418 |
| EPI_ISL_515607 | Spike | hCoV-19/South Africa/KRISP-K002210/2020 | E | 96 | Q | 17 (geo) | 20200724 |
| EPI_ISL_521337 | Spike | hCoV-19/Australia/VIC6571/2020 | E | 96 | T | 1 | 20200717 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | E | 96 | V | 1 | 20200418 |
| EPI_ISL_676795 | Spike | hCoV-19/USA/NY-Wadsworth-34750-01/2020 | K | 97 | N | 21 (geo) | 20200331 |
| EPI_ISL_484964 | Spike | hCoV-19/USA/WI-UW-589/2020 | K | 97 | T | 10 (geo) | 20200619 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | K | 97 | F | 3 (geo) | 20200416 |
| EPI_ISL_693247 | Spike | hCoV-19/Brazil/SP-705/2020 | K | 97 | M | 2 (geo) | 20200630 |
| EPI_ISL_452080 | Spike | hCoV-19/Denmark/ALAB-HH-240/2020 | K | 97 | E | 9 (geo) | 20200416 |
| EPI_ISL_507247 | Spike | hCoV-19/Russia/StPetersburg-RII11251S/2020 | K | 97 | Q | 6 (geo) | 20200430 |
| EPI_ISL_453720 | Spike | hCoV-19/England/SHEF-C6640/2020 | K | 97 | R | 4 (geo) | 20200422 |
| EPI_ISL_831455 | Spike | hCoV-19/Germany/BE-RKI-I-0054/2020 | S | 98 | F | 5283 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | S | 98 | P | 24 (geo) | 20200416 |
| EPI_ISL_864648 | Spike | hCoV-19/Switzerland/GE-32920002/2021 | S | 98 | C | 1 | 20210109 |
| EPI_ISL_559536 | Spike | hCoV-19/England/ALDP-4A5607/2020 | N | 99 | K | 2 (geo) | 20200612 |
| EPI_ISL_559536 | Spike | hCoV-19/England/ALDP-4A5607/2020 | - | 99 | A | 1 | 20200612 |
| EPI_ISL_559536 | Spike | hCoV-19/England/ALDP-4A5607/2020 | - | 99 | E | 1 | 20200612 |
| EPI_ISL_559536 | Spike | hCoV-19/England/ALDP-4A5607/2020 | - | 99 | N | 1 | 20200612 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | N | 99 | L | 3 (geo) | 20200416 |
| EPI_ISL_714083 | Spike | hCoV-19/Denmark/DCGC-15885/2020 | N | 99 | D | 27 (geo) | 20201123 |
| EPI_ISL_417327 | Spike | hCoV-19/USA/CA-CDPH-UC23/2020 | N | 99 | S | 6 (geo) | 20200309 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | - | 99 | F | 2 (geo) | 20200418 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | - | 99 | V | 1 | 20200418 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | - | 99 | M | 1 | 20200418 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | - | 99 | I | 1 | 20200418 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | - | 99 | H | 1 | 20200418 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | - | 99 | W | 1 | 20200418 |
| EPI_ISL_694762 | Spike | hCoV-19/USA/AZ-TG395922/2020 | I | 100 | V | 2 (geo) | 20200608 |
| EPI_ISL_474801 | Spike | hCoV-19/Spain/CM-IBV-003755/2020 | I | 100 | L | 13 (geo) | 20200402 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | I | 100 | Q | 3 (geo) | 20200416 |
| EPI_ISL_488988 | Spike | hCoV-19/Scotland/EDB2711/2020 | I | 100 | T | 17 (geo) | 20200327 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | I | 100 | M | 5 (geo) | 20200324 |
| EPI_ISL_722466 | Spike | hCoV-19/Netherlands/LI-EMC-121/2020 | I | 101 | T | 14 (geo) | 20200000 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | I | 101 | S | 3 (geo) | 20200416 |
| EPI_ISL_456190 | Spike | hCoV-19/New Zealand/20VR1109/2020 | I | 101 | V | 10 (geo) | 20200303 |
| EPI_ISL_718958 | Spike | hCoV-19/England/CAMC-C476E1/2020 | I | 101 | M | 5 (geo) | 20201210 |
| EPI_ISL_679980 | Spike | hCoV-19/England/PORT-2E9FE0/2020 | R | 102 | I | 206 (geo) | 20200000 |
| EPI_ISL_516834 | Spike | hCoV-19/England/LOND-12608F2/2020 | R | 102 | G | 16 (geo) | 20200404 |
| EPI_ISL_498531 | Spike | hCoV-19/Australia/ACT0071/2020 | R | 102 | S | 85 (geo) | 20200322 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | R | 102 | Y | 3 (geo) | 20200416 |
| EPI_ISL_582016 | Spike | hCoV-19/Iran/SA-Isf-70/2020 | R | 102 | T | 2 (geo) | 20200804 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | R | 102 | E | 1 | 20201113 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | R | 102 | H | 2 (geo) | 20200324 |
| EPI_ISL_478280 | Spike | hCoV-19/England/EXET-135F40/2020 | G | 103 | A | 2 (geo) | 20200000 |
| EPI_ISL_451200 | Spike | hCoV-19/Uganda/UG018/2020 | G | 103 | S | 1 | 20200501 |
| EPI_ISL_581028 | Spike | hCoV-19/England/MILK-9E1075/2020 | G | 103 | C | 1 | 20200920 |
| EPI_ISL_582016 | Spike | hCoV-19/Iran/SA-Isf-70/2020 | G | 103 | R | 2 (geo) | 20200804 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | G | 103 | F | 2 (geo) | 20200324 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | W | 104 | F | 25 (geo) | 20200416 |
| EPI_ISL_413747 | Spike | hCoV-19/China/WF0017/2020 | W | 104 | S | 3 (geo) | 20200200 |
| EPI_ISL_614315 | Spike | hCoV-19/Faroe Islands/HFS-91/2020 | W | 104 | R | 1 | 20200805 |
| EPI_ISL_435059 | Spike | hCoV-19/South Africa/R05475/2020 | W | 104 | G | 2 (geo) | 20200320 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | I | 105 | Q | 3 (geo) | 20200416 |
| EPI_ISL_448741 | Spike | hCoV-19/England/OXON-AE9AF/2020 | I | 105 | V | 27 (geo) | 20200000 |
| EPI_ISL_864311 | Spike | hCoV-19/England/MILK-FAFDFE/2021 | I | 105 | T | 1 | 20210105 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | I | 105 | F | 2 (geo) | 20201113 |
| EPI_ISL_459084 | Spike | hCoV-19/England/BRIS-126ABA/2020 | I | 105 | L | 9 (geo) | 20200409 |
| EPI_ISL_622202 | Spike | hCoV-19/Denmark/DCGC-1735/2020 | I | 105 | Y | 1 | 20200323 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | F | 106 | P | 3 (geo) | 20200416 |
| EPI_ISL_568482 | Spike | hCoV-19/Iran/K1r-1/2020 | F | 106 | L | 2 (geo) | 20200322 |
| EPI_ISL_613960 | Spike | hCoV-19/Gibraltar/204421236/2020 | G | 107 | W | 1 | 20201027 |
| EPI_ISL_775618 | Spike | hCoV-19/Germany/HH-hpi-p1640/2020 | G | 107 | C | 8 (geo) | 20200317 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | G | 107 | T | 3 (geo) | 20200416 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | G | 107 | I | 4 (geo) | 20200324 |
| EPI_ISL_466468 | Spike | hCoV-19/England/20164069804/2020 | G | 107 | R | 1 | 20200410 |
| EPI_ISL_737610 | Spike | hCoV-19/Switzerland/VS-ETHZ-410888/2020 | G | 107 | D | 1 | 20201216 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | G | 107 | V | 1 | 20201113 |
| EPI_ISL_672597 | Spike | hCoV-19/Iran/SA-Isf-45/2020 | G | 107 | A | 1 | 20200615 |
| EPI_ISL_481206 | Spike | hCoV-19/Norway/2477/2020 | T | 108 | I | 3 (geo) | 20200427 |
| EPI_ISL_613960 | Spike | hCoV-19/Gibraltar/204421236/2020 | T | 108 | Y | 1 | 20201027 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | T | 108 | N | 5 (geo) | 20200416 |
| EPI_ISL_589769 | Spike | hCoV-19/Wales/MILK-9EE9E6/2020 | T | 108 | S | 1 | 20200923 |
| EPI_ISL_608748 | Spike | hCoV-19/England/MILK-A6ACE8/2020 | T | 108 | C | 2 (geo) | 20201009 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | T | 108 | L | 1 | 20201113 |
| EPI_ISL_582519 | Spike | hCoV-19/Portugal/PT1179/2020 | T | 109 | Y | 2 (geo) | 20200324 |
| EPI_ISL_475939 | Spike | hCoV-19/Singapore/408/2020 | T | 109 | I | 2 (geo) | 20200421 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | T | 109 | G | 3 (geo) | 20200416 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | T | 109 | S | 5 (geo) | 20200100 |
| EPI_ISL_754113 | Spike | hCoV-19/USA/CA-LACPHL-AF00030/2020 | T | 109 | A | 1 | 20201220 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | T | 109 | L | 1 | 20201113 |
| EPI_ISL_531211 | Spike | hCoV-19/England/QEUH-964BB5/2020 | T | 109 | K | 1 | 20200810 |
| EPI_ISL_788350 | Spike | hCoV-19/USA/TX-HMH-MCoV-13199/2020 | L | 110 | S | 1 | 20200825 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | L | 110 | V | 2 (geo) | 20200416 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | L | 110 | K | 4 (geo) | 20200324 |
| EPI_ISL_630051 | Spike | hCoV-19/England/MILK-AC785E/2020 | L | 110 | F | 2 (geo) | 20201021 |
| EPI_ISL_584586 | Spike | hCoV-19/England/CWAR-24FE1F9/2020 | L | 110 | I | 3 (geo) | 20200409 |
| EPI_ISL_573135 | Spike | hCoV-19/England/CAMB-1B5E87/2020 | D | 111 | N | 167 (geo) | 20200000 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | D | 111 | I | 7 (geo) | 20200321 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | D | 111 | G | 2 (geo) | 20200416 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | D | 111 | Q | 3 (geo) | 20200100 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | D | 111 | T | 4 (geo) | 20200324 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | D | 111 | A | 1 | 20200228 |
| EPI_ISL_531211 | Spike | hCoV-19/England/QEUH-964BB5/2020 | D | 111 | R | 1 | 20200810 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | S | 112 | R | 8 (geo) | 20200321 |
| EPI_ISL_763093 | Spike | hCoV-19/Germany/TH-IIMK-CaSe-28/2020 | S | 112 | L | 31 (geo) | 20200403 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | S | 112 | Y | 2 (geo) | 20200416 |
| EPI_ISL_451265 | Spike | hCoV-19/USA/LA-EVTL104/2020 | S | 112 | P | 8 (geo) | 20200506 |
| EPI_ISL_754394 | Spike | hCoV-19/USA/NY-Wadsworth-285051-01/2020 | S | 112 | W | 1 | 20201207 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | S | 112 | G | 3 (geo) | 20200100 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | S | 112 | T | 5 (geo) | 20200324 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | S | 112 | I | 2 (geo) | 20200501 |
| EPI_ISL_578170 | Spike | hCoV-19/USA/MI-UM-10034110078/2020 | S | 112 | A | 1 | 20200505 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | K | 113 | R | 11 (geo) | 20200321 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | K | 113 | Q | 2 (geo) | 20200416 |
| EPI_ISL_429720 | Spike | hCoV-19/Luxembourg/LNS7863981/2020 | K | 113 | N | 5 (geo) | 20200326 |
| EPI_ISL_650083 | Spike | hCoV-19/USA/MI-UM-10036660976/2020 | K | 113 | T | 1 | 20201028 |
| EPI_ISL_531211 | Spike | hCoV-19/England/QEUH-964BB5/2020 | K | 113 | P | 1 | 20200810 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | T | 114 | P | 9 (geo) | 20200321 |
| EPI_ISL_654509 | Spike | hCoV-19/Spain/CT-IBV-97007952/2020 | T | 114 | I | 1 | 20201005 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | T | 114 | L | 3 (geo) | 20200100 |
| EPI_ISL_531211 | Spike | hCoV-19/England/QEUH-964BB5/2020 | T | 114 | S | 3 (geo) | 20200810 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | T | 114 | R | 2 (geo) | 20200501 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | T | 114 | V | 3 (geo) | 20200324 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | Q | 115 | S | 8 (geo) | 20200321 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | Q | 115 | Y | 2 (geo) | 20200416 |
| EPI_ISL_568491 | Spike | hCoV-19/Iran/K1r-108/2020 | Q | 115 | H | 10 (geo) | 20200320 |
| EPI_ISL_425228 | Spike | hCoV-19/Czech Republic/2556/2020 | Q | 115 | R | 2 (geo) | 20200322 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | Q | 115 | E | 3 (geo) | 20200100 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | Q | 115 | P | 3 (geo) | 20200501 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | Q | 115 | G | 1 | 20200324 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | S | 116 | P | 9 (geo) | 20200321 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | S | 116 | R | 5 (geo) | 20200100 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | S | 116 | E | 1 | 20201214 |
| EPI_ISL_437188 | Spike | hCoV-19/Indonesia/JI-ITD-3590NT/2020 | S | 116 | C | 1 | 20200414 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | S | 116 | A | 1 | 20200228 |
| EPI_ISL_518053 | Spike | hCoV-19/South Africa/KRISP-K002478/2020 | S | 116 | Y | 2 (geo) | 20200626 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | S | 116 | W | 1 | 20200324 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | L | 117 | Y | 7 (geo) | 20200321 |
| EPI_ISL_516986 | Spike | hCoV-19/India/UP-NBRI-N58-TEG811/2020 | L | 117 | I | 5 (geo) | 20200524 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | L | 117 | V | 2 (geo) | 20200416 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | L | 117 | F | 1 | 20201214 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | L | 117 | P | 2 (geo) | 20200501 |
| EPI_ISL_423339 | Spike | hCoV-19/England/20139002504/2020 | L | 118 | F | 34 (geo) | 20200327 |
| EPI_ISL_710484 | Spike | hCoV-19/Palestine/AAS16/2020 | L | 118 | I | 7 (geo) | 20201129 |
| EPI_ISL_456436 | Spike | hCoV-19/Australia/VIC1417/2020 | L | 118 | V | 2 (geo) | 20200416 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | L | 118 | Y | 2 (geo) | 20200501 |
| EPI_ISL_416579 | Spike | hCoV-19/Japan/DP0158/2020 | I | 119 | V | 68 (geo) | 20200215 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | I | 119 | L | 11 (geo) | 20200321 |
| EPI_ISL_493759 | Spike | hCoV-19/Scotland/CVR2051/2020 | I | 119 | M | 2 (geo) | 20200409 |
| EPI_ISL_542560 | Spike | hCoV-19/USA/TX-HMH-1161/2020 | I | 119 | T | 1 | 20200418 |
| EPI_ISL_439214 | Spike | hCoV-19/Scotland/EDB2462/2020 | V | 120 | F | 13 (geo) | 20200423 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | V | 120 | L | 9 (geo) | 20200321 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | V | 120 | I | 14 (geo) | 20200100 |
| EPI_ISL_761672 | Spike | hCoV-19/England/ALDP-CB502C/2020 | V | 120 | A | 1 | 20201216 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | N | 121 | I | 8 (geo) | 20200321 |
| EPI_ISL_427104 | Spike | hCoV-19/Australia/VIC844/2020 | N | 121 | S | 2 (geo) | 20200404 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | N | 121 | R | 1 | 20201214 |
| EPI_ISL_509290 | Spike | hCoV-19/South Africa/KRISP-K000641/2020 | N | 121 | T | 3 (geo) | 20200713 |
| EPI_ISL_537347 | Spike | hCoV-19/Spain/CL-IBV-97006201/2020 | N | 121 | K | 1 | 20200413 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | N | 121 | L | 2 (geo) | 20200501 |
| EPI_ISL_653403 | Spike | hCoV-19/USA/LA-EVTL711/2020 | N | 121 | D | 1 | 20200715 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | N | 122 | T | 8 (geo) | 20200321 |
| EPI_ISL_719889 | Spike | hCoV-19/England/QEUH-BA22C3/2020 | N | 122 | K | 1 | 20201118 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | N | 122 | I | 2 (geo) | 20200501 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | A | 123 | L | 8 (geo) | 20200321 |
| EPI_ISL_596382 | Spike | hCoV-19/Iran/K1r-114/2020 | A | 123 | T | 5 (geo) | 20200500 |
| EPI_ISL_507000 | Spike | hCoV-19/Malaysia/7924/2020 | A | 123 | V | 13 (geo) | 20200410 |
| EPI_ISL_721650 | Spike | hCoV-19/India/MH-NCCS-NR-11843/2020 | A | 123 | S | 2 (geo) | 20200715 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | T | 124 | L | 10 (geo) | 20200321 |
| EPI_ISL_542185 | Spike | hCoV-19/Italy/LOM-UniMI-L195/2020 | T | 124 | I | 13 (geo) | 20200321 |
| EPI_ISL_765210 | Spike | hCoV-19/Portugal/PT1652/2020 | T | 124 | S | 1 | 20201108 |
| EPI_ISL_677731 | Spike | hCoV-19/Hungary/US-30412w/2020 | T | 124 | A | 1 | 20200828 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | N | 125 | M | 8 (geo) | 20200321 |
| EPI_ISL_457152 | Spike | hCoV-19/England/EXET-135C94/2020 | N | 125 | S | 19 (geo) | 20200000 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | N | 125 | L | 2 (geo) | 20200501 |
| EPI_ISL_479660 | Spike | hCoV-19/India/MH-NIV-64880/2020 | N | 125 | D | 1 | 20200616 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | N | 125 | F | 1 | 20201124 |
| EPI_ISL_447527 | Spike | hCoV-19/Spain/VC-FISABIO-609/2020 | N | 125 | H | 1 | 20200401 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | V | 126 | L | 10 (geo) | 20200321 |
| EPI_ISL_569492 | Spike | hCoV-19/France/PAC-IHU-0407/2020 | V | 126 | F | 5 (geo) | 20200402 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | V | 126 | M | 2 (geo) | 20200501 |
| EPI_ISL_678016 | Spike | hCoV-19/Saudi Arabia/KAUST-MADINAH1374/2020 | V | 126 | I | 1 | 20200604 |
| EPI_ISL_444702 | Spike | hCoV-19/USA/NY-NYUMC585/2020 | V | 127 | F | 57 (geo) | 20200330 |
| EPI_ISL_469110 | Spike | hCoV-19/Singapore/355/2020 | V | 127 | A | 12 (geo) | 20200408 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | V | 127 | L | 12 (geo) | 20200321 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | V | 127 | I | 6 (geo) | 20200402 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | I | 128 | L | 12 (geo) | 20200321 |
| EPI_ISL_525607 | Spike | hCoV-19/USA/NY-Wadsworth-13977-01/2020 | I | 128 | V | 8 (geo) | 20200312 |
| EPI_ISL_427060 | Spike | hCoV-19/Australia/VIC785/2020 | I | 128 | F | 3 (geo) | 20200330 |
| EPI_ISL_511700 | Spike | hCoV-19/Portugal/PT1153/2020 | I | 128 | Y | 1 | 20200425 |
| EPI_ISL_475651 | Spike | hCoV-19/USA/CA-CSMC4/2020 | K | 129 | N | 2 (geo) | 20200327 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | K | 129 | I | 1 | 20200402 |
| EPI_ISL_511700 | Spike | hCoV-19/Portugal/PT1153/2020 | K | 129 | R | 3 (geo) | 20200425 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | K | 129 | A | 1 | 20201214 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | K | 129 | Q | 1 | 20201124 |
| EPI_ISL_478196 | Spike | hCoV-19/Scotland/EDB5274/2020 | K | 129 | C | 2 (geo) | 20200519 |
| EPI_ISL_464255 | Spike | hCoV-19/England/20100007204/2020 | V | 130 | S | 11 (geo) | 20200301 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | V | 130 | T | 1 | 20200402 |
| EPI_ISL_565890 | Spike | hCoV-19/USA/MI-MDHHS-SC21847/2020 | V | 130 | F | 3 (geo) | 20200424 |
| EPI_ISL_478076 | Spike | hCoV-19/Scotland/CVR3535/2020 | V | 130 | I | 3 (geo) | 20200514 |
| EPI_ISL_568482 | Spike | hCoV-19/Iran/K1r-1/2020 | V | 130 | G | 2 (geo) | 20200322 |
| EPI_ISL_419444 | Spike | hCoV-19/Wales/PHWC-246F5/2020 | V | 130 | L | 6 (geo) | 20200318 |
| EPI_ISL_857053 | Spike | hCoV-19/Belgium/UZA-UA-4959/2021 | V | 130 | D | 1 | 20210107 |
| EPI_ISL_568487 | Spike | hCoV-19/Iran/K1r-15/2020 | V | 130 | A | 2 (geo) | 20200320 |
| EPI_ISL_511700 | Spike | hCoV-19/Portugal/PT1153/2020 | V | 130 | C | 1 | 20200425 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | C | 131 | V | 10 (geo) | 20200321 |
| EPI_ISL_568482 | Spike | hCoV-19/Iran/K1r-1/2020 | C | 131 | R | 2 (geo) | 20200322 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | C | 131 | L | 1 | 20201214 |
| EPI_ISL_789797 | Spike | hCoV-19/USA/TX-HMH-MCoV-12679/2020 | C | 131 | Y | 1 | 20200831 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | C | 131 | N | 1 | 20201124 |
| EPI_ISL_458805 | Spike | hCoV-19/England/BRIS-12952F/2020 | C | 131 | F | 1 | 20200419 |
| EPI_ISL_457399 | Spike | hCoV-19/England/NORW-EAF87/2020 | C | 131 | W | 1 | 20200429 |
| EPI_ISL_594466 | Spike | hCoV-19/USA/FL-BPHL-1631/2020 | C | 131 | S | 1 | 20200601 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | E | 132 | N | 11 (geo) | 20200321 |
| EPI_ISL_413696 | Spike | hCoV-19/China/WF0009/2020 | E | 132 | Q | 78 (geo) | 20200100 |
| EPI_ISL_478076 | Spike | hCoV-19/Scotland/CVR3535/2020 | E | 132 | L | 1 | 20200514 |
| EPI_ISL_457812 | Spike | hCoV-19/USA/MD-HP00119/2020 | E | 132 | D | 2 (geo) | 20200318 |
| EPI_ISL_427244 | Spike | hCoV-19/USA/WA-UW-4130/2020 | E | 132 | P | 1 | 20200331 |
| EPI_ISL_496622 | Spike | hCoV-19/Panama/328981/2020 | E | 132 | K | 3 (geo) | 20200310 |
| EPI_ISL_438399 | Spike | hCoV-19/England/CAMB-75F54/2020 | E | 132 | A | 7 (geo) | 20200330 |
| EPI_ISL_511700 | Spike | hCoV-19/Portugal/PT1153/2020 | E | 132 | R | 1 | 20200425 |
| EPI_ISL_447304 | Spike | hCoV-19/Israel/701002407/2020 | F | 133 | S | 6 (geo) | 20200323 |
| EPI_ISL_828789 | Spike | hCoV-19/Iceland/5102/2020 | F | 133 | I | 1 | 20201203 |
| EPI_ISL_454136 | Spike | hCoV-19/Portugal/PT0412/2020 | F | 133 | C | 1 | 20200322 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | F | 133 | M | 1 | 20201214 |
| EPI_ISL_415623 | Spike | hCoV-19/USA/WA-UW58/2020 | F | 133 | Y | 1 | 20200309 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | F | 133 | A | 1 | 20201124 |
| EPI_ISL_796022 | Spike | hCoV-19/Hebei/IVDC-06-01/2021 | F | 133 | H | 1 | 20210103 |
| EPI_ISL_457399 | Spike | hCoV-19/England/NORW-EAF87/2020 | F | 133 | V | 1 | 20200429 |
| EPI_ISL_511700 | Spike | hCoV-19/Portugal/PT1153/2020 | F | 133 | L | 1 | 20200425 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | Q | 134 | N | 10 (geo) | 20200321 |
| EPI_ISL_528355 | Spike | hCoV-19/Switzerland/BS-UHB-42203425/2020 | Q | 134 | H | 4 (geo) | 20200323 |
| EPI_ISL_478076 | Spike | hCoV-19/Scotland/CVR3535/2020 | Q | 134 | A | 1 | 20200514 |
| EPI_ISL_568483 | Spike | hCoV-19/Iran/K1r-4/2020 | Q | 134 | S | 2 (geo) | 20200322 |
| EPI_ISL_427244 | Spike | hCoV-19/USA/WA-UW-4130/2020 | Q | 134 | K | 1 | 20200331 |
| EPI_ISL_525739 | Spike | hCoV-19/USA/WA-S2749/2020 | Q | 134 | R | 3 (geo) | 20200721 |
| EPI_ISL_767090 | Spike | hCoV-19/England/MILK-CB18CE/2020 | Q | 134 | E | 1 | 20201206 |
| EPI_ISL_568491 | Spike | hCoV-19/Iran/K1r-108/2020 | Q | 134 | T | 1 | 20200320 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | Q | 134 | I | 1 | 20201124 |
| EPI_ISL_583914 | Spike | hCoV-19/India/KA-nimh-11078/2020 | F | 135 | L | 5 (geo) | 20200504 |
| EPI_ISL_493569 | Spike | hCoV-19/England/NOTT-1129A5/2020 | F | 135 | V | 1 | 20200422 |
| EPI_ISL_666598 | Spike | hCoV-19/Norway/CS-18/2020 | F | 135 | I | 1 | 20200622 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | C | 136 | V | 8 (geo) | 20200321 |
| EPI_ISL_475701 | Spike | hCoV-19/USA/CA-CSMC85/2020 | C | 136 | G | 26 (geo) | 20200404 |
| EPI_ISL_478076 | Spike | hCoV-19/Scotland/CVR3535/2020 | C | 136 | S | 1 | 20200514 |
| EPI_ISL_527350 | Spike | hCoV-19/England/20179044004/2020 | C | 136 | F | 5 (geo) | 20200425 |
| EPI_ISL_445141 | Spike | hCoV-19/USA/LA-SR0286/2020 | C | 136 | R | 1 | 20200331 |
| EPI_ISL_568498 | Spike | hCoV-19/Iran/K1r-64/2020 | C | 136 | W | 2 (geo) | 20200325 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | N | 137 | M | 8 (geo) | 20200321 |
| EPI_ISL_557135 | Spike | hCoV-19/England/ALDP-8E2C53/2020 | N | 137 | S | 18 (geo) | 20200625 |
| EPI_ISL_591325 | Spike | hCoV-19/Iran/K1r-171/2020 | N | 137 | Y | 3 (geo) | 20200500 |
| EPI_ISL_568483 | Spike | hCoV-19/Iran/K1r-4/2020 | N | 137 | I | 1 | 20200322 |
| EPI_ISL_617941 | Spike | hCoV-19/Denmark/DCGC-1346/2020 | N | 137 | K | 2 (geo) | 20200504 |
| EPI_ISL_837994 | Spike | hCoV-19/England/CAMB-A9B826/2020 | D | 138 | H | 429 (geo) | 20200000 |
| EPI_ISL_548135 | Spike | hCoV-19/New Zealand/20VR3792/2020 | D | 138 | Y | 839 (geo) | 20200000 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | D | 138 | I | 8 (geo) | 20200321 |
| EPI_ISL_478076 | Spike | hCoV-19/Scotland/CVR3535/2020 | D | 138 | G | 5 (geo) | 20200514 |
| EPI_ISL_801909 | Spike | hCoV-19/USA/NY-MSHSPSP-PV18475/2020 | D | 138 | N | 13 (geo) | 20200923 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | D | 138 | S | 1 | 20201214 |
| EPI_ISL_582013 | Spike | hCoV-19/Iran/SA-Isf-64/2020 | D | 138 | V | 1 | 20200510 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | P | 139 | H | 8 (geo) | 20200321 |
| EPI_ISL_510955 | Spike | hCoV-19/Portugal/PT0696/2020 | P | 139 | S | 6 (geo) | 20200314 |
| EPI_ISL_560080 | Spike | hCoV-19/Wales/MILK-9A88FA/2020 | P | 139 | L | 4 (geo) | 20200901 |
| EPI_ISL_414935 | Spike | hCoV-19/Shandong/LY002-2/2020 | P | 139 | A | 1 | 20200121 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | F | 140 | L | 33 (geo) | 20200321 |
| EPI_ISL_510955 | Spike | hCoV-19/Portugal/PT0696/2020 | F | 140 | I | 3 (geo) | 20200314 |
| EPI_ISL_419818 | Spike | hCoV-19/Australia/VIC104/2020 | F | 140 | V | 1 | 20200317 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | F | 140 | G | 1 | 20200401 |
| EPI_ISL_686366 | Spike | hCoV-19/Japan/PG-8770/2020 | F | 140 | S | 1 | 20200900 |
| EPI_ISL_510955 | Spike | hCoV-19/Portugal/PT0696/2020 | L | 141 | F | 164 (geo) | 20200314 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | L | 141 | W | 9 (geo) | 20200321 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | L | 141 | V | 19 (geo) | 20200401 |
| EPI_ISL_454400 | Spike | hCoV-19/USA/PA-MGEL135/2020 | G | 142 | S | 105 (geo) | 20200000 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | G | 142 | N | 4 (geo) | 20200321 |
| EPI_ISL_548756 | Spike | hCoV-19/Canada/ON-PHL-20-00082/2020 | G | 142 | V | 75 (geo) | 20200000 |
| EPI_ISL_443788 | Spike | hCoV-19/England/BRIS-124CD4/2020 | G | 142 | D | 29 (geo) | 20200326 |
| EPI_ISL_438443 | Spike | hCoV-19/England/CAMB-768C1/2020 | G | 142 | C | 7 (geo) | 20200330 |
| EPI_ISL_478076 | Spike | hCoV-19/Scotland/CVR3535/2020 | G | 142 | K | 1 | 20200514 |
| EPI_ISL_425660 | Spike | hCoV-19/Scotland/CVR115/2020 | G | 142 | A | 13 (geo) | 20200313 |
| EPI_ISL_493759 | Spike | hCoV-19/Scotland/CVR2051/2020 | G | 142 | M | 2 (geo) | 20200409 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | G | 142 | Y | 1 | 20200401 |
| EPI_ISL_663615 | Spike | hCoV-19/Australia/VIC16873/2020 | V | 143 | F | 1048 (geo) | 20200000 |
| EPI_ISL_496777 | Spike | hCoV-19/Panama/334396/2020 | V | 143 | I | 7 (geo) | 20200330 |
| EPI_ISL_510955 | Spike | hCoV-19/Portugal/PT0696/2020 | V | 143 | C | 2 (geo) | 20200314 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | - | 143 | V | 2 (geo) | 20200418 |
| EPI_ISL_781062 | Spike | hCoV-19/USA/TX-HMH-MCoV-9328/2020 | V | 143 | D | 2 (geo) | 20200703 |
| EPI_ISL_446374 | Spike | hCoV-19/Wales/PHWC-30EB2/2020 | V | 143 | S | 3 (geo) | 20200409 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | V | 143 | Y | 1 | 20200401 |
| EPI_ISL_643957 | Spike | hCoV-19/England/CAMC-B0747B/2020 | V | 143 | E | 1 | 20201030 |
| EPI_ISL_841932 | Spike | hCoV-19/England/PORT-2E220C/2020 | Y | 144 | F | 169 (geo) | 20200000 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | Y | 144 | I | 9 (geo) | 20200315 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | Y | 144 | V | 20 (geo) | 20200621 |
| EPI_ISL_493759 | Spike | hCoV-19/Scotland/CVR2051/2020 | Y | 144 | H | 24 (geo) | 20200409 |
| EPI_ISL_648638 | Spike | hCoV-19/Singapore/1222/2020 | Y | 144 | S | 1 | 20200424 |
| EPI_ISL_568497 | Spike | hCoV-19/Iran/K1r-54/2020 | Y | 144 | D | 11 (geo) | 20200320 |
| EPI_ISL_510955 | Spike | hCoV-19/Portugal/PT0696/2020 | Y | 144 | L | 3 (geo) | 20200314 |
| EPI_ISL_542709 | Spike | hCoV-19/USA/TX-HMH-1415/2020 | Y | 144 | C | 1 | 20200416 |
| EPI_ISL_515272 | Spike | hCoV-19/USA/WA-UW-4569/2020 | Y | 145 | D | 60 (geo) | 20200331 |
| EPI_ISL_604242 | Spike | hCoV-19/USA/NY-QDX-1890/2020 | Y | 145 | H | 47 (geo) | 20200313 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | Y | 145 | M | 4 (geo) | 20200321 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | Y | 145 | T | 6 (geo) | 20200315 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | Y | 145 | L | 1 | 20200621 |
| EPI_ISL_698365 | Spike | hCoV-19/United Arab Emirates/0178/2020 | Y | 145 | N | 5 (geo) | 20200518 |
| EPI_ISL_500482 | Spike | hCoV-19/Brazil/PE-IAM48/2020 | Y | 145 | C | 1 | 20200408 |
| EPI_ISL_510955 | Spike | hCoV-19/Portugal/PT0696/2020 | Y | 145 | F | 1 | 20200314 |
| EPI_ISL_454553 | Spike | hCoV-19/India/MH-NIV-8187/2020 | Y | 145 | V | 1 | 20200402 |
| EPI_ISL_421011 | Spike | hCoV-19/Wales/PHWC-255F7/2020 | H | 146 | R | 18 (geo) | 20200324 |
| EPI_ISL_706875 | Spike | hCoV-19/England/PORT-2E9C43/2020 | H | 146 | Y | 578 (geo) | 20200000 |
| EPI_ISL_737996 | Spike | hCoV-19/Uganda/UG085/2020 | H | 146 | Q | 157 (geo) | 20200000 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | H | 146 | T | 6 (geo) | 20200315 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | H | 146 | P | 4 (geo) | 20200621 |
| EPI_ISL_447792 | Spike | hCoV-19/Colombia/VAC-GVI-97181/2020 | H | 146 | N | 3 (geo) | 20200403 |
| EPI_ISL_488019 | Spike | hCoV-19/England/NORT-2986BE/2020 | H | 146 | L | 1 | 20200422 |
| EPI_ISL_797231 | Spike | hCoV-19/England/MILK-DB0275/2020 | H | 146 | K | 1 | 20201229 |
| EPI_ISL_454553 | Spike | hCoV-19/India/MH-NIV-8187/2020 | H | 146 | G | 1 | 20200402 |
| EPI_ISL_426681 | Spike | hCoV-19/Australia/VIC374/2020 | K | 147 | Q | 2 (geo) | 20200322 |
| EPI_ISL_856989 | Spike | hCoV-19/USA/CA-CZB-9993/2020 | K | 147 | T | 2 (geo) | 20200630 |
| EPI_ISL_454553 | Spike | hCoV-19/India/MH-NIV-8187/2020 | K | 147 | E | 6 (geo) | 20200402 |
| EPI_ISL_782624 | Spike | hCoV-19/England/QEUH-C32A0B/2020 | K | 147 | I | 1 | 20201209 |
| EPI_ISL_789389 | Spike | hCoV-19/USA/TX-HMH-MCoV-10248/2020 | K | 147 | R | 2 (geo) | 20200707 |
| EPI_ISL_527856 | Spike | hCoV-19/Brazil/SP-292/2020 | K | 147 | N | 4 (geo) | 20200416 |
| EPI_ISL_723046 | Spike | hCoV-19/India/MH-ACTREC-169/2020 | K | 147 | H | 1 | 20200608 |
| EPI_ISL_426681 | Spike | hCoV-19/Australia/VIC374/2020 | N | 148 | Q | 1 | 20200322 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | N | 148 | T | 17 (geo) | 20200315 |
| EPI_ISL_417969 | Spike | hCoV-19/Spain/MD-HLP-LP10-12/2020 | N | 148 | K | 5 (geo) | 20200309 |
| EPI_ISL_468567 | Spike | hCoV-19/USA/CA-QDX-92/2020 | N | 148 | S | 15 (geo) | 20200313 |
| EPI_ISL_490642 | Spike | hCoV-19/England/SHEF-D177C/2020 | N | 148 | D | 8 (geo) | 20200426 |
| EPI_ISL_455018 | Spike | hCoV-19/India/GJ-GBRC121/2020 | N | 148 | Y | 2 (geo) | 20200502 |
| EPI_ISL_454553 | Spike | hCoV-19/India/MH-NIV-8187/2020 | N | 148 | G | 1 | 20200402 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | N | 149 | T | 8 (geo) | 20200315 |
| EPI_ISL_482779 | Spike | hCoV-19/Hong Kong/VM20019113/2020 | N | 149 | D | 4 (geo) | 20200530 |
| EPI_ISL_791519 | Spike | hCoV-19/USA/MA-MASPHL-00013/2020 | N | 149 | Y | 15 (geo) | 20200328 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | N | 149 | Q | 1 | 20200621 |
| EPI_ISL_417969 | Spike | hCoV-19/Spain/MD-HLP-LP10-12/2020 | N | 149 | H | 4 (geo) | 20200309 |
| EPI_ISL_572389 | Spike | hCoV-19/Brazil/PE-IAM1348/2020 | N | 149 | F | 1 | 20200511 |
| EPI_ISL_815360 | Spike | hCoV-19/Germany/BY-Cento-39772006/2020 | N | 149 | S | 2 (geo) | 20200919 |
| EPI_ISL_454553 | Spike | hCoV-19/India/MH-NIV-8187/2020 | N | 149 | G | 1 | 20200402 |
| EPI_ISL_558915 | Spike | hCoV-19/England/ALDP-519F02/2020 | K | 150 | R | 7 (geo) | 20200602 |
| EPI_ISL_438283 | Spike | hCoV-19/England/CAMB-760D8/2020 | K | 150 | N | 16 (geo) | 20200330 |
| EPI_ISL_570487 | Spike | hCoV-19/USA/OR-UW-12088/2020 | K | 150 | Q | 2 (geo) | 20200619 |
| EPI_ISL_572389 | Spike | hCoV-19/Brazil/PE-IAM1348/2020 | K | 150 | F | 2 (geo) | 20200511 |
| EPI_ISL_568503 | Spike | hCoV-19/Iran/K1r-116/2020 | K | 150 | I | 6 (geo) | 20200427 |
| EPI_ISL_496663 | Spike | hCoV-19/Panama/330413/2020 | K | 150 | E | 1 | 20200313 |
| EPI_ISL_465346 | Spike | hCoV-19/England/20172045604/2020 | K | 150 | T | 1 | 20200414 |
| EPI_ISL_454553 | Spike | hCoV-19/India/MH-NIV-8187/2020 | K | 150 | G | 1 | 20200402 |
| EPI_ISL_479662 | Spike | hCoV-19/South Korea/CNUHV03/2020 | S | 151 | G | 30 (geo) | 20200311 |
| EPI_ISL_572087 | Spike | hCoV-19/USA/CA-QDX-1435/2020 | S | 151 | I | 121 (geo) | 20200318 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | S | 151 | V | 5 (geo) | 20200402 |
| EPI_ISL_416344 | Spike | hCoV-19/Shanghai/SH0035/2020 | S | 151 | T | 6 (geo) | 20200130 |
| EPI_ISL_572389 | Spike | hCoV-19/Brazil/PE-IAM1348/2020 | S | 151 | C | 2 (geo) | 20200511 |
| EPI_ISL_454553 | Spike | hCoV-19/India/MH-NIV-8187/2020 | S | 151 | N | 7 (geo) | 20200402 |
| EPI_ISL_496649 | Spike | hCoV-19/Panama/329752/2020 | S | 151 | R | 3 (geo) | 20200314 |
| EPI_ISL_570810 | Spike | hCoV-19/USA/WA-UW-19395/2020 | S | 151 | K | 1 | 20200801 |
| EPI_ISL_480569 | Spike | hCoV-19/Australia/VIC702/2020 | S | 151 | H | 1 | 20200328 |
| EPI_ISL_453364 | Spike | hCoV-19/England/LIVE-9EADC/2020 | W | 152 | C | 820 (geo) | 20200405 |
| EPI_ISL_512803 | Spike | hCoV-19/USA/FL-USAFSAM-S035/2020 | W | 152 | L | 157 (geo) | 20200327 |
| EPI_ISL_450426 | Spike | hCoV-19/Anhui/MAS525/2020 | W | 152 | R | 154 (geo) | 20200215 |
| EPI_ISL_416356 | Spike | hCoV-19/Shanghai/SH0048/2020 | W | 152 | G | 7 (geo) | 20200201 |
| EPI_ISL_480569 | Spike | hCoV-19/Australia/VIC702/2020 | W | 152 | T | 1 | 20200328 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | W | 152 | F | 1 | 20200628 |
| EPI_ISL_708736 | Spike | hCoV-19/Thailand/Bangkok-025900/2020 | M | 153 | T | 1903 (geo) | 20200000 |
| EPI_ISL_706865 | Spike | hCoV-19/England/PORT-2D4CC3/2020 | M | 153 | I | 562 (geo) | 20200000 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | M | 153 | V | 46 (geo) | 20200315 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | M | 153 | W | 5 (geo) | 20200402 |
| EPI_ISL_541021 | Spike | hCoV-19/Spain/AR-IBV-98005745/2020 | M | 153 | L | 3 (geo) | 20200428 |
| EPI_ISL_454545 | Spike | hCoV-19/India/MH-NIV-6638/2020 | M | 153 | R | 1 | 20200402 |
| EPI_ISL_480569 | Spike | hCoV-19/Australia/VIC702/2020 | M | 153 | P | 1 | 20200328 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | M | 153 | K | 1 | 20200628 |
| EPI_ISL_478822 | Spike | hCoV-19/England/OXON-AFD0C/2020 | E | 154 | Q | 38 (geo) | 20200409 |
| EPI_ISL_536325 | Spike | hCoV-19/Canada/QC-LSPQ-L00242547/2020 | E | 154 | K | 15 (geo) | 20200329 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | E | 154 | L | 1 | 20201214 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | E | 154 | S | 2 (geo) | 20200315 |
| EPI_ISL_524435 | Spike | hCoV-19/USA/CA-SR-0840/2020 | E | 154 | V | 1 | 20200422 |
| EPI_ISL_482216 | Spike | hCoV-19/England/LOND-D68A1/2020 | E | 154 | G | 10 (geo) | 20200424 |
| EPI_ISL_590357 | Spike | hCoV-19/England/ALDP-9B5BC4/2020 | E | 154 | D | 3 (geo) | 20200828 |
| EPI_ISL_480569 | Spike | hCoV-19/Australia/VIC702/2020 | E | 154 | T | 1 | 20200328 |
| EPI_ISL_581305 | Spike | hCoV-19/England/MILK-9E2CE9/2020 | E | 154 | A | 1 | 20200921 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | E | 154 | N | 1 | 20200628 |
| EPI_ISL_476218 | Spike | hCoV-19/Brazil/CE-L12-CD224/2020 | S | 155 | I | 37 (geo) | 20200321 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | S | 155 | V | 5 (geo) | 20200402 |
| EPI_ISL_453949 | Spike | hCoV-19/Portugal/PT0235/2020 | S | 155 | N | 15 (geo) | 20200331 |
| EPI_ISL_754393 | Spike | hCoV-19/Chile/RM-191288/2020 | S | 155 | G | 19 (geo) | 20200926 |
| EPI_ISL_444039 | Spike | hCoV-19/Hong Kong/VM20010011/2020 | S | 155 | T | 9 (geo) | 20200408 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | S | 155 | K | 1 | 20201214 |
| EPI_ISL_480569 | Spike | hCoV-19/Australia/VIC702/2020 | S | 155 | E | 1 | 20200328 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | S | 155 | L | 1 | 20200628 |
| EPI_ISL_724846 | Spike | hCoV-19/England/NORT-1B63094/2020 | E | 156 | A | 57 (geo) | 20200000 |
| EPI_ISL_480569 | Spike | hCoV-19/Australia/VIC702/2020 | E | 156 | S | 5 (geo) | 20200328 |
| EPI_ISL_420073 | Spike | hCoV-19/Senegal/382/2020 | E | 156 | D | 43 (geo) | 20200319 |
| EPI_ISL_681736 | Spike | hCoV-19/Ireland/LK-UHL15/2020 | E | 156 | Q | 37 (geo) | 20200406 |
| EPI_ISL_496603 | Spike | hCoV-19/Panama/328688/2020 | E | 156 | G | 4 (geo) | 20200304 |
| EPI_ISL_525387 | Spike | hCoV-19/Ireland/KE-NVRL-71IRL96376/2020 | E | 156 | V | 1 | 20200801 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | - | 156 | H | 1 | 20200401 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | - | 156 | K | 2 (geo) | 20200401 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | - | 156 | N | 2 (geo) | 20200401 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | - | 156 | S | 1 | 20200401 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | - | 156 | W | 1 | 20200401 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | - | 156 | F | 3 (geo) | 20200628 |
| EPI_ISL_826886 | Spike | hCoV-19/Iceland/3193/2020 | E | 156 | K | 2 (geo) | 20200921 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | E | 156 | R | 1 | 20200628 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | - | 156 | E | 1 | 20200628 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | - | 156 | L | 1 | 20200628 |
| EPI_ISL_548135 | Spike | hCoV-19/New Zealand/20VR3792/2020 | F | 157 | L | 316 (geo) | 20200000 |
| EPI_ISL_418323 | Spike | hCoV-19/Canada/ON-PHL-3919/2020 | F | 157 | S | 31 (geo) | 20200300 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | F | 157 | N | 1 | 20201214 |
| EPI_ISL_859654 | Spike | hCoV-19/United Arab Emirates/2084/2020 | F | 157 | R | 2 (geo) | 20200706 |
| EPI_ISL_610155 | Spike | hCoV-19/Indonesia/JT-UGM-48408/2020 | F | 157 | C | 1 | 20200901 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | F | 157 | K | 1 | 20200324 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | R | 158 | E | 5 (geo) | 20200402 |
| EPI_ISL_480692 | Spike | hCoV-19/Australia/NT44/2020 | R | 158 | K | 15 (geo) | 20200000 |
| EPI_ISL_676887 | Spike | hCoV-19/USA/NY-Wadsworth-70464-01/2020 | R | 158 | G | 9 (geo) | 20200428 |
| EPI_ISL_582009 | Spike | hCoV-19/Iran/SA-Isf-68/2020 | R | 158 | L | 2 (geo) | 20200513 |
| EPI_ISL_461445 | Spike | hCoV-19/USA/WA-UW-5860/2020 | R | 158 | S | 6 (geo) | 20200331 |
| EPI_ISL_531948 | Spike | hCoV-19/England/QEUH-960A16/2020 | R | 158 | I | 3 (geo) | 20200803 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | R | 158 | V | 3 (geo) | 20200324 |
| EPI_ISL_582015 | Spike | hCoV-19/Iran/SA-Isf-67/2020 | R | 158 | P | 1 | 20200510 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | V | 159 | F | 12 (geo) | 20200402 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | V | 159 | I | 33 (geo) | 20200315 |
| EPI_ISL_496603 | Spike | hCoV-19/Panama/328688/2020 | V | 159 | L | 4 (geo) | 20200304 |
| EPI_ISL_653139 | Spike | hCoV-19/USA/FL-BPHL-1986/2020 | V | 159 | A | 2 (geo) | 20200418 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | V | 159 | Y | 1 | 20201014 |
| EPI_ISL_431924 | Spike | hCoV-19/Wales/PHWC-27EFA/2020 | V | 159 | E | 2 (geo) | 20200324 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | Y | 160 | I | 9 (geo) | 20200315 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | Y | 160 | S | 1 | 20201014 |
| EPI_ISL_859654 | Spike | hCoV-19/United Arab Emirates/2084/2020 | Y | 160 | D | 1 | 20200706 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | S | 161 | L | 5 (geo) | 20200402 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | S | 161 | A | 5 (geo) | 20200315 |
| EPI_ISL_480692 | Spike | hCoV-19/Australia/NT44/2020 | S | 161 | V | 5 (geo) | 20200000 |
| EPI_ISL_626816 | Spike | hCoV-19/England/NOTT-118DD0/2020 | S | 161 | Y | 2 (geo) | 20201029 |
| EPI_ISL_591317 | Spike | hCoV-19/Iran/K1r-85/2020 | S | 161 | F | 2 (geo) | 20200400 |
| EPI_ISL_492552 | Spike | hCoV-19/England/BRIS-12FD21/2020 | S | 161 | T | 2 (geo) | 20200409 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | S | 162 | V | 5 (geo) | 20200402 |
| EPI_ISL_447927 | Spike | hCoV-19/England/BIRM-5E9DB/2020 | S | 162 | I | 25 (geo) | 20200426 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | S | 162 | K | 1 | 20201214 |
| EPI_ISL_751223 | Spike | hCoV-19/Saudi Arabia/KAUST-MAKKAH1534/2020 | S | 162 | N | 3 (geo) | 20200413 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | S | 162 | L | 2 (geo) | 20200315 |
| EPI_ISL_480692 | Spike | hCoV-19/Australia/NT44/2020 | S | 162 | E | 5 (geo) | 20200000 |
| EPI_ISL_832029 | Spike | hCoV-19/USA/WY-WPHL-20044965/2020 | S | 162 | R | 1 | 20200716 |
| EPI_ISL_470110 | Spike | hCoV-19/England/CAMB-1AB83B/2020 | S | 162 | G | 2 (geo) | 20200420 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | S | 162 | A | 1 | 20201014 |
| EPI_ISL_474729 | Spike | hCoV-19/Wales/PHWC-368FA/2020 | A | 163 | S | 10 (geo) | 20200428 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | A | 163 | R | 5 (geo) | 20200402 |
| EPI_ISL_460694 | Spike | hCoV-19/Netherlands/NA_521/2020 | A | 163 | V | 25 (geo) | 20200329 |
| EPI_ISL_633735 | Spike | hCoV-19/England/QEUH-AD3190/2020 | A | 163 | T | 4 (geo) | 20201026 |
| EPI_ISL_647498 | Spike | hCoV-19/England/CAMC-B20861/2020 | A | 163 | E | 2 (geo) | 20201101 |
| EPI_ISL_735064 | Spike | hCoV-19/Belgium/rega-10061044/2020 | A | 163 | G | 2 (geo) | 20201006 |
| EPI_ISL_480692 | Spike | hCoV-19/Australia/NT44/2020 | A | 163 | I | 6 (geo) | 20200000 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | A | 163 | L | 2 (geo) | 20200315 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | A | 163 | N | 1 | 20201014 |
| EPI_ISL_679344 | Spike | hCoV-19/England/EXET-139DE8/2020 | N | 164 | T | 981 (geo) | 20200000 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | N | 164 | I | 7 (geo) | 20200402 |
| EPI_ISL_553248 | Spike | hCoV-19/England/MILK-970275/2020 | N | 164 | H | 1 | 20200817 |
| EPI_ISL_463963 | Spike | hCoV-19/Canada/QC_BA6/2020 | N | 164 | S | 8 (geo) | 20200413 |
| EPI_ISL_496781 | Spike | hCoV-19/Panama/334468/2020 | N | 164 | K | 2 (geo) | 20200330 |
| EPI_ISL_480692 | Spike | hCoV-19/Australia/NT44/2020 | N | 164 | L | 5 (geo) | 20200000 |
| EPI_ISL_573383 | Spike | hCoV-19/England/NORT-2A4831/2020 | N | 164 | D | 2 (geo) | 20200910 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | N | 165 | I | 5 (geo) | 20200402 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | N | 165 | D | 1 | 20200402 |
| EPI_ISL_480692 | Spike | hCoV-19/Australia/NT44/2020 | N | 165 | H | 13 (geo) | 20200000 |
| EPI_ISL_750374 | Spike | hCoV-19/Denmark/DCGC-17664/2020 | N | 165 | L | 1 | 20201214 |
| EPI_ISL_496781 | Spike | hCoV-19/Panama/334468/2020 | N | 165 | V | 1 | 20200330 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | N | 165 | M | 1 | 20200315 |
| EPI_ISL_479573 | Spike | hCoV-19/India/MH-NIV-SARI-4487/2020 | N | 165 | S | 2 (geo) | 20200412 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | N | 165 | C | 1 | 20201014 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | C | 166 | A | 5 (geo) | 20200402 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | C | 166 | S | 2 (geo) | 20200315 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | C | 166 | T | 1 | 20201014 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | T | 167 | L | 7 (geo) | 20200315 |
| EPI_ISL_496781 | Spike | hCoV-19/Panama/334468/2020 | T | 167 | S | 5 (geo) | 20200330 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | T | 167 | F | 1 | 20201014 |
| EPI_ISL_735579 | Spike | hCoV-19/England/MILK-C63A4D/2020 | T | 167 | I | 1 | 20201213 |
| EPI_ISL_684931 | Spike | hCoV-19/Japan/PG-1323/2020 | F | 168 | L | 7 (geo) | 20200400 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | F | 168 | G | 1 | 20200402 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | F | 168 | E | 1 | 20201014 |
| EPI_ISL_485877 | Spike | hCoV-19/USA/LA-GBCL-26492510/2020 | F | 168 | S | 1 | 20200424 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | E | 169 | N | 6 (geo) | 20200402 |
| EPI_ISL_754021 | Spike | hCoV-19/Germany/BE-ChVir-W2125-4401/2020 | E | 169 | K | 3 (geo) | 20200927 |
| EPI_ISL_582009 | Spike | hCoV-19/Iran/SA-Isf-68/2020 | E | 169 | Q | 2 (geo) | 20200513 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | E | 169 | S | 1 | 20200402 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | E | 169 | Y | 1 | 20201014 |
| EPI_ISL_500394 | Spike | hCoV-19/Spain/RI-IBV-005960/2020 | Y | 170 | H | 14 (geo) | 20200307 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | Y | 170 | M | 5 (geo) | 20200402 |
| EPI_ISL_640286 | Spike | hCoV-19/USA/UT-UPHL-201106746/2020 | Y | 170 | C | 1 | 20200621 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | Y | 170 | L | 1 | 20200402 |
| EPI_ISL_693223 | Spike | hCoV-19/Brazil/SP-643/2020 | Y | 170 | D | 1 | 20200702 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | Y | 170 | V | 1 | 20201014 |
| EPI_ISL_463086 | Spike | hCoV-19/India/OR-ILSCV23208/2020 | Y | 170 | N | 1 | 20200517 |
| EPI_ISL_780439 | Spike | hCoV-19/USA/TX-HMH-MCoV-8679/2020 | V | 171 | A | 9 (geo) | 20200702 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | V | 171 | S | 6 (geo) | 20200402 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | V | 171 | I | 4 (geo) | 20200402 |
| EPI_ISL_487731 | Spike | hCoV-19/Scotland/EDB6009/2020 | V | 171 | F | 27 (geo) | 20200505 |
| EPI_ISL_693223 | Spike | hCoV-19/Brazil/SP-643/2020 | V | 171 | R | 1 | 20200702 |
| EPI_ISL_570051 | Spike | hCoV-19/USA/WA-UW-4583/2020 | V | 171 | D | 1 | 20200331 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | V | 171 | L | 1 | 20201113 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | V | 171 | M | 1 | 20200408 |
| EPI_ISL_430056 | Spike | hCoV-19/USA/UT-0508/2020 | S | 172 | L | 6 (geo) | 20200402 |
| EPI_ISL_476130 | Spike | hCoV-19/Switzerland/GE-ETHZ-140087/2020 | S | 172 | F | 4 (geo) | 20200420 |
| EPI_ISL_654182 | Spike | hCoV-19/Spain/MD-IBV-99008611/2020 | S | 172 | A | 1 | 20200727 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | S | 172 | Q | 1 | 20201014 |
| EPI_ISL_719015 | Spike | hCoV-19/England/CAMC-C3FA3B/2020 | S | 172 | Y | 1 | 20201210 |
| EPI_ISL_784713 | Spike | hCoV-19/USA/TX-HMH-MCoV-18365/2020 | S | 172 | P | 1 | 20201118 |
| EPI_ISL_442265 | Spike | hCoV-19/England/CAMB-7C60D/2020 | Q | 173 | K | 173 (geo) | 20200405 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | Q | 173 | S | 6 (geo) | 20200315 |
| EPI_ISL_631523 | Spike | hCoV-19/USA/NY-NYCPHL-000027/2020 | Q | 173 | L | 5 (geo) | 20200311 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | Q | 173 | P | 16 (geo) | 20201014 |
| EPI_ISL_466065 | Spike | hCoV-19/England/20148036404/2020 | Q | 173 | H | 10 (geo) | 20200401 |
| EPI_ISL_559430 | Spike | hCoV-19/England/ALDP-497899/2020 | Q | 173 | R | 3 (geo) | 20200604 |
| EPI_ISL_570051 | Spike | hCoV-19/USA/WA-UW-4583/2020 | Q | 173 | E | 1 | 20200331 |
| EPI_ISL_541163 | Spike | hCoV-19/USA/FL-BPHL-1240/2020 | P | 174 | S | 41 (geo) | 20200601 |
| EPI_ISL_417671 | Spike | hCoV-19/Iceland/342/2020 | P | 174 | L | 8 (geo) | 20200315 |
| EPI_ISL_447335 | Spike | hCoV-19/Israel/2115980/2020 | P | 174 | H | 6 (geo) | 20200416 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | P | 174 | Q | 3 (geo) | 20200321 |
| EPI_ISL_850575 | Spike | hCoV-19/USA/GA-CDC-STM-322/2021 | P | 174 | R | 1 | 20210102 |
| EPI_ISL_607200 | Spike | hCoV-19/England/ALDP-A6C958/2020 | P | 174 | F | 1 | 20201014 |
| EPI_ISL_634327 | Spike | hCoV-19/England/MILK-ACC90B/2020 | F | 175 | S | 9 (geo) | 20201021 |
| EPI_ISL_624176 | Spike | hCoV-19/Scotland/QEUH-AADCAD/2020 | F | 175 | V | 1 | 20201022 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | F | 175 | L | 5 (geo) | 20200321 |
| EPI_ISL_707989 | Spike | hCoV-19/Germany/SL-SU-10451166/2020 | F | 175 | I | 2 (geo) | 20201015 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | F | 175 | G | 1 | 20201113 |
| EPI_ISL_819390 | Spike | hCoV-19/England/NORW-223B7D/2020 | L | 176 | F | 1370 (geo) | 20200000 |
| EPI_ISL_542119 | Spike | hCoV-19/Italy/LOM-UniMI-L123/2020 | L | 176 | P | 1 | 20200310 |
| EPI_ISL_447676 | Spike | hCoV-19/France/IDF-10050RA/2020 | L | 176 | I | 4 (geo) | 20200300 |
| EPI_ISL_464083 | Spike | hCoV-19/Belgium/rega-0405289/2020 | M | 177 | T | 33 (geo) | 20200405 |
| EPI_ISL_465784 | Spike | hCoV-19/England/20124012404/2020 | M | 177 | I | 212 (geo) | 20200316 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | M | 177 | W | 3 (geo) | 20200420 |
| EPI_ISL_513499 | Spike | hCoV-19/USA/ME-HETL-J0090/2020 | M | 177 | K | 6 (geo) | 20200320 |
| EPI_ISL_450517 | Spike | hCoV-19/Lebanon/S11_765/2020 | M | 177 | R | 2 (geo) | 20200309 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | M | 177 | V | 11 (geo) | 20200321 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | M | 177 | S | 1 | 20201113 |
| EPI_ISL_601357 | Spike | hCoV-19/England/QEUH-9DBEFC/2020 | D | 178 | Y | 2 (geo) | 20200921 |
| EPI_ISL_439908 | Spike | hCoV-19/England/CAMB-72388/2020 | D | 178 | G | 125 (geo) | 20200323 |
| EPI_ISL_560693 | Spike | hCoV-19/England/GSTT-5616/2020 | D | 178 | N | 77 (geo) | 20200322 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | D | 178 | T | 4 (geo) | 20200331 |
| EPI_ISL_784265 | Spike | hCoV-19/USA/TX-HMH-MCoV-8206/2020 | D | 178 | H | 16 (geo) | 20200708 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | D | 178 | V | 1 | 20201113 |
| EPI_ISL_451715 | Spike | hCoV-19/Switzerland/BL-ETHZ-100131/2020 | L | 179 | F | 67 (geo) | 20200316 |
| EPI_ISL_532212 | Spike | hCoV-19/England/QEUH-538969/2020 | L | 179 | P | 5 (geo) | 20200518 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | L | 179 | T | 1 | 20200331 |
| EPI_ISL_469397 | Spike | hCoV-19/England/BRIS-12BD43/2020 | L | 179 | I | 6 (geo) | 20200509 |
| EPI_ISL_692551 | Spike | hCoV-19/Japan/PG-4323/2020 | L | 179 | R | 1 | 20200700 |
| EPI_ISL_654396 | Spike | hCoV-19/Spain/MD-IBV-99009671/2020 | L | 179 | H | 1 | 20201022 |
| EPI_ISL_444236 | Spike | hCoV-19/England/LOND-D5B5E/2020 | E | 180 | V | 98 (geo) | 20200418 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | E | 180 | K | 17 (geo) | 20200321 |
| EPI_ISL_501014 | Spike | hCoV-19/Northern Ireland/NIRE-106625/2020 | E | 180 | G | 24 (geo) | 20200505 |
| EPI_ISL_730219 | Spike | hCoV-19/Mexico/BCN-ALSR-4934/2020 | E | 180 | A | 4 (geo) | 20200826 |
| EPI_ISL_444490 | Spike | hCoV-19/Sweden/KI-CTMR-V300037768-4D/2020 | E | 180 | D | 2 (geo) | 20200300 |
| EPI_ISL_571372 | Spike | hCoV-19/USA/MI-QDX-647/2020 | G | 181 | R | 163 (geo) | 20200319 |
| EPI_ISL_842059 | Spike | hCoV-19/England/PORT-2EB106/2020 | G | 181 | V | 805 (geo) | 20200000 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | G | 181 | E | 8 (geo) | 20200420 |
| EPI_ISL_439573 | Spike | hCoV-19/England/CAMB-7279B/2020 | G | 181 | A | 53 (geo) | 20200323 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | G | 181 | T | 1 | 20200331 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | G | 181 | P | 1 | 20201113 |
| EPI_ISL_831455 | Spike | hCoV-19/Germany/BE-RKI-I-0054/2020 | K | 182 | R | 81 (geo) | 20200000 |
| EPI_ISL_427379 | Spike | hCoV-19/Belgium/ULG-10134/2020 | K | 182 | N | 9 (geo) | 20200408 |
| EPI_ISL_640123 | Spike | hCoV-19/South Africa/NHLS-UCT-GS-2031/2020 | K | 182 | I | 4 (geo) | 20200918 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | K | 182 | T | 4 (geo) | 20200331 |
| EPI_ISL_700408 | Spike | hCoV-19/France/ARA-SC144/2020 | K | 182 | E | 4 (geo) | 20200505 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | K | 182 | L | 1 | 20201113 |
| EPI_ISL_432404 | Spike | hCoV-19/Wales/PHWC-2AFB8/2020 | Q | 183 | R | 35 (geo) | 20200407 |
| EPI_ISL_686021 | Spike | hCoV-19/Japan/PG-2416/2020 | Q | 183 | H | 23 (geo) | 20200300 |
| EPI_ISL_455322 | Spike | hCoV-19/Spain/AN-ISCIII-201623/2020 | Q | 183 | L | 3 (geo) | 20200305 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | Q | 183 | K | 1 | 20200331 |
| EPI_ISL_568498 | Spike | hCoV-19/Iran/K1r-64/2020 | Q | 183 | P | 5 (geo) | 20200325 |
| EPI_ISL_556052 | Spike | hCoV-19/England/ALDP-94CF7B/2020 | Q | 183 | E | 1 | 20200614 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | Q | 183 | V | 1 | 20201113 |
| EPI_ISL_474952 | Spike | hCoV-19/Spain/CM-IBV-003744/2020 | G | 184 | S | 29 (geo) | 20200401 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | G | 184 | V | 44 (geo) | 20200331 |
| EPI_ISL_422298 | Spike | hCoV-19/Wales/PHWC-2656F/2020 | G | 184 | D | 4 (geo) | 20200326 |
| EPI_ISL_700280 | Spike | hCoV-19/India/MH-ACTREC-650/2020 | G | 184 | A | 3 (geo) | 20200914 |
| EPI_ISL_840883 | Spike | hCoV-19/Wales/PHWC-4B30AE/2021 | G | 184 | R | 1 | 20210105 |
| EPI_ISL_492801 | Spike | hCoV-19/England/BRIS-123CA8/2020 | N | 185 | S | 199 (geo) | 20200407 |
| EPI_ISL_418726 | Spike | hCoV-19/England/20124094902/2020 | N | 185 | D | 15 (geo) | 20200313 |
| EPI_ISL_539498 | Spike | hCoV-19/Spain/AN-ISCIII-201618/2020 | N | 185 | I | 8 (geo) | 20200305 |
| EPI_ISL_481371 | Spike | hCoV-19/South Korea/KCDC2051/2020 | N | 185 | K | 4 (geo) | 20200221 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | N | 185 | G | 1 | 20200331 |
| EPI_ISL_426059 | Spike | hCoV-19/USA/ID-UW-2159/2020 | N | 185 | V | 1 | 20200323 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | N | 185 | L | 1 | 20201113 |
| EPI_ISL_511879 | Spike | hCoV-19/Indonesia/JB-TFRIC19-L4173/2020 | N | 185 | Y | 1 | 20200708 |
| EPI_ISL_483102 | Spike | hCoV-19/Australia/SAP322/2020 | F | 186 | L | 22 (geo) | 20200327 |
| EPI_ISL_579323 | Spike | hCoV-19/New Zealand/20VR2656/2020 | F | 186 | S | 30 (geo) | 20200000 |
| EPI_ISL_485053 | Spike | hCoV-19/USA/LA-GBCL-26492497/2020 | F | 186 | V | 5 (geo) | 20200424 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | F | 186 | W | 1 | 20200331 |
| EPI_ISL_737017 | Spike | hCoV-19/Czech Republic/NRL_10875/2020 | F | 186 | Y | 3 (geo) | 20201104 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | F | 186 | P | 1 | 20201113 |
| EPI_ISL_568489 | Spike | hCoV-19/Iran/K1r-62/2020 | K | 187 | Q | 2 (geo) | 20200425 |
| EPI_ISL_724774 | Spike | hCoV-19/England/LOND-DB4C6/2020 | K | 187 | E | 2 (geo) | 20201117 |
| EPI_ISL_454724 | Spike | hCoV-19/USA/UT-02001/2020 | K | 187 | R | 1 | 20200417 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | K | 187 | I | 1 | 20201113 |
| EPI_ISL_568498 | Spike | hCoV-19/Iran/K1r-64/2020 | K | 187 | N | 3 (geo) | 20200325 |
| EPI_ISL_730565 | Spike | hCoV-19/USA/MI-UM-10036869928/2020 | K | 187 | Y | 1 | 20201110 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | N | 188 | I | 3 (geo) | 20200420 |
| EPI_ISL_478669 | Spike | hCoV-19/Turkey/KOC-IST-B303/2020 | N | 188 | K | 2 (geo) | 20200327 |
| EPI_ISL_559688 | Spike | hCoV-19/England/MILK-4882BB/2020 | N | 188 | H | 1 | 20200507 |
| EPI_ISL_683580 | Spike | hCoV-19/England/204841910/2020 | N | 188 | S | 3 (geo) | 20201125 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | N | 188 | V | 1 | 20200331 |
| EPI_ISL_568878 | Spike | hCoV-19/France/PAC-IHU-0594/2020 | N | 188 | Y | 2 (geo) | 20200410 |
| EPI_ISL_751725 | Spike | hCoV-19/USA/MD-CDC-2-3713969/2020 | N | 188 | T | 1 | 20201122 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | N | 188 | G | 1 | 20201113 |
| EPI_ISL_434457 | Spike | hCoV-19/Greece/36/2020 | N | 188 | D | 4 (geo) | 20200328 |
| EPI_ISL_730565 | Spike | hCoV-19/USA/MI-UM-10036869928/2020 | N | 188 | R | 1 | 20201110 |
| EPI_ISL_740989 | Spike | hCoV-19/England/CAMB-1BD906/2020 | L | 189 | F | 516 (geo) | 20200000 |
| EPI_ISL_568484 | Spike | hCoV-19/Iran/K1r-6/2020 | L | 189 | V | 1 | 20200322 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | L | 189 | S | 1 | 20200331 |
| EPI_ISL_419444 | Spike | hCoV-19/Wales/PHWC-246F5/2020 | L | 189 | E | 1 | 20200318 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | L | 189 | I | 1 | 20201113 |
| EPI_ISL_595220 | Spike | hCoV-19/England/NORW-F11F0/2020 | R | 190 | M | 303 (geo) | 20200000 |
| EPI_ISL_467123 | Spike | hCoV-19/Spain/PV-IBV-001523/2020 | R | 190 | K | 34 (geo) | 20200317 |
| EPI_ISL_741715 | Spike | hCoV-19/England/PORT-2EABFA/2020 | R | 190 | S | 55 (geo) | 20200000 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | R | 190 | G | 3 (geo) | 20200420 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | R | 190 | N | 1 | 20201113 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | E | 191 | I | 2 (geo) | 20201113 |
| EPI_ISL_480613 | Spike | hCoV-19/Australia/VIC963/2020 | E | 191 | H | 1 | 20200327 |
| EPI_ISL_545054 | Spike | hCoV-19/USA/TX-HMH-1989/2020 | E | 191 | D | 2 (geo) | 20200519 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | E | 191 | N | 1 | 20200420 |
| EPI_ISL_456453 | Spike | hCoV-19/Australia/VIC1478/2020 | E | 191 | G | 1 | 20200423 |
| EPI_ISL_653177 | Spike | hCoV-19/USA/FL-BPHL-2024/2020 | E | 191 | K | 1 | 20200313 |
| EPI_ISL_856698 | Spike | hCoV-19/Italy/CAM-COTUGNO-53805/2020 | E | 191 | Q | 1 | 20201014 |
| EPI_ISL_528420 | Spike | hCoV-19/India/MH-IGIB-A2/2020 | F | 192 | S | 1 | 20200719 |
| EPI_ISL_789844 | Spike | hCoV-19/USA/TX-HMH-MCoV-12714/2020 | F | 192 | I | 1 | 20200831 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | F | 192 | L | 2 (geo) | 20200420 |
| EPI_ISL_480613 | Spike | hCoV-19/Australia/VIC963/2020 | F | 192 | V | 1 | 20200327 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | F | 192 | R | 1 | 20201113 |
| EPI_ISL_429875 | Spike | hCoV-19/USA/CA-CDPH-UC30/2020 | V | 193 | L | 37 (geo) | 20200302 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | V | 193 | I | 2 (geo) | 20200331 |
| EPI_ISL_591672 | Spike | hCoV-19/Australia/VIC12296/2020 | V | 193 | A | 1 | 20200811 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | V | 193 | C | 1 | 20200420 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | V | 193 | F | 1 | 20201113 |
| EPI_ISL_568484 | Spike | hCoV-19/Iran/K1r-6/2020 | F | 194 | L | 4 (geo) | 20200322 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | F | 194 | Q | 1 | 20201113 |
| EPI_ISL_568487 | Spike | hCoV-19/Iran/K1r-15/2020 | F | 194 | Y | 1 | 20200320 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | K | 195 | V | 1 | 20200331 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | K | 195 | R | 1 | 20200420 |
| EPI_ISL_461539 | Spike | hCoV-19/England/BIRM-5FF50/2020 | K | 195 | N | 1 | 20200000 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | K | 195 | T | 1 | 20201113 |
| EPI_ISL_515249 | Spike | hCoV-19/Ghana/TTH8/2020 | K | 195 | E | 1 | 20200327 |
| EPI_ISL_427289 | Spike | hCoV-19/USA/OH-OSUP0014/2020 | N | 196 | R | 1 | 20200331 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | N | 196 | I | 1 | 20200420 |
| EPI_ISL_775588 | Spike | hCoV-19/Sweden/20-53843/2020 | N | 196 | T | 1 | 20201214 |
| EPI_ISL_542884 | Spike | hCoV-19/USA/TX-HMH-1864/2020 | N | 196 | K | 1 | 20200505 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | N | 196 | L | 1 | 20201113 |
| EPI_ISL_568487 | Spike | hCoV-19/Iran/K1r-15/2020 | N | 196 | D | 1 | 20200320 |
| EPI_ISL_685238 | Spike | hCoV-19/Japan/PG-1632/2020 | I | 197 | V | 129 (geo) | 20200300 |
| EPI_ISL_602108 | Spike | hCoV-19/Scotland/QEUH-9B711B/2020 | I | 197 | T | 4 (geo) | 20200909 |
| EPI_ISL_461189 | Spike | hCoV-19/Netherlands/NoordBrabant_154/2020 | I | 197 | S | 6 (geo) | 20200428 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | I | 197 | M | 1 | 20200420 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | I | 197 | L | 1 | 20201113 |
| EPI_ISL_706875 | Spike | hCoV-19/England/PORT-2E9C43/2020 | D | 198 | G | 246 (geo) | 20200000 |
| EPI_ISL_568484 | Spike | hCoV-19/Iran/K1r-6/2020 | D | 198 | A | 4 (geo) | 20200322 |
| EPI_ISL_476178 | Spike | hCoV-19/Brazil/RJ-L10-CD154/2020 | D | 198 | Y | 18 (geo) | 20200316 |
| EPI_ISL_731815 | Spike | hCoV-19/England/ALDP-C3CB2C/2020 | D | 198 | H | 1 | 20201210 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | D | 198 | E | 3 (geo) | 20200425 |
| EPI_ISL_427231 | Spike | hCoV-19/USA/WA-UW-3992/2020 | D | 198 | N | 3 (geo) | 20200329 |
| EPI_ISL_568496 | Spike | hCoV-19/Iran/K1r-32/2020 | G | 199 | C | 3 (geo) | 20200224 |
| EPI_ISL_596379 | Spike | hCoV-19/Iran/K1r-7/2020 | G | 199 | R | 2 (geo) | 20200300 |
| EPI_ISL_769522 | Spike | hCoV-19/England/QEUH-C5BA39/2020 | G | 199 | V | 1 | 20201214 |
| EPI_ISL_740161 | Spike | hCoV-19/Luxembourg/LNS2642998/2020 | G | 199 | D | 2 (geo) | 20201021 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | G | 199 | L | 1 | 20201113 |
| EPI_ISL_568497 | Spike | hCoV-19/Iran/K1r-54/2020 | Y | 200 | N | 4 (geo) | 20200320 |
| EPI_ISL_706881 | Spike | hCoV-19/England/PORT-2E9D9B/2020 | Y | 200 | C | 9 (geo) | 20200000 |
| EPI_ISL_455218 | Spike | hCoV-19/Netherlands/NA_416/2020 | Y | 200 | H | 8 (geo) | 20200325 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | Y | 200 | V | 1 | 20200420 |
| EPI_ISL_450421 | Spike | hCoV-19/Anhui/HN023/2020 | Y | 200 | S | 2 (geo) | 20200206 |
| EPI_ISL_454421 | Spike | hCoV-19/USA/MDH-5622/2020 | F | 201 | L | 3 (geo) | 20200308 |
| EPI_ISL_466593 | Spike | hCoV-19/England/20168002704/2020 | K | 202 | R | 4 (geo) | 20200416 |
| EPI_ISL_413023 | Spike | hCoV-19/Switzerland/ZH-UZH-1000477797/2020 | K | 202 | N | 3 (geo) | 20200229 |
| EPI_ISL_765693 | Spike | hCoV-19/USA/MA-MGH-03048/2020 | K | 202 | T | 1 | 20200803 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | K | 202 | Q | 2 (geo) | 20200319 |
| EPI_ISL_480788 | Spike | hCoV-19/Senegal/1938/2020 | I | 203 | L | 7 (geo) | 20200331 |
| EPI_ISL_438554 | Spike | hCoV-19/England/CAMB-80FFC/2020 | I | 203 | M | 7 (geo) | 20200420 |
| EPI_ISL_583856 | Spike | hCoV-19/Austria/CeMM1032/2020 | I | 203 | K | 1 | 20200507 |
| EPI_ISL_475707 | Spike | hCoV-19/USA/CA-CSMC90/2020 | I | 203 | T | 2 (geo) | 20200327 |
| EPI_ISL_538874 | Spike | hCoV-19/England/LEED-2A9BE8/2020 | I | 203 | V | 5 (geo) | 20200412 |
| EPI_ISL_672577 | Spike | hCoV-19/Iran/SA-Isf-24/2020 | Y | 204 | I | 2 (geo) | 20200606 |
| EPI_ISL_701786 | Spike | hCoV-19/England/ALDP-BBA8F3/2020 | Y | 204 | H | 5 (geo) | 20201120 |
| EPI_ISL_568502 | Spike | hCoV-19/Iran/K1r-104/2020 | Y | 204 | N | 1 | 20200425 |
| EPI_ISL_568487 | Spike | hCoV-19/Iran/K1r-15/2020 | Y | 204 | S | 1 | 20200320 |
| EPI_ISL_547360 | Spike | hCoV-19/USA/TX-HMH-6279/2020 | S | 205 | A | 2 (geo) | 20200622 |
| EPI_ISL_586434 | Spike | hCoV-19/Canada/ON-S741/2020 | S | 205 | F | 4 (geo) | 20200409 |
| EPI_ISL_455940 | Spike | hCoV-19/Thailand/Bangkok-CONI-0146/2020 | S | 205 | T | 1 | 20200315 |
| EPI_ISL_450518 | Spike | hCoV-19/Latvia/018/2020 | K | 206 | R | 4 (geo) | 20200418 |
| EPI_ISL_568487 | Spike | hCoV-19/Iran/K1r-15/2020 | K | 206 | N | 3 (geo) | 20200320 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | K | 206 | F | 1 | 20200319 |
| EPI_ISL_824386 | Spike | hCoV-19/USA/OH-ODH-SC45734/2020 | K | 206 | M | 1 | 20200623 |
| EPI_ISL_500866 | Spike | hCoV-19/Brazil/PE-IAM17/2020 | H | 207 | Q | 43 (geo) | 20200407 |
| EPI_ISL_556612 | Spike | hCoV-19/England/ALDP-912688/2020 | H | 207 | R | 31 (geo) | 20200622 |
| EPI_ISL_568489 | Spike | hCoV-19/Iran/K1r-62/2020 | H | 207 | L | 4 (geo) | 20200425 |
| EPI_ISL_611086 | Spike | hCoV-19/England/ALDP-A923C4/2020 | H | 207 | Y | 5 (geo) | 20201019 |
| EPI_ISL_591060 | Spike | hCoV-19/Iran/SA-Isf-20/2020 | H | 207 | P | 1 | 20200411 |
| EPI_ISL_523354 | Spike | hCoV-19/Netherlands/NB-EMC-231/2020 | T | 208 | A | 13 (geo) | 20200501 |
| EPI_ISL_537532 | Spike | hCoV-19/USA/CA-UCLA-227/2020 | T | 208 | M | 21 (geo) | 20200515 |
| EPI_ISL_568502 | Spike | hCoV-19/Iran/K1r-104/2020 | T | 208 | S | 9 (geo) | 20200425 |
| EPI_ISL_660114 | Spike | hCoV-19/Iran/SA-Isf-4/2020 | T | 208 | P | 7 (geo) | 20200418 |
| EPI_ISL_734685 | Spike | hCoV-19/Belgium/rega-0429665/2020 | P | 209 | H | 10 (geo) | 20200429 |
| EPI_ISL_493591 | Spike | hCoV-19/England/NOTT-112B54/2020 | P | 209 | L | 5 (geo) | 20200426 |
| EPI_ISL_735482 | Spike | hCoV-19/USA/WA-UW-31428/2020 | P | 209 | R | 1 | 20201014 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | P | 209 | S | 3 (geo) | 20200319 |
| EPI_ISL_766031 | Spike | hCoV-19/Vietnam/40231/2020 | I | 210 | T | 9 (geo) | 20200800 |
| EPI_ISL_694640 | Spike | hCoV-19/USA/AZ-TG379817/2020 | I | 210 | V | 5 (geo) | 20200616 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | I | 210 | S | 1 | 20200000 |
| EPI_ISL_510063 | Spike | hCoV-19/Spain/AN-IBV-004139/2020 | I | 210 | F | 1 | 20200505 |
| EPI_ISL_568496 | Spike | hCoV-19/Iran/K1r-32/2020 | N | 211 | Y | 13 (geo) | 20200224 |
| EPI_ISL_524134 | Spike | hCoV-19/USA/UT-08348/2020 | N | 211 | D | 1 | 20200514 |
| EPI_ISL_496528 | Spike | hCoV-19/India/MH-BJMC-4555/2020 | N | 211 | S | 14 (geo) | 20200519 |
| EPI_ISL_486645 | Spike | hCoV-19/Wuhan/ZY38-1/2020 | N | 211 | K | 3 (geo) | 20200214 |
| EPI_ISL_498574 | Spike | hCoV-19/Singapore/676/2020 | N | 211 | T | 2 (geo) | 20200623 |
| EPI_ISL_568487 | Spike | hCoV-19/Iran/K1r-15/2020 | N | 211 | H | 1 | 20200320 |
| EPI_ISL_433695 | Spike | hCoV-19/England/CAMB-73D98/2020 | L | 212 | I | 13 (geo) | 20200402 |
| EPI_ISL_477032 | Spike | hCoV-19/Canada/BC_22502164/2020 | L | 212 | S | 9 (geo) | 20200400 |
| EPI_ISL_672575 | Spike | hCoV-19/Iran/SA-Isf-12/2020 | V | 213 | G | 8 (geo) | 20200329 |
| EPI_ISL_416746 | Spike | hCoV-19/France/ARA-425/2020 | V | 213 | L | 217 (geo) | 20200303 |
| EPI_ISL_693142 | Spike | hCoV-19/USA/MA-MASPHL-00406/2020 | V | 213 | A | 36 (geo) | 20200425 |
| EPI_ISL_636524 | Spike | hCoV-19/Netherlands/FL-RIVM-10338/2020 | V | 213 | M | 9 (geo) | 20200000 |
| EPI_ISL_610158 | Spike | hCoV-19/Indonesia/YO-UGM-109424/2020 | V | 213 | E | 2 (geo) | 20200826 |
| EPI_ISL_695067 | Spike | hCoV-19/USA/AZ-TG480709/2020 | V | 213 | F | 3 (geo) | 20200708 |
| EPI_ISL_671296 | Spike | hCoV-19/Gibraltar/204841728/2020 | R | 214 | L | 303 (geo) | 20200000 |
| EPI_ISL_801638 | Spike | hCoV-19/Chile/Santiago-PUC_MVL_0048/2020 | R | 214 | H | 35 (geo) | 20200322 |
| EPI_ISL_760951 | Spike | hCoV-19/England/ALDP-CB0759/2020 | - | 214 | T | 6 (geo) | 20201205 |
| EPI_ISL_760951 | Spike | hCoV-19/England/ALDP-CB0759/2020 | - | 214 | D | 6 (geo) | 20201205 |
| EPI_ISL_577098 | Spike | hCoV-19/England/NORW-F03DD/2020 | - | 214 | R | 8 (geo) | 20201004 |
| EPI_ISL_492226 | Spike | hCoV-19/England/BRIS-1853CD2/2020 | R | 214 | C | 7 (geo) | 20200427 |
| EPI_ISL_635200 | Spike | hCoV-19/Slovenia/751/2020 | - | 214 | A | 7 (geo) | 20200305 |
| EPI_ISL_675778 | Spike | hCoV-19/England/MILK-B8C845/2020 | - | 214 | G | 4 (geo) | 20201113 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | R | 214 | P | 6 (geo) | 20200319 |
| EPI_ISL_635200 | Spike | hCoV-19/Slovenia/751/2020 | - | 214 | N | 3 (geo) | 20200305 |
| EPI_ISL_577098 | Spike | hCoV-19/England/NORW-F03DD/2020 | - | 214 | L | 3 (geo) | 20201004 |
| EPI_ISL_577098 | Spike | hCoV-19/England/NORW-F03DD/2020 | - | 214 | V | 2 (geo) | 20201004 |
| EPI_ISL_640892 | Spike | hCoV-19/Australia/VIC12108/2020 | R | 214 | S | 3 (geo) | 20200811 |
| EPI_ISL_635200 | Spike | hCoV-19/Slovenia/751/2020 | - | 214 | K | 3 (geo) | 20200305 |
| EPI_ISL_675778 | Spike | hCoV-19/England/MILK-B8C845/2020 | - | 214 | P | 1 | 20201113 |
| EPI_ISL_770438 | Spike | hCoV-19/England/205261884/2020 | D | 215 | G | 676 (geo) | 20200000 |
| EPI_ISL_764204 | Spike | hCoV-19/England/CAMB-A9873B/2020 | D | 215 | H | 1225 (geo) | 20200000 |
| EPI_ISL_649931 | Spike | hCoV-19/England/204742229/2020 | D | 215 | V | 84 (geo) | 20200000 |
| EPI_ISL_548143 | Spike | hCoV-19/New Zealand/20VR3859/2020 | D | 215 | Y | 274 (geo) | 20200000 |
| EPI_ISL_464566 | Spike | hCoV-19/England/20109045804/2020 | D | 215 | E | 2 (geo) | 20200307 |
| EPI_ISL_447338 | Spike | hCoV-19/Israel/2115964/2020 | D | 215 | N | 6 (geo) | 20200416 |
| EPI_ISL_837992 | Spike | hCoV-19/England/CAMB-A9B808/2020 | L | 216 | F | 210 (geo) | 20200000 |
| EPI_ISL_423558 | Spike | hCoV-19/England/20144071104/2020 | L | 216 | S | 3 (geo) | 20200331 |
| EPI_ISL_454553 | Spike | hCoV-19/India/MH-NIV-8187/2020 | L | 216 | I | 5 (geo) | 20200402 |
| EPI_ISL_712311 | Spike | hCoV-19/Denmark/DCGC-13457/2020 | L | 216 | P | 4 (geo) | 20201130 |
| EPI_ISL_454555 | Spike | hCoV-19/India/MH-NIV-8404/2020 | L | 216 | C | 1 | 20200407 |
| EPI_ISL_568487 | Spike | hCoV-19/Iran/K1r-15/2020 | L | 216 | H | 1 | 20200320 |
| EPI_ISL_641554 | Spike | hCoV-19/France/OCC-SC427/2020 | P | 217 | S | 10 (geo) | 20200413 |
| EPI_ISL_515440 | Spike | hCoV-19/USA/NV-NSPHL-A0183/2020 | P | 217 | L | 2 (geo) | 20200519 |
| EPI_ISL_788019 | Spike | hCoV-19/USA/TX-HMH-MCoV-12866/2020 | P | 217 | H | 1 | 20200818 |
| EPI_ISL_465032 | Spike | hCoV-19/England/20119018404/2020 | P | 217 | T | 1 | 20200311 |
| EPI_ISL_679365 | Spike | hCoV-19/England/EXET-13BDE6/2020 | Q | 218 | H | 215 (geo) | 20200000 |
| EPI_ISL_775730 | Spike | hCoV-19/Germany/HH-hpi-p1512/2020 | Q | 218 | E | 24 (geo) | 20200315 |
| EPI_ISL_437856 | Spike | hCoV-19/USA/WA-UW-6526/2020 | Q | 218 | L | 5 (geo) | 20200405 |
| EPI_ISL_423558 | Spike | hCoV-19/England/20144071104/2020 | Q | 218 | S | 3 (geo) | 20200331 |
| EPI_ISL_486645 | Spike | hCoV-19/Wuhan/ZY38-1/2020 | Q | 218 | R | 9 (geo) | 20200214 |
| EPI_ISL_485603 | Spike | hCoV-19/Austria/MUV_001/2020 | Q | 218 | K | 3 (geo) | 20200414 |
| EPI_ISL_746327 | Spike | hCoV-19/USA/UT-UPHL-2012069160/2020 | Q | 218 | P | 2 (geo) | 20200616 |
| EPI_ISL_626400 | Spike | hCoV-19/USA/IL-NM-0420/2020 | G | 219 | S | 25 (geo) | 20200413 |
| EPI_ISL_686006 | Spike | hCoV-19/Japan/PG-2401/2020 | G | 219 | D | 12 (geo) | 20200400 |
| EPI_ISL_480602 | Spike | hCoV-19/Timor-Leste/TL13/2020 | G | 219 | V | 2 (geo) | 20200412 |
| EPI_ISL_817336 | Spike | hCoV-19/Denmark/DCGC-26657/2020 | G | 219 | C | 2 (geo) | 20201228 |
| EPI_ISL_473003 | Spike | hCoV-19/Wales/PHWC-160A0F/2020 | G | 219 | R | 1 | 20200518 |
| EPI_ISL_555794 | Spike | hCoV-19/England/ALDP-94B97E/2020 | G | 219 | F | 1 | 20200611 |
| EPI_ISL_570077 | Spike | hCoV-19/USA/WA-UW-5776/2020 | F | 220 | L | 70 (geo) | 20200407 |
| EPI_ISL_568486 | Spike | hCoV-19/Iran/K1r-11/2020 | F | 220 | V | 4 (geo) | 20200320 |
| EPI_ISL_479172 | Spike | hCoV-19/England/OXON-B2735/2020 | F | 220 | I | 5 (geo) | 20200413 |
| EPI_ISL_819415 | Spike | hCoV-19/England/NORW-224040/2020 | S | 221 | L | 297 (geo) | 20200000 |
| EPI_ISL_423558 | Spike | hCoV-19/England/20144071104/2020 | S | 221 | F | 4 (geo) | 20200331 |
| EPI_ISL_411929 | Spike | hCoV-19/South Korea/SNU01/2020 | S | 221 | W | 7 (geo) | 20200100 |
| EPI_ISL_448231 | Spike | hCoV-19/England/NORW-E8781/2020 | S | 221 | K | 1 | 20200412 |
| EPI_ISL_423489 | Spike | hCoV-19/England/20144004904/2020 | S | 221 | P | 2 (geo) | 20200331 |
| EPI_ISL_542275 | Spike | hCoV-19/Italy/LOM-UniMI-L328/2020 | S | 221 | A | 1 | 20200302 |
| EPI_ISL_705553 | Spike | hCoV-19/England/CAMB-1BC98F/2020 | A | 222 | V | 94890 (geo) | 20200000 |
| EPI_ISL_460339 | Spike | hCoV-19/USA/MA-MGH-00155/2020 | A | 222 | P | 4 (geo) | 20200326 |
| EPI_ISL_423558 | Spike | hCoV-19/England/20144071104/2020 | A | 222 | G | 3 (geo) | 20200331 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | A | 222 | T | 13 (geo) | 20200319 |
| EPI_ISL_569866 | Spike | hCoV-19/Italy/PIE-SLL-MS45/2020 | A | 222 | S | 28 (geo) | 20200225 |
| EPI_ISL_616474 | Spike | hCoV-19/Denmark/DCGC-2729/2020 | A | 222 | F | 7 (geo) | 20200817 |
| EPI_ISL_592637 | Spike | hCoV-19/Australia/VIC15769/2020 | A | 222 | I | 1 | 20200806 |
| EPI_ISL_423558 | Spike | hCoV-19/England/20144071104/2020 | L | 223 | F | 1 | 20200331 |
| EPI_ISL_672575 | Spike | hCoV-19/Iran/SA-Isf-12/2020 | E | 224 | K | 22 (geo) | 20200329 |
| EPI_ISL_523296 | Spike | hCoV-19/Netherlands/NB-EMC-173/2020 | E | 224 | Q | 36 (geo) | 20200000 |
| EPI_ISL_570077 | Spike | hCoV-19/USA/WA-UW-5776/2020 | E | 224 | V | 1 | 20200407 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | E | 224 | D | 1 | 20200319 |
| EPI_ISL_423558 | Spike | hCoV-19/England/20144071104/2020 | E | 224 | R | 1 | 20200331 |
| EPI_ISL_436437 | Spike | hCoV-19/India/DL-NCDC-3831/2020 | E | 224 | G | 1 | 20200408 |
| EPI_ISL_450510 | Spike | hCoV-19/Lebanon/S3_760/2020 | P | 225 | L | 1 | 20200304 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | P | 225 | R | 1 | 20200319 |
| EPI_ISL_423558 | Spike | hCoV-19/England/20144071104/2020 | P | 225 | T | 1 | 20200331 |
| EPI_ISL_786040 | Spike | hCoV-19/USA/TX-HMH-MCoV-16356/2020 | P | 225 | S | 1 | 20201102 |
| EPI_ISL_842029 | Spike | hCoV-19/England/PORT-2EAD6D/2020 | L | 226 | F | 14 (geo) | 20200000 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | L | 226 | I | 3 (geo) | 20200300 |
| EPI_ISL_486416 | Spike | hCoV-19/Latvia/033/2020 | L | 226 | V | 3 (geo) | 20200427 |
| EPI_ISL_671982 | Spike | hCoV-19/Ecuador/UEES-4142/2020 | V | 227 | I | 8 (geo) | 20200000 |
| EPI_ISL_450510 | Spike | hCoV-19/Lebanon/S3_760/2020 | V | 227 | L | 93 (geo) | 20200304 |
| EPI_ISL_568496 | Spike | hCoV-19/Iran/K1r-32/2020 | V | 227 | A | 16 (geo) | 20200224 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | V | 227 | M | 1 | 20200300 |
| EPI_ISL_423558 | Spike | hCoV-19/England/20144071104/2020 | V | 227 | G | 1 | 20200331 |
| EPI_ISL_423558 | Spike | hCoV-19/England/20144071104/2020 | D | 228 | N | 19 (geo) | 20200331 |
| EPI_ISL_614420 | Spike | hCoV-19/Denmark/DCGC-1176/2020 | D | 228 | Y | 5 (geo) | 20200316 |
| EPI_ISL_445152 | Spike | hCoV-19/USA/LA-SR0297/2020 | D | 228 | H | 14 (geo) | 20200408 |
| EPI_ISL_788588 | Spike | hCoV-19/USA/TX-HMH-MCoV-13453/2020 | D | 228 | V | 2 (geo) | 20200821 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | D | 228 | I | 1 | 20200300 |
| EPI_ISL_434835 | Spike | hCoV-19/USA/TX-HMH0135/2020 | D | 228 | E | 4 (geo) | 20200321 |
| EPI_ISL_450510 | Spike | hCoV-19/Lebanon/S3_760/2020 | L | 229 | F | 52 (geo) | 20200304 |
| EPI_ISL_450510 | Spike | hCoV-19/Lebanon/S3_760/2020 | P | 230 | L | 2 (geo) | 20200304 |
| EPI_ISL_723080 | Spike | hCoV-19/Germany/BW-UKT-a021/2020 | I | 231 | M | 9 (geo) | 20200408 |
| EPI_ISL_524908 | Spike | hCoV-19/USA/UT-UPHL-2009299/2020 | I | 231 | T | 4 (geo) | 20200514 |
| EPI_ISL_568495 | Spike | hCoV-19/Iran/K1r-29/2020 | I | 231 | L | 7 (geo) | 20200220 |
| EPI_ISL_734307 | Spike | hCoV-19/USA/NY-Wadsworth-210267-01/2020 | I | 231 | V | 3 (geo) | 20200903 |
| EPI_ISL_419444 | Spike | hCoV-19/Wales/PHWC-246F5/2020 | G | 232 | V | 11 (geo) | 20200318 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | G | 232 | C | 13 (geo) | 20200319 |
| EPI_ISL_623066 | Spike | hCoV-19/South Africa/N00060/2020 | G | 232 | R | 1 | 20200812 |
| EPI_ISL_786936 | Spike | hCoV-19/USA/TX-HMH-MCoV-15452/2020 | G | 232 | S | 1 | 20201024 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | G | 232 | L | 1 | 20200501 |
| EPI_ISL_475892 | Spike | hCoV-19/Austria/CeMM0520/2020 | I | 233 | V | 393 (geo) | 20200331 |
| EPI_ISL_419444 | Spike | hCoV-19/Wales/PHWC-246F5/2020 | I | 233 | M | 3 (geo) | 20200318 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | I | 233 | K | 1 | 20200501 |
| EPI_ISL_429604 | Spike | hCoV-19/USA/WA-UW-4568/2020 | I | 233 | R | 1 | 20200329 |
| EPI_ISL_480613 | Spike | hCoV-19/Australia/VIC963/2020 | N | 234 | T | 1 | 20200327 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | N | 234 | Y | 3 (geo) | 20200319 |
| EPI_ISL_419444 | Spike | hCoV-19/Wales/PHWC-246F5/2020 | N | 234 | K | 3 (geo) | 20200318 |
| EPI_ISL_568487 | Spike | hCoV-19/Iran/K1r-15/2020 | N | 234 | S | 3 (geo) | 20200320 |
| EPI_ISL_854078 | Spike | hCoV-19/Austria/CeMM1650/2020 | I | 235 | T | 5 (geo) | 20200000 |
| EPI_ISL_570608 | Spike | hCoV-19/USA/WA-UW-24890/2020 | I | 235 | F | 1 | 20200810 |
| EPI_ISL_480613 | Spike | hCoV-19/Australia/VIC963/2020 | I | 235 | L | 1 | 20200327 |
| EPI_ISL_469101 | Spike | hCoV-19/Singapore/346/2020 | I | 235 | N | 1 | 20200408 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | I | 235 | V | 3 (geo) | 20200501 |
| EPI_ISL_493410 | Spike | hCoV-19/Singapore/650/2020 | T | 236 | S | 3 (geo) | 20200413 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | T | 236 | I | 3 (geo) | 20200100 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | T | 236 | N | 1 | 20200501 |
| EPI_ISL_548135 | Spike | hCoV-19/New Zealand/20VR3792/2020 | R | 237 | K | 34 (geo) | 20200000 |
| EPI_ISL_582958 | Spike | hCoV-19/USA/CA-CZB-11018/2020 | R | 237 | S | 12 (geo) | 20200828 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | R | 237 | N | 2 (geo) | 20200100 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | R | 237 | F | 1 | 20200501 |
| EPI_ISL_591061 | Spike | hCoV-19/Iran/SA-Isf-21/2020 | F | 238 | V | 1 | 20200410 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | F | 238 | Y | 2 (geo) | 20200100 |
| EPI_ISL_672586 | Spike | hCoV-19/Iran/SA-Isf-34/2020 | F | 238 | I | 1 | 20200519 |
| EPI_ISL_479356 | Spike | hCoV-19/Wales/PHWC-164BBD/2020 | F | 238 | L | 1 | 20200421 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | F | 238 | N | 1 | 20200501 |
| EPI_ISL_440154 | Spike | hCoV-19/England/BRIS-12174F/2020 | Q | 239 | K | 19 (geo) | 20200302 |
| EPI_ISL_434549 | Spike | hCoV-19/Puerto Rico/CDC-S9/2020 | Q | 239 | R | 3 (geo) | 20200323 |
| EPI_ISL_435463 | Spike | hCoV-19/USA/LA-SR0160/2020 | Q | 239 | H | 4 (geo) | 20200328 |
| EPI_ISL_591061 | Spike | hCoV-19/Iran/SA-Isf-21/2020 | Q | 239 | P | 1 | 20200410 |
| EPI_ISL_480613 | Spike | hCoV-19/Australia/VIC963/2020 | Q | 239 | S | 1 | 20200327 |
| EPI_ISL_479356 | Spike | hCoV-19/Wales/PHWC-164BBD/2020 | Q | 239 | L | 1 | 20200421 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | Q | 239 | F | 1 | 20200501 |
| EPI_ISL_853789 | Spike | hCoV-19/Austria/CeMM1604/2020 | T | 240 | I | 128 (geo) | 20200000 |
| EPI_ISL_424650 | Spike | hCoV-19/Belgium/ULG-10094/2020 | T | 240 | P | 2 (geo) | 20200404 |
| EPI_ISL_582004 | Spike | hCoV-19/Iran/SA-Isf-13/2020 | T | 240 | S | 20 (geo) | 20200410 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | T | 240 | M | 2 (geo) | 20200100 |
| EPI_ISL_479356 | Spike | hCoV-19/Wales/PHWC-164BBD/2020 | T | 240 | A | 1 | 20200421 |
| EPI_ISL_426757 | Spike | hCoV-19/Australia/VIC464/2020 | T | 240 | Q | 1 | 20200326 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | T | 240 | V | 1 | 20200501 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | L | 241 | I | 3 (geo) | 20200100 |
| EPI_ISL_444004 | Spike | hCoV-19/England/BRIS-124797/2020 | L | 241 | V | 1 | 20200325 |
| EPI_ISL_780439 | Spike | hCoV-19/USA/TX-HMH-MCoV-8679/2020 | L | 241 | S | 2 (geo) | 20200702 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | L | 241 | M | 1 | 20200501 |
| EPI_ISL_452955 | Spike | hCoV-19/England/CAMB-1B0C64/2020 | L | 242 | F | 52 (geo) | 20200000 |
| EPI_ISL_509612 | Spike | hCoV-19/Spain/PV-IBV-005165/2020 | L | 242 | P | 20 (geo) | 20200624 |
| EPI_ISL_580563 | Spike | hCoV-19/England/ALDP-9E7279/2020 | L | 242 | V | 2 (geo) | 20200924 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | L | 242 | I | 5 (geo) | 20200501 |
| EPI_ISL_479356 | Spike | hCoV-19/Wales/PHWC-164BBD/2020 | L | 242 | H | 1 | 20200421 |
| EPI_ISL_663362 | Spike | hCoV-19/Australia/VIC17676/2020 | L | 242 | R | 1 | 20200813 |
| EPI_ISL_855289 | Spike | hCoV-19/USA/NY-WCM-0385-1-P/2020 | A | 243 | S | 154 (geo) | 20200315 |
| EPI_ISL_679976 | Spike | hCoV-19/England/PORT-2E9F77/2020 | A | 243 | V | 37 (geo) | 20200000 |
| EPI_ISL_672597 | Spike | hCoV-19/Iran/SA-Isf-45/2020 | A | 243 | D | 2 (geo) | 20200615 |
| EPI_ISL_481572 | Spike | hCoV-19/Finland/17A10S4/2020 | A | 243 | P | 2 (geo) | 20200417 |
| EPI_ISL_707979 | Spike | hCoV-19/Germany/SL-SU-10450618/2020 | A | 243 | T | 2 (geo) | 20201013 |
| EPI_ISL_724947 | Spike | hCoV-19/England/NORT-1B79FBC/2020 | A | 243 | G | 1 | 20201123 |
| EPI_ISL_430060 | Spike | hCoV-19/USA/UT-0514/2020 | A | 243 | L | 1 | 20200403 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | A | 243 | H | 2 (geo) | 20200501 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | L | 244 | I | 5 (geo) | 20200323 |
| EPI_ISL_481572 | Spike | hCoV-19/Finland/17A10S4/2020 | L | 244 | F | 20 (geo) | 20200417 |
| EPI_ISL_659400 | Spike | hCoV-19/England/CAMC-B33115/2020 | L | 244 | S | 4 (geo) | 20201105 |
| EPI_ISL_691492 | Spike | hCoV-19/Japan/PG-3377/2020 | L | 244 | V | 3 (geo) | 20200400 |
| EPI_ISL_455577 | Spike | hCoV-19/USA/IA-GMF-3912/2020 | L | 244 | R | 1 | 20200520 |
| EPI_ISL_496808 | Spike | hCoV-19/Panama/335166/2020 | L | 244 | Q | 1 | 20200401 |
| EPI_ISL_512372 | Spike | hCoV-19/England/NORW-EF034/2020 | H | 245 | Y | 341 (geo) | 20200000 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | H | 245 | L | 5 (geo) | 20200323 |
| EPI_ISL_467842 | Spike | hCoV-19/USA/CA-QDX-78/2020 | H | 245 | R | 18 (geo) | 20200316 |
| EPI_ISL_739659 | Spike | hCoV-19/Palestine/AAS24/2020 | H | 245 | N | 8 (geo) | 20201129 |
| EPI_ISL_786063 | Spike | hCoV-19/USA/TX-HMH-MCoV-16379/2020 | H | 245 | D | 2 (geo) | 20201102 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | H | 245 | W | 1 | 20200501 |
| EPI_ISL_441120 | Spike | hCoV-19/England/CAMB-77F61/2020 | R | 246 | K | 13 (geo) | 20200401 |
| EPI_ISL_853768 | Spike | hCoV-19/Austria/CeMM1952/2020 | R | 246 | I | 101 (geo) | 20200000 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | - | 246 | H | 18 (geo) | 20200628 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | - | 246 | R | 16 (geo) | 20200628 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | R | 246 | L | 5 (geo) | 20200323 |
| EPI_ISL_821435 | Spike | hCoV-19/England/CAMC-E5257B/2021 | - | 246 | D | 1 | 20210102 |
| EPI_ISL_821435 | Spike | hCoV-19/England/CAMC-E5257B/2021 | - | 246 | S | 1 | 20210102 |
| EPI_ISL_821435 | Spike | hCoV-19/England/CAMC-E5257B/2021 | - | 246 | W | 1 | 20210102 |
| EPI_ISL_821435 | Spike | hCoV-19/England/CAMC-E5257B/2021 | - | 246 | G | 1 | 20210102 |
| EPI_ISL_539883 | Spike | hCoV-19/Sweden/20-52156/2020 | R | 246 | T | 16 (geo) | 20200624 |
| EPI_ISL_486458 | Spike | hCoV-19/Switzerland/BE-ETHZ-110018/2020 | R | 246 | S | 6 (geo) | 20200401 |
| EPI_ISL_696507 | Spike | hCoV-19/South Africa/NHLS-UCT-GS-7036-KRISP/2020 | - | 246 | I | 2 (geo) | 20201124 |
| EPI_ISL_723046 | Spike | hCoV-19/India/MH-ACTREC-169/2020 | - | 246 | Y | 1 | 20200608 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | R | 246 | V | 1 | 20200501 |
| EPI_ISL_582301 | Spike | hCoV-19/Canada/MB-NML-657/2020 | S | 247 | I | 11 (geo) | 20200328 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | S | 247 | Q | 5 (geo) | 20200323 |
| EPI_ISL_532239 | Spike | hCoV-19/England/QEUH-52DD3E/2020 | S | 247 | G | 28 (geo) | 20200518 |
| EPI_ISL_436484 | Spike | hCoV-19/USA/PA-MGSC35-05/2020 | S | 247 | N | 23 (geo) | 20200327 |
| EPI_ISL_406844 | Spike | hCoV-19/Australia/VIC01/2020 | S | 247 | R | 9 (geo) | 20200125 |
| EPI_ISL_623155 | Spike | hCoV-19/Brazil/RJ-00352/2020 | S | 247 | C | 1 | 20200511 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | Y | 248 | V | 5 (geo) | 20200323 |
| EPI_ISL_436484 | Spike | hCoV-19/USA/PA-MGSC35-05/2020 | Y | 248 | S | 10 (geo) | 20200327 |
| EPI_ISL_420726 | Spike | hCoV-19/England/20139058604/2020 | - | 248 | H | 1 | 20200327 |
| EPI_ISL_420726 | Spike | hCoV-19/England/20139058604/2020 | - | 248 | Q | 1 | 20200327 |
| EPI_ISL_420726 | Spike | hCoV-19/England/20139058604/2020 | - | 248 | N | 1 | 20200327 |
| EPI_ISL_418885 | Spike | hCoV-19/USA/WA-UW318/2020 | Y | 248 | H | 25 (geo) | 20200314 |
| EPI_ISL_583430 | Spike | hCoV-19/USA/NY-MSK-2B/2020 | Y | 248 | F | 4 (geo) | 20200423 |
| EPI_ISL_672598 | Spike | hCoV-19/Iran/SA-Isf-46/2020 | Y | 248 | P | 1 | 20200624 |
| EPI_ISL_474976 | Spike | hCoV-19/Israel/CVL-n-6731/2020 | Y | 248 | C | 1 | 20200409 |
| EPI_ISL_419231 | Spike | hCoV-19/Hong Kong/HKPU63-1402/2020 | L | 249 | F | 14 (geo) | 20200219 |
| EPI_ISL_412971 | Spike | hCoV-19/Finland/FIN-25/2020 | L | 249 | S | 44 (geo) | 20200225 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | L | 249 | C | 1 | 20200425 |
| EPI_ISL_461522 | Spike | hCoV-19/England/BIRM-5F64C/2020 | T | 250 | N | 20 (geo) | 20200000 |
| EPI_ISL_475693 | Spike | hCoV-19/USA/CA-CSMC78/2020 | T | 250 | I | 20 (geo) | 20200326 |
| EPI_ISL_548911 | Spike | hCoV-19/Canada/ON-PHL-20-01308/2020 | T | 250 | A | 2 (geo) | 20200600 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | T | 250 | F | 1 | 20200300 |
| EPI_ISL_637089 | Spike | hCoV-19/New Zealand/20CV0537/2020 | T | 250 | S | 6 (geo) | 20201106 |
| EPI_ISL_760246 | Spike | hCoV-19/North Macedonia/ZMC6172/2020 | T | 250 | L | 1 | 20200605 |
| EPI_ISL_448637 | Spike | hCoV-19/England/OXON-ADDD1/2020 | P | 251 | S | 91 (geo) | 20200000 |
| EPI_ISL_472490 | Spike | hCoV-19/Wales/PHWC-15C462/2020 | P | 251 | L | 56 (geo) | 20200326 |
| EPI_ISL_448734 | Spike | hCoV-19/England/OXON-AE927/2020 | P | 251 | H | 56 (geo) | 20200000 |
| EPI_ISL_572370 | Spike | hCoV-19/Brazil/PE-IAM981/2020 | P | 251 | R | 2 (geo) | 20200506 |
| EPI_ISL_419858 | Spike | hCoV-19/Australia/VIC161/2020 | P | 251 | D | 1 | 20200318 |
| EPI_ISL_491297 | Spike | hCoV-19/Portugal/R998/2020 | G | 252 | D | 9 (geo) | 20200603 |
| EPI_ISL_760246 | Spike | hCoV-19/North Macedonia/ZMC6172/2020 | G | 252 | V | 42 (geo) | 20200605 |
| EPI_ISL_419858 | Spike | hCoV-19/Australia/VIC161/2020 | G | 252 | S | 19 (geo) | 20200318 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | G | 252 | E | 1 | 20200321 |
| EPI_ISL_840789 | Spike | hCoV-19/Wales/PHWC-4B283E/2020 | D | 253 | G | 1144 (geo) | 20200000 |
| EPI_ISL_538979 | Spike | hCoV-19/England/LEED-2AA6F5/2020 | D | 253 | N | 17 (geo) | 20200401 |
| EPI_ISL_474536 | Spike | hCoV-19/Wales/PHWC-35B98/2020 | D | 253 | V | 12 (geo) | 20200427 |
| EPI_ISL_447752 | Spike | hCoV-19/Colombia/HUI-GUR-0900/2020 | D | 253 | Y | 30 (geo) | 20200330 |
| EPI_ISL_542670 | Spike | hCoV-19/USA/TX-HMH-1361/2020 | D | 253 | A | 6 (geo) | 20200501 |
| EPI_ISL_872370 | Spike | hCoV-19/USA/TX-DSHS-2230/2020 | - | 253 | S | 4 (geo) | 20201220 |
| EPI_ISL_419858 | Spike | hCoV-19/Australia/VIC161/2020 | D | 253 | T | 1 | 20200318 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | D | 253 | F | 1 | 20200321 |
| EPI_ISL_760246 | Spike | hCoV-19/North Macedonia/ZMC6172/2020 | D | 253 | I | 1 | 20200605 |
| EPI_ISL_519961 | Spike | hCoV-19/Australia/VIC5196/2020 | S | 254 | F | 471 (geo) | 20200000 |
| EPI_ISL_796124 | Spike | hCoV-19/Spain/VC-IBV-98004590/2020 | S | 254 | Y | 11 (geo) | 20200405 |
| EPI_ISL_829001 | Spike | hCoV-19/Iceland/5317/2020 | S | 254 | P | 2 (geo) | 20200819 |
| EPI_ISL_826017 | Spike | hCoV-19/Canada/Qc-JEW-Q8292502/2020 | S | 254 | A | 1 | 20200429 |
| EPI_ISL_511950 | Spike | hCoV-19/India/KA-IB60/2020 | S | 254 | C | 1 | 20200619 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | S | 254 | V | 1 | 20200321 |
| EPI_ISL_760246 | Spike | hCoV-19/North Macedonia/ZMC6172/2020 | S | 254 | L | 2 (geo) | 20200605 |
| EPI_ISL_816662 | Spike | hCoV-19/England/TFCI-26F95E1/2020 | S | 255 | F | 872 (geo) | 20200000 |
| EPI_ISL_635056 | Spike | hCoV-19/South Africa/KRISP-K004080/2020 | S | 255 | Y | 5 (geo) | 20201019 |
| EPI_ISL_466206 | Spike | hCoV-19/England/20149052404/2020 | S | 255 | P | 7 (geo) | 20200404 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | S | 255 | T | 1 | 20201023 |
| EPI_ISL_419444 | Spike | hCoV-19/Wales/PHWC-246F5/2020 | S | 255 | D | 1 | 20200318 |
| EPI_ISL_760246 | Spike | hCoV-19/North Macedonia/ZMC6172/2020 | S | 255 | L | 1 | 20200605 |
| EPI_ISL_679318 | Spike | hCoV-19/England/EXET-139A78/2020 | S | 256 | L | 1094 (geo) | 20200000 |
| EPI_ISL_494367 | Spike | hCoV-19/Wales/PHWC-168DD1/2020 | S | 256 | F | 1 | 20200417 |
| EPI_ISL_564014 | Spike | hCoV-19/Australia/VIC6725/2020 | S | 256 | P | 36 (geo) | 20200000 |
| EPI_ISL_419444 | Spike | hCoV-19/Wales/PHWC-246F5/2020 | S | 256 | K | 2 (geo) | 20200318 |
| EPI_ISL_560312 | Spike | hCoV-19/Russia/SVE-RII-MH198S/2020 | G | 257 | V | 52 (geo) | 20200717 |
| EPI_ISL_457719 | Spike | hCoV-19/Estonia/ChVir4261/2020 | G | 257 | S | 47 (geo) | 20200300 |
| EPI_ISL_842044 | Spike | hCoV-19/England/PORT-2EAEB5/2020 | G | 257 | D | 116 (geo) | 20200000 |
| EPI_ISL_446350 | Spike | hCoV-19/Wales/PHWC-30CE5/2020 | G | 257 | R | 8 (geo) | 20200412 |
| EPI_ISL_745865 | Spike | hCoV-19/USA/UT-UPHL-2012621057/2020 | G | 257 | C | 3 (geo) | 20200810 |
| EPI_ISL_832892 | Spike | hCoV-19/USA/ME-HETL-J0576/2020 | G | 257 | T | 1 | 20201230 |
| EPI_ISL_519460 | Spike | hCoV-19/Australia/VIC4078/2020 | G | 257 | W | 1 | 20200711 |
| EPI_ISL_833007 | Spike | hCoV-19/USA/ME-HETL-J0723/2021 | G | 257 | A | 1 | 20210106 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | G | 257 | N | 1 | 20200321 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | W | 258 | L | 246 (geo) | 20200000 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | W | 258 | G | 5 (geo) | 20200323 |
| EPI_ISL_511527 | Spike | hCoV-19/Portugal/PT0978/2020 | W | 258 | C | 18 (geo) | 20200330 |
| EPI_ISL_778698 | Spike | hCoV-19/Italy/CAM-TIGEM-566/2020 | W | 258 | R | 36 (geo) | 20200403 |
| EPI_ISL_457860 | Spike | hCoV-19/Kenya/C1401/2020 | W | 258 | S | 4 (geo) | 20200420 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | W | 258 | I | 1 | 20200321 |
| EPI_ISL_703130 | Spike | hCoV-19/England/ALDP-BB991F/2020 | W | 258 | F | 1 | 20201120 |
| EPI_ISL_831334 | Spike | hCoV-19/USA/NC-UNC-0026/2020 | T | 259 | I | 26 (geo) | 20200400 |
| EPI_ISL_419444 | Spike | hCoV-19/Wales/PHWC-246F5/2020 | T | 259 | Q | 6 (geo) | 20200318 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | T | 259 | D | 2 (geo) | 20200321 |
| EPI_ISL_861457 | Spike | hCoV-19/Belarus/ChVir21841/2020 | T | 259 | S | 1 | 20201021 |
| EPI_ISL_576822 | Spike | hCoV-19/England/ALDP-9D9E49/2020 | T | 259 | K | 2 (geo) | 20200918 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | A | 260 | L | 5 (geo) | 20200323 |
| EPI_ISL_451941 | Spike | hCoV-19/Germany/BY-MVP-0124/2020 | A | 260 | S | 20 (geo) | 20200323 |
| EPI_ISL_440532 | Spike | hCoV-19/England/CAMB-848C0/2020 | - | 260 | G | 9 (geo) | 20200305 |
| EPI_ISL_511000 | Spike | hCoV-19/Portugal/PT0741/2020 | A | 260 | V | 14 (geo) | 20200322 |
| EPI_ISL_841947 | Spike | hCoV-19/England/PORT-2E2390/2020 | A | 260 | T | 5 (geo) | 20200000 |
| EPI_ISL_419444 | Spike | hCoV-19/Wales/PHWC-246F5/2020 | A | 260 | G | 2 (geo) | 20200318 |
| EPI_ISL_826595 | Spike | hCoV-19/USA/NY-AECOM_003/2020 | A | 260 | D | 2 (geo) | 20200415 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | - | 260 | A | 2 (geo) | 20200317 |
| EPI_ISL_576903 | Spike | hCoV-19/England/CAMB-1B63D2/2020 | G | 261 | V | 465 (geo) | 20200000 |
| EPI_ISL_513313 | Spike | hCoV-19/Cuba/USAFSAM-S031/2020 | G | 261 | S | 127 (geo) | 20200324 |
| EPI_ISL_455391 | Spike | hCoV-19/Wuhan/HB-WH5-228/2020 | G | 261 | R | 120 (geo) | 20200204 |
| EPI_ISL_766325 | Spike | hCoV-19/Gibraltar/205121195/2020 | G | 261 | C | 16 (geo) | 20200000 |
| EPI_ISL_571482 | Spike | hCoV-19/USA/TX-QDX-668/2020 | G | 261 | D | 21 (geo) | 20200318 |
| EPI_ISL_440532 | Spike | hCoV-19/England/CAMB-848C0/2020 | G | 261 | A | 3 (geo) | 20200305 |
| EPI_ISL_541636 | Spike | hCoV-19/USA/WI-UW-1510/2020 | G | 261 | F | 1 | 20200916 |
| EPI_ISL_728237 | Spike | hCoV-19/Morocco/RMPS-23/2020 | G | 261 | H | 1 | 20200401 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | G | 261 | Y | 1 | 20200321 |
| EPI_ISL_812768 | Spike | hCoV-19/Turkey/HSGM-1167/2020 | G | 261 | W | 1 | 20201229 |
| EPI_ISL_706880 | Spike | hCoV-19/England/PORT-2E9D31/2020 | A | 262 | S | 4853 (geo) | 20200000 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | A | 262 | L | 5 (geo) | 20200323 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | A | 262 | T | 32 (geo) | 20200300 |
| EPI_ISL_848137 | Spike | hCoV-19/Ireland/D-20G47000/2020 | A | 262 | V | 13 (geo) | 20200330 |
| EPI_ISL_468096 | Spike | hCoV-19/USA/OR-OHSU-0079/2020 | A | 262 | D | 4 (geo) | 20200424 |
| EPI_ISL_532899 | Spike | hCoV-19/England/QEUH-7EB7A5/2020 | A | 262 | P | 1 | 20200718 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | A | 262 | F | 1 | 20200321 |
| EPI_ISL_784249 | Spike | hCoV-19/USA/TX-HMH-MCoV-8180/2020 | A | 262 | G | 1 | 20200707 |
| EPI_ISL_837876 | Spike | hCoV-19/England/CAMB-A9A5F3/2020 | A | 263 | S | 76 (geo) | 20200000 |
| EPI_ISL_434724 | Spike | hCoV-19/USA/TX-HMH014/2020 | A | 263 | V | 24 (geo) | 20200314 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | A | 263 | Q | 5 (geo) | 20200323 |
| EPI_ISL_468818 | Spike | hCoV-19/Spain/AR-IBV-2437/2020 | A | 263 | T | 42 (geo) | 20200318 |
| EPI_ISL_528626 | Spike | hCoV-19/India/TG-CDFD-N5349/2020 | A | 263 | E | 3 (geo) | 20200531 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | A | 263 | K | 1 | 20200321 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | A | 264 | L | 5 (geo) | 20200323 |
| EPI_ISL_584461 | Spike | hCoV-19/England/CWAR-24FD9C5/2020 | A | 264 | S | 11 (geo) | 20200502 |
| EPI_ISL_440532 | Spike | hCoV-19/England/CAMB-848C0/2020 | A | 264 | Y | 3 (geo) | 20200305 |
| EPI_ISL_776362 | Spike | hCoV-19/Germany/HH-hpi-p2119/2020 | A | 264 | V | 10 (geo) | 20200322 |
| EPI_ISL_812768 | Spike | hCoV-19/Turkey/HSGM-1167/2020 | A | 264 | G | 3 (geo) | 20201229 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | A | 264 | I | 1 | 20200321 |
| EPI_ISL_672607 | Spike | hCoV-19/Iran/SA-Isf-50/2020 | A | 264 | C | 1 | 20200806 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | Y | 265 | I | 5 (geo) | 20200323 |
| EPI_ISL_832892 | Spike | hCoV-19/USA/ME-HETL-J0576/2020 | Y | 265 | W | 1 | 20201230 |
| EPI_ISL_790483 | Spike | hCoV-19/USA/TX-HMH-MCoV-12720/2020 | Y | 265 | H | 2 (geo) | 20200829 |
| EPI_ISL_434536 | Spike | hCoV-19/Costa Rica/03/2020 | Y | 265 | N | 1 | 20200317 |
| EPI_ISL_434199 | Spike | hCoV-19/USA/WA-S439/2020 | Y | 265 | C | 1 | 20200402 |
| EPI_ISL_812768 | Spike | hCoV-19/Turkey/HSGM-1167/2020 | Y | 265 | A | 1 | 20201229 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | Y | 266 | M | 5 (geo) | 20200323 |
| EPI_ISL_531561 | Spike | hCoV-19/England/QEUH-96A724/2020 | Y | 266 | H | 6 (geo) | 20200813 |
| EPI_ISL_729535 | Spike | hCoV-19/Germany/SH-ChVir3184/2020 | Y | 266 | C | 6 (geo) | 20200321 |
| EPI_ISL_465148 | Spike | hCoV-19/England/20120008004/2020 | Y | 266 | S | 2 (geo) | 20200314 |
| EPI_ISL_707990 | Spike | hCoV-19/Germany/SL-SU-10451186/2020 | Y | 266 | F | 1 | 20201015 |
| EPI_ISL_812768 | Spike | hCoV-19/Turkey/HSGM-1167/2020 | Y | 266 | A | 1 | 20201229 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | V | 267 | W | 5 (geo) | 20200323 |
| EPI_ISL_460458 | Spike | hCoV-19/USA/MA-MGH-00525/2020 | V | 267 | L | 18 (geo) | 20200318 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | V | 267 | K | 1 | 20200321 |
| EPI_ISL_466380 | Spike | hCoV-19/England/201620008/2020 | V | 267 | A | 2 (geo) | 20200413 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | G | 268 | V | 7 (geo) | 20200323 |
| EPI_ISL_507007 | Spike | hCoV-19/Iran/IRVSH-01/2020 | G | 268 | D | 1 | 20200501 |
| EPI_ISL_786489 | Spike | hCoV-19/USA/TX-HMH-MCoV-15005/2020 | G | 268 | S | 1 | 20201015 |
| EPI_ISL_803208 | Spike | hCoV-19/USA/WI-WSLH-200880/2020 | G | 268 | C | 1 | 20201006 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | G | 268 | H | 1 | 20200321 |
| EPI_ISL_812768 | Spike | hCoV-19/Turkey/HSGM-1167/2020 | G | 268 | Y | 1 | 20201229 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | Y | 269 | I | 5 (geo) | 20200323 |
| EPI_ISL_684482 | Spike | hCoV-19/Japan/PG-0872/2020 | Y | 269 | H | 8 (geo) | 20200000 |
| EPI_ISL_534941 | Spike | hCoV-19/England/OXON-B4232/2020 | Y | 269 | C | 1 | 20200526 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | Y | 269 | T | 1 | 20200321 |
| EPI_ISL_632020 | Spike | hCoV-19/USA/NY-NYCPHL-000561/2020 | Y | 269 | N | 1 | 20200327 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | L | 270 | F | 6 (geo) | 20200323 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | L | 270 | P | 1 | 20200321 |
| EPI_ISL_596384 | Spike | hCoV-19/Iran/K1r-117/2020 | Q | 271 | H | 5 (geo) | 20200500 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | Q | 271 | N | 5 (geo) | 20200323 |
| EPI_ISL_426414 | Spike | hCoV-19/India/GJ-GBRC1/2020 | Q | 271 | R | 12 (geo) | 20200405 |
| EPI_ISL_788736 | Spike | hCoV-19/USA/TX-HMH-MCoV-13630/2020 | Q | 271 | L | 4 (geo) | 20200820 |
| EPI_ISL_798958 | Spike | hCoV-19/England/CAMC-D34FEB/2020 | Q | 271 | K | 4 (geo) | 20201226 |
| EPI_ISL_846723 | Spike | hCoV-19/USA/MI-UM-10036939209/2020 | Q | 271 | E | 1 | 20201113 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | Q | 271 | I | 1 | 20200321 |
| EPI_ISL_706880 | Spike | hCoV-19/England/PORT-2E9D31/2020 | P | 272 | L | 3468 (geo) | 20200000 |
| EPI_ISL_677747 | Spike | hCoV-19/Hungary/US-32401w/2020 | P | 272 | H | 27 (geo) | 20200902 |
| EPI_ISL_698999 | Spike | hCoV-19/United Arab Emirates/0860/2020 | P | 272 | R | 1 | 20200519 |
| EPI_ISL_457412 | Spike | hCoV-19/England/NORW-EB26F/2020 | P | 272 | S | 3 (geo) | 20200501 |
| EPI_ISL_456827 | Spike | hCoV-19/Scotland/CVR3402/2020 | P | 272 | T | 5 (geo) | 20200509 |
| EPI_ISL_763789 | Spike | hCoV-19/England/PORT-2E9047/2020 | P | 272 | F | 7 (geo) | 20200000 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | P | 272 | N | 1 | 20200321 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | R | 273 | G | 6 (geo) | 20200323 |
| EPI_ISL_649924 | Spike | hCoV-19/England/204742220/2020 | R | 273 | S | 16 (geo) | 20200000 |
| EPI_ISL_677747 | Spike | hCoV-19/Hungary/US-32401w/2020 | R | 273 | T | 5 (geo) | 20200902 |
| EPI_ISL_572105 | Spike | hCoV-19/USA/MN-QDX-1316/2020 | R | 273 | K | 6 (geo) | 20200313 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | R | 273 | L | 1 | 20200321 |
| EPI_ISL_450427 | Spike | hCoV-19/Anhui/MAS635/2020 | R | 273 | M | 1 | 20200218 |
| EPI_ISL_436416 | Spike | hCoV-19/India/TN-NCDC-2514/2020 | T | 274 | I | 13 (geo) | 20200331 |
| EPI_ISL_423128 | Spike | hCoV-19/England/20134024504/2020 | T | 274 | L | 4 (geo) | 20200323 |
| EPI_ISL_525518 | Spike | hCoV-19/Iraq/BB-UOB-S2B/2020 | T | 274 | S | 4 (geo) | 20200600 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | T | 274 | N | 2 (geo) | 20200000 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | T | 274 | V | 1 | 20200321 |
| EPI_ISL_543730 | Spike | hCoV-19/USA/TX-HMH-4580/2020 | T | 274 | A | 1 | 20200620 |
| EPI_ISL_515247 | Spike | hCoV-19/Ghana/KSH61/2020 | F | 275 | L | 4 (geo) | 20200328 |
| EPI_ISL_677747 | Spike | hCoV-19/Hungary/US-32401w/2020 | F | 275 | V | 1 | 20200902 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | F | 275 | I | 1 | 20200000 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | F | 275 | R | 3 (geo) | 20200321 |
| EPI_ISL_450427 | Spike | hCoV-19/Anhui/MAS635/2020 | F | 275 | Y | 1 | 20200218 |
| EPI_ISL_450427 | Spike | hCoV-19/Anhui/MAS635/2020 | L | 276 | I | 2 (geo) | 20200218 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | L | 276 | Q | 2 (geo) | 20200000 |
| EPI_ISL_677747 | Spike | hCoV-19/Hungary/US-32401w/2020 | L | 276 | F | 1 | 20200902 |
| EPI_ISL_466180 | Spike | hCoV-19/England/20149027404/2020 | L | 276 | P | 2 (geo) | 20200403 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | L | 276 | D | 1 | 20200321 |
| EPI_ISL_788421 | Spike | hCoV-19/USA/TX-HMH-MCoV-13273/2020 | L | 277 | S | 1 | 20200824 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | L | 277 | I | 1 | 20200000 |
| EPI_ISL_768617 | Spike | hCoV-19/Thailand/Samut Sakorn_710/2020 | K | 278 | T | 1 | 20201220 |
| EPI_ISL_427034 | Spike | hCoV-19/Australia/VIC757/2020 | K | 278 | L | 1 | 20200331 |
| EPI_ISL_740373 | Spike | hCoV-19/Luxembourg/LNS3775027/2020 | K | 278 | R | 3 (geo) | 20201026 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | K | 278 | P | 1 | 20200321 |
| EPI_ISL_698454 | Spike | hCoV-19/United Arab Emirates/0274/2020 | K | 278 | E | 2 (geo) | 20200518 |
| EPI_ISL_622219 | Spike | hCoV-19/Denmark/DCGC-1824/2020 | K | 278 | I | 1 | 20200330 |
| EPI_ISL_463002 | Spike | hCoV-19/Tunisia/COV0880/2020 | Y | 279 | N | 3 (geo) | 20200328 |
| EPI_ISL_427034 | Spike | hCoV-19/Australia/VIC757/2020 | Y | 279 | L | 1 | 20200331 |
| EPI_ISL_417327 | Spike | hCoV-19/USA/CA-CDPH-UC23/2020 | Y | 279 | S | 1 | 20200309 |
| EPI_ISL_542527 | Spike | hCoV-19/USA/TX-HMH-1092/2020 | Y | 279 | F | 3 (geo) | 20200426 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | Y | 279 | K | 1 | 20200000 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | Y | 279 | Q | 1 | 20200321 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | N | 280 | I | 3 (geo) | 20200512 |
| EPI_ISL_427034 | Spike | hCoV-19/Australia/VIC757/2020 | N | 280 | V | 1 | 20200331 |
| EPI_ISL_864565 | Spike | hCoV-19/Germany/ST-MD134/2020 | N | 280 | D | 1 | 20200000 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | N | 280 | G | 1 | 20200321 |
| EPI_ISL_839050 | Spike | hCoV-19/England/LOND-12F3584/2021 | N | 280 | S | 1 | 20210102 |
| EPI_ISL_684776 | Spike | hCoV-19/Japan/PG-1166/2020 | E | 281 | Q | 46 (geo) | 20200400 |
| EPI_ISL_420083 | Spike | hCoV-19/Taiwan/128/2020 | E | 281 | V | 79 (geo) | 20200318 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | E | 281 | M | 1 | 20200512 |
| EPI_ISL_813271 | Spike | hCoV-19/England/CAMB-A99697/2020 | E | 281 | K | 5 (geo) | 20200000 |
| EPI_ISL_625479 | Spike | hCoV-19/USA/CA-CZB-11646/2020 | E | 281 | A | 1 | 20200923 |
| EPI_ISL_603279 | Spike | hCoV-19/Switzerland/ZH-ETHZ-300246/2020 | E | 281 | G | 4 (geo) | 20200930 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | E | 281 | F | 1 | 20200321 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | N | 282 | K | 6 (geo) | 20200512 |
| EPI_ISL_427034 | Spike | hCoV-19/Australia/VIC757/2020 | N | 282 | M | 1 | 20200331 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | N | 282 | S | 9 (geo) | 20200321 |
| EPI_ISL_857260 | Spike | hCoV-19/USA/NY-NYCPHL-001996/2020 | N | 282 | H | 1 | 20201229 |
| EPI_ISL_738123 | Spike | hCoV-19/Italy/CAM-IZSM-115298/2020 | N | 282 | T | 1 | 20200823 |
| EPI_ISL_570812 | Spike | hCoV-19/USA/WA-UW-19249/2020 | N | 282 | P | 1 | 20200801 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | G | 283 | M | 1 | 20200512 |
| EPI_ISL_427034 | Spike | hCoV-19/Australia/VIC757/2020 | G | 283 | E | 1 | 20200331 |
| EPI_ISL_788623 | Spike | hCoV-19/USA/TX-HMH-MCoV-13494/2020 | G | 283 | V | 1 | 20200822 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | G | 283 | A | 1 | 20200321 |
| EPI_ISL_570812 | Spike | hCoV-19/USA/WA-UW-19249/2020 | G | 283 | S | 1 | 20200801 |
| EPI_ISL_792191 | Spike | hCoV-19/Argentina/PAIS-A0102/2020 | T | 284 | I | 14 (geo) | 20200509 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | T | 284 | E | 1 | 20200512 |
| EPI_ISL_427034 | Spike | hCoV-19/Australia/VIC757/2020 | T | 284 | P | 1 | 20200331 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | T | 284 | K | 1 | 20200000 |
| EPI_ISL_775254 | Spike | hCoV-19/Morocco/FMP-55/2020 | T | 284 | A | 1 | 20201200 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | T | 284 | L | 1 | 20200321 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | I | 285 | P | 1 | 20200512 |
| EPI_ISL_427034 | Spike | hCoV-19/Australia/VIC757/2020 | I | 285 | L | 1 | 20200331 |
| EPI_ISL_454421 | Spike | hCoV-19/USA/MDH-5622/2020 | I | 285 | T | 4 (geo) | 20200308 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | I | 285 | N | 1 | 20200000 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | I | 285 | E | 1 | 20200321 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | T | 286 | L | 1 | 20200512 |
| EPI_ISL_444145 | Spike | hCoV-19/England/LOND-D468B/2020 | T | 286 | I | 27 (geo) | 20200408 |
| EPI_ISL_427034 | Spike | hCoV-19/Australia/VIC757/2020 | T | 286 | Q | 1 | 20200331 |
| EPI_ISL_454429 | Spike | hCoV-19/USA/MDH-7761/2020 | T | 286 | A | 2 (geo) | 20200312 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | T | 286 | P | 1 | 20200321 |
| EPI_ISL_758606 | Spike | hCoV-19/Denmark/DCGC-22193/2020 | D | 287 | N | 6 (geo) | 20201214 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | D | 287 | H | 1 | 20200512 |
| EPI_ISL_427034 | Spike | hCoV-19/Australia/VIC757/2020 | D | 287 | M | 1 | 20200331 |
| EPI_ISL_518869 | Spike | hCoV-19/USA/MN-MDH-1475/2020 | D | 287 | G | 32 (geo) | 20200323 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | D | 287 | Y | 1 | 20200300 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | D | 287 | L | 1 | 20200321 |
| EPI_ISL_738151 | Spike | hCoV-19/USA/TX-DSHS-1812/2020 | D | 287 | V | 1 | 20200615 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | A | 288 | P | 1 | 20200327 |
| EPI_ISL_426879 | Spike | hCoV-19/Australia/VIC908/2020 | A | 288 | S | 6 (geo) | 20200323 |
| EPI_ISL_427034 | Spike | hCoV-19/Australia/VIC757/2020 | A | 288 | L | 1 | 20200331 |
| EPI_ISL_450513 | Spike | hCoV-19/Lebanon/S6_766/2020 | A | 288 | V | 10 (geo) | 20200309 |
| EPI_ISL_463003 | Spike | hCoV-19/Tunisia/COV1339/2020 | A | 288 | T | 2 (geo) | 20200330 |
| EPI_ISL_432485 | Spike | hCoV-19/England/SHEF-CA1C3/2020 | V | 289 | I | 62 (geo) | 20200324 |
| EPI_ISL_451769 | Spike | hCoV-19/Switzerland/VD-ETHZ-100820/2020 | V | 289 | L | 17 (geo) | 20200326 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | V | 289 | E | 1 | 20200300 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | V | 289 | D | 1 | 20200321 |
| EPI_ISL_672575 | Spike | hCoV-19/Iran/SA-Isf-12/2020 | D | 290 | H | 5 (geo) | 20200329 |
| EPI_ISL_464590 | Spike | hCoV-19/England/201090583/2020 | D | 290 | Y | 4 (geo) | 20200307 |
| EPI_ISL_423975 | Spike | hCoV-19/England/20129001404/2020 | D | 290 | V | 1 | 20200320 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | D | 290 | L | 1 | 20200321 |
| EPI_ISL_464201 | Spike | hCoV-19/England/20099000804/2020 | D | 290 | E | 1 | 20200228 |
| EPI_ISL_525512 | Spike | hCoV-19/Iraq/BB-UOB-S15A/2020 | C | 291 | G | 7 (geo) | 20200600 |
| EPI_ISL_427231 | Spike | hCoV-19/USA/WA-UW-3992/2020 | C | 291 | I | 2 (geo) | 20200329 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | C | 291 | P | 1 | 20200321 |
| EPI_ISL_516921 | Spike | hCoV-19/Israel/CVL6027/2020 | C | 291 | R | 1 | 20200628 |
| EPI_ISL_427231 | Spike | hCoV-19/USA/WA-UW-3992/2020 | A | 292 | S | 19 (geo) | 20200329 |
| EPI_ISL_538282 | Spike | hCoV-19/USA/TX-DSHS-0344/2020 | A | 292 | T | 4 (geo) | 20200613 |
| EPI_ISL_417920 | Spike | hCoV-19/Malaysia/190300/2020 | A | 292 | V | 1 | 20200322 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | A | 292 | I | 1 | 20200321 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | L | 293 | I | 1 | 20200402 |
| EPI_ISL_427168 | Spike | hCoV-19/USA/ID-UW-4100/2020 | L | 293 | V | 4 (geo) | 20200329 |
| EPI_ISL_417920 | Spike | hCoV-19/Malaysia/190300/2020 | L | 293 | M | 1 | 20200322 |
| EPI_ISL_539528 | Spike | hCoV-19/Spain/CM-ISCIII-202018271/2020 | L | 293 | P | 1 | 20200322 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | L | 293 | G | 1 | 20200321 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | D | 294 | R | 1 | 20200402 |
| EPI_ISL_427168 | Spike | hCoV-19/USA/ID-UW-4100/2020 | D | 294 | E | 4 (geo) | 20200329 |
| EPI_ISL_786830 | Spike | hCoV-19/USA/TX-HMH-MCoV-15346/2020 | D | 294 | N | 1 | 20201021 |
| EPI_ISL_472807 | Spike | hCoV-19/Wales/PHWC-15E363/2020 | D | 294 | K | 1 | 20200515 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | D | 294 | I | 2 (geo) | 20200321 |
| EPI_ISL_786017 | Spike | hCoV-19/USA/TX-HMH-MCoV-16333/2020 | D | 294 | A | 1 | 20201102 |
| EPI_ISL_427168 | Spike | hCoV-19/USA/ID-UW-4100/2020 | P | 295 | S | 6 (geo) | 20200329 |
| EPI_ISL_417920 | Spike | hCoV-19/Malaysia/190300/2020 | P | 295 | H | 1 | 20200322 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | P | 295 | N | 1 | 20200321 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | L | 296 | V | 1 | 20200402 |
| EPI_ISL_669738 | Spike | hCoV-19/Denmark/DCGC-10640/2020 | L | 296 | I | 6 (geo) | 20201102 |
| EPI_ISL_434634 | Spike | hCoV-19/France/OCC-19/2020 | L | 296 | H | 1 | 20200411 |
| EPI_ISL_861429 | Spike | hCoV-19/USA/WY-WPHL-21000576/2021 | L | 296 | S | 1 | 20210104 |
| EPI_ISL_417920 | Spike | hCoV-19/Malaysia/190300/2020 | L | 296 | F | 1 | 20200322 |
| EPI_ISL_475696 | Spike | hCoV-19/USA/CA-CSMC80/2020 | S | 297 | T | 1 | 20200326 |
| EPI_ISL_464397 | Spike | hCoV-19/England/201060144/2020 | S | 297 | L | 14 (geo) | 20200304 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | S | 297 | A | 1 | 20200402 |
| EPI_ISL_417920 | Spike | hCoV-19/Malaysia/190300/2020 | S | 297 | W | 1 | 20200322 |
| EPI_ISL_541686 | Spike | hCoV-19/India/MH-NIV-114444/2020 | S | 297 | Y | 1 | 20200714 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | S | 297 | I | 1 | 20200321 |
| EPI_ISL_672575 | Spike | hCoV-19/Iran/SA-Isf-12/2020 | E | 298 | Q | 14 (geo) | 20200329 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | E | 298 | H | 1 | 20200402 |
| EPI_ISL_450416 | Spike | hCoV-19/Anhui/HN011/2020 | E | 298 | K | 8 (geo) | 20200203 |
| EPI_ISL_421371 | Spike | hCoV-19/USA/NY-PV08403/2020 | E | 298 | G | 1 | 20200317 |
| EPI_ISL_541686 | Spike | hCoV-19/India/MH-NIV-114444/2020 | E | 298 | R | 1 | 20200714 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | E | 298 | T | 1 | 20200321 |
| EPI_ISL_569263 | Spike | hCoV-19/France/PAC-IHU-0039/2020 | T | 299 | I | 143 (geo) | 20200318 |
| EPI_ISL_446423 | Spike | hCoV-19/Wales/PHWC-3122E/2020 | T | 299 | A | 15 (geo) | 20200410 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | T | 299 | L | 1 | 20200402 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | T | 299 | R | 1 | 20200321 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | T | 299 | C | 1 | 20200317 |
| EPI_ISL_812768 | Spike | hCoV-19/Turkey/HSGM-1167/2020 | - | 299 | K | 1 | 20201229 |
| EPI_ISL_812768 | Spike | hCoV-19/Turkey/HSGM-1167/2020 | - | 299 | C | 1 | 20201229 |
| EPI_ISL_812768 | Spike | hCoV-19/Turkey/HSGM-1167/2020 | - | 299 | T | 1 | 20201229 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | K | 300 | V | 1 | 20200402 |
| EPI_ISL_827592 | Spike | hCoV-19/Iceland/3896/2020 | K | 300 | R | 3 (geo) | 20201005 |
| EPI_ISL_450416 | Spike | hCoV-19/Anhui/HN011/2020 | K | 300 | N | 2 (geo) | 20200203 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | K | 300 | F | 1 | 20200321 |
| EPI_ISL_454429 | Spike | hCoV-19/USA/MDH-7761/2020 | K | 300 | Q | 1 | 20200312 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | K | 300 | T | 1 | 20200317 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | C | 301 | M | 1 | 20200402 |
| EPI_ISL_596381 | Spike | hCoV-19/Iran/K1r-74/2020 | C | 301 | S | 5 (geo) | 20200400 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | C | 301 | Q | 1 | 20200321 |
| EPI_ISL_464427 | Spike | hCoV-19/England/201080017/2020 | C | 301 | F | 2 (geo) | 20200305 |
| EPI_ISL_693536 | Spike | hCoV-19/Portugal/PT1737/2020 | C | 301 | Y | 1 | 20200825 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | C | 301 | L | 1 | 20200317 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | T | 302 | V | 1 | 20200402 |
| EPI_ISL_451196 | Spike | hCoV-19/Uganda/UG014/2020 | T | 302 | A | 3 (geo) | 20200325 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | T | 302 | N | 1 | 20201124 |
| EPI_ISL_450416 | Spike | hCoV-19/Anhui/HN011/2020 | T | 302 | L | 1 | 20200203 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | T | 302 | K | 1 | 20200317 |
| EPI_ISL_766219 | Spike | hCoV-19/England/205261952/2020 | L | 303 | F | 23 (geo) | 20200000 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | L | 303 | M | 1 | 20201124 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | L | 303 | S | 1 | 20200317 |
| EPI_ISL_457217 | Spike | hCoV-19/England/EXET-1362EC/2020 | K | 304 | R | 3 (geo) | 20200412 |
| EPI_ISL_514272 | Spike | hCoV-19/Israel/CVL-n25872/2020 | K | 304 | N | 1 | 20200720 |
| EPI_ISL_825014 | Spike | hCoV-19/USA/IL-NM-5336/2020 | K | 304 | Q | 2 (geo) | 20201229 |
| EPI_ISL_691683 | Spike | hCoV-19/Spain/CM-ISCIII-2010317/2020 | K | 304 | E | 1 | 20200511 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | K | 304 | A | 1 | 20201124 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | K | 304 | L | 1 | 20200321 |
| EPI_ISL_454429 | Spike | hCoV-19/USA/MDH-7761/2020 | K | 304 | P | 1 | 20200312 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | K | 304 | F | 1 | 20200317 |
| EPI_ISL_423580 | Spike | hCoV-19/England/20146017604/2020 | S | 305 | V | 2 (geo) | 20200402 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | S | 305 | T | 4 (geo) | 20200317 |
| EPI_ISL_707990 | Spike | hCoV-19/Germany/SL-SU-10451186/2020 | S | 305 | P | 1 | 20201015 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | S | 305 | A | 2 (geo) | 20200321 |
| EPI_ISL_859969 | Spike | hCoV-19/United Arab Emirates/4189/2020 | S | 305 | F | 2 (geo) | 20200502 |
| EPI_ISL_541722 | Spike | hCoV-19/India/MH-NIV-19080/2020 | S | 305 | I | 1 | 20200501 |
| EPI_ISL_483718 | Spike | hCoV-19/Israel/n14264/2020 | S | 305 | N | 1 | 20200312 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | F | 306 | L | 66 (geo) | 20200321 |
| EPI_ISL_526917 | Spike | hCoV-19/USA/VA-DCLS-1032/2020 | F | 306 | I | 1 | 20200603 |
| EPI_ISL_483718 | Spike | hCoV-19/Israel/n14264/2020 | F | 306 | P | 2 (geo) | 20200312 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | F | 306 | V | 1 | 20200317 |
| EPI_ISL_451376 | Spike | hCoV-19/Sichuan/SC-WCH1-005/2020 | T | 307 | I | 254 (geo) | 20200128 |
| EPI_ISL_483718 | Spike | hCoV-19/Israel/n14264/2020 | T | 307 | S | 19 (geo) | 20200312 |
| EPI_ISL_490210 | Spike | hCoV-19/USA/CA-QRTP-Donor1/2020 | T | 307 | A | 5 (geo) | 20200401 |
| EPI_ISL_478985 | Spike | hCoV-19/England/OXON-B0FE4/2020 | T | 307 | N | 11 (geo) | 20200000 |
| EPI_ISL_744971 | Spike | hCoV-19/Luxembourg/LNS9705196/2020 | T | 307 | L | 1 | 20201019 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | T | 307 | P | 1 | 20200422 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | T | 307 | H | 1 | 20200321 |
| EPI_ISL_548744 | Spike | hCoV-19/Canada/ON-PHL-20-00069/2020 | V | 308 | L | 298 (geo) | 20200000 |
| EPI_ISL_746485 | Spike | hCoV-19/Chile/RM-131478/2020 | V | 308 | A | 1 | 20200722 |
| EPI_ISL_541722 | Spike | hCoV-19/India/MH-NIV-19080/2020 | V | 308 | I | 6 (geo) | 20200501 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | V | 308 | R | 1 | 20200321 |
| EPI_ISL_479659 | Spike | hCoV-19/India/MH-NIV-39037/2020 | V | 308 | E | 1 | 20200522 |
| EPI_ISL_457740 | Spike | hCoV-19/Estonia/ChVir4313/2020 | E | 309 | Q | 133 (geo) | 20200300 |
| EPI_ISL_480692 | Spike | hCoV-19/Australia/NT44/2020 | E | 309 | K | 16 (geo) | 20200000 |
| EPI_ISL_456281 | Spike | hCoV-19/New Zealand/20VR1843/2020 | E | 309 | A | 4 (geo) | 20200328 |
| EPI_ISL_454429 | Spike | hCoV-19/USA/MDH-7761/2020 | E | 309 | D | 3 (geo) | 20200312 |
| EPI_ISL_803678 | Spike | hCoV-19/USA/WI-WSLH-201482/2020 | E | 309 | R | 3 (geo) | 20201009 |
| EPI_ISL_831255 | Spike | hCoV-19/Spain/MD-IBV-99013379/2020 | E | 309 | G | 3 (geo) | 20201209 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | E | 309 | S | 1 | 20200321 |
| EPI_ISL_628432 | Spike | hCoV-19/England/QEUH-A49818/2020 | E | 309 | V | 1 | 20201003 |
| EPI_ISL_766256 | Spike | hCoV-19/England/205260364/2020 | K | 310 | R | 22 (geo) | 20200000 |
| EPI_ISL_419251 | Spike | hCoV-19/Hong Kong/HKPU90-1602/2020 | K | 310 | E | 2 (geo) | 20200226 |
| EPI_ISL_744971 | Spike | hCoV-19/Luxembourg/LNS9705196/2020 | K | 310 | L | 1 | 20201019 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | K | 310 | Y | 1 | 20200321 |
| EPI_ISL_476025 | Spike | hCoV-19/Morocco/CA24/2020 | G | 311 | E | 6 (geo) | 20200502 |
| EPI_ISL_744971 | Spike | hCoV-19/Luxembourg/LNS9705196/2020 | G | 311 | F | 1 | 20201019 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | G | 311 | L | 1 | 20200321 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | G | 311 | K | 2 (geo) | 20200315 |
| EPI_ISL_556863 | Spike | hCoV-19/England/CAMC-9423B5/2020 | I | 312 | L | 5 (geo) | 20200716 |
| EPI_ISL_539549 | Spike | hCoV-19/Spain/CT-ISCIII-202044/2020 | I | 312 | V | 7 (geo) | 20200303 |
| EPI_ISL_478072 | Spike | hCoV-19/Scotland/CVR3480/2020 | I | 312 | S | 6 (geo) | 20200511 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | I | 312 | T | 1 | 20200321 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | I | 312 | E | 1 | 20200315 |
| EPI_ISL_641737 | Spike | hCoV-19/England/QEUH-B141DE/2020 | I | 312 | M | 1 | 20201103 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | I | 312 | G | 1 | 20200317 |
| EPI_ISL_786701 | Spike | hCoV-19/USA/TX-HMH-MCoV-15217/2020 | I | 312 | F | 1 | 20201019 |
| EPI_ISL_643255 | Spike | hCoV-19/England/QEUH-A8B917/2020 | Y | 313 | H | 2 (geo) | 20201016 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | Y | 313 | I | 6 (geo) | 20200317 |
| EPI_ISL_744971 | Spike | hCoV-19/Luxembourg/LNS9705196/2020 | Y | 313 | K | 1 | 20201019 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | Y | 313 | P | 1 | 20200321 |
| EPI_ISL_465848 | Spike | hCoV-19/England/201390491/2020 | Y | 313 | F | 1 | 20200328 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | Y | 313 | S | 1 | 20200315 |
| EPI_ISL_454429 | Spike | hCoV-19/USA/MDH-7761/2020 | Q | 314 | P | 2 (geo) | 20200312 |
| EPI_ISL_632382 | Spike | hCoV-19/Netherlands/LI-EMC-92/2020 | Q | 314 | K | 74 (geo) | 20200000 |
| EPI_ISL_485937 | Spike | hCoV-19/USA/CT-UW-3119/2020 | Q | 314 | L | 5 (geo) | 20200326 |
| EPI_ISL_509955 | Spike | hCoV-19/USA/WI-UW-956/2020 | Q | 314 | H | 3 (geo) | 20200518 |
| EPI_ISL_463003 | Spike | hCoV-19/Tunisia/COV1339/2020 | Q | 314 | R | 2 (geo) | 20200330 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | Q | 314 | G | 1 | 20200321 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | Q | 314 | I | 1 | 20200315 |
| EPI_ISL_565918 | Spike | hCoV-19/Spain/AN-IBV-98002031/2020 | Q | 314 | Y | 1 | 20200317 |
| EPI_ISL_463629 | Spike | hCoV-19/USA/WA-S1139/2020 | T | 315 | I | 6 (geo) | 20200504 |
| EPI_ISL_479425 | Spike | hCoV-19/Wales/PHWC-165123/2020 | T | 315 | L | 6 (geo) | 20200420 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | T | 315 | D | 1 | 20200321 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | T | 315 | K | 1 | 20200315 |
| EPI_ISL_755563 | Spike | hCoV-19/USA/ME-HETL-J0472/2020 | S | 316 | Y | 2 (geo) | 20201211 |
| EPI_ISL_788050 | Spike | hCoV-19/USA/TX-HMH-MCoV-12898/2020 | S | 316 | P | 1 | 20200818 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | S | 316 | L | 7 (geo) | 20200315 |
| EPI_ISL_755365 | Spike | hCoV-19/USA/ME-HETL-J0187/2020 | S | 316 | K | 1 | 20200916 |
| EPI_ISL_745142 | Spike | hCoV-19/South Africa/Tygerberg-385/2020 | S | 316 | F | 2 (geo) | 20201201 |
| EPI_ISL_795057 | Spike | hCoV-19/Denmark/DCGC-24329/2020 | S | 316 | A | 1 | 20201228 |
| EPI_ISL_478072 | Spike | hCoV-19/Scotland/CVR3480/2020 | N | 317 | T | 7 (geo) | 20200511 |
| EPI_ISL_479425 | Spike | hCoV-19/Wales/PHWC-165123/2020 | N | 317 | V | 1 | 20200420 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | N | 317 | S | 3 (geo) | 20200321 |
| EPI_ISL_454429 | Spike | hCoV-19/USA/MDH-7761/2020 | N | 317 | H | 1 | 20200312 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | N | 317 | L | 1 | 20200315 |
| EPI_ISL_451343 | Spike | hCoV-19/Sichuan/SC-NJ-094/2020 | N | 317 | D | 1 | 20200130 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | N | 317 | F | 1 | 20200501 |
| EPI_ISL_707950 | Spike | hCoV-19/Germany/SL-SU-10427535/2020 | F | 318 | L | 10 (geo) | 20200316 |
| EPI_ISL_479425 | Spike | hCoV-19/Wales/PHWC-165123/2020 | F | 318 | I | 2 (geo) | 20200420 |
| EPI_ISL_480690 | Spike | hCoV-19/Australia/VIC1985/2020 | F | 318 | Y | 1 | 20200612 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | F | 318 | S | 4 (geo) | 20200321 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | F | 318 | T | 1 | 20200315 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | R | 319 | L | 3 (geo) | 20200315 |
| EPI_ISL_478366 | Spike | hCoV-19/England/LCST-24D7132/2020 | R | 319 | E | 3 (geo) | 20200615 |
| EPI_ISL_539530 | Spike | hCoV-19/Spain/CM-ISCIII-202018318/2020 | R | 319 | S | 2 (geo) | 20200322 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | R | 319 | G | 1 | 20200321 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | R | 319 | V | 1 | 20200327 |
| EPI_ISL_794822 | Spike | hCoV-19/Greece/CP0800977/2020 | R | 319 | Q | 1 | 20201230 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | R | 319 | T | 1 | 20200501 |
| EPI_ISL_431972 | Spike | hCoV-19/Wales/PHWC-27276/2020 | R | 319 | K | 1 | 20200331 |
| EPI_ISL_663640 | Spike | hCoV-19/Australia/VIC16916/2020 | V | 320 | I | 57 (geo) | 20200000 |
| EPI_ISL_539085 | Spike | hCoV-19/England/LEED-2A885B/2020 | V | 320 | A | 4 (geo) | 20200324 |
| EPI_ISL_581738 | Spike | hCoV-19/Switzerland/BS-42205161/2020 | V | 320 | F | 10 (geo) | 20200324 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | V | 320 | L | 2 (geo) | 20200327 |
| EPI_ISL_478366 | Spike | hCoV-19/England/LCST-24D7132/2020 | V | 320 | S | 3 (geo) | 20200615 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | V | 320 | T | 2 (geo) | 20200501 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | V | 320 | W | 1 | 20200321 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | V | 320 | E | 1 | 20200315 |
| EPI_ISL_431972 | Spike | hCoV-19/Wales/PHWC-27276/2020 | V | 320 | G | 2 (geo) | 20200331 |
| EPI_ISL_417516 | Spike | hCoV-19/USA/WI-UW-13/2020 | Q | 321 | L | 16 (geo) | 20200315 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | Q | 321 | N | 5 (geo) | 20200327 |
| EPI_ISL_454429 | Spike | hCoV-19/USA/MDH-7761/2020 | Q | 321 | P | 2 (geo) | 20200312 |
| EPI_ISL_437257 | Spike | hCoV-19/Germany/BY-MVP-0058/2020 | Q | 321 | E | 2 (geo) | 20200320 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | Q | 321 | T | 1 | 20200321 |
| EPI_ISL_441979 | Spike | hCoV-19/England/SHEF-C584B/2020 | Q | 321 | R | 2 (geo) | 20200411 |
| EPI_ISL_489358 | Spike | hCoV-19/Northern Ireland/NIRE-103206/2020 | Q | 321 | K | 2 (geo) | 20200420 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | Q | 321 | S | 2 (geo) | 20200315 |
| EPI_ISL_794822 | Spike | hCoV-19/Greece/CP0800977/2020 | Q | 321 | G | 1 | 20201230 |
| EPI_ISL_431972 | Spike | hCoV-19/Wales/PHWC-27276/2020 | Q | 321 | I | 1 | 20200331 |
| EPI_ISL_685126 | Spike | hCoV-19/Japan/PG-1519/2020 | P | 322 | S | 14 (geo) | 20200400 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | P | 322 | Q | 5 (geo) | 20200327 |
| EPI_ISL_443045 | Spike | hCoV-19/England/CAMB-80949/2020 | P | 322 | A | 6 (geo) | 20200410 |
| EPI_ISL_707958 | Spike | hCoV-19/Germany/SL-SU-10429377/2020 | P | 322 | L | 4 (geo) | 20200325 |
| EPI_ISL_475626 | Spike | hCoV-19/USA/CA-CSMC17/2020 | P | 322 | K | 1 | 20200328 |
| EPI_ISL_480690 | Spike | hCoV-19/Australia/VIC1985/2020 | P | 322 | G | 1 | 20200612 |
| EPI_ISL_707957 | Spike | hCoV-19/Germany/SL-SU-10429188/2020 | P | 322 | T | 2 (geo) | 20200324 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | P | 322 | N | 1 | 20200315 |
| EPI_ISL_684860 | Spike | hCoV-19/Japan/PG-1250/2020 | T | 323 | I | 214 (geo) | 20200000 |
| EPI_ISL_631741 | Spike | hCoV-19/USA/NY-NYCPHL-000208/2020 | T | 323 | A | 4 (geo) | 20200419 |
| EPI_ISL_478366 | Spike | hCoV-19/England/LCST-24D7132/2020 | T | 323 | R | 6 (geo) | 20200615 |
| EPI_ISL_637083 | Spike | hCoV-19/Beijing/SX011F/2020 | T | 323 | K | 2 (geo) | 20200200 |
| EPI_ISL_813785 | Spike | hCoV-19/England/LIVE-DCFF6D/2020 | T | 323 | L | 2 (geo) | 20201225 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | T | 323 | Q | 5 (geo) | 20200315 |
| EPI_ISL_786337 | Spike | hCoV-19/USA/TX-HMH-MCoV-14853/2020 | E | 324 | V | 21 (geo) | 20201013 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | E | 324 | K | 8 (geo) | 20200327 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | E | 324 | Q | 6 (geo) | 20200315 |
| EPI_ISL_543714 | Spike | hCoV-19/USA/TX-HMH-4554/2020 | E | 324 | L | 2 (geo) | 20200620 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | E | 324 | N | 4 (geo) | 20200327 |
| EPI_ISL_570077 | Spike | hCoV-19/USA/WA-UW-5776/2020 | E | 324 | D | 3 (geo) | 20200407 |
| EPI_ISL_478366 | Spike | hCoV-19/England/LCST-24D7132/2020 | E | 324 | I | 1 | 20200615 |
| EPI_ISL_454429 | Spike | hCoV-19/USA/MDH-7761/2020 | E | 324 | A | 3 (geo) | 20200312 |
| EPI_ISL_707977 | Spike | hCoV-19/Germany/SL-SU-10450567/2020 | E | 324 | G | 1 | 20201013 |
| EPI_ISL_589717 | Spike | hCoV-19/England/MILK-9F1968/2020 | S | 325 | A | 2 (geo) | 20200925 |
| EPI_ISL_777268 | Spike | hCoV-19/England/QEUH-C93A08/2020 | S | 325 | Y | 2 (geo) | 20201216 |
| EPI_ISL_813785 | Spike | hCoV-19/England/LIVE-DCFF6D/2020 | S | 325 | V | 1 | 20201225 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | S | 325 | L | 5 (geo) | 20200327 |
| EPI_ISL_570077 | Spike | hCoV-19/USA/WA-UW-5776/2020 | S | 325 | K | 2 (geo) | 20200407 |
| EPI_ISL_488323 | Spike | hCoV-19/England/BRIS-12ED9B/2020 | S | 325 | F | 7 (geo) | 20200421 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | S | 325 | N | 2 (geo) | 20200315 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | I | 326 | L | 6 (geo) | 20200315 |
| EPI_ISL_485379 | Spike | hCoV-19/USA/LA-GBCL-26791769/2020 | I | 326 | V | 2 (geo) | 20200404 |
| EPI_ISL_591188 | Spike | hCoV-19/Canada/ON-S1419/2020 | V | 327 | I | 7 (geo) | 20200823 |
| EPI_ISL_454429 | Spike | hCoV-19/USA/MDH-7761/2020 | V | 327 | F | 2 (geo) | 20200312 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | V | 327 | L | 8 (geo) | 20200315 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | R | 328 | D | 4 (geo) | 20200327 |
| EPI_ISL_812852 | Spike | hCoV-19/Egypt/CCHE57357-P-10/2020 | R | 328 | G | 2 (geo) | 20200803 |
| EPI_ISL_790516 | Spike | hCoV-19/USA/TX-HMH-MCoV-12773/2020 | R | 328 | I | 2 (geo) | 20200819 |
| EPI_ISL_596383 | Spike | hCoV-19/Iran/K1r-75/2020 | R | 328 | T | 1 | 20200400 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | R | 328 | Y | 1 | 20200921 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | R | 328 | L | 2 (geo) | 20200315 |
| EPI_ISL_802042 | Spike | hCoV-19/USA/NY-MSHSPSP-PV14796/2020 | F | 329 | L | 7 (geo) | 20200430 |
| EPI_ISL_787655 | Spike | hCoV-19/USA/TX-HMH-MCoV-14370/2020 | F | 329 | I | 1 | 20201005 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | F | 329 | D | 2 (geo) | 20200315 |
| EPI_ISL_724836 | Spike | hCoV-19/England/NORT-1B62D16/2020 | P | 330 | S | 215 (geo) | 20200000 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | P | 330 | L | 15 (geo) | 20200327 |
| EPI_ISL_521614 | Spike | hCoV-19/Australia/VIC2780/2020 | P | 330 | A | 5 (geo) | 20200706 |
| EPI_ISL_789801 | Spike | hCoV-19/USA/TX-HMH-MCoV-12682/2020 | P | 330 | T | 1 | 20200830 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | P | 330 | K | 1 | 20200921 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | P | 330 | F | 2 (geo) | 20200315 |
| EPI_ISL_837253 | Spike | hCoV-19/Italy/CAM-TIGEM-1035/2020 | N | 331 | T | 5 (geo) | 20201221 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | N | 331 | I | 5 (geo) | 20200327 |
| EPI_ISL_454429 | Spike | hCoV-19/USA/MDH-7761/2020 | N | 331 | S | 2 (geo) | 20200312 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | N | 331 | L | 2 (geo) | 20200315 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | I | 332 | L | 4 (geo) | 20200327 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | I | 332 | Y | 1 | 20200921 |
| EPI_ISL_466368 | Spike | hCoV-19/England/201580301/2020 | T | 333 | I | 5 (geo) | 20200410 |
| EPI_ISL_865894 | Spike | hCoV-19/England/LOND-12F5889/2020 | T | 333 | K | 2 (geo) | 20200713 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | T | 333 | Q | 4 (geo) | 20200327 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | T | 333 | S | 1 | 20200921 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | T | 333 | L | 2 (geo) | 20200315 |
| EPI_ISL_555820 | Spike | hCoV-19/England/ALDP-94FF1E/2020 | N | 334 | K | 6 (geo) | 20200616 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | N | 334 | T | 4 (geo) | 20200327 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | N | 334 | Q | 2 (geo) | 20200315 |
| EPI_ISL_492755 | Spike | hCoV-19/England/LOND-D861E/2020 | L | 335 | F | 17 (geo) | 20200419 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | L | 335 | C | 4 (geo) | 20200327 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | L | 335 | H | 1 | 20200921 |
| EPI_ISL_818522 | Spike | hCoV-19/Denmark/DCGC-25468/2021 | L | 335 | S | 1 | 20210104 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | L | 335 | T | 2 (geo) | 20200315 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | C | 336 | A | 4 (geo) | 20200327 |
| EPI_ISL_476024 | Spike | hCoV-19/Morocco/moh100/2020 | C | 336 | R | 1 | 20200505 |
| EPI_ISL_784723 | Spike | hCoV-19/USA/TX-HMH-MCoV-18375/2020 | C | 336 | S | 1 | 20201118 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | C | 336 | T | 1 | 20200921 |
| EPI_ISL_660946 | Spike | hCoV-19/USA/WI-GMF-26127/2020 | P | 337 | H | 1 | 20201016 |
| EPI_ISL_507007 | Spike | hCoV-19/Iran/IRVSH-01/2020 | P | 337 | R | 1 | 20200501 |
| EPI_ISL_450530 | Spike | hCoV-19/Poland/1111628/2020 | P | 337 | S | 7 (geo) | 20200401 |
| EPI_ISL_684892 | Spike | hCoV-19/Japan/PG-1283/2020 | P | 337 | T | 4 (geo) | 20200300 |
| EPI_ISL_426742 | Spike | hCoV-19/Australia/VIC446/2020 | P | 337 | L | 7 (geo) | 20200327 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | P | 337 | A | 1 | 20200315 |
| EPI_ISL_425770 | Spike | hCoV-19/Scotland/CVR42/2020 | F | 338 | L | 75 (geo) | 20200313 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | F | 338 | I | 1 | 20200921 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | G | 339 | F | 1 | 20200327 |
| EPI_ISL_686094 | Spike | hCoV-19/Japan/PG-2489/2020 | G | 339 | S | 13 (geo) | 20200400 |
| EPI_ISL_420138 | Spike | hCoV-19/Norway/1781/2020 | G | 339 | D | 40 (geo) | 20200305 |
| EPI_ISL_479425 | Spike | hCoV-19/Wales/PHWC-165123/2020 | G | 339 | V | 2 (geo) | 20200420 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | G | 339 | N | 1 | 20200921 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | G | 339 | L | 1 | 20200315 |
| EPI_ISL_826103 | Spike | hCoV-19/Canada/Qc-L00261028/2020 | E | 340 | D | 1 | 20200520 |
| EPI_ISL_792592 | Spike | hCoV-19/Brazil/PB-16605/2020 | E | 340 | A | 10 (geo) | 20200411 |
| EPI_ISL_536374 | Spike | hCoV-19/Canada/QC-LSPQ-L00243735/2020 | E | 340 | K | 7 (geo) | 20200331 |
| EPI_ISL_552615 | Spike | hCoV-19/England/MILK-97543E/2020 | E | 340 | G | 3 (geo) | 20200821 |
| EPI_ISL_678624 | Spike | hCoV-19/South Africa/KRISP-K005336/2020 | E | 340 | Q | 1 | 20201114 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | E | 340 | L | 1 | 20200921 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | E | 340 | V | 1 | 20200315 |
| EPI_ISL_454450 | Spike | hCoV-19/Sweden/20-08073/2020 | V | 341 | I | 42 (geo) | 20200303 |
| EPI_ISL_450557 | Spike | hCoV-19/USA/UT-03704/2020 | V | 341 | F | 3 (geo) | 20200408 |
| EPI_ISL_756304 | Spike | hCoV-19/USA/WA-UW-47072/2020 | V | 341 | A | 1 | 20201214 |
| EPI_ISL_565912 | Spike | hCoV-19/Spain/AN-IBV-98001986/2020 | V | 341 | K | 1 | 20200315 |
| EPI_ISL_496808 | Spike | hCoV-19/Panama/335166/2020 | F | 342 | L | 1 | 20200401 |
| EPI_ISL_475586 | Spike | hCoV-19/USA/CA-CSMC110/2020 | F | 342 | C | 2 (geo) | 20200322 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | F | 342 | R | 1 | 20200921 |
| EPI_ISL_528931 | Spike | hCoV-19/England/20204116404/2020 | N | 343 | S | 1 | 20200513 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | N | 343 | D | 1 | 20200921 |
| EPI_ISL_766509 | Spike | hCoV-19/England/205260245/2020 | A | 344 | S | 111 (geo) | 20200000 |
| EPI_ISL_570495 | Spike | hCoV-19/USA/WA-UW-12158/2020 | A | 344 | V | 5 (geo) | 20200626 |
| EPI_ISL_463308 | Spike | hCoV-19/Hong Kong/VM20003429/2020 | A | 344 | T | 9 (geo) | 20200313 |
| EPI_ISL_516908 | Spike | hCoV-19/Israel/CVL1328/2020 | A | 344 | P | 1 | 20200606 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | A | 344 | R | 1 | 20201023 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | A | 344 | L | 1 | 20200921 |
| EPI_ISL_536525 | Spike | hCoV-19/Peru/JUN-INS-127/2020 | T | 345 | I | 2 (geo) | 20200401 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | T | 345 | P | 1 | 20200921 |
| EPI_ISL_463539 | Spike | hCoV-19/USA/WA-S1049/2020 | T | 345 | S | 1 | 20200503 |
| EPI_ISL_496747 | Spike | hCoV-19/Panama/333567/2020 | R | 346 | K | 63 (geo) | 20200318 |
| EPI_ISL_576400 | Spike | hCoV-19/USA/UN-UW-10902/2020 | R | 346 | S | 14 (geo) | 20200611 |
| EPI_ISL_606503 | Spike | hCoV-19/England/MILK-A7A6E7/2020 | R | 346 | I | 11 (geo) | 20201015 |
| EPI_ISL_820189 | Spike | hCoV-19/England/ALDP-C69661/2020 | R | 346 | G | 1 | 20201214 |
| EPI_ISL_738251 | Spike | hCoV-19/USA/MA-Yale-447/2020 | R | 346 | T | 6 (geo) | 20200415 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | R | 346 | Q | 1 | 20200921 |
| EPI_ISL_766048 | Spike | hCoV-19/Indonesia/NT-EIJK26/2020 | F | 347 | L | 2 (geo) | 20200414 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | F | 347 | G | 1 | 20200921 |
| EPI_ISL_479561 | Spike | hCoV-19/India/MH-NIV-65281/2020 | F | 347 | I | 1 | 20200616 |
| EPI_ISL_490052 | Spike | hCoV-19/Singapore/602/2020 | F | 347 | C | 1 | 20200514 |
| EPI_ISL_571200 | Spike | hCoV-19/USA/MI-QDX-465/2020 | A | 348 | S | 64 (geo) | 20200322 |
| EPI_ISL_583637 | Spike | hCoV-19/Austria/CeMM0674/2020 | A | 348 | V | 9 (geo) | 20200514 |
| EPI_ISL_479561 | Spike | hCoV-19/India/MH-NIV-65281/2020 | A | 348 | P | 4 (geo) | 20200616 |
| EPI_ISL_766048 | Spike | hCoV-19/Indonesia/NT-EIJK26/2020 | A | 348 | Q | 1 | 20200414 |
| EPI_ISL_418046 | Spike | hCoV-19/USA/WA-UW261/2020 | A | 348 | T | 6 (geo) | 20200316 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | A | 348 | F | 1 | 20200921 |
| EPI_ISL_591436 | Spike | hCoV-19/Japan/IC-0095/2020 | S | 349 | P | 7 (geo) | 20200700 |
| EPI_ISL_470802 | Spike | hCoV-19/Wuhan/Tongji-04-2/2020 | S | 349 | F | 3 (geo) | 20200420 |
| EPI_ISL_857634 | Spike | hCoV-19/England/CAMC-FB239C/2021 | S | 349 | A | 1 | 20210108 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | V | 350 | L | 2 (geo) | 20200321 |
| EPI_ISL_707953 | Spike | hCoV-19/Germany/SL-SU-10428084/2020 | V | 350 | A | 2 (geo) | 20200318 |
| EPI_ISL_786300 | Spike | hCoV-19/USA/TX-HMH-MCoV-14816/2020 | V | 350 | Q | 1 | 20201013 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | Y | 351 | L | 3 (geo) | 20200321 |
| EPI_ISL_781121 | Spike | hCoV-19/USA/TX-HMH-MCoV-9433/2020 | Y | 351 | F | 1 | 20200703 |
| EPI_ISL_460665 | Spike | hCoV-19/Netherlands/NA_492/2020 | A | 352 | S | 96 (geo) | 20200313 |
| EPI_ISL_775860 | Spike | hCoV-19/Germany/HH-hpi-p1523/2020 | A | 352 | V | 18 (geo) | 20200315 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | A | 352 | I | 2 (geo) | 20200321 |
| EPI_ISL_785792 | Spike | hCoV-19/USA/TX-HMH-MCoV-16108/2020 | A | 352 | D | 3 (geo) | 20201027 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | A | 352 | E | 1 | 20200921 |
| EPI_ISL_447926 | Spike | hCoV-19/England/BIRM-5E9CC/2020 | W | 353 | S | 1 | 20200427 |
| EPI_ISL_787201 | Spike | hCoV-19/USA/TX-HMH-MCoV-13909/2020 | W | 353 | C | 3 (geo) | 20200816 |
| EPI_ISL_427655 | Spike | hCoV-19/Australia/NSW34/2020 | W | 353 | R | 1 | 20200311 |
| EPI_ISL_424374 | Spike | hCoV-19/Iceland/350/2020 | W | 353 | L | 3 (geo) | 20200300 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | W | 353 | P | 1 | 20200921 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | N | 354 | H | 5 (geo) | 20200327 |
| EPI_ISL_422772 | Spike | hCoV-19/Netherlands/NA_238/2020 | N | 354 | K | 36 (geo) | 20200327 |
| EPI_ISL_775881 | Spike | hCoV-19/Germany/HH-hpi-p2081/2020 | N | 354 | S | 18 (geo) | 20200320 |
| EPI_ISL_406595 | Spike | hCoV-19/Shenzhen/SZTH-004/2020 | N | 354 | D | 46 (geo) | 20200116 |
| EPI_ISL_478196 | Spike | hCoV-19/Scotland/EDB5274/2020 | N | 354 | E | 2 (geo) | 20200519 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | N | 354 | L | 1 | 20200921 |
| EPI_ISL_420737 | Spike | hCoV-19/England/20139061804/2020 | R | 355 | S | 3 (geo) | 20200327 |
| EPI_ISL_811137 | Spike | hCoV-19/Turkey/HSGM-1169/2020 | - | 355 | K | 1 | 20201229 |
| EPI_ISL_811137 | Spike | hCoV-19/Turkey/HSGM-1169/2020 | - | 355 | R | 1 | 20201229 |
| EPI_ISL_811137 | Spike | hCoV-19/Turkey/HSGM-1169/2020 | - | 355 | I | 1 | 20201229 |
| EPI_ISL_811137 | Spike | hCoV-19/Turkey/HSGM-1169/2020 | - | 355 | S | 1 | 20201229 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | R | 355 | V | 1 | 20200921 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | R | 355 | T | 1 | 20200408 |
| EPI_ISL_775243 | Spike | hCoV-19/Italy/CAM-INTPas-16/2020 | K | 356 | R | 34 (geo) | 20200331 |
| EPI_ISL_483716 | Spike | hCoV-19/Israel/n14288/2020 | K | 356 | S | 6 (geo) | 20200405 |
| EPI_ISL_636948 | Spike | hCoV-19/Canada/ON-PHL-20-01800/2020 | K | 356 | M | 1 | 20200500 |
| EPI_ISL_691537 | Spike | hCoV-19/Japan/PG-3425/2020 | K | 356 | T | 1 | 20200400 |
| EPI_ISL_424620 | Spike | hCoV-19/Iceland/600/2020 | K | 356 | N | 2 (geo) | 20200328 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | K | 356 | D | 1 | 20200921 |
| EPI_ISL_479866 | Spike | hCoV-19/Japan/PG-0144/2020 | R | 357 | K | 77 (geo) | 20200200 |
| EPI_ISL_525534 | Spike | hCoV-19/Iraq/BB-UOB-S18B/2020 | R | 357 | I | 2 (geo) | 20200600 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | R | 357 | L | 1 | 20200921 |
| EPI_ISL_856698 | Spike | hCoV-19/Italy/CAM-COTUGNO-53805/2020 | R | 357 | S | 1 | 20201014 |
| EPI_ISL_632267 | Spike | hCoV-19/Bahrain/920319237_S17_L001/2020 | I | 358 | V | 2 (geo) | 20200726 |
| EPI_ISL_496247 | Spike | hCoV-19/USA/WA-S1821/2020 | I | 358 | T | 2 (geo) | 20200603 |
| EPI_ISL_438774 | Spike | hCoV-19/Scotland/CVR1215/2020 | I | 358 | L | 2 (geo) | 20200331 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | I | 358 | P | 1 | 20200921 |
| EPI_ISL_416328 | Spike | hCoV-19/Shanghai/SH0017/2020 | S | 359 | N | 52 (geo) | 20200201 |
| EPI_ISL_775215 | Spike | hCoV-19/Bangladesh/GRMDRC-6/2020 | S | 359 | T | 1 | 20201005 |
| EPI_ISL_794809 | Spike | hCoV-19/Italy/APU-IZSPB_482PT/2020 | S | 359 | R | 4 (geo) | 20201216 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | S | 359 | I | 1 | 20200921 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | N | 360 | T | 1 | 20200327 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | N | 360 | G | 1 | 20200921 |
| EPI_ISL_539520 | Spike | hCoV-19/Spain/CE-ISCIII-202293/2020 | C | 361 | T | 10 (geo) | 20200312 |
| EPI_ISL_826926 | Spike | hCoV-19/Iceland/3234/2020 | C | 361 | R | 1 | 20201013 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | C | 361 | S | 1 | 20200321 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | C | 361 | I | 1 | 20200921 |
| EPI_ISL_474443 | Spike | hCoV-19/Wales/PHWC-3554F/2020 | V | 362 | F | 10 (geo) | 20200423 |
| EPI_ISL_423651 | Spike | hCoV-19/England/20130064304/2020 | V | 362 | L | 2 (geo) | 20200321 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | V | 362 | N | 1 | 20200921 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | A | 363 | I | 1 | 20200921 |
| EPI_ISL_534707 | Spike | hCoV-19/USA/MD-MDH-0170/2020 | A | 363 | P | 1 | 20200603 |
| EPI_ISL_406595 | Spike | hCoV-19/Shenzhen/SZTH-004/2020 | D | 364 | Y | 1 | 20200116 |
| EPI_ISL_539923 | Spike | hCoV-19/England/QEUH-990163/2020 | D | 364 | N | 3 (geo) | 20200826 |
| EPI_ISL_539520 | Spike | hCoV-19/Spain/CE-ISCIII-202293/2020 | Y | 365 | H | 2 (geo) | 20200312 |
| EPI_ISL_570518 | Spike | hCoV-19/USA/WA-UW-12368/2020 | Y | 365 | D | 5 (geo) | 20200627 |
| EPI_ISL_570330 | Spike | hCoV-19/USA/WA-UW-10530/2020 | Y | 365 | S | 2 (geo) | 20200529 |
| EPI_ISL_603259 | Spike | hCoV-19/USA/UN-UW-5660/2020 | Y | 365 | F | 1 | 20200408 |
| EPI_ISL_539520 | Spike | hCoV-19/Spain/CE-ISCIII-202293/2020 | S | 366 | L | 2 (geo) | 20200312 |
| EPI_ISL_603259 | Spike | hCoV-19/USA/UN-UW-5660/2020 | S | 366 | P | 8 (geo) | 20200408 |
| EPI_ISL_653155 | Spike | hCoV-19/USA/FL-BPHL-2002/2020 | S | 366 | A | 1 | 20200326 |
| EPI_ISL_548750 | Spike | hCoV-19/Canada/ON-PHL-20-00075/2020 | V | 367 | F | 294 (geo) | 20200000 |
| EPI_ISL_579707 | Spike | hCoV-19/Canada/NS-NML-1327/2020 | V | 367 | L | 19 (geo) | 20200410 |
| EPI_ISL_648222 | Spike | hCoV-19/USA/TX-DSHS-1295/2020 | V | 367 | I | 31 (geo) | 20200331 |
| EPI_ISL_617471 | Spike | hCoV-19/Denmark/DCGC-2172/2020 | V | 367 | A | 4 (geo) | 20200810 |
| EPI_ISL_428485 | Spike | hCoV-19/India/KA-nimh-0834/2020 | L | 368 | P | 2 (geo) | 20200412 |
| EPI_ISL_790405 | Spike | hCoV-19/USA/TX-HMH-MCoV-12578/2020 | Y | 369 | H | 1 | 20200831 |
| EPI_ISL_512726 | Spike | hCoV-19/Australia/WA73/2020 | Y | 369 | C | 3 (geo) | 20200707 |
| EPI_ISL_439657 | Spike | hCoV-19/England/CAMB-721F7/2020 | N | 370 | S | 43 (geo) | 20200328 |
| EPI_ISL_688557 | Spike | hCoV-19/Japan/PG-7455/2020 | N | 370 | K | 14 (geo) | 20200700 |
| EPI_ISL_594965 | Spike | hCoV-19/England/MILK-9EF9D6/2020 | N | 370 | D | 2 (geo) | 20200923 |
| EPI_ISL_660987 | Spike | hCoV-19/USA/IA-GMF-27699/2020 | S | 371 | T | 8 (geo) | 20201025 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | S | 371 | P | 8 (geo) | 20200327 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | S | 371 | F | 2 (geo) | 20201113 |
| EPI_ISL_663306 | Spike | hCoV-19/Australia/VIC16844/2020 | S | 371 | A | 1 | 20200806 |
| EPI_ISL_653186 | Spike | hCoV-19/USA/FL-BPHL-2033/2020 | A | 372 | V | 10 (geo) | 20200331 |
| EPI_ISL_645115 | Spike | hCoV-19/Singapore/1388/2020 | A | 372 | P | 3 (geo) | 20201029 |
| EPI_ISL_439380 | Spike | hCoV-19/England/CAMB-770E6/2020 | A | 372 | T | 4 (geo) | 20200331 |
| EPI_ISL_422309 | Spike | hCoV-19/Wales/PHWC-26365/2020 | A | 372 | S | 3 (geo) | 20200326 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | A | 372 | K | 1 | 20201113 |
| EPI_ISL_776081 | Spike | hCoV-19/Germany/HH-hpi-p1647/2020 | S | 373 | A | 18 (geo) | 20200317 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | S | 373 | L | 56 (geo) | 20200000 |
| EPI_ISL_545554 | Spike | hCoV-19/USA/TX-HMH-2789/2020 | S | 373 | P | 22 (geo) | 20200604 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | S | 373 | C | 1 | 20201113 |
| EPI_ISL_800404 | Spike | hCoV-19/England/CAMC-D1056B/2020 | F | 374 | S | 1 | 20201226 |
| EPI_ISL_536580 | Spike | hCoV-19/USA/WI-UW-1207/2020 | F | 374 | L | 2 (geo) | 20200810 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | F | 374 | Y | 1 | 20201113 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | S | 375 | P | 4 (geo) | 20200327 |
| EPI_ISL_654162 | Spike | hCoV-19/Spain/MD-IBV-99008669/2020 | S | 375 | T | 1 | 20200930 |
| EPI_ISL_521103 | Spike | hCoV-19/Australia/VIC3434/2020 | S | 375 | F | 5 (geo) | 20200706 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | S | 375 | G | 1 | 20201113 |
| EPI_ISL_470580 | Spike | hCoV-19/Brazil/MG-0214/2020 | T | 376 | I | 45 (geo) | 20200317 |
| EPI_ISL_669731 | Spike | hCoV-19/Denmark/DCGC-10248/2020 | T | 376 | S | 2 (geo) | 20201109 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | T | 376 | N | 7 (geo) | 20201113 |
| EPI_ISL_432441 | Spike | hCoV-19/Wales/PHWC-27C5A/2020 | F | 377 | L | 7 (geo) | 20200331 |
| EPI_ISL_418745 | Spike | hCoV-19/England/20126004502/2020 | K | 378 | N | 9 (geo) | 20200318 |
| EPI_ISL_416320 | Spike | hCoV-19/Shanghai/SH0007/2020 | K | 378 | R | 4 (geo) | 20200128 |
| EPI_ISL_447679 | Spike | hCoV-19/France/IDF-10063BI/2020 | C | 379 | F | 1 | 20200300 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | Y | 380 | W | 1 | 20200327 |
| EPI_ISL_568489 | Spike | hCoV-19/Iran/K1r-62/2020 | Y | 380 | N | 1 | 20200425 |
| EPI_ISL_831236 | Spike | hCoV-19/Spain/MD-IBV-99013358/2020 | Y | 380 | F | 3 (geo) | 20201111 |
| EPI_ISL_461433 | Spike | hCoV-19/USA/WA-UW-5011/2020 | G | 381 | R | 3 (geo) | 20200407 |
| EPI_ISL_561275 | Spike | hCoV-19/Gambia/NPHL-2554/2020 | V | 382 | L | 219 (geo) | 20200000 |
| EPI_ISL_528412 | Spike | hCoV-19/England/20189123704/2020 | V | 382 | M | 1 | 20200501 |
| EPI_ISL_447714 | Spike | hCoV-19/France/IDF-10023FD/2020 | V | 382 | E | 2 (geo) | 20200300 |
| EPI_ISL_582768 | Spike | hCoV-19/Italy/SIC-IZSBM169-83/2020 | V | 382 | A | 2 (geo) | 20200600 |
| EPI_ISL_540580 | Spike | hCoV-19/England/EXET-137CED/2020 | P | 384 | L | 286 (geo) | 20200000 |
| EPI_ISL_679366 | Spike | hCoV-19/England/EXET-13BE10/2020 | P | 384 | S | 63 (geo) | 20200000 |
| EPI_ISL_636933 | Spike | hCoV-19/Canada/ON-PHL-20-01782/2020 | P | 384 | R | 13 (geo) | 20200700 |
| EPI_ISL_545990 | Spike | hCoV-19/USA/TX-HMH-643/2020 | T | 385 | I | 109 (geo) | 20200411 |
| EPI_ISL_552111 | Spike | hCoV-19/England/MILK-9936E9/2020 | T | 385 | N | 8 (geo) | 20200827 |
| EPI_ISL_825963 | Spike | hCoV-19/Canada/Qc-JEW-Q9062020/2020 | T | 385 | S | 3 (geo) | 20200506 |
| EPI_ISL_437535 | Spike | hCoV-19/USA/OR-OHSU-0008/2020 | T | 385 | A | 2 (geo) | 20200408 |
| EPI_ISL_778860 | Spike | hCoV-19/Italy/LOM-UniMI04/2020 | T | 385 | P | 1 | 20200224 |
| EPI_ISL_625194 | Spike | hCoV-19/England/ALDP-AA0AA0/2020 | N | 388 | S | 1 | 20201022 |
| EPI_ISL_447254 | Spike | hCoV-19/Taiwan/TSGH-28/2020 | N | 388 | T | 1 | 20200316 |
| EPI_ISL_778860 | Spike | hCoV-19/Italy/LOM-UniMI04/2020 | N | 388 | H | 1 | 20200224 |
| EPI_ISL_605100 | Spike | hCoV-19/Ireland/D-NVRL-20G44368/2020 | D | 389 | E | 12 (geo) | 20200329 |
| EPI_ISL_684774 | Spike | hCoV-19/Japan/PG-1164/2020 | D | 389 | N | 4 (geo) | 20200400 |
| EPI_ISL_780445 | Spike | hCoV-19/USA/TX-HMH-MCoV-8873/2020 | D | 389 | Y | 1 | 20200702 |
| EPI_ISL_743515 | Spike | hCoV-19/Wales/PHWC-4A0930/2020 | D | 389 | T | 1 | 20201210 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | L | 390 | P | 2 (geo) | 20200327 |
| EPI_ISL_692147 | Spike | hCoV-19/Japan/PG-3896/2020 | L | 390 | F | 10 (geo) | 20200700 |
| EPI_ISL_610155 | Spike | hCoV-19/Indonesia/JT-UGM-48408/2020 | L | 390 | I | 2 (geo) | 20200901 |
| EPI_ISL_516904 | Spike | hCoV-19/Israel/CVL1195/2020 | L | 390 | H | 1 | 20200629 |
| EPI_ISL_525504 | Spike | hCoV-19/Iraq/BB-UOB-S7A/2020 | C | 391 | G | 2 (geo) | 20200600 |
| EPI_ISL_508118 | Spike | hCoV-19/USA/NM-UNM-00247/2020 | F | 392 | L | 2 (geo) | 20200515 |
| EPI_ISL_437893 | Spike | hCoV-19/Greece/33_36910/2020 | T | 393 | P | 1 | 20200329 |
| EPI_ISL_788612 | Spike | hCoV-19/USA/TX-HMH-MCoV-13483/2020 | T | 393 | I | 1 | 20200822 |
| EPI_ISL_778860 | Spike | hCoV-19/Italy/LOM-UniMI04/2020 | T | 393 | S | 1 | 20200224 |
| EPI_ISL_685298 | Spike | hCoV-19/Japan/PG-1692/2020 | N | 394 | Y | 20 (geo) | 20200300 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | N | 394 | K | 4 (geo) | 20200327 |
| EPI_ISL_702274 | Spike | hCoV-19/England/CAMC-BD1F2E/2020 | N | 394 | I | 1 | 20201128 |
| EPI_ISL_864698 | Spike | hCoV-19/Switzerland/GE-32930864/2021 | N | 394 | T | 2 (geo) | 20210111 |
| EPI_ISL_788468 | Spike | hCoV-19/USA/TX-HMH-MCoV-13320/2020 | V | 395 | L | 5 (geo) | 20200824 |
| EPI_ISL_437584 | Spike | hCoV-19/USA/CA-SR0199/2020 | V | 395 | I | 8 (geo) | 20200315 |
| EPI_ISL_595231 | Spike | hCoV-19/England/NORW-F14AC/2020 | Y | 396 | H | 5 (geo) | 20200000 |
| EPI_ISL_570602 | Spike | hCoV-19/USA/WA-UW-24910/2020 | Y | 396 | F | 1 | 20200812 |
| EPI_ISL_519879 | Spike | hCoV-19/Australia/VIC5076/2020 | A | 397 | P | 1 | 20200717 |
| EPI_ISL_610155 | Spike | hCoV-19/Indonesia/JT-UGM-48408/2020 | A | 397 | T | 1 | 20200901 |
| EPI_ISL_698969 | Spike | hCoV-19/United Arab Emirates/0830/2020 | A | 397 | S | 1 | 20200519 |
| EPI_ISL_672593 | Spike | hCoV-19/Iran/SA-Isf-41/2020 | D | 398 | N | 1 | 20200610 |
| EPI_ISL_778860 | Spike | hCoV-19/Italy/LOM-UniMI04/2020 | D | 398 | A | 1 | 20200224 |
| EPI_ISL_500864 | Spike | hCoV-19/Brazil/RJ-0395/2020 | D | 398 | Y | 1 | 20200528 |
| EPI_ISL_788113 | Spike | hCoV-19/USA/TX-HMH-MCoV-12961/2020 | S | 399 | L | 2 (geo) | 20200828 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | S | 399 | A | 1 | 20200319 |
| EPI_ISL_447254 | Spike | hCoV-19/Taiwan/TSGH-28/2020 | S | 399 | P | 2 (geo) | 20200316 |
| EPI_ISL_610155 | Spike | hCoV-19/Indonesia/JT-UGM-48408/2020 | F | 400 | L | 1 | 20200901 |
| EPI_ISL_476904 | Spike | hCoV-19/USA/UN-UW-1266/2020 | V | 401 | L | 9 (geo) | 20200301 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | V | 401 | F | 2 (geo) | 20200511 |
| EPI_ISL_860414 | Spike | hCoV-19/Germany/NW-KRO-097/2020 | V | 401 | I | 1 | 20200623 |
| EPI_ISL_778860 | Spike | hCoV-19/Italy/LOM-UniMI04/2020 | V | 401 | A | 1 | 20200224 |
| EPI_ISL_436194 | Spike | hCoV-19/DRC/2169/2020 | I | 402 | V | 30 (geo) | 20200413 |
| EPI_ISL_455308 | Spike | hCoV-19/India/OR-ILC-RMRC25/2020 | I | 402 | L | 3 (geo) | 20200404 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | I | 402 | N | 1 | 20200425 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | I | 402 | T | 1 | 20200921 |
| EPI_ISL_570477 | Spike | hCoV-19/USA/WA-UW-11906/2020 | I | 402 | F | 2 (geo) | 20200624 |
| EPI_ISL_495303 | Spike | hCoV-19/USA/VA-DCLS-0630/2020 | R | 403 | K | 15 (geo) | 20200410 |
| EPI_ISL_672590 | Spike | hCoV-19/Iran/SA-Isf-38/2020 | R | 403 | T | 1 | 20200610 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | R | 403 | E | 2 (geo) | 20201023 |
| EPI_ISL_479152 | Spike | hCoV-19/England/OXON-B250E/2020 | R | 403 | S | 1 | 20200410 |
| EPI_ISL_454538 | Spike | hCoV-19/India/MH-NIV-5118/2020 | G | 404 | K | 1 | 20200326 |
| EPI_ISL_780427 | Spike | hCoV-19/USA/TX-HMH-MCoV-9324/2020 | G | 404 | S | 2 (geo) | 20200703 |
| EPI_ISL_562185 | Spike | hCoV-19/Australia/VIC10669/2020 | G | 404 | V | 3 (geo) | 20200730 |
| EPI_ISL_554000 | Spike | hCoV-19/England/ALDP-956442/2020 | G | 404 | C | 2 (geo) | 20200608 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | G | 404 | F | 1 | 20200921 |
| EPI_ISL_507590 | Spike | hCoV-19/USA/MI-MDHHS-SC21335/2020 | G | 404 | A | 1 | 20200402 |
| EPI_ISL_722055 | Spike | hCoV-19/Brazil/SP-L32-CD820/2020 | D | 405 | Y | 4 (geo) | 20200408 |
| EPI_ISL_651293 | Spike | hCoV-19/Scotland/QEUH-A9C3CA/2020 | D | 405 | G | 2 (geo) | 20201020 |
| EPI_ISL_454538 | Spike | hCoV-19/India/MH-NIV-5118/2020 | D | 405 | C | 1 | 20200326 |
| EPI_ISL_769864 | Spike | hCoV-19/England/204690144/2020 | D | 405 | M | 1 | 20201113 |
| EPI_ISL_760092 | Spike | hCoV-19/South Korea/KDCA0298/2020 | D | 405 | E | 3 (geo) | 20201027 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | D | 405 | Q | 1 | 20200921 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | D | 405 | R | 1 | 20201113 |
| EPI_ISL_443740 | Spike | hCoV-19/England/BRIS-125D3A/2020 | E | 406 | Q | 34 (geo) | 20200330 |
| EPI_ISL_787658 | Spike | hCoV-19/USA/TX-HMH-MCoV-14373/2020 | E | 406 | K | 2 (geo) | 20201006 |
| EPI_ISL_512379 | Spike | hCoV-19/England/NOTT-112E1F/2020 | E | 406 | D | 2 (geo) | 20200723 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | E | 406 | T | 1 | 20200921 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | E | 406 | G | 1 | 20201113 |
| EPI_ISL_591344 | Spike | hCoV-19/Iran/SA-Isf-53/2020 | V | 407 | L | 3 (geo) | 20200510 |
| EPI_ISL_509713 | Spike | hCoV-19/Belize/CDC-6851/2020 | V | 407 | I | 2 (geo) | 20200327 |
| EPI_ISL_708824 | Spike | hCoV-19/Thailand/Bangkok-Geo05/2020 | V | 407 | A | 8 (geo) | 20200000 |
| EPI_ISL_666827 | Spike | hCoV-19/USA/FL-BPHL-2205/2020 | V | 407 | F | 1 | 20200807 |
| EPI_ISL_454541 | Spike | hCoV-19/India/MH-NIV-6285/2020 | V | 407 | R | 1 | 20200330 |
| EPI_ISL_769864 | Spike | hCoV-19/England/204690144/2020 | V | 407 | S | 1 | 20201113 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | V | 407 | D | 2 (geo) | 20200000 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | V | 407 | G | 1 | 20200319 |
| EPI_ISL_479081 | Spike | hCoV-19/England/OXON-B1C55/2020 | R | 408 | I | 53 (geo) | 20200000 |
| EPI_ISL_525086 | Spike | hCoV-19/USA/UT-UPHL-2009079/2020 | R | 408 | K | 22 (geo) | 20200513 |
| EPI_ISL_543981 | Spike | hCoV-19/USA/TX-HMH-3080/2020 | R | 408 | T | 9 (geo) | 20200610 |
| EPI_ISL_769864 | Spike | hCoV-19/England/204690144/2020 | R | 408 | D | 1 | 20201113 |
| EPI_ISL_579132 | Spike | hCoV-19/New Zealand/20VR1795/2020 | R | 408 | G | 2 (geo) | 20200322 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | R | 408 | L | 1 | 20200921 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | R | 408 | E | 1 | 20201113 |
| EPI_ISL_769864 | Spike | hCoV-19/England/204690144/2020 | Q | 409 | K | 1 | 20201113 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | Q | 409 | A | 1 | 20200921 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | Q | 409 | V | 1 | 20201113 |
| EPI_ISL_413863 | Spike | hCoV-19/Guangdong/GD2020087-P0008/2020 | Q | 409 | E | 1 | 20200201 |
| EPI_ISL_590213 | Spike | hCoV-19/England/ALDP-9B5C76/2020 | Q | 409 | H | 1 | 20200828 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | I | 410 | V | 26 (geo) | 20200319 |
| EPI_ISL_769864 | Spike | hCoV-19/England/204690144/2020 | I | 410 | S | 1 | 20201113 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | I | 410 | L | 1 | 20200921 |
| EPI_ISL_693486 | Spike | hCoV-19/England/204691067/2020 | I | 410 | R | 1 | 20201113 |
| EPI_ISL_454932 | Spike | hCoV-19/Wuhan/HB-WH2-166/2020 | A | 411 | S | 41 (geo) | 20200211 |
| EPI_ISL_568506 | Spike | hCoV-19/Iran/K1r-136/2020 | A | 411 | T | 4 (geo) | 20200427 |
| EPI_ISL_507007 | Spike | hCoV-19/Iran/IRVSH-01/2020 | A | 411 | D | 1 | 20200501 |
| EPI_ISL_769864 | Spike | hCoV-19/England/204690144/2020 | A | 411 | L | 1 | 20201113 |
| EPI_ISL_767848 | Spike | hCoV-19/Iran/K1r-146/2020 | A | 411 | P | 2 (geo) | 20200600 |
| EPI_ISL_801039 | Spike | hCoV-19/England/CAMC-BC2CCF/2020 | A | 411 | V | 1 | 20201121 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | A | 411 | H | 1 | 20200921 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | P | 412 | Q | 2 (geo) | 20200000 |
| EPI_ISL_849192 | Spike | hCoV-19/Argentina/INEI011618/2020 | P | 412 | L | 3 (geo) | 20200905 |
| EPI_ISL_591344 | Spike | hCoV-19/Iran/SA-Isf-53/2020 | P | 412 | S | 1 | 20200510 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | P | 412 | R | 1 | 20200921 |
| EPI_ISL_494466 | Spike | hCoV-19/USA/CA-ALSR-1266/2020 | G | 413 | R | 5 (geo) | 20200428 |
| EPI_ISL_466406 | Spike | hCoV-19/England/201620091/2020 | G | 413 | A | 1 | 20200413 |
| EPI_ISL_622140 | Spike | hCoV-19/Denmark/DCGC-4247/2020 | G | 413 | W | 2 (geo) | 20200914 |
| EPI_ISL_541037 | Spike | hCoV-19/Spain/GA-IBV-98006029/2020 | G | 413 | V | 2 (geo) | 20200401 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | G | 413 | S | 1 | 20200921 |
| EPI_ISL_454428 | Spike | hCoV-19/USA/MDH-7760/2020 | G | 413 | E | 3 (geo) | 20200312 |
| EPI_ISL_475015 | Spike | hCoV-19/Israel/CVL-n-6142/2020 | Q | 414 | K | 43 (geo) | 20200315 |
| EPI_ISL_441591 | Spike | hCoV-19/England/CAMB-7B7ED/2020 | Q | 414 | R | 73 (geo) | 20200402 |
| EPI_ISL_468154 | Spike | hCoV-19/Romania/Bucuresti-14658/2020 | Q | 414 | P | 1 | 20200417 |
| EPI_ISL_483716 | Spike | hCoV-19/Israel/n14288/2020 | Q | 414 | A | 3 (geo) | 20200405 |
| EPI_ISL_638424 | Spike | hCoV-19/England/CAMC-9DF809/2020 | Q | 414 | L | 2 (geo) | 20200919 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | Q | 414 | Y | 1 | 20200921 |
| EPI_ISL_854353 | Spike | hCoV-19/USA/NY-Wadsworth-21004828-01/2020 | Q | 414 | H | 1 | 20201230 |
| EPI_ISL_791360 | Spike | hCoV-19/USA/MD-HP12018/2020 | T | 415 | A | 6 (geo) | 20201107 |
| EPI_ISL_429522 | Spike | hCoV-19/Denmark/ALAB-SSI424A/2020 | T | 415 | I | 2 (geo) | 20200324 |
| EPI_ISL_608679 | Spike | hCoV-19/England/CAMC-A658DA/2020 | T | 415 | N | 6 (geo) | 20201011 |
| EPI_ISL_474996 | Spike | hCoV-19/Israel/CVL-n-7169/2020 | T | 415 | P | 1 | 20200411 |
| EPI_ISL_475014 | Spike | hCoV-19/Israel/CVL-n-5999/2020 | T | 415 | S | 1 | 20200315 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | T | 415 | L | 1 | 20200921 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | G | 416 | T | 1 | 20200921 |
| EPI_ISL_663501 | Spike | hCoV-19/Australia/VIC16977/2020 | G | 416 | E | 1 | 20200815 |
| EPI_ISL_853768 | Spike | hCoV-19/Austria/CeMM1952/2020 | K | 417 | N | 696 (geo) | 20200000 |
| EPI_ISL_833137 | Spike | hCoV-19/Brazil/AM-20842882CA/2020 | K | 417 | T | 36 (geo) | 20201204 |
| EPI_ISL_475016 | Spike | hCoV-19/Israel/CVL-n-10253/2020 | K | 417 | R | 3 (geo) | 20200421 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | K | 417 | P | 1 | 20200921 |
| EPI_ISL_851938 | Spike | hCoV-19/England/ALDP-F910E7/2021 | K | 417 | E | 1 | 20210110 |
| EPI_ISL_455568 | Spike | hCoV-19/USA/IA-GMF-02699/2020 | I | 418 | V | 2 (geo) | 20200508 |
| EPI_ISL_477968 | Spike | hCoV-19/Scotland/CVR2558/2020 | I | 418 | N | 1 | 20200416 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | I | 418 | G | 1 | 20200921 |
| EPI_ISL_603263 | Spike | hCoV-19/USA/WA-UW-2102/2020 | A | 419 | S | 18 (geo) | 20200325 |
| EPI_ISL_477968 | Spike | hCoV-19/Scotland/CVR2558/2020 | A | 419 | R | 1 | 20200416 |
| EPI_ISL_542745 | Spike | hCoV-19/USA/TX-HMH-1483/2020 | A | 419 | V | 1 | 20200430 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | A | 419 | D | 1 | 20200921 |
| EPI_ISL_733386 | Spike | hCoV-19/Russia/PSK-RII-MH6341S/2020 | A | 419 | G | 1 | 20201109 |
| EPI_ISL_842237 | Spike | hCoV-19/England/SHEF-10CA9D7/2021 | D | 420 | A | 3 (geo) | 20210107 |
| EPI_ISL_757536 | Spike | hCoV-19/Denmark/DCGC-22393/2020 | D | 420 | G | 1 | 20201214 |
| EPI_ISL_751225 | Spike | hCoV-19/Saudi Arabia/KAUST-MADINAH1669/2020 | D | 420 | N | 1 | 20200823 |
| EPI_ISL_621290 | Spike | hCoV-19/Denmark/DCGC-4621/2020 | D | 420 | S | 1 | 20200921 |
| EPI_ISL_600461 | Spike | hCoV-19/Bangladesh/G-115/2020 | Y | 421 | I | 1 | 20200620 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | K | 424 | F | 1 | 20200406 |
| EPI_ISL_831575 | Spike | hCoV-19/USA/WI-UW-2760/2020 | K | 424 | N | 1 | 20201231 |
| EPI_ISL_480330 | Spike | hCoV-19/England/NORW-E702D/2020 | K | 424 | L | 1 | 20200420 |
| EPI_ISL_856721 | Spike | hCoV-19/Italy/VEN-PD10/2020 | L | 425 | S | 2 (geo) | 20200313 |
| EPI_ISL_750083 | Spike | hCoV-19/Denmark/DCGC-18617/2020 | L | 425 | V | 1 | 20201207 |
| EPI_ISL_583717 | Spike | hCoV-19/Austria/CeMM0820/2020 | P | 426 | S | 3 (geo) | 20200513 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | P | 426 | L | 2 (geo) | 20200406 |
| EPI_ISL_548750 | Spike | hCoV-19/Canada/ON-PHL-20-00075/2020 | P | 426 | T | 2 (geo) | 20200000 |
| EPI_ISL_805838 | Spike | hCoV-19/Canada/AB-56215/2020 | D | 427 | G | 17 (geo) | 20200429 |
| EPI_ISL_699988 | Spike | hCoV-19/India/MH-ACTREC-339/2020 | D | 427 | A | 1 | 20200720 |
| EPI_ISL_516877 | Spike | hCoV-19/England/LOND-125FD9D/2020 | D | 427 | Y | 10 (geo) | 20200406 |
| EPI_ISL_687118 | Spike | hCoV-19/Japan/PG-8017/2020 | D | 427 | V | 12 (geo) | 20200800 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | D | 427 | N | 10 (geo) | 20200406 |
| EPI_ISL_676520 | Spike | hCoV-19/Sweden/20-08971/2020 | D | 427 | H | 5 (geo) | 20200804 |
| EPI_ISL_461431 | Spike | hCoV-19/USA/WA-UW-4754/2020 | D | 428 | G | 2 (geo) | 20200328 |
| EPI_ISL_625943 | Spike | hCoV-19/Denmark/DCGC-8580/2020 | D | 428 | V | 3 (geo) | 20201026 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | D | 428 | F | 1 | 20200406 |
| EPI_ISL_825090 | Spike | hCoV-19/SouthAfrica/KRISP-K006790/2020 | D | 428 | Y | 1 | 20201120 |
| EPI_ISL_509422 | Spike | hCoV-19/Italy/UN-IZSM-32790-1-2/2020 | D | 428 | I | 1 | 20200301 |
| EPI_ISL_450510 | Spike | hCoV-19/Lebanon/S3_760/2020 | F | 429 | L | 2 (geo) | 20200304 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | F | 429 | Y | 1 | 20200406 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | F | 429 | I | 1 | 20200000 |
| EPI_ISL_450510 | Spike | hCoV-19/Lebanon/S3_760/2020 | T | 430 | A | 3 (geo) | 20200304 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | T | 430 | I | 11 (geo) | 20200000 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | T | 430 | M | 1 | 20200406 |
| EPI_ISL_788833 | Spike | hCoV-19/USA/TX-HMH-MCoV-13740/2020 | T | 430 | S | 1 | 20200817 |
| EPI_ISL_479561 | Spike | hCoV-19/India/MH-NIV-65281/2020 | T | 430 | N | 1 | 20200616 |
| EPI_ISL_677888 | Spike | hCoV-19/USA/CA-IGI-0773/2020 | T | 430 | P | 2 (geo) | 20200801 |
| EPI_ISL_450510 | Spike | hCoV-19/Lebanon/S3_760/2020 | G | 431 | W | 1 | 20200304 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | G | 431 | H | 1 | 20200406 |
| EPI_ISL_730576 | Spike | hCoV-19/Turkey/Ankara_GUMV_10711/2020 | G | 431 | D | 1 | 20200625 |
| EPI_ISL_479561 | Spike | hCoV-19/India/MH-NIV-65281/2020 | G | 431 | S | 1 | 20200616 |
| EPI_ISL_788888 | Spike | hCoV-19/USA/TX-HMH-MCoV-13795/2020 | G | 431 | V | 1 | 20200817 |
| EPI_ISL_450510 | Spike | hCoV-19/Lebanon/S3_760/2020 | C | 432 | N | 1 | 20200304 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | C | 432 | Q | 1 | 20200406 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | C | 432 | R | 1 | 20200000 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | C | 432 | W | 1 | 20200712 |
| EPI_ISL_454932 | Spike | hCoV-19/Wuhan/HB-WH2-166/2020 | C | 432 | F | 1 | 20200211 |
| EPI_ISL_816807 | Spike | hCoV-19/England/TFCI-26FA47A/2020 | V | 433 | I | 5 (geo) | 20200408 |
| EPI_ISL_790496 | Spike | hCoV-19/USA/TX-HMH-MCoV-12739/2020 | V | 433 | F | 1 | 20200830 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | V | 433 | Q | 1 | 20200406 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | V | 433 | N | 2 (geo) | 20200712 |
| EPI_ISL_833522 | Spike | hCoV-19/Italy/CAM-TIGEM-892/2020 | V | 433 | D | 1 | 20200429 |
| EPI_ISL_463059 | Spike | hCoV-19/India/OR-ILSCV18287/2020 | V | 433 | A | 1 | 20200513 |
| EPI_ISL_861651 | Spike | hCoV-19/Brazil/SP-957/2020 | I | 434 | V | 12 (geo) | 20200510 |
| EPI_ISL_450510 | Spike | hCoV-19/Lebanon/S3_760/2020 | I | 434 | L | 3 (geo) | 20200304 |
| EPI_ISL_429690 | Spike | hCoV-19/Brazil/MG-CV34/2020 | I | 434 | M | 1 | 20200318 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | I | 434 | R | 1 | 20200712 |
| EPI_ISL_424362 | Spike | hCoV-19/India/UN-1135/2020 | I | 434 | K | 1 | 20200310 |
| EPI_ISL_593993 | Spike | hCoV-19/England/204221495/2020 | A | 435 | S | 7 (geo) | 20200000 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | A | 435 | F | 1 | 20200406 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | A | 435 | K | 1 | 20200712 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | W | 436 | V | 1 | 20200406 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | W | 436 | R | 1 | 20200712 |
| EPI_ISL_536564 | Spike | hCoV-19/Peru/LAM-INS-171/2020 | N | 437 | S | 3 (geo) | 20200401 |
| EPI_ISL_568498 | Spike | hCoV-19/Iran/K1r-64/2020 | N | 437 | I | 3 (geo) | 20200325 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | N | 437 | D | 1 | 20200406 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | S | 438 | L | 1 | 20200406 |
| EPI_ISL_786341 | Spike | hCoV-19/USA/TX-HMH-MCoV-14857/2020 | S | 438 | P | 1 | 20201013 |
| EPI_ISL_824586 | Spike | hCoV-19/USA/CA-CSMC175/2020 | S | 438 | A | 1 | 20201228 |
| EPI_ISL_789811 | Spike | hCoV-19/USA/TX-HMH-MCoV-12589/2020 | S | 438 | Y | 1 | 20200831 |
| EPI_ISL_740989 | Spike | hCoV-19/England/CAMB-1BD906/2020 | N | 439 | K | 9272 (geo) | 20200000 |
| EPI_ISL_868154 | Spike | hCoV-19/England/PORT-2E4B0F/2021 | N | 439 | S | 1 | 20210111 |
| EPI_ISL_651382 | Spike | hCoV-19/England/CAMB-1B8A9F/2020 | N | 440 | K | 98 (geo) | 20200000 |
| EPI_ISL_684927 | Spike | hCoV-19/Japan/PG-1319/2020 | N | 440 | Y | 12 (geo) | 20200400 |
| EPI_ISL_593557 | Spike | hCoV-19/USA/MA-JLL-D146/2020 | N | 440 | D | 3 (geo) | 20200903 |
| EPI_ISL_587053 | Spike | hCoV-19/England/ALDP-A2F4BA/2020 | N | 440 | S | 4 (geo) | 20201006 |
| EPI_ISL_573207 | Spike | hCoV-19/England/CAMC-9C1846/2020 | N | 440 | T | 1 | 20200910 |
| EPI_ISL_591343 | Spike | hCoV-19/Iran/SA-Isf-65/2020 | N | 440 | H | 1 | 20200806 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | N | 440 | C | 1 | 20200712 |
| EPI_ISL_786213 | Spike | hCoV-19/USA/TX-HMH-MCoV-14728/2020 | L | 441 | R | 1 | 20201001 |
| EPI_ISL_536120 | Spike | hCoV-19/Canada/QC-LSPQ-L00236212/2020 | L | 441 | F | 4 (geo) | 20200324 |
| EPI_ISL_480948 | Spike | hCoV-19/USA/FL-BPHL-0297/2020 | L | 441 | I | 3 (geo) | 20200515 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | L | 441 | V | 2 (geo) | 20200712 |
| EPI_ISL_413752 | Spike | hCoV-19/China/WF0023/2020 | D | 442 | H | 1 | 20200200 |
| EPI_ISL_707957 | Spike | hCoV-19/Germany/SL-SU-10429188/2020 | D | 442 | Y | 3 (geo) | 20200324 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | D | 442 | A | 1 | 20200712 |
| EPI_ISL_582008 | Spike | hCoV-19/Iran/SA-Isf-62/2020 | S | 443 | C | 1 | 20200510 |
| EPI_ISL_699872 | Spike | hCoV-19/India/MH-ACTREC-218/2020 | S | 443 | A | 5 (geo) | 20200629 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | S | 443 | D | 1 | 20200712 |
| EPI_ISL_805979 | Spike | hCoV-19/Canada/AB-92725/2020 | K | 444 | N | 26 (geo) | 20200409 |
| EPI_ISL_444976 | Spike | hCoV-19/Spain/CT-HUVH-VH7773/2020 | K | 444 | R | 36 (geo) | 20200406 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | K | 444 | Y | 1 | 20200712 |
| EPI_ISL_455432 | Spike | hCoV-19/Mexico/DUR-InDRE-09/2020 | V | 445 | A | 25 (geo) | 20200311 |
| EPI_ISL_707962 | Spike | hCoV-19/Germany/SL-SU-10431123/2020 | V | 445 | I | 8 (geo) | 20200401 |
| EPI_ISL_795176 | Spike | hCoV-19/Denmark/DCGC-24535/2020 | V | 445 | L | 1 | 20201228 |
| EPI_ISL_524473 | Spike | hCoV-19/Peru/LIM-INS-060/2020 | V | 445 | F | 3 (geo) | 20200401 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | V | 445 | S | 1 | 20200712 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | G | 446 | V | 116 (geo) | 20200000 |
| EPI_ISL_440772 | Spike | hCoV-19/England/BRIS-122517/2020 | G | 446 | S | 11 (geo) | 20200404 |
| EPI_ISL_666833 | Spike | hCoV-19/USA/FL-BPHL-2211/2020 | G | 446 | D | 3 (geo) | 20200511 |
| EPI_ISL_488125 | Spike | hCoV-19/England/NORT-29DBC9/2020 | G | 446 | A | 2 (geo) | 20200507 |
| EPI_ISL_737248 | Spike | hCoV-19/USA/CA-LACPHL-AF00013/2020 | G | 447 | V | 3 (geo) | 20201215 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | G | 447 | L | 1 | 20200712 |
| EPI_ISL_781534 | Spike | hCoV-19/England/CAMC-CF4B7B/2020 | N | 448 | S | 3 (geo) | 20201221 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | N | 448 | K | 2 (geo) | 20200425 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | N | 448 | Y | 1 | 20200712 |
| EPI_ISL_857172 | Spike | hCoV-19/USA/NY-NYCPHL-002350/2021 | N | 448 | D | 1 | 20210111 |
| EPI_ISL_736453 | Spike | hCoV-19/England/MILK-C5299F/2020 | Y | 449 | H | 1 | 20201211 |
| EPI_ISL_417919 | Spike | hCoV-19/Malaysia/186197/2020 | Y | 449 | N | 2 (geo) | 20200314 |
| EPI_ISL_578197 | Spike | hCoV-19/Spain/RI-ISCIII-201566/2020 | Y | 449 | F | 1 | 20200304 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | N | 450 | K | 18 (geo) | 20200000 |
| EPI_ISL_533204 | Spike | hCoV-19/England/QEUH-76CAB2/2020 | N | 450 | D | 3 (geo) | 20200714 |
| EPI_ISL_509415 | Spike | hCoV-19/Turkey/ACUTG-4/2020 | N | 450 | S | 3 (geo) | 20200403 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | Y | 451 | F | 1 | 20200000 |
| EPI_ISL_787042 | Spike | hCoV-19/USA/TX-HMH-MCoV-15558/2020 | Y | 451 | H | 1 | 20201026 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | Y | 451 | A | 1 | 20200712 |
| EPI_ISL_738024 | Spike | hCoV-19/Uganda/UG117/2020 | L | 452 | R | 1118 (geo) | 20200000 |
| EPI_ISL_574784 | Spike | hCoV-19/Netherlands/NB-EMC-286/2020 | L | 452 | M | 69 (geo) | 20200000 |
| EPI_ISL_539532 | Spike | hCoV-19/Spain/CN-ISCIII-201810/2020 | L | 452 | Q | 10 (geo) | 20200306 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | L | 452 | S | 1 | 20200712 |
| EPI_ISL_591325 | Spike | hCoV-19/Iran/K1r-171/2020 | L | 452 | P | 1 | 20200500 |
| EPI_ISL_523390 | Spike | hCoV-19/Netherlands/NB-EMC-267/2020 | Y | 453 | F | 1049 (geo) | 20200000 |
| EPI_ISL_862660 | Spike | hCoV-19/Germany/NW-ChVir22076/2021 | Y | 453 | H | 1 | 20210102 |
| EPI_ISL_788273 | Spike | hCoV-19/USA/TX-HMH-MCoV-13122/2020 | R | 454 | G | 1 | 20200827 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | R | 454 | S | 1 | 20200712 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | R | 454 | Y | 1 | 20200418 |
| EPI_ISL_519961 | Spike | hCoV-19/Australia/VIC5196/2020 | L | 455 | F | 57 (geo) | 20200000 |
| EPI_ISL_672592 | Spike | hCoV-19/Iran/SA-Isf-40/2020 | L | 455 | W | 1 | 20200610 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | L | 455 | T | 1 | 20200712 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | L | 455 | R | 1 | 20200418 |
| EPI_ISL_497968 | Spike | hCoV-19/South Korea/KCDC2067/2020 | F | 456 | L | 5 (geo) | 20200219 |
| EPI_ISL_800200 | Spike | hCoV-19/England/QEUH-D19975/2020 | F | 456 | Y | 1 | 20201226 |
| EPI_ISL_568483 | Spike | hCoV-19/Iran/K1r-4/2020 | R | 457 | K | 4 (geo) | 20200322 |
| EPI_ISL_596380 | Spike | hCoV-19/Iran/K1r-73/2020 | R | 457 | T | 2 (geo) | 20200400 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | R | 457 | S | 1 | 20200425 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | R | 457 | F | 1 | 20200418 |
| EPI_ISL_486275 | Spike | hCoV-19/USA/CA-CZB-2023/2020 | K | 458 | Q | 3 (geo) | 20200429 |
| EPI_ISL_419231 | Spike | hCoV-19/Hong Kong/HKPU63-1402/2020 | K | 458 | N | 9 (geo) | 20200219 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | K | 458 | R | 4 (geo) | 20200418 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | K | 458 | C | 1 | 20200712 |
| EPI_ISL_483551 | Spike | hCoV-19/Bahrein/BAH-10/2020 | S | 459 | F | 107 (geo) | 20200330 |
| EPI_ISL_435059 | Spike | hCoV-19/South Africa/R05475/2020 | S | 459 | Y | 46 (geo) | 20200320 |
| EPI_ISL_836984 | Spike | hCoV-19/England/205221680/2020 | S | 459 | P | 2 (geo) | 20201218 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | S | 459 | K | 1 | 20200418 |
| EPI_ISL_624172 | Spike | hCoV-19/England/ALDP-AA372E/2020 | N | 460 | K | 2 (geo) | 20201021 |
| EPI_ISL_467563 | Spike | hCoV-19/USA/NM-UNM-00136/2020 | N | 460 | S | 3 (geo) | 20200403 |
| EPI_ISL_683451 | Spike | hCoV-19/Armenia/ChVir8668/2020 | N | 460 | I | 5 (geo) | 20200000 |
| EPI_ISL_430139 | Spike | hCoV-19/USA/WA-S285/2020 | N | 460 | T | 2 (geo) | 20200329 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | N | 460 | G | 1 | 20200712 |
| EPI_ISL_788403 | Spike | hCoV-19/USA/TX-HMH-MCoV-13253/2020 | L | 461 | P | 1 | 20200825 |
| EPI_ISL_686378 | Spike | hCoV-19/Japan/PG-8789/2020 | L | 461 | I | 1 | 20200800 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | L | 461 | V | 1 | 20200712 |
| EPI_ISL_583322 | Spike | hCoV-19/USA/MI-UM-10035824100/2020 | L | 461 | F | 1 | 20200905 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | L | 461 | N | 1 | 20200418 |
| EPI_ISL_646522 | Spike | hCoV-19/England/ALDP-B25F3A/2020 | K | 462 | T | 6 (geo) | 20201104 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | K | 462 | S | 1 | 20200712 |
| EPI_ISL_511624 | Spike | hCoV-19/Portugal/PT1077/2020 | K | 462 | N | 1 | 20200328 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | K | 462 | L | 1 | 20200418 |
| EPI_ISL_452656 | Spike | hCoV-19/Spain/PV-IBV-000911/2020 | P | 463 | S | 30 (geo) | 20200326 |
| EPI_ISL_464220 | Spike | hCoV-19/England/20099071904/2020 | P | 463 | L | 3 (geo) | 20200229 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | P | 463 | H | 1 | 20200000 |
| EPI_ISL_489744 | Spike | hCoV-19/USA/FL-BPHL-0335/2020 | P | 463 | R | 1 | 20200420 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | P | 463 | K | 1 | 20200418 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | F | 464 | C | 1 | 20200000 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | F | 464 | L | 1 | 20200425 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | F | 464 | T | 1 | 20200712 |
| EPI_ISL_514422 | Spike | hCoV-19/South Africa/LR00154/2020 | E | 465 | D | 5 (geo) | 20200723 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | E | 465 | K | 1 | 20200712 |
| EPI_ISL_641713 | Spike | hCoV-19/England/QEUH-B140FF/2020 | R | 466 | K | 3 (geo) | 20201103 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | R | 466 | L | 1 | 20200712 |
| EPI_ISL_646685 | Spike | hCoV-19/England/QEUH-B2C8CF/2020 | R | 466 | I | 1 | 20201103 |
| EPI_ISL_856714 | Spike | hCoV-19/Italy/VEN-PD03/2020 | R | 466 | G | 1 | 20200305 |
| EPI_ISL_814090 | Spike | hCoV-19/Turkey/HSGM-2002084/2020 | D | 467 | Y | 2 (geo) | 20200804 |
| EPI_ISL_419846 | Spike | hCoV-19/Australia/VIC149/2020 | D | 467 | V | 1 | 20200317 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | D | 467 | K | 1 | 20200425 |
| EPI_ISL_591324 | Spike | hCoV-19/Iran/K1r-69/2020 | D | 467 | N | 2 (geo) | 20200400 |
| EPI_ISL_437323 | Spike | hCoV-19/Turkey/HSGM-1481/2020 | I | 468 | V | 24 (geo) | 20200319 |
| EPI_ISL_419846 | Spike | hCoV-19/Australia/VIC149/2020 | I | 468 | F | 4 (geo) | 20200317 |
| EPI_ISL_419868 | Spike | hCoV-19/Australia/VIC171/2020 | I | 468 | T | 9 (geo) | 20200318 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | I | 468 | D | 1 | 20200712 |
| EPI_ISL_540948 | Spike | hCoV-19/Peru/LIM-UPCH-0065/2020 | I | 468 | L | 2 (geo) | 20200618 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | S | 469 | Q | 1 | 20200425 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | S | 469 | L | 3 (geo) | 20200712 |
| EPI_ISL_469887 | Spike | hCoV-19/Northern Ireland/NIRE-101569/2020 | S | 469 | A | 2 (geo) | 20200429 |
| EPI_ISL_529797 | Spike | hCoV-19/South Africa/KRISP-K002803/2020 | S | 469 | P | 1 | 20200824 |
| EPI_ISL_678057 | Spike | hCoV-19/Saudi Arabia/KAUST-MAKKAH149/2020 | T | 470 | I | 14 (geo) | 20200324 |
| EPI_ISL_500462 | Spike | hCoV-19/Brazil/PE-IAM103/2020 | T | 470 | A | 12 (geo) | 20200409 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | T | 470 | N | 13 (geo) | 20200425 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | T | 470 | C | 1 | 20200712 |
| EPI_ISL_754882 | Spike | hCoV-19/USA/CA-IGI-0392/2020 | E | 471 | A | 4 (geo) | 20200717 |
| EPI_ISL_474678 | Spike | hCoV-19/Wales/PHWC-36520/2020 | E | 471 | Q | 27 (geo) | 20200430 |
| EPI_ISL_553110 | Spike | hCoV-19/England/MILK-9703EB/2020 | E | 471 | G | 8 (geo) | 20200818 |
| EPI_ISL_508226 | Spike | hCoV-19/India/MH-GA32/2020 | E | 471 | D | 2 (geo) | 20200620 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | E | 471 | F | 1 | 20200712 |
| EPI_ISL_684127 | Spike | hCoV-19/Japan/PG-0116/2020 | E | 471 | K | 1 | 20200200 |
| EPI_ISL_418356 | Spike | hCoV-19/Canada/ON-PHL-6980/2020 | I | 472 | V | 12 (geo) | 20200300 |
| EPI_ISL_708505 | Spike | hCoV-19/USA/CA-LACPHL-AD00005/2020 | I | 472 | T | 6 (geo) | 20200505 |
| EPI_ISL_668797 | Spike | hCoV-19/Denmark/DCGC-9651/2020 | I | 472 | L | 9 (geo) | 20201109 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | I | 472 | N | 1 | 20200425 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | Y | 473 | N | 1 | 20200712 |
| EPI_ISL_573365 | Spike | hCoV-19/England/NORT-2A0D18/2020 | Y | 473 | F | 1 | 20200428 |
| EPI_ISL_602562 | Spike | hCoV-19/USA/NY-SBU-A58444/2020 | Q | 474 | H | 1 | 20200425 |
| EPI_ISL_591343 | Spike | hCoV-19/Iran/SA-Isf-65/2020 | Q | 474 | P | 1 | 20200806 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | Q | 474 | V | 1 | 20200712 |
| EPI_ISL_542266 | Spike | hCoV-19/Italy/LOM-UniMI-L314/2020 | A | 475 | V | 90 (geo) | 20200301 |
| EPI_ISL_621382 | Spike | hCoV-19/Denmark/DCGC-4772/2020 | A | 475 | S | 66 (geo) | 20200921 |
| EPI_ISL_767063 | Spike | hCoV-19/USA/NM-DOH-2020641408/2020 | A | 475 | T | 2 (geo) | 20201226 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | A | 475 | Y | 1 | 20200712 |
| EPI_ISL_417081 | Spike | hCoV-19/USA/WA-S28/2020 | G | 476 | S | 51 (geo) | 20200302 |
| EPI_ISL_507754 | Spike | hCoV-19/USA/MI-MDHHS-SC20966/2020 | G | 476 | A | 6 (geo) | 20200327 |
| EPI_ISL_579913 | Spike | hCoV-19/England/QEUH-9E4DB7/2020 | G | 476 | F | 1 | 20200919 |
| EPI_ISL_640800 | Spike | hCoV-19/Australia/VIC12494/2020 | S | 477 | N | 21936 (geo) | 20200000 |
| EPI_ISL_751347 | Spike | hCoV-19/Italy/VEN-UniVR-35/2020 | S | 477 | G | 9 (geo) | 20200307 |
| EPI_ISL_498152 | Spike | hCoV-19/Colombia/MAG-INS-87968/2020 | S | 477 | I | 185 (geo) | 20200325 |
| EPI_ISL_448492 | Spike | hCoV-19/England/OXON-AC8FF/2020 | S | 477 | R | 324 (geo) | 20200406 |
| EPI_ISL_507103 | Spike | hCoV-19/England/LOND-124D4CA/2020 | S | 477 | T | 4 (geo) | 20200514 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | S | 477 | D | 1 | 20200712 |
| EPI_ISL_520441 | Spike | hCoV-19/Australia/VIC3706/2020 | S | 477 | K | 1 | 20200712 |
| EPI_ISL_438572 | Spike | hCoV-19/England/CAMB-81140/2020 | T | 478 | I | 220 (geo) | 20200000 |
| EPI_ISL_525481 | Spike | hCoV-19/Sri Lanka/CDR-SL7066/2020 | T | 478 | R | 30 (geo) | 20200616 |
| EPI_ISL_722476 | Spike | hCoV-19/Netherlands/NB-EMC-399/2020 | T | 478 | K | 92 (geo) | 20200000 |
| EPI_ISL_485193 | Spike | hCoV-19/USA/LA-GBCL-26556563/2020 | T | 478 | A | 2 (geo) | 20200415 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | T | 478 | S | 1 | 20200712 |
| EPI_ISL_523395 | Spike | hCoV-19/Netherlands/NB-EMC-273/2020 | P | 479 | S | 133 (geo) | 20200000 |
| EPI_ISL_463284 | Spike | hCoV-19/USA/LA-BIE-036/2020 | P | 479 | L | 20 (geo) | 20200403 |
| EPI_ISL_780231 | Spike | hCoV-19/USA/TX-HMH-MCoV-9701/2020 | P | 479 | H | 9 (geo) | 20200704 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | P | 479 | F | 1 | 20200712 |
| EPI_ISL_568482 | Spike | hCoV-19/Iran/K1r-1/2020 | C | 480 | W | 1 | 20200322 |
| EPI_ISL_545991 | Spike | hCoV-19/USA/TX-HMH-6431/2020 | C | 480 | F | 1 | 20200704 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | C | 480 | V | 1 | 20200712 |
| EPI_ISL_644812 | Spike | hCoV-19/Zimbabwe/ZW-9494/2020 | N | 481 | K | 43 (geo) | 20200601 |
| EPI_ISL_812715 | Spike | hCoV-19/Peru/LIM-UPCH-0321/2020 | N | 481 | Y | 4 (geo) | 20201210 |
| EPI_ISL_756247 | Spike | hCoV-19/Finland/12KS4D4/2020 | N | 481 | S | 7 (geo) | 20200612 |
| EPI_ISL_537218 | Spike | hCoV-19/England/SHEF-10B2BFA/2020 | N | 481 | D | 14 (geo) | 20200506 |
| EPI_ISL_419773 | Spike | hCoV-19/Australia/VIC61/2020 | N | 481 | H | 1 | 20200313 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | N | 481 | I | 1 | 20200712 |
| EPI_ISL_705507 | Spike | hCoV-19/England/CAMB-1B9032/2020 | G | 482 | S | 12 (geo) | 20200000 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | G | 482 | R | 1 | 20200712 |
| EPI_ISL_646083 | Spike | hCoV-19/England/CAMC-B22270/2020 | G | 482 | A | 1 | 20201102 |
| EPI_ISL_679977 | Spike | hCoV-19/England/PORT-2E9F95/2020 | V | 483 | A | 73 (geo) | 20200000 |
| EPI_ISL_436381 | Spike | hCoV-19/Spain/VC-FISABIO-286/2020 | V | 483 | F | 75 (geo) | 20200318 |
| EPI_ISL_425319 | Spike | hCoV-19/England/CAMB-74650/2020 | V | 483 | I | 12 (geo) | 20200328 |
| EPI_ISL_849288 | Spike | hCoV-19/Argentina/INEI030336/2020 | V | 483 | L | 7 (geo) | 20200628 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | V | 483 | G | 1 | 20200712 |
| EPI_ISL_853768 | Spike | hCoV-19/Austria/CeMM1952/2020 | E | 484 | K | 1067 (geo) | 20200000 |
| EPI_ISL_766365 | Spike | hCoV-19/Gibraltar/205121243/2020 | E | 484 | G | 10 (geo) | 20200000 |
| EPI_ISL_620132 | Spike | hCoV-19/Denmark/DCGC-1747/2020 | E | 484 | Q | 66 (geo) | 20200309 |
| EPI_ISL_455588 | Spike | hCoV-19/Thailand/Trang_5008/2020 | E | 484 | D | 9 (geo) | 20200323 |
| EPI_ISL_578200 | Spike | hCoV-19/Spain/RI-ISCIII-201573/2020 | E | 484 | A | 15 (geo) | 20200303 |
| EPI_ISL_528438 | Spike | hCoV-19/England/20342000104/2020 | E | 484 | R | 4 (geo) | 20200812 |
| EPI_ISL_666817 | Spike | hCoV-19/USA/FL-BPHL-2195/2020 | E | 484 | V | 1 | 20200727 |
| EPI_ISL_456507 | Spike | hCoV-19/Australia/VIC1587/2020 | G | 485 | R | 40 (geo) | 20200000 |
| EPI_ISL_685520 | Spike | hCoV-19/Japan/PG-1914/2020 | G | 485 | T | 1 | 20200400 |
| EPI_ISL_649711 | Spike | hCoV-19/Scotland/QEUH-AD1AC4/2020 | G | 485 | V | 2 (geo) | 20201024 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | G | 485 | E | 1 | 20200712 |
| EPI_ISL_568488 | Spike | hCoV-19/Iran/K1r-19/2020 | G | 485 | S | 2 (geo) | 20200322 |
| EPI_ISL_632382 | Spike | hCoV-19/Netherlands/LI-EMC-92/2020 | F | 486 | L | 35 (geo) | 20200000 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | F | 486 | V | 1 | 20200712 |
| EPI_ISL_593558 | Spike | hCoV-19/USA/MA-JLL-D152/2020 | F | 486 | I | 1 | 20200909 |
| EPI_ISL_596382 | Spike | hCoV-19/Iran/K1r-114/2020 | N | 487 | I | 4 (geo) | 20200500 |
| EPI_ISL_568496 | Spike | hCoV-19/Iran/K1r-32/2020 | N | 487 | K | 1 | 20200224 |
| EPI_ISL_856714 | Spike | hCoV-19/Italy/VEN-PD03/2020 | N | 487 | H | 2 (geo) | 20200305 |
| EPI_ISL_788095 | Spike | hCoV-19/USA/TX-HMH-MCoV-12943/2020 | N | 487 | D | 1 | 20200818 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | N | 487 | R | 1 | 20200712 |
| EPI_ISL_568482 | Spike | hCoV-19/Iran/K1r-1/2020 | C | 488 | W | 1 | 20200322 |
| EPI_ISL_596378 | Spike | hCoV-19/Iran/K1r-72/2020 | C | 488 | R | 1 | 20200400 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | C | 488 | Q | 1 | 20200712 |
| EPI_ISL_552392 | Spike | hCoV-19/England/MILK-99469D/2020 | Y | 489 | H | 3 (geo) | 20200825 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | Y | 489 | I | 1 | 20200712 |
| EPI_ISL_685416 | Spike | hCoV-19/Japan/PG-1810/2020 | F | 490 | S | 74 (geo) | 20200400 |
| EPI_ISL_427042 | Spike | hCoV-19/Australia/VIC766/2020 | F | 490 | L | 28 (geo) | 20200318 |
| EPI_ISL_791947 | Spike | hCoV-19/USA/MA-MGH-01415/2020 | F | 490 | V | 5 (geo) | 20200507 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | F | 490 | A | 1 | 20200712 |
| EPI_ISL_849745 | Spike | hCoV-19/Australia/QLD1480/2020 | F | 490 | Y | 2 (geo) | 20201224 |
| EPI_ISL_419737 | Spike | hCoV-19/Australia/VIC18/2020 | P | 491 | R | 1 | 20200307 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | P | 491 | H | 1 | 20200000 |
| EPI_ISL_417920 | Spike | hCoV-19/Malaysia/190300/2020 | P | 491 | L | 3 (geo) | 20200322 |
| EPI_ISL_454299 | Spike | hCoV-19/Portugal/PT0576/2020 | P | 491 | S | 1 | 20200413 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | L | 492 | G | 1 | 20200712 |
| EPI_ISL_578634 | Spike | hCoV-19/USA/WI-WSLH-200493/2020 | Q | 493 | L | 13 (geo) | 20200519 |
| EPI_ISL_866167 | Spike | hCoV-19/England/LOND-13236E1/2021 | Q | 493 | P | 1 | 20210112 |
| EPI_ISL_593554 | Spike | hCoV-19/USA/MA-JLL-D128/2020 | Q | 493 | K | 5 (geo) | 20200816 |
| EPI_ISL_655262 | Spike | hCoV-19/England/QEUH-B6827E/2020 | Q | 493 | H | 1 | 20201111 |
| EPI_ISL_470150 | Spike | hCoV-19/England/CAMB-1AB68C/2020 | Q | 493 | R | 2 (geo) | 20200422 |
| EPI_ISL_837887 | Spike | hCoV-19/England/CAMB-A9A757/2020 | S | 494 | P | 507 (geo) | 20200000 |
| EPI_ISL_681740 | Spike | hCoV-19/Ireland/LK-UHL287/2020 | S | 494 | L | 20 (geo) | 20200420 |
| EPI_ISL_569549 | Spike | hCoV-19/France/PAC-IHU-0494/2020 | S | 494 | A | 7 (geo) | 20200403 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | S | 494 | T | 1 | 20200712 |
| EPI_ISL_521450 | Spike | hCoV-19/Australia/VIC7169/2020 | Y | 495 | F | 2 (geo) | 20200402 |
| EPI_ISL_543837 | Spike | hCoV-19/USA/TX-HMH-2867/2020 | Y | 495 | S | 1 | 20200607 |
| EPI_ISL_429783 | Spike | hCoV-19/Luxembourg/LNS9207105/2020 | Y | 495 | N | 1 | 20200327 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | Y | 495 | G | 1 | 20200712 |
| EPI_ISL_487294 | Spike | hCoV-19/South Africa/KRISP-0310/2020 | G | 496 | C | 2 (geo) | 20200624 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | G | 496 | K | 1 | 20200712 |
| EPI_ISL_820395 | Spike | hCoV-19/England/ALDP-C69B17/2020 | G | 496 | S | 1 | 20201214 |
| EPI_ISL_793259 | Spike | hCoV-19/Denmark/DCGC-23925/2020 | G | 496 | V | 1 | 20201214 |
| EPI_ISL_511424 | Spike | hCoV-19/Portugal/PT1465/2020 | F | 497 | L | 1 | 20200330 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | F | 497 | I | 2 (geo) | 20200000 |
| EPI_ISL_568496 | Spike | hCoV-19/Iran/K1r-32/2020 | Q | 498 | P | 1 | 20200224 |
| EPI_ISL_672581 | Spike | hCoV-19/Iran/SA-Isf-27/2020 | Q | 498 | H | 2 (geo) | 20200706 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | Q | 498 | E | 1 | 20200401 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | Q | 498 | A | 1 | 20200712 |
| EPI_ISL_857839 | Spike | hCoV-19/England/CAMC-FB4637/2021 | Q | 498 | K | 1 | 20210111 |
| EPI_ISL_805357 | Spike | hCoV-19/Canada/AB-63772/2020 | P | 499 | H | 11 (geo) | 20200508 |
| EPI_ISL_488037 | Spike | hCoV-19/England/NORT-2960D0/2020 | P | 499 | S | 12 (geo) | 20200518 |
| EPI_ISL_648211 | Spike | hCoV-19/Argentina/argenTAG-1283F02A/2020 | P | 499 | L | 2 (geo) | 20200722 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | P | 499 | Q | 1 | 20200401 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | P | 499 | D | 1 | 20200712 |
| EPI_ISL_515040 | Spike | hCoV-19/South Korea/KCDC2638/2020 | P | 499 | R | 1 | 20200708 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | T | 500 | I | 2 (geo) | 20200300 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | T | 500 | S | 2 (geo) | 20200401 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | T | 500 | Y | 1 | 20200712 |
| EPI_ISL_568498 | Spike | hCoV-19/Iran/K1r-64/2020 | T | 500 | P | 1 | 20200325 |
| EPI_ISL_766219 | Spike | hCoV-19/England/205261952/2020 | N | 501 | Y | 31568 (geo) | 20200000 |
| EPI_ISL_491111 | Spike | hCoV-19/Germany/MV-Tv4-20-Tier-4/2020 | N | 501 | T | 421 (geo) | 20200000 |
| EPI_ISL_528950 | Spike | hCoV-19/England/20166019404/2020 | N | 501 | S | 12 (geo) | 20200414 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | N | 501 | R | 1 | 20200300 |
| EPI_ISL_788656 | Spike | hCoV-19/USA/TX-HMH-MCoV-13531/2020 | N | 501 | I | 4 (geo) | 20200821 |
| EPI_ISL_823714 | Spike | hCoV-19/Wales/PHWC-4AD405/2020 | N | 501 | H | 1 | 20201222 |
| EPI_ISL_541732 | Spike | hCoV-19/India/MH-NIV-60205/2020 | G | 502 | R | 1 | 20200612 |
| EPI_ISL_813974 | Spike | hCoV-19/Malta/MDxMDH28/2020 | G | 502 | S | 1 | 20201221 |
| EPI_ISL_466306 | Spike | hCoV-19/England/20156036504/2020 | G | 502 | C | 1 | 20200408 |
| EPI_ISL_848616 | Spike | hCoV-19/Brazil/RR-IEC176337/2020 | G | 502 | V | 1 | 20200428 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | G | 502 | Y | 1 | 20200712 |
| EPI_ISL_465400 | Spike | hCoV-19/England/20174040004/2020 | G | 502 | D | 1 | 20200417 |
| EPI_ISL_568482 | Spike | hCoV-19/Iran/K1r-1/2020 | V | 503 | L | 2 (geo) | 20200322 |
| EPI_ISL_637216 | Spike | hCoV-19/Gibraltar/204641747/2020 | V | 503 | F | 20 (geo) | 20200000 |
| EPI_ISL_489589 | Spike | hCoV-19/Scotland/GCVR-171485/2020 | V | 503 | I | 2 (geo) | 20200328 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | V | 503 | K | 1 | 20200712 |
| EPI_ISL_872504 | Spike | hCoV-19/USA/NM-UNM-01758/2021 | V | 503 | A | 1 | 20210111 |
| EPI_ISL_765124 | Spike | hCoV-19/England/PORT-2D5679/2020 | G | 504 | S | 1 | 20201220 |
| EPI_ISL_469001 | Spike | hCoV-19/Spain/IB-IBV-2512/2020 | G | 504 | D | 5 (geo) | 20200320 |
| EPI_ISL_542366 | Spike | hCoV-19/Italy/LOM-UniMI-L448/2020 | G | 504 | N | 1 | 20200318 |
| EPI_ISL_454535 | Spike | hCoV-19/India/MH-NIV-5097/2020 | G | 504 | V | 1 | 20200326 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | G | 504 | L | 1 | 20200712 |
| EPI_ISL_784826 | Spike | hCoV-19/USA/TX-HMH-MCoV-18478/2020 | G | 504 | Y | 1 | 20201120 |
| EPI_ISL_465212 | Spike | hCoV-19/England/20169021604/2020 | Y | 505 | H | 4 (geo) | 20200417 |
| EPI_ISL_570174 | Spike | hCoV-19/USA/WA-UW-7188/2020 | Y | 505 | W | 19 (geo) | 20200413 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | Y | 505 | E | 1 | 20200228 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | Y | 505 | P | 1 | 20200712 |
| EPI_ISL_570174 | Spike | hCoV-19/USA/WA-UW-7188/2020 | Q | 506 | K | 16 (geo) | 20200413 |
| EPI_ISL_856714 | Spike | hCoV-19/Italy/VEN-PD03/2020 | Q | 506 | P | 3 (geo) | 20200305 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | Q | 506 | D | 1 | 20200712 |
| EPI_ISL_475043 | Spike | hCoV-19/India/GJ-GBRC213a/2020 | Q | 506 | H | 2 (geo) | 20200611 |
| EPI_ISL_812785 | Spike | hCoV-19/Egypt/CCHE57357-A-03/2020 | P | 507 | S | 5 (geo) | 20200514 |
| EPI_ISL_475044 | Spike | hCoV-19/India/GJ-GBRC213b/2020 | P | 507 | H | 1 | 20200611 |
| EPI_ISL_738314 | Spike | hCoV-19/Norway/7129/2020 | P | 507 | A | 10 (geo) | 20201213 |
| EPI_ISL_787186 | Spike | hCoV-19/USA/TX-HMH-MCoV-13894/2020 | P | 507 | L | 2 (geo) | 20200817 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | P | 507 | D | 1 | 20200712 |
| EPI_ISL_636586 | Spike | hCoV-19/Netherlands/ZE-RIVM-10352/2020 | Y | 508 | H | 68 (geo) | 20200000 |
| EPI_ISL_475043 | Spike | hCoV-19/India/GJ-GBRC213a/2020 | Y | 508 | N | 2 (geo) | 20200611 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | Y | 508 | F | 1 | 20200712 |
| EPI_ISL_568495 | Spike | hCoV-19/Iran/K1r-29/2020 | Y | 508 | S | 2 (geo) | 20200220 |
| EPI_ISL_419222 | Spike | hCoV-19/Hong Kong/HKPU48-0202/2020 | R | 509 | K | 4 (geo) | 20200211 |
| EPI_ISL_568483 | Spike | hCoV-19/Iran/K1r-4/2020 | R | 509 | T | 2 (geo) | 20200322 |
| EPI_ISL_419222 | Spike | hCoV-19/Hong Kong/HKPU48-0202/2020 | V | 510 | L | 2 (geo) | 20200211 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | V | 510 | G | 1 | 20200712 |
| EPI_ISL_568488 | Spike | hCoV-19/Iran/K1r-19/2020 | V | 510 | E | 3 (geo) | 20200322 |
| EPI_ISL_672597 | Spike | hCoV-19/Iran/SA-Isf-45/2020 | V | 510 | I | 1 | 20200615 |
| EPI_ISL_591060 | Spike | hCoV-19/Iran/SA-Isf-20/2020 | V | 511 | I | 2 (geo) | 20200411 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | V | 511 | E | 3 (geo) | 20200300 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | V | 511 | C | 1 | 20200712 |
| EPI_ISL_785804 | Spike | hCoV-19/USA/TX-HMH-MCoV-16120/2020 | V | 511 | L | 1 | 20201028 |
| EPI_ISL_795836 | Spike | hCoV-19/Denmark/DCGC-24961/2020 | V | 512 | I | 2 (geo) | 20201228 |
| EPI_ISL_596382 | Spike | hCoV-19/Iran/K1r-114/2020 | V | 512 | L | 3 (geo) | 20200500 |
| EPI_ISL_613961 | Spike | hCoV-19/Brazil/SP-RP1/2020 | V | 512 | A | 1 | 20200322 |
| EPI_ISL_591059 | Spike | hCoV-19/Iran/SA-Isf-22/2020 | V | 512 | E | 1 | 20200805 |
| EPI_ISL_857200 | Spike | hCoV-19/USA/NY-NYCPHL-002130/2021 | L | 513 | I | 1 | 20210104 |
| EPI_ISL_525021 | Spike | hCoV-19/USA/UT-UPHL-2008915/2020 | L | 513 | F | 7 (geo) | 20200518 |
| EPI_ISL_525470 | Spike | hCoV-19/Dominican Republic/ICGEB_UNIBE032.8/2020 | L | 513 | R | 2 (geo) | 20200506 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | S | 514 | P | 1 | 20200300 |
| EPI_ISL_590830 | Spike | hCoV-19/Switzerland/ZH-UZH-IMV8/2020 | S | 514 | F | 17 (geo) | 20200330 |
| EPI_ISL_492013 | Spike | hCoV-19/Oman/205040276/2020 | S | 514 | Y | 1 | 20200531 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | S | 514 | A | 1 | 20200228 |
| EPI_ISL_511750 | Spike | hCoV-19/Portugal/PT1207/2020 | F | 515 | L | 4 (geo) | 20200330 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | F | 515 | V | 1 | 20200228 |
| EPI_ISL_418652 | Spike | hCoV-19/Belgium/ULG-9641/2020 | E | 516 | Q | 22 (geo) | 20200322 |
| EPI_ISL_767841 | Spike | hCoV-19/Iran/K1r-140/2020 | E | 516 | D | 2 (geo) | 20200600 |
| EPI_ISL_618658 | Spike | hCoV-19/Denmark/DCGC-1553/2020 | E | 516 | K | 1 | 20200413 |
| EPI_ISL_448347 | Spike | hCoV-19/England/NORW-E99F3/2020 | E | 516 | V | 1 | 20200423 |
| EPI_ISL_646549 | Spike | hCoV-19/England/ALDP-B25037/2020 | E | 516 | G | 2 (geo) | 20201104 |
| EPI_ISL_605076 | Spike | hCoV-19/Ireland/WW-NVRL-20G41355/2020 | L | 517 | F | 18 (geo) | 20200324 |
| EPI_ISL_628128 | Spike | hCoV-19/Wales/PHWC-484F6D/2020 | L | 517 | I | 3 (geo) | 20201016 |
| EPI_ISL_672599 | Spike | hCoV-19/Iran/SA-Isf-47/2020 | L | 517 | P | 2 (geo) | 20200624 |
| EPI_ISL_828433 | Spike | hCoV-19/Iceland/4742/2020 | L | 517 | V | 1 | 20201028 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | L | 518 | A | 4 (geo) | 20200310 |
| EPI_ISL_529206 | Spike | hCoV-19/USA/UT-UPHL-01685/2020 | L | 518 | I | 4 (geo) | 20200413 |
| EPI_ISL_646859 | Spike | hCoV-19/England/ALDP-B2440F/2020 | L | 518 | S | 1 | 20201104 |
| EPI_ISL_693575 | Spike | hCoV-19/Portugal/PT1565/2020 | L | 518 | Q | 1 | 20200627 |
| EPI_ISL_861696 | Spike | hCoV-19/USA/CA-LACPHL-AG00011/2021 | L | 518 | V | 1 | 20210103 |
| EPI_ISL_418944 | Spike | hCoV-19/USA/WA-UW378/2020 | H | 519 | Q | 5 (geo) | 20200315 |
| EPI_ISL_568498 | Spike | hCoV-19/Iran/K1r-64/2020 | H | 519 | N | 2 (geo) | 20200325 |
| EPI_ISL_672600 | Spike | hCoV-19/Iran/SA-Isf-48/2020 | H | 519 | Y | 3 (geo) | 20200624 |
| EPI_ISL_452352 | Spike | hCoV-19/Beijing/DT-travelIT01/2020 | H | 519 | P | 7 (geo) | 20200305 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | H | 519 | I | 1 | 20200300 |
| EPI_ISL_788656 | Spike | hCoV-19/USA/TX-HMH-MCoV-13531/2020 | H | 519 | L | 1 | 20200821 |
| EPI_ISL_430174 | Spike | hCoV-19/USA/WA-S137/2020 | A | 520 | S | 712 (geo) | 20200313 |
| EPI_ISL_783577 | Spike | hCoV-19/USA/TX-HMH-MCoV-8387/2020 | - | 520 | P | 52 (geo) | 20200624 |
| EPI_ISL_780514 | Spike | hCoV-19/USA/TX-HMH-MCoV-8690/2020 | - | 520 | H | 2 (geo) | 20200702 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | A | 520 | I | 4 (geo) | 20200310 |
| EPI_ISL_529206 | Spike | hCoV-19/USA/UT-UPHL-01685/2020 | A | 520 | E | 2 (geo) | 20200413 |
| EPI_ISL_444513 | Spike | hCoV-19/Canada/QC_AD3/2020 | A | 520 | V | 8 (geo) | 20200406 |
| EPI_ISL_780442 | Spike | hCoV-19/USA/TX-HMH-MCoV-8546/2020 | - | 520 | A | 17 (geo) | 20200701 |
| EPI_ISL_427104 | Spike | hCoV-19/Australia/VIC844/2020 | A | 520 | T | 2 (geo) | 20200404 |
| EPI_ISL_649100 | Spike | hCoV-19/Israel/CVL-n2487/2020 | P | 521 | R | 34 (geo) | 20200307 |
| EPI_ISL_537409 | Spike | hCoV-19/Spain/RI-IBV-99005866/2020 | P | 521 | L | 6 (geo) | 20200305 |
| EPI_ISL_678324 | Spike | hCoV-19/Australia/NSW2627/2020 | P | 521 | S | 25 (geo) | 20200407 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | P | 521 | Q | 2 (geo) | 20200228 |
| EPI_ISL_539551 | Spike | hCoV-19/Spain/CT-ISCIII-202050/2020 | P | 521 | T | 2 (geo) | 20200301 |
| EPI_ISL_457399 | Spike | hCoV-19/England/NORW-EAF87/2020 | P | 521 | D | 2 (geo) | 20200429 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | P | 521 | V | 1 | 20200712 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | P | 521 | I | 1 | 20200628 |
| EPI_ISL_775912 | Spike | hCoV-19/Germany/HH-hpi-p1459/2020 | A | 522 | V | 241 (geo) | 20200311 |
| EPI_ISL_579261 | Spike | hCoV-19/New Zealand/20VR2507/2020 | A | 522 | S | 272 (geo) | 20200000 |
| EPI_ISL_788834 | Spike | hCoV-19/USA/TX-HMH-MCoV-13741/2020 | A | 522 | E | 3 (geo) | 20200817 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | A | 522 | P | 11 (geo) | 20200300 |
| EPI_ISL_536764 | Spike | hCoV-19/USA/WI-UW-1393/2020 | A | 522 | G | 3 (geo) | 20200904 |
| EPI_ISL_582004 | Spike | hCoV-19/Iran/SA-Isf-13/2020 | A | 522 | T | 2 (geo) | 20200410 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | A | 522 | I | 1 | 20200712 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | A | 522 | Y | 1 | 20200628 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | T | 523 | A | 7 (geo) | 20200712 |
| EPI_ISL_667709 | Spike | hCoV-19/Japan/IC-0280/2020 | T | 523 | I | 3 (geo) | 20201100 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | T | 523 | P | 1 | 20200300 |
| EPI_ISL_451148 | Spike | hCoV-19/Australia/SAP154/2020 | T | 523 | N | 5 (geo) | 20200323 |
| EPI_ISL_457399 | Spike | hCoV-19/England/NORW-EAF87/2020 | T | 523 | K | 2 (geo) | 20200429 |
| EPI_ISL_522095 | Spike | hCoV-19/Australia/VIC2375/2020 | T | 523 | Q | 1 | 20200628 |
| EPI_ISL_604629 | Spike | hCoV-19/USA/CA-QDX-2318/2020 | V | 524 | L | 2 (geo) | 20200316 |
| EPI_ISL_599228 | Spike | hCoV-19/England/QEUH-A0C34D/2020 | V | 524 | G | 1 | 20201003 |
| EPI_ISL_620406 | Spike | hCoV-19/South Korea/YeungNam/2020 | V | 524 | D | 1 | 20200707 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | V | 524 | W | 1 | 20200712 |
| EPI_ISL_568495 | Spike | hCoV-19/Iran/K1r-29/2020 | C | 525 | W | 8 (geo) | 20200220 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | C | 525 | N | 1 | 20200712 |
| EPI_ISL_519276 | Spike | hCoV-19/Australia/VIC4898/2020 | G | 526 | S | 1 | 20200712 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | P | 527 | T | 3 (geo) | 20200300 |
| EPI_ISL_802697 | Spike | hCoV-19/USA/IN-CDC-STM-063/2020 | P | 527 | S | 1 | 20201224 |
| EPI_ISL_786506 | Spike | hCoV-19/USA/TX-HMH-MCoV-15022/2020 | P | 527 | L | 2 (geo) | 20201016 |
| EPI_ISL_644872 | Spike | hCoV-19/USA/VA-DCLS-1786/2020 | K | 528 | I | 1 | 20200916 |
| EPI_ISL_542839 | Spike | hCoV-19/USA/TX-HMH-1788/2020 | K | 528 | R | 5 (geo) | 20200512 |
| EPI_ISL_562433 | Spike | hCoV-19/Australia/VIC8151/2020 | K | 528 | N | 1 | 20200806 |
| EPI_ISL_577937 | Spike | hCoV-19/Netherlands/ZH-EMC-508/2020 | K | 528 | E | 1 | 20200826 |
| EPI_ISL_488411 | Spike | hCoV-19/England/BRIS-12F4FF/2020 | K | 529 | M | 10 (geo) | 20200412 |
| EPI_ISL_454393 | Spike | hCoV-19/USA/PA-MGEL119/2020 | K | 529 | R | 47 (geo) | 20200000 |
| EPI_ISL_447591 | Spike | hCoV-19/Taiwan/TSGH-32/2020 | K | 529 | N | 8 (geo) | 20200320 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | K | 529 | S | 1 | 20200406 |
| EPI_ISL_427189 | Spike | hCoV-19/USA/WA-UW-3839/2020 | K | 529 | E | 1 | 20200326 |
| EPI_ISL_591320 | Spike | hCoV-19/Iran/K1r-112/2020 | K | 529 | I | 1 | 20200500 |
| EPI_ISL_460424 | Spike | hCoV-19/USA/MA-MGH-00556/2020 | K | 529 | T | 1 | 20200321 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | S | 530 | L | 1 | 20200406 |
| EPI_ISL_514298 | Spike | hCoV-19/Israel/CVL-n26400/2020 | S | 530 | P | 1 | 20200721 |
| EPI_ISL_568479 | Spike | hCoV-19/Iran/K1r-76/2020 | S | 530 | F | 1 | 20200427 |
| EPI_ISL_548947 | Spike | hCoV-19/Iran/K1r-3/2020 | S | 530 | T | 2 (geo) | 20200320 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | T | 531 | L | 1 | 20200406 |
| EPI_ISL_514298 | Spike | hCoV-19/Israel/CVL-n26400/2020 | T | 531 | A | 1 | 20200721 |
| EPI_ISL_568479 | Spike | hCoV-19/Iran/K1r-76/2020 | T | 531 | N | 1 | 20200427 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | N | 532 | I | 3 (geo) | 20200406 |
| EPI_ISL_745850 | Spike | hCoV-19/USA/UT-UPHL-2012671868/2020 | N | 532 | S | 5 (geo) | 20200810 |
| EPI_ISL_514298 | Spike | hCoV-19/Israel/CVL-n26400/2020 | N | 532 | T | 1 | 20200721 |
| EPI_ISL_725610 | Spike | hCoV-19/England/NOTT-1203B5/2020 | N | 532 | D | 1 | 20201208 |
| EPI_ISL_568495 | Spike | hCoV-19/Iran/K1r-29/2020 | N | 532 | Y | 2 (geo) | 20200220 |
| EPI_ISL_475586 | Spike | hCoV-19/USA/CA-CSMC110/2020 | N | 532 | K | 1 | 20200322 |
| EPI_ISL_479128 | Spike | hCoV-19/England/OXON-B2207/2020 | L | 533 | V | 2 (geo) | 20200420 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | L | 533 | W | 1 | 20200406 |
| EPI_ISL_548947 | Spike | hCoV-19/Iran/K1r-3/2020 | L | 533 | K | 2 (geo) | 20200320 |
| EPI_ISL_568483 | Spike | hCoV-19/Iran/K1r-4/2020 | V | 534 | G | 2 (geo) | 20200322 |
| EPI_ISL_459955 | Spike | hCoV-19/Malaysia/IMR_WC2665/2020 | V | 534 | I | 22 (geo) | 20200318 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | V | 534 | L | 3 (geo) | 20200406 |
| EPI_ISL_618315 | Spike | hCoV-19/Denmark/DCGC-2080/2020 | V | 534 | F | 7 (geo) | 20200713 |
| EPI_ISL_514312 | Spike | hCoV-19/Israel/CVL-n14276/2020 | K | 535 | L | 2 (geo) | 20200321 |
| EPI_ISL_568496 | Spike | hCoV-19/Iran/K1r-32/2020 | K | 535 | V | 2 (geo) | 20200224 |
| EPI_ISL_568509 | Spike | hCoV-19/Iran/K1r-126/2020 | K | 535 | I | 1 | 20200427 |
| EPI_ISL_733174 | Spike | hCoV-19/Russia/AST-RII-MH4150S/2020 | K | 535 | R | 1 | 20200813 |
| EPI_ISL_684691 | Spike | hCoV-19/Japan/PG-1081/2020 | N | 536 | K | 6 (geo) | 20200400 |
| EPI_ISL_638726 | Spike | hCoV-19/England/QEUH-A370BB/2020 | N | 536 | S | 15 (geo) | 20201003 |
| EPI_ISL_618962 | Spike | hCoV-19/Denmark/DCGC-1634/2020 | N | 536 | T | 3 (geo) | 20200406 |
| EPI_ISL_679048 | Spike | hCoV-19/England/BIRM-6A392/2020 | N | 536 | D | 1 | 20201109 |
| EPI_ISL_681636 | Spike | hCoV-19/England/MILK-BA9A6A/2020 | N | 536 | H | 1 | 20201117 |
| EPI_ISL_600463 | Spike | hCoV-19/Bangladesh/G-119/2020 | K | 537 | N | 3 (geo) | 20200620 |
| EPI_ISL_677089 | Spike | hCoV-19/USA/NY-Wadsworth-207202-01/2020 | K | 537 | R | 6 (geo) | 20200901 |
| EPI_ISL_588199 | Spike | hCoV-19/England/QEUH-9FAC93/2020 | K | 537 | T | 1 | 20200928 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | C | 538 | M | 1 | 20200418 |
| EPI_ISL_672575 | Spike | hCoV-19/Iran/SA-Isf-12/2020 | C | 538 | W | 5 (geo) | 20200329 |
| EPI_ISL_568479 | Spike | hCoV-19/Iran/K1r-76/2020 | C | 538 | S | 1 | 20200427 |
| EPI_ISL_600463 | Spike | hCoV-19/Bangladesh/G-119/2020 | C | 538 | V | 1 | 20200620 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | V | 539 | C | 1 | 20200418 |
| EPI_ISL_649427 | Spike | hCoV-19/England/ALDP-B49088/2020 | V | 539 | I | 25 (geo) | 20201107 |
| EPI_ISL_568479 | Spike | hCoV-19/Iran/K1r-76/2020 | V | 539 | F | 2 (geo) | 20200427 |
| EPI_ISL_799732 | Spike | hCoV-19/England/ALDP-CE1BDB/2020 | V | 539 | L | 1 | 20201224 |
| EPI_ISL_600463 | Spike | hCoV-19/Bangladesh/G-119/2020 | V | 539 | S | 1 | 20200620 |
| EPI_ISL_568495 | Spike | hCoV-19/Iran/K1r-29/2020 | V | 539 | G | 1 | 20200220 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | N | 540 | Q | 1 | 20200418 |
| EPI_ISL_660117 | Spike | hCoV-19/Iran/SA-Isf-9/2020 | N | 540 | H | 25 (geo) | 20200418 |
| EPI_ISL_671209 | Spike | hCoV-19/Denmark/DCGC-11904/2020 | N | 540 | D | 7 (geo) | 20201026 |
| EPI_ISL_672577 | Spike | hCoV-19/Iran/SA-Isf-24/2020 | N | 540 | I | 3 (geo) | 20200606 |
| EPI_ISL_700321 | Spike | hCoV-19/India/MH-ACTREC-696/2020 | N | 540 | S | 5 (geo) | 20200925 |
| EPI_ISL_568488 | Spike | hCoV-19/Iran/K1r-19/2020 | N | 540 | K | 1 | 20200322 |
| EPI_ISL_600463 | Spike | hCoV-19/Bangladesh/G-119/2020 | F | 541 | S | 3 (geo) | 20200620 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | N | 542 | Q | 1 | 20200418 |
| EPI_ISL_600463 | Spike | hCoV-19/Bangladesh/G-119/2020 | N | 542 | T | 3 (geo) | 20200620 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | F | 543 | L | 2 (geo) | 20200418 |
| EPI_ISL_745376 | Spike | hCoV-19/France/ARA-117764/2020 | F | 543 | I | 2 (geo) | 20201209 |
| EPI_ISL_600463 | Spike | hCoV-19/Bangladesh/G-119/2020 | F | 543 | S | 2 (geo) | 20200620 |
| EPI_ISL_754799 | Spike | hCoV-19/USA/NY-Wadsworth-252069-01/2020 | F | 543 | V | 1 | 20201022 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | N | 544 | Q | 1 | 20200418 |
| EPI_ISL_672577 | Spike | hCoV-19/Iran/SA-Isf-24/2020 | N | 544 | C | 2 (geo) | 20200606 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | N | 544 | T | 2 (geo) | 20200510 |
| EPI_ISL_767841 | Spike | hCoV-19/Iran/K1r-140/2020 | N | 544 | Y | 3 (geo) | 20200600 |
| EPI_ISL_600463 | Spike | hCoV-19/Bangladesh/G-119/2020 | N | 544 | M | 2 (geo) | 20200620 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | G | 545 | W | 1 | 20200418 |
| EPI_ISL_672577 | Spike | hCoV-19/Iran/SA-Isf-24/2020 | G | 545 | V | 4 (geo) | 20200606 |
| EPI_ISL_495993 | Spike | hCoV-19/USA/WA-S1567/2020 | G | 545 | S | 1 | 20200526 |
| EPI_ISL_787110 | Spike | hCoV-19/USA/TX-HMH-MCoV-13817/2020 | G | 545 | C | 1 | 20200817 |
| EPI_ISL_827736 | Spike | hCoV-19/Iceland/4040/2020 | G | 545 | A | 1 | 20201029 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | L | 546 | F | 1 | 20200418 |
| EPI_ISL_864545 | Spike | hCoV-19/Germany/ST-MD119/2020 | T | 547 | I | 140 (geo) | 20200000 |
| EPI_ISL_440715 | Spike | hCoV-19/England/BRIS-122C30/2020 | T | 547 | K | 72 (geo) | 20200402 |
| EPI_ISL_624666 | Spike | hCoV-19/England/ALDP-A952B5/2020 | T | 547 | A | 2 (geo) | 20201020 |
| EPI_ISL_418738 | Spike | hCoV-19/England/20124100602/2020 | T | 547 | Q | 2 (geo) | 20200317 |
| EPI_ISL_820706 | Spike | hCoV-19/England/MILK-EB6AD0/2021 | G | 548 | D | 1 | 20210102 |
| EPI_ISL_418738 | Spike | hCoV-19/England/20124100602/2020 | G | 548 | A | 2 (geo) | 20200317 |
| EPI_ISL_785774 | Spike | hCoV-19/USA/TX-HMH-MCoV-16090/2020 | G | 548 | C | 1 | 20201027 |
| EPI_ISL_422312 | Spike | hCoV-19/Wales/PHWC-26505/2020 | T | 549 | I | 21 (geo) | 20200328 |
| EPI_ISL_559410 | Spike | hCoV-19/England/ALDP-4A29A7/2020 | T | 549 | A | 80 (geo) | 20200522 |
| EPI_ISL_418738 | Spike | hCoV-19/England/20124100602/2020 | T | 549 | Q | 2 (geo) | 20200317 |
| EPI_ISL_672586 | Spike | hCoV-19/Iran/SA-Isf-34/2020 | G | 550 | C | 4 (geo) | 20200519 |
| EPI_ISL_418738 | Spike | hCoV-19/England/20124100602/2020 | G | 550 | V | 2 (geo) | 20200317 |
| EPI_ISL_804888 | Spike | hCoV-19/USA/DC-DFS-PHL-0013/2020 | G | 550 | D | 1 | 20200317 |
| EPI_ISL_645040 | Spike | hCoV-19/Poland/PL_MCB_41/2020 | V | 551 | I | 19 (geo) | 20200428 |
| EPI_ISL_418738 | Spike | hCoV-19/England/20124100602/2020 | V | 551 | F | 10 (geo) | 20200317 |
| EPI_ISL_842001 | Spike | hCoV-19/England/PORT-2E47DE/2020 | L | 552 | F | 30 (geo) | 20200000 |
| EPI_ISL_672590 | Spike | hCoV-19/Iran/SA-Isf-38/2020 | L | 552 | P | 3 (geo) | 20200610 |
| EPI_ISL_759174 | Spike | hCoV-19/Denmark/DCGC-20476/2020 | L | 552 | I | 3 (geo) | 20201221 |
| EPI_ISL_454989 | Spike | hCoV-19/Wuhan/HB-WHCM-104/2020 | T | 553 | I | 45 (geo) | 20200302 |
| EPI_ISL_784419 | Spike | hCoV-19/USA/TX-HMH-MCoV-18071/2020 | T | 553 | A | 4 (geo) | 20201112 |
| EPI_ISL_622540 | Spike | hCoV-19/Denmark/DCGC-1875/2020 | T | 553 | S | 10 (geo) | 20200504 |
| EPI_ISL_447733 | Spike | hCoV-19/France/IDF-40002VJ/2020 | T | 553 | N | 2 (geo) | 20200300 |
| EPI_ISL_418738 | Spike | hCoV-19/England/20124100602/2020 | T | 553 | L | 2 (geo) | 20200317 |
| EPI_ISL_524430 | Spike | hCoV-19/USA/NC-200414/2020 | E | 554 | D | 106 (geo) | 20200324 |
| EPI_ISL_614820 | Spike | hCoV-19/Denmark/DCGC-856/2020 | E | 554 | V | 7 (geo) | 20200518 |
| EPI_ISL_466615 | Spike | hCoV-19/England/20168037604/2020 | E | 554 | G | 13 (geo) | 20200216 |
| EPI_ISL_508156 | Spike | hCoV-19/India/UT-AR1/2020 | E | 554 | Q | 14 (geo) | 20200601 |
| EPI_ISL_510548 | Spike | hCoV-19/South Korea/KCDC2209/2020 | E | 554 | K | 6 (geo) | 20200413 |
| EPI_ISL_418738 | Spike | hCoV-19/England/20124100602/2020 | E | 554 | S | 2 (geo) | 20200317 |
| EPI_ISL_476173 | Spike | hCoV-19/Brazil/SP-L10-CD143/2020 | E | 554 | A | 4 (geo) | 20200313 |
| EPI_ISL_418738 | Spike | hCoV-19/England/20124100602/2020 | S | 555 | L | 2 (geo) | 20200317 |
| EPI_ISL_568479 | Spike | hCoV-19/Iran/K1r-76/2020 | S | 555 | F | 1 | 20200427 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | S | 555 | A | 2 (geo) | 20200511 |
| EPI_ISL_790520 | Spike | hCoV-19/USA/TX-HMH-MCoV-12782/2020 | S | 555 | Y | 1 | 20200819 |
| EPI_ISL_468225 | Spike | hCoV-19/Switzerland/BS-ETHZ-120035/2020 | N | 556 | K | 15 (geo) | 20200419 |
| EPI_ISL_614518 | Spike | hCoV-19/Denmark/DCGC-950/2020 | N | 556 | D | 4 (geo) | 20200330 |
| EPI_ISL_610844 | Spike | hCoV-19/England/CAMC-A83029/2020 | N | 556 | Y | 1 | 20201013 |
| EPI_ISL_445292 | Spike | hCoV-19/Chile/MA-ISPCH-11/2020 | N | 556 | S | 4 (geo) | 20200322 |
| EPI_ISL_418738 | Spike | hCoV-19/England/20124100602/2020 | N | 556 | T | 2 (geo) | 20200317 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | N | 556 | Q | 2 (geo) | 20200511 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | K | 557 | N | 1 | 20200408 |
| EPI_ISL_591063 | Spike | hCoV-19/Iran/SA-Isf-8/2020 | K | 557 | R | 1 | 20200510 |
| EPI_ISL_448661 | Spike | hCoV-19/England/OXON-AE0B9/2020 | K | 558 | N | 209 (geo) | 20200000 |
| EPI_ISL_447611 | Spike | hCoV-19/Germany/HE-FFM5clin/2020 | K | 558 | R | 10 (geo) | 20200200 |
| EPI_ISL_475629 | Spike | hCoV-19/USA/CA-CSMC2/2020 | K | 558 | Q | 3 (geo) | 20200327 |
| EPI_ISL_568545 | Spike | hCoV-19/Peru/LIM-UPCH-0151/2020 | K | 558 | M | 2 (geo) | 20200828 |
| EPI_ISL_605298 | Spike | hCoV-19/USA/UT-UPHL-2009621/2020 | K | 558 | E | 2 (geo) | 20200718 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | K | 558 | S | 3 (geo) | 20200511 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | F | 559 | L | 2 (geo) | 20200511 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | L | 560 | C | 2 (geo) | 20200621 |
| EPI_ISL_541877 | Spike | hCoV-19/Lithuania/MR-LUHS-Eilnr95/2020 | L | 560 | M | 1 | 20200418 |
| EPI_ISL_812869 | Spike | hCoV-19/Egypt/CCHE57357-P-39/2020 | L | 560 | Q | 2 (geo) | 20200728 |
| EPI_ISL_779752 | Spike | hCoV-19/Spain/MD-IBV-97010098/2020 | P | 561 | S | 56 (geo) | 20200323 |
| EPI_ISL_419799 | Spike | hCoV-19/Australia/VIC83/2020 | P | 561 | L | 12 (geo) | 20200314 |
| EPI_ISL_514137 | Spike | hCoV-19/Brazil/RO-07/2020 | P | 561 | H | 6 (geo) | 20200505 |
| EPI_ISL_802310 | Spike | hCoV-19/USA/NY-MSHSPSP-PV19350/2020 | P | 561 | T | 3 (geo) | 20200930 |
| EPI_ISL_853418 | Spike | hCoV-19/USA/CA-CZB-15616/2020 | P | 561 | R | 1 | 20201202 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | F | 562 | S | 2 (geo) | 20200621 |
| EPI_ISL_755305 | Spike | hCoV-19/Chile/RM-0807-052/2020 | F | 562 | L | 2 (geo) | 20200707 |
| EPI_ISL_482730 | Spike | hCoV-19/South Africa/KRISP-0260/2020 | F | 562 | Y | 1 | 20200615 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | Q | 563 | N | 2 (geo) | 20200621 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | Q | 563 | M | 2 (geo) | 20200511 |
| EPI_ISL_707948 | Spike | hCoV-19/Germany/SL-SU-10427348/2020 | Q | 563 | H | 1 | 20200314 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | Q | 564 | N | 2 (geo) | 20200621 |
| EPI_ISL_687033 | Spike | hCoV-19/Japan/PG-7932/2020 | Q | 564 | H | 2 (geo) | 20200700 |
| EPI_ISL_520051 | Spike | hCoV-19/Australia/VIC5287/2020 | Q | 564 | L | 1 | 20200717 |
| EPI_ISL_536564 | Spike | hCoV-19/Peru/LAM-INS-171/2020 | F | 565 | L | 89 (geo) | 20200401 |
| EPI_ISL_455105 | Spike | hCoV-19/Sweden/20-51317/2020 | F | 565 | V | 3 (geo) | 20200507 |
| EPI_ISL_853895 | Spike | hCoV-19/Austria/CeMM1346/2020 | F | 565 | S | 3 (geo) | 20200805 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | F | 565 | I | 1 | 20200511 |
| EPI_ISL_518622 | Spike | hCoV-19/Australia/VIC5828/2020 | G | 566 | S | 19 (geo) | 20200722 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | G | 566 | A | 2 (geo) | 20200621 |
| EPI_ISL_819296 | Spike | hCoV-19/Spain/CT-HUVH-93711/2020 | G | 566 | V | 1 | 20200529 |
| EPI_ISL_461213 | Spike | hCoV-19/Netherlands/NoordHolland_23/2020 | R | 567 | K | 52 (geo) | 20200506 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | R | 567 | E | 2 (geo) | 20200621 |
| EPI_ISL_588703 | Spike | hCoV-19/England/QEUH-9F3BCA/2020 | R | 567 | S | 2 (geo) | 20200924 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | D | 568 | T | 2 (geo) | 20200621 |
| EPI_ISL_591316 | Spike | hCoV-19/Iran/K1r-63/2020 | D | 568 | H | 2 (geo) | 20200400 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | D | 568 | N | 4 (geo) | 20200300 |
| EPI_ISL_583018 | Spike | hCoV-19/USA/CA-CZB-10290/2020 | I | 569 | T | 13 (geo) | 20200908 |
| EPI_ISL_682325 | Spike | hCoV-19/South Africa/UFS-VIRO-NGS-12/2020 | I | 569 | F | 3 (geo) | 20201015 |
| EPI_ISL_463059 | Spike | hCoV-19/India/OR-ILSCV18287/2020 | I | 569 | V | 4 (geo) | 20200513 |
| EPI_ISL_730043 | Spike | hCoV-19/Nigeria/LA-CV390/2020 | I | 569 | L | 5 (geo) | 20200615 |
| EPI_ISL_605890 | Spike | hCoV-19/Bangladesh/DNAS-CPH-isl-479/2020 | I | 569 | S | 2 (geo) | 20200429 |
| EPI_ISL_568479 | Spike | hCoV-19/Iran/K1r-76/2020 | I | 569 | N | 2 (geo) | 20200427 |
| EPI_ISL_766219 | Spike | hCoV-19/England/205261952/2020 | A | 570 | D | 30529 (geo) | 20200000 |
| EPI_ISL_523330 | Spike | hCoV-19/Netherlands/NB-EMC-207/2020 | A | 570 | V | 91 (geo) | 20200000 |
| EPI_ISL_538977 | Spike | hCoV-19/England/LEED-2A9F64/2020 | A | 570 | S | 45 (geo) | 20200409 |
| EPI_ISL_427632 | Spike | hCoV-19/USA/NY-NYUMC232/2020 | A | 570 | T | 3 (geo) | 20200406 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | A | 570 | L | 2 (geo) | 20200621 |
| EPI_ISL_731655 | Spike | hCoV-19/England/ALDP-C3AA8B/2020 | A | 570 | Y | 2 (geo) | 20201209 |
| EPI_ISL_568479 | Spike | hCoV-19/Iran/K1r-76/2020 | A | 570 | G | 1 | 20200427 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | D | 571 | T | 2 (geo) | 20200621 |
| EPI_ISL_458223 | Spike | hCoV-19/Belgium/Rega-0330253/2020 | D | 571 | E | 2 (geo) | 20200330 |
| EPI_ISL_785035 | Spike | hCoV-19/USA/TX-HMH-MCoV-18687/2020 | D | 571 | H | 1 | 20201120 |
| EPI_ISL_679225 | Spike | hCoV-19/England/CAMB-1BBD39/2020 | T | 572 | I | 526 (geo) | 20200000 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | T | 572 | L | 2 (geo) | 20200621 |
| EPI_ISL_537711 | Spike | hCoV-19/Spain/CN-IBV-97006502/2020 | T | 572 | S | 7 (geo) | 20200328 |
| EPI_ISL_848612 | Spike | hCoV-19/Brazil/AC-IEC169737/2020 | T | 572 | N | 6 (geo) | 20200610 |
| EPI_ISL_668507 | Spike | hCoV-19/Denmark/DCGC-10135/2020 | T | 572 | A | 1 | 20201109 |
| EPI_ISL_579199 | Spike | hCoV-19/New Zealand/20VR2003/2020 | T | 573 | I | 92 (geo) | 20200000 |
| EPI_ISL_493582 | Spike | hCoV-19/England/NOTT-112AB1/2020 | T | 573 | P | 1 | 20200423 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | T | 573 | L | 2 (geo) | 20200621 |
| EPI_ISL_581571 | Spike | hCoV-19/USA/VA-DCLS-1502/2020 | T | 573 | A | 1 | 20200728 |
| EPI_ISL_473550 | Spike | hCoV-19/Scotland/CVR2730/2020 | T | 573 | N | 2 (geo) | 20200418 |
| EPI_ISL_678359 | Spike | hCoV-19/Australia/NSW2885/2020 | D | 574 | Y | 450 (geo) | 20200312 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | D | 574 | N | 8 (geo) | 20200418 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | D | 574 | M | 2 (geo) | 20200621 |
| EPI_ISL_441977 | Spike | hCoV-19/England/SHEF-C575D/2020 | D | 574 | G | 1 | 20200328 |
| EPI_ISL_511339 | Spike | hCoV-19/Portugal/PT1380/2020 | D | 574 | H | 3 (geo) | 20200326 |
| EPI_ISL_440414 | Spike | hCoV-19/England/CAMB-75385/2020 | A | 575 | S | 107 (geo) | 20200318 |
| EPI_ISL_663741 | Spike | hCoV-19/Australia/VIC17117/2020 | A | 575 | V | 1 | 20200814 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | A | 575 | R | 1 | 20200418 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | A | 575 | L | 2 (geo) | 20200621 |
| EPI_ISL_455363 | Spike | hCoV-19/Wuhan/HB-WH1-123/2020 | A | 575 | C | 1 | 20200302 |
| EPI_ISL_785878 | Spike | hCoV-19/USA/TX-HMH-MCoV-16194/2020 | A | 575 | T | 2 (geo) | 20201028 |
| EPI_ISL_568478 | Spike | hCoV-19/Iran/K1r-78/2020 | A | 575 | G | 1 | 20200427 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | V | 576 | H | 1 | 20200418 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | V | 576 | S | 1 | 20200621 |
| EPI_ISL_475540 | Spike | hCoV-19/Sweden/20-07382/2020 | V | 576 | I | 3 (geo) | 20200415 |
| EPI_ISL_735803 | Spike | hCoV-19/England/MILK-C61C94/2020 | V | 576 | A | 2 (geo) | 20201213 |
| EPI_ISL_860398 | Spike | hCoV-19/Germany/NW-KRO-081/2020 | V | 576 | L | 1 | 20200623 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | R | 577 | V | 1 | 20200621 |
| EPI_ISL_419398 | Spike | hCoV-19/Wales/PHWC-2433A/2020 | R | 577 | C | 7 (geo) | 20200318 |
| EPI_ISL_480574 | Spike | hCoV-19/Australia/VIC859/2020 | R | 577 | H | 1 | 20200405 |
| EPI_ISL_542699 | Spike | hCoV-19/USA/TX-HMH-1401/2020 | R | 577 | L | 1 | 20200430 |
| EPI_ISL_787377 | Spike | hCoV-19/USA/TX-HMH-MCoV-14091/2020 | R | 577 | S | 1 | 20200814 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | D | 578 | C | 1 | 20200418 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | D | 578 | I | 1 | 20200621 |
| EPI_ISL_787123 | Spike | hCoV-19/USA/TX-HMH-MCoV-13830/2020 | D | 578 | N | 1 | 20200817 |
| EPI_ISL_577703 | Spike | hCoV-19/India/MH-NIV-209851/2020 | D | 578 | Y | 1 | 20200913 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | P | 579 | S | 4 (geo) | 20200418 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | P | 579 | H | 1 | 20200621 |
| EPI_ISL_620406 | Spike | hCoV-19/South Korea/YeungNam/2020 | P | 579 | L | 1 | 20200707 |
| EPI_ISL_454965 | Spike | hCoV-19/Wuhan/HB-WH5-220/2020 | P | 579 | Q | 1 | 20200220 |
| EPI_ISL_478410 | Spike | hCoV-19/England/LOND-D5DD0/2020 | Q | 580 | Y | 1 | 20200418 |
| EPI_ISL_770965 | Spike | hCoV-19/Luxembourg/LNS2332603/2020 | Q | 580 | E | 1 | 20201130 |
| EPI_ISL_437143 | Spike | hCoV-19/USA/MI-MDHHS-SC20056/2020 | Q | 580 | H | 8 (geo) | 20200321 |
| EPI_ISL_453072 | Spike | hCoV-19/Scotland/CVR2732/2020 | Q | 580 | R | 6 (geo) | 20200416 |
| EPI_ISL_771211 | Spike | hCoV-19/USA/CO-CDPHE-2011196627/2020 | Q | 580 | K | 2 (geo) | 20201118 |
| EPI_ISL_468965 | Spike | hCoV-19/Spain/IB-IBV-2528/2020 | T | 581 | H | 2 (geo) | 20200321 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | T | 581 | N | 1 | 20200511 |
| EPI_ISL_583708 | Spike | hCoV-19/Austria/CeMM0802/2020 | L | 582 | F | 6 (geo) | 20200506 |
| EPI_ISL_468965 | Spike | hCoV-19/Spain/IB-IBV-2528/2020 | L | 582 | T | 1 | 20200321 |
| EPI_ISL_841941 | Spike | hCoV-19/England/PORT-2E22DF/2020 | E | 583 | D | 3035 (geo) | 20200000 |
| EPI_ISL_453370 | Spike | hCoV-19/England/LIVE-9EB42/2020 | E | 583 | Q | 162 (geo) | 20200405 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | E | 583 | A | 29 (geo) | 20200300 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | E | 583 | R | 1 | 20200621 |
| EPI_ISL_585198 | Spike | hCoV-19/Northern Ireland/NIRE-10873F/2020 | E | 583 | V | 1 | 20200913 |
| EPI_ISL_468965 | Spike | hCoV-19/Spain/IB-IBV-2528/2020 | E | 583 | H | 1 | 20200321 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | E | 583 | L | 1 | 20200511 |
| EPI_ISL_530124 | Spike | hCoV-19/USA/WA-S2767/2020 | I | 584 | V | 25 (geo) | 20200511 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | I | 584 | F | 1 | 20200621 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | I | 584 | L | 3 (geo) | 20200511 |
| EPI_ISL_524686 | Spike | hCoV-19/England/LOND-1260DB7/2020 | L | 585 | F | 61 (geo) | 20200404 |
| EPI_ISL_787123 | Spike | hCoV-19/USA/TX-HMH-MCoV-13830/2020 | L | 585 | I | 5 (geo) | 20200817 |
| EPI_ISL_856721 | Spike | hCoV-19/Italy/VEN-PD10/2020 | D | 586 | G | 2 (geo) | 20200313 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | D | 586 | T | 1 | 20200621 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | D | 586 | E | 7 (geo) | 20200300 |
| EPI_ISL_465465 | Spike | hCoV-19/England/20186006004/2020 | D | 586 | H | 1 | 20200429 |
| EPI_ISL_811723 | Spike | hCoV-19/England/CAMC-E51FD8/2021 | D | 586 | A | 1 | 20210102 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | I | 587 | L | 1 | 20200621 |
| EPI_ISL_617942 | Spike | hCoV-19/Denmark/DCGC-1347/2020 | I | 587 | V | 2 (geo) | 20200511 |
| EPI_ISL_514243 | Spike | hCoV-19/Bangladesh/BCSIR-NILMRC-386/2020 | T | 588 | S | 64 (geo) | 20200721 |
| EPI_ISL_803384 | Spike | hCoV-19/USA/WI-WSLH-201143/2020 | T | 588 | A | 2 (geo) | 20201008 |
| EPI_ISL_703191 | Spike | hCoV-19/England/ALDP-BB33DB/2020 | T | 588 | I | 2 (geo) | 20201119 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | T | 588 | H | 1 | 20200621 |
| EPI_ISL_456954 | Spike | hCoV-19/Scotland/EDB5046/2020 | P | 589 | S | 20 (geo) | 20200401 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | P | 589 | H | 1 | 20200621 |
| EPI_ISL_788835 | Spike | hCoV-19/USA/TX-HMH-MCoV-13742/2020 | P | 589 | L | 1 | 20200817 |
| EPI_ISL_493714 | Spike | hCoV-19/England/SHEF-CDB3B/2020 | P | 589 | R | 1 | 20200622 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | C | 590 | V | 1 | 20200621 |
| EPI_ISL_529762 | Spike | hCoV-19/South Africa/KRISP-K002766/2020 | S | 591 | F | 12 (geo) | 20200812 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | S | 591 | L | 1 | 20200621 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | F | 592 | S | 3 (geo) | 20200327 |
| EPI_ISL_475586 | Spike | hCoV-19/USA/CA-CSMC110/2020 | F | 592 | L | 5 (geo) | 20200322 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | G | 593 | V | 1 | 20200621 |
| EPI_ISL_424405 | Spike | hCoV-19/Iceland/381/2020 | G | 593 | C | 2 (geo) | 20200319 |
| EPI_ISL_827839 | Spike | hCoV-19/Iceland/4145/2020 | G | 593 | S | 2 (geo) | 20201102 |
| EPI_ISL_424504 | Spike | hCoV-19/Iceland/481/2020 | G | 594 | V | 3 (geo) | 20200320 |
| EPI_ISL_427784 | Spike | hCoV-19/Australia/NSW160/2020 | G | 594 | S | 9 (geo) | 20200324 |
| EPI_ISL_484795 | Spike | hCoV-19/USA/MI-UM-2006S001039/2020 | G | 594 | D | 1 | 20200407 |
| EPI_ISL_788014 | Spike | hCoV-19/USA/TX-HMH-MCoV-12861/2020 | G | 594 | C | 1 | 20200818 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | V | 595 | S | 1 | 20200621 |
| EPI_ISL_571987 | Spike | hCoV-19/USA/NY-QDX-1177/2020 | V | 595 | I | 2 (geo) | 20200313 |
| EPI_ISL_671272 | Spike | hCoV-19/Gibraltar/204841701/2020 | V | 595 | L | 1 | 20200000 |
| EPI_ISL_496186 | Spike | hCoV-19/USA/WA-S1760/2020 | S | 596 | I | 14 (geo) | 20200601 |
| EPI_ISL_728330 | Spike | hCoV-19/India/MH-BJMC-6666/2020 | S | 596 | V | 1 | 20200621 |
| EPI_ISL_545646 | Spike | hCoV-19/USA/TX-HMH-7811/2020 | S | 596 | N | 4 (geo) | 20200630 |
| EPI_ISL_445355 | Spike | hCoV-19/Chile/RM-ISPCH-59/2020 | S | 596 | R | 3 (geo) | 20200322 |
| EPI_ISL_746050 | Spike | hCoV-19/USA/UT-UPHL-2012081770/2020 | S | 596 | C | 2 (geo) | 20200731 |
| EPI_ISL_763104 | Spike | hCoV-19/Netherlands/LI-EMC-136/2020 | S | 596 | T | 1 | 20200000 |
| EPI_ISL_475595 | Spike | hCoV-19/USA/CA-CSMC119/2020 | V | 597 | L | 2 (geo) | 20200405 |
| EPI_ISL_797359 | Spike | hCoV-19/England/MILK-DAAF95/2020 | V | 597 | I | 1 | 20201228 |
| EPI_ISL_571259 | Spike | hCoV-19/USA/WI-QDX-439/2020 | I | 598 | V | 4 (geo) | 20200318 |
| EPI_ISL_784909 | Spike | hCoV-19/USA/TX-HMH-MCoV-18561/2020 | I | 598 | L | 1 | 20201120 |
| EPI_ISL_860523 | Spike | hCoV-19/Germany/NW-KRO-206/2020 | I | 598 | T | 1 | 20200616 |
| EPI_ISL_753978 | Spike | hCoV-19/Germany/BE-ChVir-W1644-6714/2020 | T | 599 | I | 2 (geo) | 20200805 |
| EPI_ISL_562436 | Spike | hCoV-19/Australia/VIC9218/2020 | P | 600 | L | 1 | 20200820 |
| EPI_ISL_654742 | Spike | hCoV-19/USA/TX-DSHS-1396/2020 | P | 600 | S | 2 (geo) | 20200520 |
| EPI_ISL_755037 | Spike | hCoV-19/USA/CA-CDPH065/2020 | T | 602 | I | 4 (geo) | 20200327 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | T | 602 | K | 1 | 20200300 |
| EPI_ISL_582245 | Spike | hCoV-19/Canada/MB-NML-168/2020 | N | 603 | I | 6 (geo) | 20200328 |
| EPI_ISL_766383 | Spike | hCoV-19/Gibraltar/205121264/2020 | N | 603 | S | 13 (geo) | 20200000 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | N | 603 | K | 4 (geo) | 20200300 |
| EPI_ISL_710291 | Spike | hCoV-19/USA/CO-CDPHE-2005220636/2020 | N | 603 | H | 3 (geo) | 20200521 |
| EPI_ISL_628668 | Spike | hCoV-19/England/QEUH-A63C3A/2020 | N | 603 | D | 2 (geo) | 20201010 |
| EPI_ISL_790711 | Spike | hCoV-19/Netherlands/ZH-RIVM-20636/2020 | N | 603 | Y | 3 (geo) | 20201222 |
| EPI_ISL_451519 | Spike | hCoV-19/Australia/NSW254/2020 | T | 604 | I | 49 (geo) | 20200312 |
| EPI_ISL_629562 | Spike | hCoV-19/England/MILK-AC9221/2020 | T | 604 | Y | 6 (geo) | 20201022 |
| EPI_ISL_865953 | Spike | hCoV-19/England/LOND-12F61AB/2021 | T | 604 | A | 1 | 20210113 |
| EPI_ISL_466306 | Spike | hCoV-19/England/20156036504/2020 | S | 605 | Y | 1 | 20200408 |
| EPI_ISL_568478 | Spike | hCoV-19/Iran/K1r-78/2020 | S | 605 | F | 2 (geo) | 20200427 |
| EPI_ISL_508672 | Spike | hCoV-19/Spain/CT-IBV-005642/2020 | N | 606 | D | 31 (geo) | 20200504 |
| EPI_ISL_528331 | Spike | hCoV-19/Switzerland/BS-UHB-42202280/2020 | N | 606 | K | 8 (geo) | 20200322 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | N | 606 | Y | 3 (geo) | 20200300 |
| EPI_ISL_575751 | Spike | hCoV-19/England/ALDP-9CAB62/2020 | N | 606 | S | 6 (geo) | 20200916 |
| EPI_ISL_763620 | Spike | hCoV-19/England/PORT-2E8E5D/2020 | Q | 607 | H | 28 (geo) | 20200000 |
| EPI_ISL_507007 | Spike | hCoV-19/Iran/IRVSH-01/2020 | Q | 607 | L | 1 | 20200501 |
| EPI_ISL_846721 | Spike | hCoV-19/USA/MI-UM-10036929396/2020 | Q | 607 | R | 2 (geo) | 20201113 |
| EPI_ISL_831462 | Spike | hCoV-19/Germany/BE-RKI-I-0118/2020 | V | 608 | I | 11 (geo) | 20200000 |
| EPI_ISL_813476 | Spike | hCoV-19/England/EXET-13FCB8/2020 | A | 609 | V | 1 | 20201221 |
| EPI_ISL_790494 | Spike | hCoV-19/USA/TX-HMH-MCoV-12736/2020 | V | 610 | I | 2 (geo) | 20200831 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | L | 611 | F | 26 (geo) | 20200000 |
| EPI_ISL_442635 | Spike | hCoV-19/England/BRIS-123613/2020 | L | 611 | I | 1 | 20200406 |
| EPI_ISL_568484 | Spike | hCoV-19/Iran/K1r-6/2020 | Y | 612 | N | 1 | 20200322 |
| EPI_ISL_785057 | Spike | hCoV-19/USA/TX-HMH-MCoV-18709/2020 | Y | 612 | F | 1 | 20201122 |
| EPI_ISL_705507 | Spike | hCoV-19/England/CAMB-1B9032/2020 | Q | 613 | H | 682 (geo) | 20200000 |
| EPI_ISL_654739 | Spike | hCoV-19/USA/TX-DSHS-1394/2020 | Q | 613 | L | 4 (geo) | 20200517 |
| EPI_ISL_488062 | Spike | hCoV-19/England/NORT-2986FA/2020 | Q | 613 | R | 12 (geo) | 20200422 |
| EPI_ISL_491243 | Spike | hCoV-19/Portugal/IGC4260/2020 | Q | 613 | E | 2 (geo) | 20200603 |
| EPI_ISL_556144 | Spike | hCoV-19/England/ALDP-6CCF2B/2020 | Q | 613 | K | 2 (geo) | 20200702 |
| EPI_ISL_705553 | Spike | hCoV-19/England/CAMB-1BC98F/2020 | D | 614 | G | 389976 (geo) | 20200000 |
| EPI_ISL_741715 | Spike | hCoV-19/England/PORT-2EABFA/2020 | D | 614 | N | 50 (geo) | 20200000 |
| EPI_ISL_524104 | Spike | hCoV-19/USA/UT-08308/2020 | D | 614 | S | 4 (geo) | 20200521 |
| EPI_ISL_621561 | Spike | hCoV-19/Denmark/DCGC-4875/2020 | D | 614 | V | 3 (geo) | 20200921 |
| EPI_ISL_516783 | Spike | hCoV-19/South Korea/KCDC2653/2020 | D | 614 | A | 5 (geo) | 20200713 |
| EPI_ISL_424254 | Spike | hCoV-19/USA/WA-UW-1796/2020 | V | 615 | F | 36 (geo) | 20200321 |
| EPI_ISL_637679 | Spike | hCoV-19/England/CAMB-1B7553/2020 | V | 615 | I | 57 (geo) | 20200000 |
| EPI_ISL_412983 | Spike | hCoV-19/Tianmen/HBCDC-HB-07/2020 | V | 615 | L | 6 (geo) | 20200208 |
| EPI_ISL_511339 | Spike | hCoV-19/Portugal/PT1380/2020 | V | 615 | A | 4 (geo) | 20200326 |
| EPI_ISL_527890 | Spike | hCoV-19/Nigeria/ON752-CV144/2020 | N | 616 | K | 4 (geo) | 20200611 |
| EPI_ISL_577598 | Spike | hCoV-19/USA/UT-UPHL-01876/2020 | N | 616 | H | 1 | 20200413 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | C | 617 | R | 2 (geo) | 20200300 |
| EPI_ISL_728336 | Spike | hCoV-19/Morocco/FMP-18/2020 | C | 617 | L | 1 | 20201200 |
| EPI_ISL_461518 | Spike | hCoV-19/England/BIRM-5F5B8/2020 | T | 618 | I | 64 (geo) | 20200000 |
| EPI_ISL_453562 | Spike | hCoV-19/England/NORW-E8EC8/2020 | T | 618 | S | 11 (geo) | 20200425 |
| EPI_ISL_602887 | Spike | hCoV-19/South Africa/KRISP-K003707/2020 | T | 618 | R | 11 (geo) | 20201004 |
| EPI_ISL_696150 | Spike | hCoV-19/USA/AZ-TG664533/2020 | T | 618 | A | 6 (geo) | 20200420 |
| EPI_ISL_733066 | Spike | hCoV-19/Russia/MOW-RII-MH2907S/2020 | T | 618 | K | 1 | 20200927 |
| EPI_ISL_728336 | Spike | hCoV-19/Morocco/FMP-18/2020 | T | 618 | L | 1 | 20201200 |
| EPI_ISL_434030 | Spike | hCoV-19/England/CAMB-7C342/2020 | E | 619 | Q | 13 (geo) | 20200414 |
| EPI_ISL_455971 | Spike | hCoV-19/Belgium/ULG-10183/2020 | E | 619 | D | 4 (geo) | 20200509 |
| EPI_ISL_591320 | Spike | hCoV-19/Iran/K1r-112/2020 | E | 619 | K | 18 (geo) | 20200500 |
| EPI_ISL_663635 | Spike | hCoV-19/Australia/VIC16910/2020 | E | 619 | G | 9 (geo) | 20200000 |
| EPI_ISL_732147 | Spike | hCoV-19/Portugal/PT1937/2020 | E | 619 | A | 1 | 20201115 |
| EPI_ISL_728336 | Spike | hCoV-19/Morocco/FMP-18/2020 | E | 619 | L | 1 | 20201200 |
| EPI_ISL_437294 | Spike | hCoV-19/Germany/BY-MVP-0104/2020 | V | 620 | I | 3 (geo) | 20200410 |
| EPI_ISL_582007 | Spike | hCoV-19/Iran/SA-Isf-61/2020 | V | 620 | F | 2 (geo) | 20200513 |
| EPI_ISL_728336 | Spike | hCoV-19/Morocco/FMP-18/2020 | V | 620 | L | 1 | 20201200 |
| EPI_ISL_842019 | Spike | hCoV-19/England/PORT-2EACAC/2020 | P | 621 | S | 33 (geo) | 20200000 |
| EPI_ISL_568494 | Spike | hCoV-19/Iran/K1r-77/2020 | P | 621 | R | 2 (geo) | 20200427 |
| EPI_ISL_527775 | Spike | hCoV-19/USA/CT-Yale-359/2020 | P | 621 | T | 1 | 20200817 |
| EPI_ISL_459898 | Spike | hCoV-19/Luxembourg/LNS3923316/2020 | P | 621 | L | 5 (geo) | 20200513 |
| EPI_ISL_728336 | Spike | hCoV-19/Morocco/FMP-18/2020 | P | 621 | G | 1 | 20201200 |
| EPI_ISL_767508 | Spike | hCoV-19/USA/NY-Wadsworth-289792-01/2020 | V | 622 | F | 722 (geo) | 20200000 |
| EPI_ISL_440826 | Spike | hCoV-19/England/CAMB-77EFB/2020 | V | 622 | L | 27 (geo) | 20200331 |
| EPI_ISL_831434 | Spike | hCoV-19/Germany/BE-RKI-I-0094/2020 | V | 622 | A | 24 (geo) | 20200000 |
| EPI_ISL_415585 | Spike | hCoV-19/Canada/BC_65034/2020 | V | 622 | I | 53 (geo) | 20200304 |
| EPI_ISL_579367 | Spike | hCoV-19/New Zealand/20VR2947/2020 | A | 623 | V | 86 (geo) | 20200000 |
| EPI_ISL_509007 | Spike | hCoV-19/France/ARA-1276/2020 | A | 623 | S | 103 (geo) | 20200323 |
| EPI_ISL_628334 | Spike | hCoV-19/Scotland/QEUH-A321F9/2020 | A | 623 | T | 3 (geo) | 20201007 |
| EPI_ISL_568494 | Spike | hCoV-19/Iran/K1r-77/2020 | A | 623 | D | 1 | 20200427 |
| EPI_ISL_728336 | Spike | hCoV-19/Morocco/FMP-18/2020 | A | 623 | F | 1 | 20201200 |
| EPI_ISL_836859 | Spike | hCoV-19/England/ALDP-E8762F/2021 | I | 624 | V | 1 | 20210103 |
| EPI_ISL_568544 | Spike | hCoV-19/Peru/LIM-UPCH-0150/2020 | I | 624 | L | 1 | 20200827 |
| EPI_ISL_486386 | Spike | hCoV-19/India/KA-nimh-10106/2020 | I | 624 | T | 1 | 20200501 |
| EPI_ISL_685636 | Spike | hCoV-19/Japan/PG-2031/2020 | H | 625 | Y | 25 (geo) | 20200400 |
| EPI_ISL_848589 | Spike | hCoV-19/Brazil/PA-IEC169758/2020 | H | 625 | P | 1 | 20200422 |
| EPI_ISL_481689 | Spike | hCoV-19/Finland/5A55S2/2020 | H | 625 | R | 14 (geo) | 20200405 |
| EPI_ISL_736426 | Spike | hCoV-19/England/QEUH-C5462D/2020 | H | 625 | D | 1 | 20201212 |
| EPI_ISL_736989 | Spike | hCoV-19/South Africa/KRISP-EB00584676/2020 | H | 625 | L | 2 (geo) | 20201126 |
| EPI_ISL_435058 | Spike | hCoV-19/South Africa/R02606/2020 | H | 625 | Q | 1 | 20200311 |
| EPI_ISL_853963 | Spike | hCoV-19/Austria/CeMM1944/2020 | A | 626 | S | 1032 (geo) | 20200000 |
| EPI_ISL_542175 | Spike | hCoV-19/Italy/LOM-UniMI-L184/2020 | A | 626 | V | 103 (geo) | 20200314 |
| EPI_ISL_748423 | Spike | hCoV-19/Denmark/DCGC-19213/2020 | A | 626 | T | 25 (geo) | 20201207 |
| EPI_ISL_728336 | Spike | hCoV-19/Morocco/FMP-18/2020 | A | 626 | Q | 1 | 20201200 |
| EPI_ISL_489365 | Spike | hCoV-19/Northern Ireland/NIRE-1031AF/2020 | D | 627 | G | 12 (geo) | 20200421 |
| EPI_ISL_489900 | Spike | hCoV-19/USA/MN-GMF-07592/2020 | D | 627 | Y | 1 | 20200623 |
| EPI_ISL_784991 | Spike | hCoV-19/USA/TX-HMH-MCoV-18643/2020 | D | 627 | V | 1 | 20201120 |
| EPI_ISL_671995 | Spike | hCoV-19/Ecuador/UEES-7462/2020 | D | 627 | N | 7 (geo) | 20200000 |
| EPI_ISL_486386 | Spike | hCoV-19/India/KA-nimh-10106/2020 | D | 627 | H | 5 (geo) | 20200501 |
| EPI_ISL_794736 | Spike | hCoV-19/Tunisia/1268/2021 | D | 627 | E | 1 | 20210106 |
| EPI_ISL_852967 | Spike | hCoV-19/Spain/MD-IBV-99013708/2021 | D | 627 | A | 1 | 20210111 |
| EPI_ISL_486398 | Spike | hCoV-19/India/KA-nimh-5297/2020 | D | 627 | P | 1 | 20200425 |
| EPI_ISL_785878 | Spike | hCoV-19/USA/TX-HMH-MCoV-16194/2020 | Q | 628 | K | 4 (geo) | 20201028 |
| EPI_ISL_637080 | Spike | hCoV-19/Beijing/SC013F/2020 | Q | 628 | L | 7 (geo) | 20200200 |
| EPI_ISL_544324 | Spike | hCoV-19/USA/TX-HMH-4779/2020 | Q | 628 | E | 8 (geo) | 20200622 |
| EPI_ISL_817864 | Spike | hCoV-19/Denmark/DCGC-26951/2020 | Q | 628 | R | 1 | 20201228 |
| EPI_ISL_578142 | Spike | hCoV-19/USA/MI-UM-10033852483/2020 | L | 629 | I | 4 (geo) | 20200404 |
| EPI_ISL_787359 | Spike | hCoV-19/USA/TX-HMH-MCoV-14073/2020 | L | 629 | F | 8 (geo) | 20200814 |
| EPI_ISL_444440 | Spike | hCoV-19/England/CAMB-80EA4/2020 | L | 629 | V | 2 (geo) | 20200417 |
| EPI_ISL_417446 | Spike | hCoV-19/Italy/LOM-UniMI02/2020 | T | 630 | S | 1 | 20200224 |
| EPI_ISL_836595 | Spike | hCoV-19/England/CAMC-ED7E46/2021 | T | 630 | N | 1 | 20210105 |
| EPI_ISL_468658 | Spike | hCoV-19/Canada/BC_14667611/2020 | T | 630 | A | 1 | 20200400 |
| EPI_ISL_566165 | Spike | hCoV-19/England/ALDP-9CCDB5/2020 | T | 630 | I | 3 (geo) | 20200916 |
| EPI_ISL_579233 | Spike | hCoV-19/New Zealand/20VR2471/2020 | P | 631 | S | 110 (geo) | 20200000 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | P | 631 | H | 7 (geo) | 20200401 |
| EPI_ISL_423612 | Spike | hCoV-19/England/20130035204/2020 | P | 631 | L | 9 (geo) | 20200323 |
| EPI_ISL_708789 | Spike | hCoV-19/Australia/WA495/2020 | P | 631 | T | 4 (geo) | 20201124 |
| EPI_ISL_482889 | Spike | hCoV-19/France/OCC-31/2020 | P | 631 | F | 1 | 20200612 |
| EPI_ISL_641239 | Spike | hCoV-19/Australia/VIC12754/2020 | T | 632 | N | 268 (geo) | 20200000 |
| EPI_ISL_676905 | Spike | hCoV-19/USA/NY-Wadsworth-78727-01/2020 | T | 632 | I | 24 (geo) | 20200504 |
| EPI_ISL_454545 | Spike | hCoV-19/India/MH-NIV-6638/2020 | T | 632 | S | 1 | 20200402 |
| EPI_ISL_547686 | Spike | hCoV-19/USA/WI-GMF-14662/2020 | T | 632 | K | 1 | 20200810 |
| EPI_ISL_495573 | Spike | hCoV-19/USA/MI-UM-2006S001082/2020 | T | 632 | A | 1 | 20200412 |
| EPI_ISL_454545 | Spike | hCoV-19/India/MH-NIV-6638/2020 | W | 633 | P | 1 | 20200402 |
| EPI_ISL_547686 | Spike | hCoV-19/USA/WI-GMF-14662/2020 | W | 633 | G | 1 | 20200810 |
| EPI_ISL_496177 | Spike | hCoV-19/USA/WA-S1751/2020 | W | 633 | R | 1 | 20200601 |
| EPI_ISL_786652 | Spike | hCoV-19/USA/TX-HMH-MCoV-15168/2020 | W | 633 | C | 1 | 20201019 |
| EPI_ISL_770129 | Spike | hCoV-19/Spain/M-CISA-181/2020 | R | 634 | H | 3 (geo) | 20200419 |
| EPI_ISL_454562 | Spike | hCoV-19/India/MH-NIV-815-3/2020 | R | 634 | S | 1 | 20200407 |
| EPI_ISL_646457 | Spike | hCoV-19/England/QEUH-B2C8A1/2020 | R | 634 | C | 1 | 20201103 |
| EPI_ISL_791742 | Spike | hCoV-19/USA/MA-MGH-00745/2020 | R | 634 | L | 3 (geo) | 20200410 |
| EPI_ISL_547686 | Spike | hCoV-19/USA/WI-GMF-14662/2020 | R | 634 | Q | 1 | 20200810 |
| EPI_ISL_635549 | Spike | hCoV-19/Mexico/BCN-ALSR-2546/2020 | V | 635 | I | 13 (geo) | 20200629 |
| EPI_ISL_707959 | Spike | hCoV-19/Germany/SL-SU-10430142/2020 | V | 635 | A | 3 (geo) | 20200329 |
| EPI_ISL_454545 | Spike | hCoV-19/India/MH-NIV-6638/2020 | V | 635 | T | 1 | 20200402 |
| EPI_ISL_547686 | Spike | hCoV-19/USA/WI-GMF-14662/2020 | V | 635 | Q | 1 | 20200810 |
| EPI_ISL_664199 | Spike | hCoV-19/England/CAMB-1BB81A/2020 | V | 635 | F | 2 (geo) | 20201118 |
| EPI_ISL_454545 | Spike | hCoV-19/India/MH-NIV-6638/2020 | Y | 636 | R | 1 | 20200402 |
| EPI_ISL_547686 | Spike | hCoV-19/USA/WI-GMF-14662/2020 | Y | 636 | Q | 1 | 20200810 |
| EPI_ISL_451317 | Spike | hCoV-19/Sichuan/SC-GA-066/2020 | Y | 636 | F | 2 (geo) | 20200203 |
| EPI_ISL_590515 | Spike | hCoV-19/England/QEUH-9B7500/2020 | Y | 636 | H | 1 | 20200907 |
| EPI_ISL_851040 | Spike | hCoV-19/USA/PA-CDC-STM-246/2020 | S | 637 | Y | 1 | 20201230 |
| EPI_ISL_474512 | Spike | hCoV-19/Wales/PHWC-35A04/2020 | S | 637 | F | 4 (geo) | 20200424 |
| EPI_ISL_454553 | Spike | hCoV-19/India/MH-NIV-8187/2020 | S | 637 | T | 1 | 20200402 |
| EPI_ISL_474390 | Spike | hCoV-19/Wales/PHWC-32A9E/2020 | T | 638 | I | 38 (geo) | 20200415 |
| EPI_ISL_570257 | Spike | hCoV-19/USA/WA-UW-9504/2020 | T | 638 | A | 21 (geo) | 20200518 |
| EPI_ISL_819298 | Spike | hCoV-19/Spain/CT-HUVH-61925/2020 | T | 638 | R | 2 (geo) | 20200602 |
| EPI_ISL_511936 | Spike | hCoV-19/India/MH-GA91/2020 | T | 638 | S | 1 | 20200617 |
| EPI_ISL_854070 | Spike | hCoV-19/Austria/CeMM1640/2020 | G | 639 | S | 174 (geo) | 20200000 |
| EPI_ISL_443629 | Spike | hCoV-19/England/CAMB-1AA2B6/2020 | G | 639 | V | 8 (geo) | 20200417 |
| EPI_ISL_797214 | Spike | hCoV-19/England/MILK-DAAE01/2020 | G | 639 | D | 2 (geo) | 20201227 |
| EPI_ISL_860398 | Spike | hCoV-19/Germany/NW-KRO-081/2020 | G | 639 | C | 3 (geo) | 20200623 |
| EPI_ISL_492174 | Spike | hCoV-19/Australia/SAP409/2020 | S | 640 | F | 414 (geo) | 20200314 |
| EPI_ISL_636840 | Spike | hCoV-19/Lithuania/MR-LUHS-Eilnr174/2020 | S | 640 | Y | 5 (geo) | 20200721 |
| EPI_ISL_746589 | Spike | hCoV-19/Chile/RM-112760/2020 | S | 640 | P | 6 (geo) | 20200628 |
| EPI_ISL_444758 | Spike | hCoV-19/USA/NY-NYUMC641/2020 | S | 640 | A | 5 (geo) | 20200403 |
| EPI_ISL_854296 | Spike | hCoV-19/Austria/CeMM1951/2020 | N | 641 | Y | 17 (geo) | 20200000 |
| EPI_ISL_439927 | Spike | hCoV-19/England/CAMB-71C15/2020 | N | 641 | S | 18 (geo) | 20200331 |
| EPI_ISL_766665 | Spike | hCoV-19/USA/TX-DSHS-2051/2020 | N | 641 | K | 12 (geo) | 20201203 |
| EPI_ISL_666046 | Spike | hCoV-19/Scotland/CVR5851/2020 | N | 641 | T | 1 | 20201116 |
| EPI_ISL_833338 | Spike | hCoV-19/Philippines/PH-RITM-0024/2020 | V | 642 | L | 3 (geo) | 20201012 |
| EPI_ISL_862782 | Spike | hCoV-19/USA/UT-UPHL-2101269447/2020 | V | 642 | D | 1 | 20201215 |
| EPI_ISL_542208 | Spike | hCoV-19/Italy/LOM-UniMI-L221/2020 | V | 642 | F | 22 (geo) | 20200314 |
| EPI_ISL_539380 | Spike | hCoV-19/Switzerland/VD-ETHZ-260053/2020 | V | 642 | I | 2 (geo) | 20200824 |
| EPI_ISL_704266 | Spike | hCoV-19/England/PORT-2F5619/2020 | V | 642 | G | 17 (geo) | 20200000 |
| EPI_ISL_522449 | Spike | hCoV-19/South Korea/KCDC2667/2020 | V | 642 | A | 2 (geo) | 20200527 |
| EPI_ISL_614664 | Spike | hCoV-19/Denmark/DCGC-1170/2020 | F | 643 | L | 34 (geo) | 20200316 |
| EPI_ISL_492361 | Spike | hCoV-19/England/BRIS-18538CF/2020 | F | 643 | I | 3 (geo) | 20200415 |
| EPI_ISL_730068 | Spike | hCoV-19/USA/CT-Yale-606/2020 | F | 643 | Y | 2 (geo) | 20200505 |
| EPI_ISL_671919 | Spike | hCoV-19/Ireland/LK-NVRL-75IRL32487/2020 | T | 645 | I | 1 | 20201007 |
| EPI_ISL_825873 | Spike | hCoV-19/Canada/Qc-JEW-Q8180884/2020 | R | 646 | H | 8 (geo) | 20200418 |
| EPI_ISL_692950 | Spike | hCoV-19/USA/MA-MASPHL-00697/2020 | R | 646 | L | 2 (geo) | 20200423 |
| EPI_ISL_568508 | Spike | hCoV-19/Iran/K1r-121/2020 | R | 646 | P | 1 | 20200527 |
| EPI_ISL_451437 | Spike | hCoV-19/USA/NY-NYUMC722/2020 | A | 647 | S | 164 (geo) | 20200326 |
| EPI_ISL_571660 | Spike | hCoV-19/USA/NY-QDX-851/2020 | A | 647 | V | 36 (geo) | 20200316 |
| EPI_ISL_578604 | Spike | hCoV-19/USA/WI-WSLH-200462/2020 | A | 647 | T | 3 (geo) | 20200518 |
| EPI_ISL_552117 | Spike | hCoV-19/Wales/MILK-99368F/2020 | A | 647 | P | 1 | 20200829 |
| EPI_ISL_582015 | Spike | hCoV-19/Iran/SA-Isf-67/2020 | G | 648 | R | 2 (geo) | 20200510 |
| EPI_ISL_475586 | Spike | hCoV-19/USA/CA-CSMC110/2020 | C | 649 | F | 1 | 20200322 |
| EPI_ISL_603264 | Spike | hCoV-19/USA/WA-UW-361/2020 | L | 650 | R | 1 | 20200311 |
| EPI_ISL_698286 | Spike | hCoV-19/United Arab Emirates/0094/2020 | I | 651 | V | 5 (geo) | 20200519 |
| EPI_ISL_812793 | Spike | hCoV-19/Egypt/CCHE57357-A-13/2020 | I | 651 | T | 1 | 20200429 |
| EPI_ISL_445103 | Spike | hCoV-19/USA/CA-SR0107/2020 | G | 652 | A | 1 | 20200313 |
| EPI_ISL_639823 | Spike | hCoV-19/Gibraltar/204641714/2020 | G | 652 | V | 2 (geo) | 20200000 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | G | 652 | R | 5 (geo) | 20200300 |
| EPI_ISL_639739 | Spike | hCoV-19/Romania/BUCHAREST-IMT-1/2020 | - | 652 | A | 1 | 20200720 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | G | 652 | H | 1 | 20200408 |
| EPI_ISL_860398 | Spike | hCoV-19/Germany/NW-KRO-081/2020 | G | 652 | D | 1 | 20200623 |
| EPI_ISL_486837 | Spike | hCoV-19/India/KA-InStem-NCBS-0088/2020 | A | 653 | V | 131 (geo) | 20200000 |
| EPI_ISL_568506 | Spike | hCoV-19/Iran/K1r-136/2020 | A | 653 | P | 5 (geo) | 20200427 |
| EPI_ISL_427502 | Spike | hCoV-19/USA/NY-NYUMC207/2020 | A | 653 | S | 6 (geo) | 20200403 |
| EPI_ISL_445510 | Spike | hCoV-19/Wales/PHWC-29335/2020 | E | 654 | K | 79 (geo) | 20200404 |
| EPI_ISL_416480 | Spike | hCoV-19/Georgia/Tb-537/2020 | E | 654 | Q | 341 (geo) | 20200311 |
| EPI_ISL_541698 | Spike | hCoV-19/India/MH-NIV-13804/2020 | E | 654 | A | 14 (geo) | 20200423 |
| EPI_ISL_441515 | Spike | hCoV-19/England/NOTT-11043D/2020 | E | 654 | D | 30 (geo) | 20200418 |
| EPI_ISL_528845 | Spike | hCoV-19/India/TG-CCMB-X110/2020 | E | 654 | V | 16 (geo) | 20200715 |
| EPI_ISL_794822 | Spike | hCoV-19/Greece/CP0800977/2020 | E | 654 | G | 1 | 20201230 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | E | 654 | H | 1 | 20200408 |
| EPI_ISL_448554 | Spike | hCoV-19/England/OXON-AD014/2020 | H | 655 | Y | 1363 (geo) | 20200000 |
| EPI_ISL_429685 | Spike | hCoV-19/Brazil/MG-CV27/2020 | H | 655 | D | 2 (geo) | 20200317 |
| EPI_ISL_495284 | Spike | hCoV-19/India/TG-CCMB-OM18/2020 | H | 655 | Q | 9 (geo) | 20200517 |
| EPI_ISL_462279 | Spike | hCoV-19/Singapore/161/2020 | H | 655 | R | 4 (geo) | 20200319 |
| EPI_ISL_498234 | Spike | hCoV-19/Senegal/9840/2020 | H | 655 | A | 1 | 20200425 |
| EPI_ISL_708157 | Spike | hCoV-19/Norway/5746/2020 | V | 656 | G | 1 | 20201026 |
| EPI_ISL_486480 | Spike | hCoV-19/Switzerland/VS-ETHZ-110048/2020 | V | 656 | A | 3 (geo) | 20200401 |
| EPI_ISL_741655 | Spike | hCoV-19/England/NOTT-121779/2020 | V | 656 | I | 1 | 20201220 |
| EPI_ISL_677351 | Spike | hCoV-19/USA/WI-UW-1942/2020 | N | 657 | K | 16 (geo) | 20201004 |
| EPI_ISL_850062 | Spike | hCoV-19/USA/CA-CZB-16033/2020 | N | 657 | D | 1 | 20201124 |
| EPI_ISL_520675 | Spike | hCoV-19/United Arab Emirates/L2005036083/2020 | N | 657 | S | 1 | 20200515 |
| EPI_ISL_468277 | Spike | hCoV-19/Switzerland/TI-ETHZ-120204/2020 | N | 657 | Y | 1 | 20200428 |
| EPI_ISL_474824 | Spike | hCoV-19/Spain/CM-IBV-003879/2020 | N | 657 | H | 1 | 20200520 |
| EPI_ISL_591063 | Spike | hCoV-19/Iran/SA-Isf-8/2020 | N | 657 | I | 1 | 20200510 |
| EPI_ISL_463653 | Spike | hCoV-19/USA/WA-S1163/2020 | N | 658 | T | 9 (geo) | 20200506 |
| EPI_ISL_568506 | Spike | hCoV-19/Iran/K1r-136/2020 | N | 658 | H | 3 (geo) | 20200427 |
| EPI_ISL_507059 | Spike | hCoV-19/England/LOND-124D169/2020 | N | 658 | D | 27 (geo) | 20200323 |
| EPI_ISL_545397 | Spike | hCoV-19/USA/TX-HMH-2574/2020 | N | 658 | K | 18 (geo) | 20200601 |
| EPI_ISL_446563 | Spike | hCoV-19/Wales/PHWC-31D78/2020 | N | 658 | Y | 10 (geo) | 20200411 |
| EPI_ISL_413877 | Spike | hCoV-19/Guangdong/GD2020241-P0013/2020 | N | 658 | S | 1 | 20200209 |
| EPI_ISL_454914 | Spike | hCoV-19/Wuhan/HB-WH1-137/2020 | S | 659 | L | 50 (geo) | 20200303 |
| EPI_ISL_783071 | Spike | hCoV-19/England/MILK-BAF9A3/2020 | S | 659 | T | 2 (geo) | 20201117 |
| EPI_ISL_522338 | Spike | hCoV-19/USA/UT-04292/2020 | S | 659 | P | 3 (geo) | 20200515 |
| EPI_ISL_774887 | Spike | hCoV-19/Bangladesh/DNAS_DRCIM_CPH_isl_515_BGD/2020 | Y | 660 | F | 11 (geo) | 20200429 |
| EPI_ISL_733010 | Spike | hCoV-19/Russia/PRI-RII-MH762S/2020 | Y | 660 | H | 2 (geo) | 20200811 |
| EPI_ISL_582026 | Spike | hCoV-19/Iran/K1r-28/2020 | E | 661 | D | 32 (geo) | 20200300 |
| EPI_ISL_538338 | Spike | hCoV-19/Canada/ON-OICR-SLB2809/2020 | E | 661 | G | 4 (geo) | 20200331 |
| EPI_ISL_454351 | Spike | hCoV-19/Portugal/PT0628/2020 | E | 661 | V | 1 | 20200406 |
| EPI_ISL_585226 | Spike | hCoV-19/Northern Ireland/NIRE-FB30F/2020 | E | 661 | A | 2 (geo) | 20200901 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | E | 661 | K | 1 | 20200300 |
| EPI_ISL_788026 | Spike | hCoV-19/USA/TX-HMH-MCoV-12874/2020 | C | 662 | Y | 1 | 20200818 |
| EPI_ISL_514273 | Spike | hCoV-19/Israel/CVL-n25877/2020 | C | 662 | S | 1 | 20200720 |
| EPI_ISL_833486 | Spike | hCoV-19/Belgium/UZA-UA-7537/2021 | D | 663 | A | 1 | 20210111 |
| EPI_ISL_568506 | Spike | hCoV-19/Iran/K1r-136/2020 | I | 664 | L | 2 (geo) | 20200427 |
| EPI_ISL_514273 | Spike | hCoV-19/Israel/CVL-n25877/2020 | I | 664 | K | 1 | 20200720 |
| EPI_ISL_833486 | Spike | hCoV-19/Belgium/UZA-UA-7537/2021 | I | 664 | H | 1 | 20210111 |
| EPI_ISL_475595 | Spike | hCoV-19/USA/CA-CSMC119/2020 | I | 664 | M | 2 (geo) | 20200405 |
| EPI_ISL_785776 | Spike | hCoV-19/USA/TX-HMH-MCoV-16092/2020 | P | 665 | T | 2 (geo) | 20201029 |
| EPI_ISL_590939 | Spike | hCoV-19/Norway/3582/2020 | P | 665 | S | 2 (geo) | 20200731 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | P | 665 | A | 1 | 20200619 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | I | 666 | M | 4 (geo) | 20200310 |
| EPI_ISL_437968 | Spike | hCoV-19/Austria/CeMM0109/2020 | I | 666 | V | 2 (geo) | 20200312 |
| EPI_ISL_833486 | Spike | hCoV-19/Belgium/UZA-UA-7537/2021 | I | 666 | H | 1 | 20210111 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | I | 666 | E | 1 | 20200619 |
| EPI_ISL_833486 | Spike | hCoV-19/Belgium/UZA-UA-7537/2021 | G | 667 | W | 1 | 20210111 |
| EPI_ISL_749359 | Spike | hCoV-19/Denmark/DCGC-17865/2020 | G | 667 | I | 1 | 20201214 |
| EPI_ISL_425915 | Spike | hCoV-19/Scotland/EDB146/2020 | G | 667 | S | 1 | 20200323 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | G | 667 | V | 1 | 20200523 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | G | 667 | H | 1 | 20200619 |
| EPI_ISL_475575 | Spike | hCoV-19/USA/CA-CSMC100/2020 | A | 668 | S | 34 (geo) | 20200402 |
| EPI_ISL_513471 | Spike | hCoV-19/USA/ME-HETL-J0060/2020 | A | 668 | V | 8 (geo) | 20200320 |
| EPI_ISL_833486 | Spike | hCoV-19/Belgium/UZA-UA-7537/2021 | A | 668 | C | 1 | 20210111 |
| EPI_ISL_749359 | Spike | hCoV-19/Denmark/DCGC-17865/2020 | A | 668 | R | 1 | 20201214 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | A | 668 | I | 1 | 20200523 |
| EPI_ISL_596384 | Spike | hCoV-19/Iran/K1r-117/2020 | G | 669 | R | 5 (geo) | 20200500 |
| EPI_ISL_558301 | Spike | hCoV-19/England/MILK-559C3C/2020 | G | 669 | A | 3 (geo) | 20200610 |
| EPI_ISL_833486 | Spike | hCoV-19/Belgium/UZA-UA-7537/2021 | G | 669 | T | 1 | 20210111 |
| EPI_ISL_749359 | Spike | hCoV-19/Denmark/DCGC-17865/2020 | G | 669 | L | 1 | 20201214 |
| EPI_ISL_480585 | Spike | hCoV-19/Australia/VIC1168/2020 | G | 669 | C | 1 | 20200410 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | G | 669 | N | 1 | 20200619 |
| EPI_ISL_465845 | Spike | hCoV-19/England/201390448/2020 | I | 670 | V | 25 (geo) | 20200327 |
| EPI_ISL_448997 | Spike | hCoV-19/England/NORW-E6FF4/2020 | I | 670 | L | 19 (geo) | 20200420 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | I | 670 | M | 29 (geo) | 20200310 |
| EPI_ISL_749359 | Spike | hCoV-19/Denmark/DCGC-17865/2020 | I | 670 | R | 1 | 20201214 |
| EPI_ISL_468965 | Spike | hCoV-19/Spain/IB-IBV-2528/2020 | I | 670 | W | 1 | 20200321 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | I | 670 | S | 1 | 20201221 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | I | 670 | N | 1 | 20200619 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | C | 671 | S | 5 (geo) | 20200310 |
| EPI_ISL_749359 | Spike | hCoV-19/Denmark/DCGC-17865/2020 | C | 671 | L | 1 | 20201214 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | C | 671 | I | 1 | 20201221 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | C | 671 | R | 1 | 20200523 |
| EPI_ISL_854059 | Spike | hCoV-19/Austria/CeMM1628/2020 | A | 672 | V | 121 (geo) | 20200000 |
| EPI_ISL_507007 | Spike | hCoV-19/Iran/IRVSH-01/2020 | A | 672 | D | 1 | 20200501 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | A | 672 | H | 5 (geo) | 20200310 |
| EPI_ISL_478096 | Spike | hCoV-19/Scotland/CVR3705/2020 | A | 672 | S | 2 (geo) | 20200526 |
| EPI_ISL_549050 | Spike | hCoV-19/Norway/3166/2020 | A | 672 | T | 1 | 20200817 |
| EPI_ISL_749359 | Spike | hCoV-19/Denmark/DCGC-17865/2020 | A | 672 | I | 1 | 20201214 |
| EPI_ISL_582025 | Spike | hCoV-19/Iran/K1r-24/2020 | A | 672 | P | 2 (geo) | 20200300 |
| EPI_ISL_468965 | Spike | hCoV-19/Spain/IB-IBV-2528/2020 | A | 672 | R | 1 | 20200321 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | A | 672 | L | 1 | 20200523 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | A | 672 | Y | 1 | 20200619 |
| EPI_ISL_854082 | Spike | hCoV-19/Austria/CeMM1654/2020 | S | 673 | T | 506 (geo) | 20200000 |
| EPI_ISL_510845 | Spike | hCoV-19/Sweden/20-51765/2020 | S | 673 | G | 29 (geo) | 20200527 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | S | 673 | I | 5 (geo) | 20200523 |
| EPI_ISL_635832 | Spike | hCoV-19/USA/CA-ALSR-3079/2020 | S | 673 | R | 3 (geo) | 20200827 |
| EPI_ISL_749359 | Spike | hCoV-19/Denmark/DCGC-17865/2020 | S | 673 | L | 1 | 20201214 |
| EPI_ISL_468965 | Spike | hCoV-19/Spain/IB-IBV-2528/2020 | S | 673 | Y | 1 | 20200321 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | S | 673 | H | 1 | 20201221 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | S | 673 | E | 1 | 20200619 |
| EPI_ISL_439196 | Spike | hCoV-19/Scotland/EDB2382/2020 | Y | 674 | F | 28 (geo) | 20200422 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | Y | 674 | L | 2 (geo) | 20200523 |
| EPI_ISL_825402 | Spike | hCoV-19/Japan/IC-0667/2021 | - | 674 | Q | 1 | 20210100 |
| EPI_ISL_825402 | Spike | hCoV-19/Japan/IC-0667/2021 | - | 674 | T | 1 | 20210100 |
| EPI_ISL_468965 | Spike | hCoV-19/Spain/IB-IBV-2528/2020 | Y | 674 | N | 1 | 20200321 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | Y | 674 | C | 2 (geo) | 20200619 |
| EPI_ISL_452764 | Spike | hCoV-19/Spain/PV-IBV-000702/2020 | Q | 675 | R | 447 (geo) | 20200304 |
| EPI_ISL_841917 | Spike | hCoV-19/England/PORT-2E204E/2020 | Q | 675 | H | 1086 (geo) | 20200000 |
| EPI_ISL_426305 | Spike | hCoV-19/USA/NY-Wadsworth-31930-01/2020 | Q | 675 | K | 6 (geo) | 20200328 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | Q | 675 | E | 4 (geo) | 20200310 |
| EPI_ISL_729378 | Spike | hCoV-19/Germany/ChVir7253/2020 | Q | 675 | P | 5 (geo) | 20200000 |
| EPI_ISL_749359 | Spike | hCoV-19/Denmark/DCGC-17865/2020 | Q | 675 | G | 1 | 20201214 |
| EPI_ISL_695911 | Spike | hCoV-19/USA/AZ-TG648726/2020 | Q | 675 | L | 2 (geo) | 20200410 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | Q | 675 | D | 1 | 20200619 |
| EPI_ISL_494771 | Spike | hCoV-19/Italy/CAM-INTPas-10/2020 | T | 676 | I | 123 (geo) | 20200000 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | T | 676 | L | 4 (geo) | 20200310 |
| EPI_ISL_434615 | Spike | hCoV-19/USA/WI-UW-269/2020 | T | 676 | S | 4 (geo) | 20200406 |
| EPI_ISL_622064 | Spike | hCoV-19/Denmark/DCGC-4108/2020 | T | 676 | N | 4 (geo) | 20200914 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | T | 676 | A | 7 (geo) | 20200408 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | T | 676 | G | 2 (geo) | 20200523 |
| EPI_ISL_490291 | Spike | hCoV-19/South Africa/R10639/2020 | T | 676 | P | 5 (geo) | 20200611 |
| EPI_ISL_853964 | Spike | hCoV-19/Austria/CeMM1947/2020 | Q | 677 | H | 2133 (geo) | 20200000 |
| EPI_ISL_467295 | Spike | hCoV-19/Spain/GA-IBV-002723/2020 | Q | 677 | P | 306 (geo) | 20200407 |
| EPI_ISL_445402 | Spike | hCoV-19/Wales/PHWC-28B01/2020 | Q | 677 | Y | 6 (geo) | 20200402 |
| EPI_ISL_746490 | Spike | hCoV-19/Chile/RM-189472/2020 | Q | 677 | K | 3 (geo) | 20200924 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | Q | 677 | L | 9 (geo) | 20200310 |
| EPI_ISL_571910 | Spike | hCoV-19/USA/WI-QDX-1072/2020 | Q | 677 | R | 60 (geo) | 20200319 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | Q | 677 | G | 1 | 20200523 |
| EPI_ISL_671311 | Spike | hCoV-19/Gibraltar/204841744/2020 | T | 678 | I | 154 (geo) | 20200000 |
| EPI_ISL_717905 | Spike | hCoV-19/Brazil/RJ-00516/2020 | T | 678 | P | 2 (geo) | 20200728 |
| EPI_ISL_492865 | Spike | hCoV-19/England/LOND-124C522/2020 | T | 678 | S | 1 | 20200410 |
| EPI_ISL_665235 | Spike | hCoV-19/England/LOND-12507E9/2020 | T | 678 | N | 1 | 20201026 |
| EPI_ISL_749359 | Spike | hCoV-19/Denmark/DCGC-17865/2020 | T | 678 | V | 1 | 20201214 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | T | 678 | H | 1 | 20200523 |
| EPI_ISL_794668 | Spike | hCoV-19/Australia/TAS000283/2020 | N | 679 | S | 24 (geo) | 20200000 |
| EPI_ISL_763128 | Spike | hCoV-19/Netherlands/LI-EMC-160/2020 | N | 679 | K | 414 (geo) | 20200000 |
| EPI_ISL_723071 | Spike | hCoV-19/India/MH-ACTREC-645/2020 | N | 679 | H | 5 (geo) | 20200914 |
| EPI_ISL_418374 | Spike | hCoV-19/Canada/ON-PHL-4232/2020 | N | 679 | Y | 2 (geo) | 20200300 |
| EPI_ISL_527556 | Spike | hCoV-19/DRC/11143/2020 | N | 679 | I | 2 (geo) | 20200524 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | N | 679 | V | 2 (geo) | 20200523 |
| EPI_ISL_508181 | Spike | hCoV-19/India/UT-AR33/2020 | N | 679 | T | 1 | 20200602 |
| EPI_ISL_860393 | Spike | hCoV-19/Germany/NW-KRO-076/2020 | N | 679 | D | 1 | 20200623 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | N | 679 | G | 1 | 20200619 |
| EPI_ISL_524057 | Spike | hCoV-19/USA/TX-DSHS-0176/2020 | S | 680 | F | 35 (geo) | 20200312 |
| EPI_ISL_705505 | Spike | hCoV-19/England/CAMB-1B9005/2020 | S | 680 | P | 11 (geo) | 20200000 |
| EPI_ISL_832130 | Spike | hCoV-19/France/GE-IPP10935/2020 | S | 680 | T | 7 (geo) | 20201217 |
| EPI_ISL_479449 | Spike | hCoV-19/Wales/PHWC-1652F3/2020 | S | 680 | V | 1 | 20200523 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | S | 680 | A | 1 | 20200619 |
| EPI_ISL_766219 | Spike | hCoV-19/England/205261952/2020 | P | 681 | H | 32858 (geo) | 20200000 |
| EPI_ISL_648363 | Spike | hCoV-19/Equatorial Guinea/17354/2020 | P | 681 | R | 271 (geo) | 20200611 |
| EPI_ISL_672010 | Spike | hCoV-19/Ecuador/UEES-3685/2020 | P | 681 | L | 148 (geo) | 20200000 |
| EPI_ISL_454059 | Spike | hCoV-19/Portugal/PT0343/2020 | P | 681 | S | 26 (geo) | 20200317 |
| EPI_ISL_789993 | Spike | hCoV-19/USA/TX-HMH-MCoV-12825/2020 | P | 681 | T | 1 | 20200819 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | P | 681 | G | 1 | 20200619 |
| EPI_ISL_444274 | Spike | hCoV-19/Taiwan/CGMH-CGU-21/2020 | R | 682 | W | 9 (geo) | 20200229 |
| EPI_ISL_429292 | Spike | hCoV-19/Denmark/ALAB-HH36/2020 | R | 682 | I | 7 (geo) | 20200312 |
| EPI_ISL_510689 | Spike | hCoV-19/Spain/CT-IrsiCaixa-2020030095/2020 | R | 682 | L | 3 (geo) | 20200313 |
| EPI_ISL_415709 | Spike | hCoV-19/Hangzhou/ZJU-01/2020 | R | 682 | Q | 5 (geo) | 20200125 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | R | 682 | G | 1 | 20200422 |
| EPI_ISL_425243 | Spike | hCoV-19/England/CAMB-73800/2020 | R | 683 | Q | 8 (geo) | 20200401 |
| EPI_ISL_676941 | Spike | hCoV-19/USA/NY-Wadsworth-103677-01/2020 | R | 683 | W | 19 (geo) | 20200515 |
| EPI_ISL_706867 | Spike | hCoV-19/England/PORT-2D4D2A/2020 | R | 683 | L | 14 (geo) | 20200000 |
| EPI_ISL_422909 | Spike | hCoV-19/Netherlands/ZuidHolland_37/2020 | R | 683 | P | 1 | 20200317 |
| EPI_ISL_684112 | Spike | hCoV-19/Japan/PG-0078/2020 | R | 683 | G | 1 | 20200200 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | R | 683 | C | 1 | 20200619 |
| EPI_ISL_472509 | Spike | hCoV-19/Wales/PHWC-15C5AB/2020 | A | 684 | T | 18 (geo) | 20200329 |
| EPI_ISL_596379 | Spike | hCoV-19/Iran/K1r-7/2020 | A | 684 | V | 175 (geo) | 20200300 |
| EPI_ISL_614414 | Spike | hCoV-19/Denmark/DCGC-911/2020 | A | 684 | S | 7 (geo) | 20200330 |
| EPI_ISL_429292 | Spike | hCoV-19/Denmark/ALAB-HH36/2020 | A | 684 | L | 6 (geo) | 20200312 |
| EPI_ISL_447381 | Spike | hCoV-19/Israel/2086004/2020 | A | 684 | E | 2 (geo) | 20200401 |
| EPI_ISL_788884 | Spike | hCoV-19/USA/TX-HMH-MCoV-13791/2020 | A | 684 | G | 1 | 20200818 |
| EPI_ISL_641315 | Spike | hCoV-19/USA/WA-RML-6/2020 | R | 685 | Q | 1 | 20200511 |
| EPI_ISL_568508 | Spike | hCoV-19/Iran/K1r-121/2020 | R | 685 | P | 3 (geo) | 20200527 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | R | 685 | S | 1 | 20200619 |
| EPI_ISL_429292 | Spike | hCoV-19/Denmark/ALAB-HH36/2020 | S | 686 | L | 6 (geo) | 20200312 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | S | 686 | R | 3 (geo) | 20200324 |
| EPI_ISL_428867 | Spike | hCoV-19/Russia/Krasnodar-63401/2020 | S | 686 | G | 2 (geo) | 20200311 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | S | 686 | T | 4 (geo) | 20200422 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | S | 686 | Y | 1 | 20200619 |
| EPI_ISL_593988 | Spike | hCoV-19/England/204221488/2020 | V | 687 | L | 307 (geo) | 20200000 |
| EPI_ISL_610245 | Spike | hCoV-19/England/2/2020 | V | 687 | I | 38 (geo) | 20200129 |
| EPI_ISL_568508 | Spike | hCoV-19/Iran/K1r-121/2020 | V | 687 | A | 4 (geo) | 20200527 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | V | 687 | Q | 1 | 20200619 |
| EPI_ISL_627066 | Spike | hCoV-19/England/EXET-138CEC/2020 | A | 688 | V | 1379 (geo) | 20200000 |
| EPI_ISL_466126 | Spike | hCoV-19/England/20149007304/2020 | A | 688 | S | 91 (geo) | 20200330 |
| EPI_ISL_596379 | Spike | hCoV-19/Iran/K1r-7/2020 | A | 688 | P | 5 (geo) | 20200300 |
| EPI_ISL_508806 | Spike | hCoV-19/USA/FL-BPHL-0602/2020 | A | 688 | T | 6 (geo) | 20200320 |
| EPI_ISL_873025 | Spike | hCoV-19/Russia/SPE-RII-MH13658S/2020 | A | 688 | D | 1 | 20201227 |
| EPI_ISL_419186 | Spike | hCoV-19/France/ARA-12265/2020 | S | 689 | I | 125 (geo) | 20200322 |
| EPI_ISL_629391 | Spike | hCoV-19/England/MILK-AC841D/2020 | S | 689 | R | 32 (geo) | 20201021 |
| EPI_ISL_686869 | Spike | hCoV-19/Japan/PG-7767/2020 | S | 689 | G | 3 (geo) | 20200400 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | S | 689 | N | 3 (geo) | 20200510 |
| EPI_ISL_493086 | Spike | hCoV-19/USA/MO-WUSTL069/2020 | S | 689 | Q | 1 | 20200619 |
| EPI_ISL_483847 | Spike | hCoV-19/India/GJ-GBRC257b/2020 | Q | 690 | H | 46 (geo) | 20200612 |
| EPI_ISL_486477 | Spike | hCoV-19/Switzerland/ZH-ETHZ-110044/2020 | Q | 690 | R | 48 (geo) | 20200401 |
| EPI_ISL_514308 | Spike | hCoV-19/Israel/CVL-n14268/2020 | Q | 690 | L | 10 (geo) | 20200317 |
| EPI_ISL_465379 | Spike | hCoV-19/England/20174001604/2020 | Q | 690 | K | 2 (geo) | 20200421 |
| EPI_ISL_437010 | Spike | hCoV-19/Denmark/ALAB-SSI-634/2020 | S | 691 | F | 70 (geo) | 20200326 |
| EPI_ISL_706865 | Spike | hCoV-19/England/PORT-2D4CC3/2020 | S | 691 | A | 68 (geo) | 20200000 |
| EPI_ISL_579480 | Spike | hCoV-19/New Zealand/20VR3194/2020 | S | 691 | P | 8 (geo) | 20200326 |
| EPI_ISL_638027 | Spike | hCoV-19/England/CAMB-1B7438/2020 | S | 691 | Y | 3 (geo) | 20201020 |
| EPI_ISL_867657 | Spike | hCoV-19/Wales/PHWC-4B9697/2021 | S | 691 | C | 1 | 20210113 |
| EPI_ISL_616802 | Spike | hCoV-19/Denmark/DCGC-3024/2020 | I | 692 | V | 14 (geo) | 20200824 |
| EPI_ISL_805437 | Spike | hCoV-19/Canada/AB-36244/2020 | I | 692 | F | 8 (geo) | 20200323 |
| EPI_ISL_784828 | Spike | hCoV-19/USA/TX-HMH-MCoV-18480/2020 | I | 692 | T | 1 | 20201120 |
| EPI_ISL_693681 | Spike | hCoV-19/Czech Republic/NRL-10549/2020 | I | 692 | L | 1 | 20201029 |
| EPI_ISL_532980 | Spike | hCoV-19/England/QEUH-7532A7/2020 | I | 693 | V | 5 (geo) | 20200719 |
| EPI_ISL_753547 | Spike | hCoV-19/USA/CA-CHLA-PLM05944876/2020 | I | 693 | F | 1 | 20201130 |
| EPI_ISL_775257 | Spike | hCoV-19/Italy/CAM-INTPas-19/2020 | A | 694 | V | 31 (geo) | 20200330 |
| EPI_ISL_457275 | Spike | hCoV-19/England/LOND-D58EE/2020 | A | 694 | T | 3 (geo) | 20200417 |
| EPI_ISL_600461 | Spike | hCoV-19/Bangladesh/G-115/2020 | A | 694 | N | 1 | 20200620 |
| EPI_ISL_775673 | Spike | hCoV-19/Germany/HH-hpi-p1653/2020 | A | 694 | S | 7 (geo) | 20200317 |
| EPI_ISL_627177 | Spike | hCoV-19/England/LIVE-DA7B49/2020 | A | 694 | F | 9 (geo) | 20201004 |
| EPI_ISL_788099 | Spike | hCoV-19/USA/TX-HMH-MCoV-12947/2020 | A | 694 | G | 1 | 20200818 |
| EPI_ISL_775852 | Spike | hCoV-19/Germany/HH-hpi-p1413/2020 | Y | 695 | H | 2 (geo) | 20200309 |
| EPI_ISL_591320 | Spike | hCoV-19/Iran/K1r-112/2020 | Y | 695 | N | 3 (geo) | 20200500 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | Y | 695 | D | 1 | 20200422 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | Y | 695 | L | 1 | 20201221 |
| EPI_ISL_429691 | Spike | hCoV-19/Brazil/MG-CV35/2020 | Y | 695 | S | 1 | 20200318 |
| EPI_ISL_600461 | Spike | hCoV-19/Bangladesh/G-115/2020 | T | 696 | Q | 1 | 20200620 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | T | 696 | A | 2 (geo) | 20200422 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | T | 696 | H | 1 | 20201221 |
| EPI_ISL_600439 | Spike | hCoV-19/Bangladesh/29156/2020 | T | 696 | S | 1 | 20200405 |
| EPI_ISL_638301 | Spike | hCoV-19/England/CAMB-1B70AD/2020 | M | 697 | I | 10 (geo) | 20200000 |
| EPI_ISL_415618 | Spike | hCoV-19/USA/WA-UW53/2020 | M | 697 | T | 4 (geo) | 20200309 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | M | 697 | K | 1 | 20200422 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | M | 697 | Y | 1 | 20201221 |
| EPI_ISL_640800 | Spike | hCoV-19/Australia/VIC12494/2020 | S | 698 | L | 332 (geo) | 20200000 |
| EPI_ISL_465965 | Spike | hCoV-19/England/20142136304/2020 | S | 698 | A | 8 (geo) | 20200330 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | S | 698 | V | 1 | 20201221 |
| EPI_ISL_577376 | Spike | hCoV-19/Scotland/QEUH-9D1096/2020 | L | 699 | I | 18 (geo) | 20200916 |
| EPI_ISL_780297 | Spike | hCoV-19/USA/TX-HMH-MCoV-9831/2020 | L | 699 | F | 3 (geo) | 20200706 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | L | 699 | T | 1 | 20201221 |
| EPI_ISL_552446 | Spike | hCoV-19/England/ALDP-982999/2020 | L | 699 | V | 1 | 20200810 |
| EPI_ISL_785263 | Spike | hCoV-19/USA/TX-HMH-MCoV-18981/2020 | G | 700 | S | 1 | 20201125 |
| EPI_ISL_482572 | Spike | hCoV-19/India/DL-NCDC3788-CSIR-IGIB/2020 | G | 700 | A | 1 | 20200520 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | G | 700 | V | 3 (geo) | 20200422 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | G | 700 | W | 1 | 20201221 |
| EPI_ISL_853768 | Spike | hCoV-19/Austria/CeMM1952/2020 | A | 701 | V | 1164 (geo) | 20200000 |
| EPI_ISL_524739 | Spike | hCoV-19/India/GJ-GBRC-380a/2020 | A | 701 | T | 23 (geo) | 20200618 |
| EPI_ISL_766526 | Spike | hCoV-19/England/205260404/2020 | A | 701 | S | 52 (geo) | 20200000 |
| EPI_ISL_832021 | Spike | hCoV-19/USA/CA-SC210023/2020 | A | 701 | E | 1 | 20201216 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | A | 701 | C | 1 | 20201221 |
| EPI_ISL_604296 | Spike | hCoV-19/USA/CA-QDX-1984/2020 | E | 702 | Q | 31 (geo) | 20200317 |
| EPI_ISL_788064 | Spike | hCoV-19/USA/TX-HMH-MCoV-12912/2020 | E | 702 | G | 1 | 20200818 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | E | 702 | K | 5 (geo) | 20200510 |
| EPI_ISL_691791 | Spike | hCoV-19/Japan/PG-3535/2020 | E | 702 | D | 9 (geo) | 20200600 |
| EPI_ISL_736938 | Spike | hCoV-19/South Africa/KRISP-EC-MDSH924786/2020 | E | 702 | V | 1 | 20201207 |
| EPI_ISL_793263 | Spike | hCoV-19/Denmark/DCGC-23277/2020 | E | 702 | R | 1 | 20201221 |
| EPI_ISL_416355 | Spike | hCoV-19/Shanghai/SH0047/2020 | N | 703 | S | 4 (geo) | 20200204 |
| EPI_ISL_491366 | Spike | hCoV-19/USA/WI-UW-685/2020 | N | 703 | D | 1 | 20200625 |
| EPI_ISL_843167 | Spike | hCoV-19/Northern Ireland/NIRE-235C39/2020 | N | 703 | T | 10 (geo) | 20201221 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | N | 703 | I | 1 | 20201200 |
| EPI_ISL_415580 | Spike | hCoV-19/Canada/BC_17397/2020 | S | 704 | L | 135 (geo) | 20200228 |
| EPI_ISL_660434 | Spike | hCoV-19/Russia/MOS-CRIE-4974299/2020 | S | 704 | A | 7 (geo) | 20200715 |
| EPI_ISL_496674 | Spike | hCoV-19/Panama/330779/2020 | S | 704 | P | 8 (geo) | 20200318 |
| EPI_ISL_698295 | Spike | hCoV-19/United Arab Emirates/0105/2020 | S | 704 | T | 1 | 20200515 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | S | 704 | Q | 1 | 20201200 |
| EPI_ISL_494776 | Spike | hCoV-19/Italy/CAM-INTPas-13/2020 | V | 705 | F | 20 (geo) | 20200000 |
| EPI_ISL_672605 | Spike | hCoV-19/Iran/SA-Isf-51-2/2020 | V | 705 | L | 21 (geo) | 20200610 |
| EPI_ISL_596379 | Spike | hCoV-19/Iran/K1r-7/2020 | V | 705 | I | 5 (geo) | 20200300 |
| EPI_ISL_803003 | Spike | hCoV-19/USA/CA-QDX-2767/2020 | V | 705 | A | 1 | 20201226 |
| EPI_ISL_417020 | Spike | hCoV-19/Belgium/ULG-6939/2020 | A | 706 | V | 346 (geo) | 20200315 |
| EPI_ISL_862273 | Spike | hCoV-19/India/AP-CS0339/2020 | A | 706 | P | 5 (geo) | 20200704 |
| EPI_ISL_584667 | Spike | hCoV-19/England/LOND-124E1E0/2020 | A | 706 | S | 47 (geo) | 20200000 |
| EPI_ISL_582007 | Spike | hCoV-19/Iran/SA-Isf-61/2020 | A | 706 | R | 1 | 20200513 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | A | 706 | L | 1 | 20201200 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | Y | 707 | N | 1 | 20200422 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | Y | 707 | T | 1 | 20201200 |
| EPI_ISL_490552 | Spike | hCoV-19/England/NORW-EE536/2020 | S | 708 | F | 23 (geo) | 20200000 |
| EPI_ISL_788834 | Spike | hCoV-19/USA/TX-HMH-MCoV-13741/2020 | S | 708 | Y | 1 | 20200817 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | S | 708 | A | 3 (geo) | 20200422 |
| EPI_ISL_778874 | Spike | hCoV-19/USA/MD-MDH-0493/2020 | S | 708 | T | 2 (geo) | 20201202 |
| EPI_ISL_605369 | Spike | hCoV-19/USA/UT-UPHL-2009695/2020 | S | 708 | C | 1 | 20200727 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | S | 708 | L | 1 | 20201200 |
| EPI_ISL_546327 | Spike | hCoV-19/USA/TX-HMH-6893/2020 | S | 708 | P | 1 | 20200625 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | N | 709 | K | 4 (geo) | 20200422 |
| EPI_ISL_605166 | Spike | hCoV-19/USA/UT-UPHL-2009482/2020 | N | 709 | Y | 8 (geo) | 20200718 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | N | 709 | I | 2 (geo) | 20201200 |
| EPI_ISL_515393 | Spike | hCoV-19/USA/NV-NSPHL-A0122/2020 | N | 709 | D | 1 | 20200426 |
| EPI_ISL_560574 | Spike | hCoV-19/France/CVL-8278/2020 | N | 710 | S | 22 (geo) | 20200325 |
| EPI_ISL_841896 | Spike | hCoV-19/England/PORT-2E1C69/2020 | N | 710 | H | 13 (geo) | 20200000 |
| EPI_ISL_756664 | Spike | hCoV-19/England/ALDP-C8B8AF/2020 | N | 710 | K | 2 (geo) | 20201216 |
| EPI_ISL_799006 | Spike | hCoV-19/England/QEUH-D51E54/2020 | N | 710 | D | 2 (geo) | 20201229 |
| EPI_ISL_447386 | Spike | hCoV-19/Israel/2047749/2020 | N | 710 | T | 4 (geo) | 20200330 |
| EPI_ISL_476558 | Spike | hCoV-19/Senegal/64166/2020 | S | 711 | F | 8 (geo) | 20200612 |
| EPI_ISL_577880 | Spike | hCoV-19/Netherlands/un-EMC-784/2020 | S | 711 | A | 2 (geo) | 20200612 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | S | 711 | L | 1 | 20201200 |
| EPI_ISL_590552 | Spike | hCoV-19/England/QEUH-9B762B/2020 | I | 712 | V | 6 (geo) | 20200904 |
| EPI_ISL_844013 | Spike | hCoV-19/Denmark/DCGC-29966/2020 | I | 712 | F | 1 | 20201228 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | I | 712 | L | 1 | 20201200 |
| EPI_ISL_456418 | Spike | hCoV-19/Australia/VIC1380/2020 | A | 713 | C | 1 | 20200414 |
| EPI_ISL_648100 | Spike | hCoV-19/Singapore/1172/2020 | A | 713 | S | 3 (geo) | 20200411 |
| EPI_ISL_788750 | Spike | hCoV-19/USA/TX-HMH-MCoV-13648/2020 | A | 713 | V | 1 | 20200820 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | A | 713 | P | 1 | 20201200 |
| EPI_ISL_641323 | Spike | hCoV-19/India/DL-IGIB-1130005/2020 | A | 713 | D | 1 | 20200500 |
| EPI_ISL_494512 | Spike | hCoV-19/USA/IL-QDX-176/2020 | I | 714 | M | 1 | 20200428 |
| EPI_ISL_456418 | Spike | hCoV-19/Australia/VIC1380/2020 | I | 714 | H | 1 | 20200414 |
| EPI_ISL_422019 | Spike | hCoV-19/Wales/PHWC-265E7/2020 | I | 714 | L | 6 (geo) | 20200327 |
| EPI_ISL_513130 | Spike | hCoV-19/SaudiArabia/KAUST-MADINAH343/2020 | I | 714 | Y | 2 (geo) | 20200424 |
| EPI_ISL_638809 | Spike | hCoV-19/England/QEUH-A79545/2020 | I | 714 | V | 2 (geo) | 20201010 |
| EPI_ISL_494447 | Spike | hCoV-19/USA/CA-ALSR-1223/2020 | P | 715 | S | 5 (geo) | 20200410 |
| EPI_ISL_435059 | Spike | hCoV-19/South Africa/R05475/2020 | P | 715 | T | 5 (geo) | 20200320 |
| EPI_ISL_419246 | Spike | hCoV-19/Hong Kong/HKPU76-0802/2020 | P | 715 | H | 1 | 20200223 |
| EPI_ISL_766219 | Spike | hCoV-19/England/205261952/2020 | T | 716 | I | 30753 (geo) | 20200000 |
| EPI_ISL_568484 | Spike | hCoV-19/Iran/K1r-6/2020 | T | 716 | P | 1 | 20200322 |
| EPI_ISL_456418 | Spike | hCoV-19/Australia/VIC1380/2020 | T | 716 | H | 1 | 20200414 |
| EPI_ISL_724909 | Spike | hCoV-19/England/NORT-1B72A3A/2020 | T | 716 | V | 1 | 20201206 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | T | 716 | Q | 1 | 20201200 |
| EPI_ISL_456418 | Spike | hCoV-19/Australia/VIC1380/2020 | N | 717 | K | 2 (geo) | 20200414 |
| EPI_ISL_435523 | Spike | hCoV-19/USA/NY-NYUMC457/2020 | N | 717 | T | 7 (geo) | 20200420 |
| EPI_ISL_497808 | Spike | hCoV-19/Hong Kong/HKU-200723-041/2020 | N | 717 | S | 22 (geo) | 20200322 |
| EPI_ISL_837451 | Spike | hCoV-19/Italy/CAM-TIGEM-1283/2020 | N | 717 | H | 2 (geo) | 20201201 |
| EPI_ISL_805869 | Spike | hCoV-19/Canada/AB-26007/2020 | N | 717 | Y | 2 (geo) | 20200322 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | N | 717 | V | 1 | 20200422 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | N | 717 | I | 1 | 20201200 |
| EPI_ISL_600541 | Spike | hCoV-19/Bangladesh/G-218/2020 | F | 718 | V | 4 (geo) | 20200520 |
| EPI_ISL_711263 | Spike | hCoV-19/Denmark/DCGC-14719/2020 | F | 718 | S | 1 | 20201123 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | F | 718 | L | 1 | 20201200 |
| EPI_ISL_766322 | Spike | hCoV-19/Gibraltar/205121192/2020 | T | 719 | I | 105 (geo) | 20200000 |
| EPI_ISL_600541 | Spike | hCoV-19/Bangladesh/G-218/2020 | T | 719 | S | 7 (geo) | 20200520 |
| EPI_ISL_456418 | Spike | hCoV-19/Australia/VIC1380/2020 | T | 719 | Y | 1 | 20200414 |
| EPI_ISL_414527 | Spike | hCoV-19/Hong Kong/VM20002493-2/2020 | T | 719 | A | 1 | 20200209 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | T | 719 | L | 1 | 20201200 |
| EPI_ISL_416752 | Spike | hCoV-19/France/ARA-650/2020 | I | 720 | V | 9 (geo) | 20200304 |
| EPI_ISL_456418 | Spike | hCoV-19/Australia/VIC1380/2020 | I | 720 | Y | 1 | 20200414 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | I | 720 | K | 1 | 20200422 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | I | 720 | L | 1 | 20201200 |
| EPI_ISL_524773 | Spike | hCoV-19/USA/UT-08716/2020 | S | 721 | G | 7 (geo) | 20200519 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | S | 721 | I | 3 (geo) | 20200422 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | S | 721 | T | 2 (geo) | 20200510 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | S | 721 | V | 1 | 20201200 |
| EPI_ISL_537350 | Spike | hCoV-19/Spain/CL-IBV-97006204/2020 | V | 722 | F | 2 (geo) | 20200413 |
| EPI_ISL_600541 | Spike | hCoV-19/Bangladesh/G-218/2020 | V | 722 | T | 4 (geo) | 20200520 |
| EPI_ISL_591063 | Spike | hCoV-19/Iran/SA-Isf-8/2020 | V | 722 | A | 3 (geo) | 20200510 |
| EPI_ISL_482479 | Spike | hCoV-19/Canada/NL_72/2020 | V | 722 | I | 4 (geo) | 20200319 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | V | 722 | L | 1 | 20201200 |
| EPI_ISL_649929 | Spike | hCoV-19/England/204742226/2020 | T | 723 | I | 977 (geo) | 20200000 |
| EPI_ISL_493337 | Spike | hCoV-19/Mexico/TAB-InDRE-22/2020 | T | 723 | L | 1 | 20200426 |
| EPI_ISL_600541 | Spike | hCoV-19/Bangladesh/G-218/2020 | T | 723 | S | 4 (geo) | 20200520 |
| EPI_ISL_709405 | Spike | hCoV-19/England/ALDP-C0654B/2020 | T | 723 | A | 1 | 20201205 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | T | 723 | P | 1 | 20201200 |
| EPI_ISL_435059 | Spike | hCoV-19/South Africa/R05475/2020 | T | 723 | N | 2 (geo) | 20200320 |
| EPI_ISL_727426 | Spike | hCoV-19/Wales/PHWC-499C9B/2020 | T | 724 | S | 3 (geo) | 20201203 |
| EPI_ISL_433935 | Spike | hCoV-19/England/CAMB-7B291/2020 | T | 724 | I | 4 (geo) | 20200412 |
| EPI_ISL_528118 | Spike | hCoV-19/Switzerland/BS-UHB-42191965/2020 | T | 724 | A | 10 (geo) | 20200315 |
| EPI_ISL_513459 | Spike | hCoV-19/USA/ME-HETL-J0048/2020 | T | 724 | K | 3 (geo) | 20200318 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | T | 724 | Q | 1 | 20201200 |
| EPI_ISL_479770 | Spike | hCoV-19/USA/FL-06-UMTL-A6U4/2020 | T | 724 | L | 1 | 20200415 |
| EPI_ISL_493337 | Spike | hCoV-19/Mexico/TAB-InDRE-22/2020 | E | 725 | T | 1 | 20200426 |
| EPI_ISL_561389 | Spike | hCoV-19/Australia/VIC8608/2020 | E | 725 | Q | 2 (geo) | 20200818 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | E | 725 | K | 4 (geo) | 20200510 |
| EPI_ISL_479770 | Spike | hCoV-19/USA/FL-06-UMTL-A6U4/2020 | E | 725 | L | 1 | 20200415 |
| EPI_ISL_493337 | Spike | hCoV-19/Mexico/TAB-InDRE-22/2020 | I | 726 | L | 1 | 20200426 |
| EPI_ISL_568484 | Spike | hCoV-19/Iran/K1r-6/2020 | I | 726 | F | 2 (geo) | 20200322 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | I | 726 | N | 1 | 20200907 |
| EPI_ISL_638861 | Spike | hCoV-19/England/QEUH-A8A936/2020 | I | 726 | T | 3 (geo) | 20201016 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | I | 726 | V | 1 | 20201023 |
| EPI_ISL_479770 | Spike | hCoV-19/USA/FL-06-UMTL-A6U4/2020 | I | 726 | K | 1 | 20200415 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | L | 727 | S | 1 | 20200907 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | L | 727 | P | 2 (geo) | 20200510 |
| EPI_ISL_435059 | Spike | hCoV-19/South Africa/R05475/2020 | L | 727 | I | 4 (geo) | 20200320 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | L | 727 | Y | 1 | 20201200 |
| EPI_ISL_653754 | Spike | hCoV-19/Colombia/DC-INS-3334/2020 | P | 728 | T | 3 (geo) | 20200902 |
| EPI_ISL_801549 | Spike | hCoV-19/Chile/Santiago-PUC_MVL_0012/2020 | P | 728 | S | 3 (geo) | 20200318 |
| EPI_ISL_583812 | Spike | hCoV-19/Austria/CeMM0963/2020 | P | 728 | L | 5 (geo) | 20200329 |
| EPI_ISL_521513 | Spike | hCoV-19/Australia/VIC2671/2020 | P | 728 | R | 1 | 20200702 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | P | 728 | Q | 1 | 20201200 |
| EPI_ISL_479770 | Spike | hCoV-19/USA/FL-06-UMTL-A6U4/2020 | P | 728 | Y | 1 | 20200415 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | V | 729 | S | 1 | 20200907 |
| EPI_ISL_492496 | Spike | hCoV-19/England/LOND-D7EAE/2020 | V | 729 | A | 4 (geo) | 20200416 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | V | 729 | M | 1 | 20200422 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | V | 729 | C | 1 | 20201200 |
| EPI_ISL_479770 | Spike | hCoV-19/USA/FL-06-UMTL-A6U4/2020 | V | 729 | F | 1 | 20200415 |
| EPI_ISL_853975 | Spike | hCoV-19/Austria/CeMM1548/2020 | S | 730 | A | 1 | 20201102 |
| EPI_ISL_464626 | Spike | hCoV-19/England/20110002304/2020 | S | 730 | F | 1 | 20200308 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | S | 730 | V | 1 | 20200907 |
| EPI_ISL_710536 | Spike | hCoV-19/Gibraltar/205000668/2020 | S | 730 | L | 1 | 20201200 |
| EPI_ISL_424731 | Spike | hCoV-19/Mexico/CMX-IMSS_01/2020 | S | 730 | C | 1 | 20200313 |
| EPI_ISL_665745 | Spike | hCoV-19/England/PORT-2EA18F/2020 | M | 731 | I | 162 (geo) | 20200000 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | M | 731 | Y | 1 | 20200907 |
| EPI_ISL_479770 | Spike | hCoV-19/USA/FL-06-UMTL-A6U4/2020 | M | 731 | T | 3 (geo) | 20200415 |
| EPI_ISL_577606 | Spike | hCoV-19/Iran/SA-Isf-51/2020 | M | 731 | K | 2 (geo) | 20200510 |
| EPI_ISL_454522 | Spike | hCoV-19/India/MH-NIV-11676/2020 | M | 731 | R | 1 | 20200419 |
| EPI_ISL_786108 | Spike | hCoV-19/USA/TX-HMH-MCoV-17960/2020 | M | 731 | V | 1 | 20201116 |
| EPI_ISL_837628 | Spike | hCoV-19/Mexico/CMX-INER-0026/2020 | T | 732 | A | 570 (geo) | 20200404 |
| EPI_ISL_482771 | Spike | hCoV-19/Egypt/MASRI-025/2020 | T | 732 | S | 78 (geo) | 20200510 |
| EPI_ISL_413747 | Spike | hCoV-19/China/WF0017/2020 | T | 732 | H | 1 | 20200200 |
| EPI_ISL_456050 | Spike | hCoV-19/USA/NY-NYUMC814/2020 | T | 732 | I | 33 (geo) | 20200326 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | T | 732 | D | 1 | 20200907 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | T | 732 | N | 2 (geo) | 20200422 |
| EPI_ISL_479770 | Spike | hCoV-19/USA/FL-06-UMTL-A6U4/2020 | T | 732 | K | 1 | 20200415 |
| EPI_ISL_413747 | Spike | hCoV-19/China/WF0017/2020 | K | 733 | Q | 5 (geo) | 20200200 |
| EPI_ISL_672604 | Spike | hCoV-19/Iran/SA-Isf-59/2020 | K | 733 | N | 3 (geo) | 20200806 |
| EPI_ISL_560987 | Spike | hCoV-19/Sweden/20-52426/2020 | K | 733 | R | 3 (geo) | 20200717 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | T | 734 | D | 1 | 20200907 |
| EPI_ISL_784828 | Spike | hCoV-19/USA/TX-HMH-MCoV-18480/2020 | T | 734 | I | 1 | 20201120 |
| EPI_ISL_426784 | Spike | hCoV-19/Australia/VIC514/2020 | S | 735 | L | 12 (geo) | 20200323 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | S | 735 | I | 1 | 20200907 |
| EPI_ISL_490695 | Spike | hCoV-19/Scotland/CVR3899/2020 | S | 735 | A | 2 (geo) | 20200618 |
| EPI_ISL_691225 | Spike | hCoV-19/Japan/PG-3103/2020 | V | 736 | I | 3 (geo) | 20200400 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | V | 736 | S | 1 | 20200907 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | D | 737 | R | 1 | 20200907 |
| EPI_ISL_721915 | Spike | hCoV-19/Switzerland/VD-ETHZ-380202/2020 | D | 737 | E | 1 | 20201123 |
| EPI_ISL_528990 | Spike | hCoV-19/Italy/ABR-IZSGC-TE10002/2020 | D | 737 | Y | 7 (geo) | 20200401 |
| EPI_ISL_596228 | Spike | hCoV-19/Russia/SPE-RII-30769S/2020 | D | 737 | G | 2 (geo) | 20200820 |
| EPI_ISL_591063 | Spike | hCoV-19/Iran/SA-Isf-8/2020 | D | 737 | H | 1 | 20200510 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | C | 738 | L | 1 | 20200907 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | T | 739 | Y | 1 | 20200907 |
| EPI_ISL_688246 | Spike | hCoV-19/Japan/PG-7141/2020 | T | 739 | A | 3 (geo) | 20200800 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 739 | D | 1 | 20201023 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 739 | C | 1 | 20201023 |
| EPI_ISL_509412 | Spike | hCoV-19/Turkey/ACUTG-1/2020 | - | 739 | T | 2 (geo) | 20200413 |
| EPI_ISL_841933 | Spike | hCoV-19/England/PORT-2E221B/2020 | T | 739 | I | 2 (geo) | 20200000 |
| EPI_ISL_561342 | Spike | hCoV-19/India/HR-IMT-BZ98/2020 | T | 739 | S | 1 | 20200825 |
| EPI_ISL_509412 | Spike | hCoV-19/Turkey/ACUTG-1/2020 | - | 739 | S | 1 | 20200413 |
| EPI_ISL_509412 | Spike | hCoV-19/Turkey/ACUTG-1/2020 | - | 739 | Y | 1 | 20200413 |
| EPI_ISL_509412 | Spike | hCoV-19/Turkey/ACUTG-1/2020 | - | 739 | G | 1 | 20200413 |
| EPI_ISL_548695 | Spike | hCoV-19/Canada/ON-PHL-20-00012/2020 | M | 740 | I | 42 (geo) | 20200000 |
| EPI_ISL_720149 | Spike | hCoV-19/England/MILK-BB0532/2020 | M | 740 | L | 26 (geo) | 20201117 |
| EPI_ISL_678429 | Spike | hCoV-19/Belgium/ULG-10886/2020 | M | 740 | V | 27 (geo) | 20201113 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | M | 740 | N | 1 | 20200907 |
| EPI_ISL_429673 | Spike | hCoV-19/Brazil/MG-CV11/2020 | M | 740 | K | 2 (geo) | 20200316 |
| EPI_ISL_509412 | Spike | hCoV-19/Turkey/ACUTG-1/2020 | M | 740 | T | 1 | 20200413 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | Y | 741 | V | 1 | 20200907 |
| EPI_ISL_592926 | Spike | hCoV-19/Australia/VIC14633/2020 | Y | 741 | F | 1 | 20200811 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | Y | 741 | S | 1 | 20200422 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | I | 742 | H | 1 | 20200907 |
| EPI_ISL_610193 | Spike | hCoV-19/Hong Kong/HKPU-5010/2020 | I | 742 | F | 1 | 20200919 |
| EPI_ISL_818991 | Spike | hCoV-19/Denmark/DCGC-25955/2021 | I | 742 | V | 1 | 20210104 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | C | 743 | L | 1 | 20200907 |
| EPI_ISL_558161 | Spike | hCoV-19/England/ALDP-6446BD/2020 | C | 743 | R | 2 (geo) | 20200703 |
| EPI_ISL_603307 | Spike | hCoV-19/Switzerland/GR-ETHZ-300275/2020 | C | 743 | G | 1 | 20201001 |
| EPI_ISL_471420 | Spike | hCoV-19/Romania/Bucuresti-293034/2020 | G | 744 | S | 11 (geo) | 20200604 |
| EPI_ISL_615462 | Spike | hCoV-19/Denmark/DCGC-3687/2020 | G | 744 | W | 1 | 20200907 |
| EPI_ISL_766789 | Spike | hCoV-19/USA/WY-WPHL-20168339/2020 | G | 744 | C | 1 | 20201218 |
| EPI_ISL_483417 | Spike | hCoV-19/USA/CA-ALSR-0926-IPL/2020 | G | 744 | V | 3 (geo) | 20200427 |
| EPI_ISL_498558 | Spike | hCoV-19/Italy/FVG-ICGEB-S208/2020 | G | 744 | D | 2 (geo) | 20200700 |
| EPI_ISL_429570 | Spike | hCoV-19/Denmark/ALAB-SSI495/2020 | D | 745 | G | 29 (geo) | 20200324 |
| EPI_ISL_468096 | Spike | hCoV-19/USA/OR-OHSU-0079/2020 | D | 745 | E | 2 (geo) | 20200424 |
| EPI_ISL_495408 | Spike | hCoV-19/USA/FL-BPHL-0502/2020 | D | 745 | H | 1 | 20200603 |
| EPI_ISL_671915 | Spike | hCoV-19/Ireland/LK-NVRL-75IRL23376/2020 | D | 745 | A | 4 (geo) | 20201006 |
| EPI_ISL_542867 | Spike | hCoV-19/USA/TX-HMH-1826/2020 | S | 746 | P | 1 | 20200516 |
| EPI_ISL_584664 | Spike | hCoV-19/England/LOND-124E195/2020 | T | 747 | I | 105 (geo) | 20200000 |
| EPI_ISL_849109 | Spike | hCoV-19/USA/FL-BPHL-2414/2020 | T | 747 | S | 3 (geo) | 20200731 |
| EPI_ISL_457458 | Spike | hCoV-19/England/NORW-EB94C/2020 | T | 747 | N | 4 (geo) | 20200508 |
| EPI_ISL_425244 | Spike | hCoV-19/England/CAMB-7381F/2020 | T | 747 | A | 2 (geo) | 20200401 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | T | 747 | P | 2 (geo) | 20200422 |
| EPI_ISL_602706 | Spike | hCoV-19/South Africa/KRISP-K002894/2020 | E | 748 | Q | 17 (geo) | 20200901 |
| EPI_ISL_542928 | Spike | hCoV-19/USA/TX-HMH-1972/2020 | E | 748 | K | 3 (geo) | 20200519 |
| EPI_ISL_463893 | Spike | hCoV-19/Bosnia and Herzegovina/03_Tuzla/2020 | S | 750 | N | 10 (geo) | 20200525 |
| EPI_ISL_450423 | Spike | hCoV-19/Anhui/MAS005/2020 | S | 750 | R | 2 (geo) | 20200123 |
| EPI_ISL_839456 | Spike | hCoV-19/England/MILK-B5ABB0/2020 | S | 750 | G | 1 | 20201106 |
| EPI_ISL_582010 | Spike | hCoV-19/Iran/SA-Isf-66/2020 | S | 750 | T | 1 | 20200806 |
| EPI_ISL_450427 | Spike | hCoV-19/Anhui/MAS635/2020 | S | 750 | I | 1 | 20200218 |
| EPI_ISL_517791 | Spike | hCoV-19/USA/FL-BPHL-0901/2020 | N | 751 | K | 9 (geo) | 20200612 |
| EPI_ISL_596515 | Spike | hCoV-19/Palestine/30/2020 | N | 751 | Y | 24 (geo) | 20200331 |
| EPI_ISL_541928 | Spike | hCoV-19/Spain/MD-IBV-99007158/2020 | N | 751 | S | 6 (geo) | 20200817 |
| EPI_ISL_780740 | Spike | hCoV-19/USA/TX-HMH-MCoV-8764/2020 | N | 751 | T | 1 | 20200701 |
| EPI_ISL_449998 | Spike | hCoV-19/USA/WA-S828/2020 | N | 751 | D | 6 (geo) | 20200416 |
| EPI_ISL_594216 | Spike | hCoV-19/USA/MI-MDHHS-SC22104/2020 | N | 751 | I | 3 (geo) | 20200512 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | L | 752 | P | 2 (geo) | 20200327 |
| EPI_ISL_640437 | Spike | hCoV-19/Australia/VIC12121/2020 | L | 752 | F | 19 (geo) | 20200000 |
| EPI_ISL_450423 | Spike | hCoV-19/Anhui/MAS005/2020 | L | 752 | R | 2 (geo) | 20200123 |
| EPI_ISL_470082 | Spike | hCoV-19/Northern Ireland/NIRE-FC034/2020 | L | 752 | I | 3 (geo) | 20200413 |
| EPI_ISL_600461 | Spike | hCoV-19/Bangladesh/G-115/2020 | L | 753 | I | 1 | 20200620 |
| EPI_ISL_710035 | Spike | hCoV-19/USA/MI-UM-10036783209/2020 | L | 753 | V | 1 | 20201104 |
| EPI_ISL_494386 | Spike | hCoV-19/USA/CA-ALSR-1141/2020 | L | 754 | F | 17 (geo) | 20200416 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | Q | 755 | R | 1 | 20200422 |
| EPI_ISL_763178 | Spike | hCoV-19/Netherlands/un-EMC-825/2020 | Q | 755 | L | 1 | 20201211 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | Y | 756 | K | 1 | 20200327 |
| EPI_ISL_432582 | Spike | hCoV-19/England/SHEF-CF049/2020 | Y | 756 | I | 1 | 20200406 |
| EPI_ISL_432582 | Spike | hCoV-19/England/SHEF-CF049/2020 | G | 757 | W | 1 | 20200406 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | G | 757 | T | 1 | 20200501 |
| EPI_ISL_543151 | Spike | hCoV-19/USA/TX-HMH-3739/2020 | G | 757 | V | 1 | 20200615 |
| EPI_ISL_568496 | Spike | hCoV-19/Iran/K1r-32/2020 | S | 758 | I | 5 (geo) | 20200224 |
| EPI_ISL_582015 | Spike | hCoV-19/Iran/SA-Isf-67/2020 | S | 758 | T | 2 (geo) | 20200510 |
| EPI_ISL_479573 | Spike | hCoV-19/India/MH-NIV-SARI-4487/2020 | S | 758 | C | 1 | 20200412 |
| EPI_ISL_432582 | Spike | hCoV-19/England/SHEF-CF049/2020 | S | 758 | Q | 1 | 20200406 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | S | 758 | A | 1 | 20200501 |
| EPI_ISL_793013 | Spike | hCoV-19/Argentina/PAIS-A0010/2020 | F | 759 | L | 2 (geo) | 20200331 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | F | 759 | G | 1 | 20200501 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | C | 760 | L | 3 (geo) | 20200327 |
| EPI_ISL_480613 | Spike | hCoV-19/Australia/VIC963/2020 | C | 760 | Y | 1 | 20200327 |
| EPI_ISL_788628 | Spike | hCoV-19/USA/TX-HMH-MCoV-13499/2020 | C | 760 | S | 1 | 20200821 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | C | 760 | F | 1 | 20200501 |
| EPI_ISL_529614 | Spike | hCoV-19/England/BIRM-61E9A/2020 | T | 761 | I | 12 (geo) | 20200326 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | T | 761 | Y | 3 (geo) | 20200327 |
| EPI_ISL_494462 | Spike | hCoV-19/USA/CA-ALSR-1261/2020 | T | 761 | A | 1 | 20200505 |
| EPI_ISL_801866 | Spike | hCoV-19/USA/NY-MSHSPSP-PV17752/2020 | T | 761 | R | 3 (geo) | 20200907 |
| EPI_ISL_455770 | Spike | hCoV-19/India/OR-RMRC171/2020 | T | 761 | S | 1 | 20200507 |
| EPI_ISL_466187 | Spike | hCoV-19/England/20149035404/2020 | T | 761 | P | 1 | 20200403 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | Q | 762 | T | 3 (geo) | 20200327 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | Q | 762 | L | 1 | 20200422 |
| EPI_ISL_647980 | Spike | hCoV-19/Zimbabwe/ZW-6970/2020 | Q | 762 | K | 1 | 20200501 |
| EPI_ISL_617384 | Spike | hCoV-19/Denmark/DCGC-1725/2020 | L | 763 | S | 1 | 20200504 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | L | 763 | I | 4 (geo) | 20200327 |
| EPI_ISL_516934 | Spike | hCoV-19/Moldova/ICGEB_MD1/2020 | L | 763 | V | 1 | 20200618 |
| EPI_ISL_785917 | Spike | hCoV-19/USA/TX-HMH-MCoV-16233/2020 | L | 763 | F | 1 | 20201031 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | N | 764 | K | 5 (geo) | 20200327 |
| EPI_ISL_794146 | Spike | hCoV-19/USA/NY-Wadsworth-21000052-01/2020 | N | 764 | S | 1 | 20201226 |
| EPI_ISL_425564 | Spike | hCoV-19/England/NOTT-10E599/2020 | R | 765 | C | 64 (geo) | 20200325 |
| EPI_ISL_724333 | Spike | hCoV-19/England/EXET-13E5CD/2020 | R | 765 | L | 87 (geo) | 20200000 |
| EPI_ISL_424537 | Spike | hCoV-19/Iceland/515/2020 | R | 765 | H | 17 (geo) | 20200300 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | R | 765 | P | 4 (geo) | 20200327 |
| EPI_ISL_486146 | Spike | hCoV-19/USA/CA-CZB-1830/2020 | R | 765 | S | 1 | 20200424 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | A | 766 | C | 4 (geo) | 20200327 |
| EPI_ISL_787123 | Spike | hCoV-19/USA/TX-HMH-MCoV-13830/2020 | A | 766 | V | 1 | 20200817 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | L | 767 | F | 4 (geo) | 20200327 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | L | 767 | V | 1 | 20200422 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | T | 768 | N | 10 (geo) | 20200327 |
| EPI_ISL_427212 | Spike | hCoV-19/USA/WA-UW-3935/2020 | T | 768 | I | 1 | 20200327 |
| EPI_ISL_856564 | Spike | hCoV-19/Denmark/DCGC-32148/2021 | T | 768 | A | 1 | 20210104 |
| EPI_ISL_591063 | Spike | hCoV-19/Iran/SA-Isf-8/2020 | T | 768 | P | 1 | 20200510 |
| EPI_ISL_845545 | Spike | hCoV-19/Cameroon/CV434/2020 | G | 769 | V | 845 (geo) | 20200000 |
| EPI_ISL_433012 | Spike | hCoV-19/England/NOTT-10F4F5/2020 | G | 769 | R | 12 (geo) | 20200402 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | G | 769 | W | 4 (geo) | 20200327 |
| EPI_ISL_455464 | Spike | hCoV-19/Fuzhou/JX2009/2020 | G | 769 | A | 18 (geo) | 20200205 |
| EPI_ISL_591063 | Spike | hCoV-19/Iran/SA-Isf-8/2020 | G | 769 | E | 1 | 20200510 |
| EPI_ISL_448757 | Spike | hCoV-19/England/OXON-AEB12/2020 | I | 770 | V | 28 (geo) | 20200000 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | I | 770 | L | 1 | 20200327 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | I | 770 | N | 4 (geo) | 20200327 |
| EPI_ISL_861867 | Spike | hCoV-19/Brazil/SP-HIAE-ID01/2020 | I | 770 | M | 1 | 20200424 |
| EPI_ISL_725406 | Spike | hCoV-19/England/NORW-F98D5/2020 | A | 771 | S | 259 (geo) | 20200000 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | A | 771 | P | 1 | 20200327 |
| EPI_ISL_437331 | Spike | hCoV-19/Turkey/HSGM-1014/2020 | A | 771 | V | 11 (geo) | 20200325 |
| EPI_ISL_522349 | Spike | hCoV-19/Belgium/rega-0309752/2020 | A | 771 | T | 2 (geo) | 20200309 |
| EPI_ISL_602685 | Spike | hCoV-19/South Africa/KRISP-K002872/2020 | A | 771 | D | 4 (geo) | 20200905 |
| EPI_ISL_479573 | Spike | hCoV-19/India/MH-NIV-SARI-4487/2020 | A | 771 | L | 1 | 20200412 |
| EPI_ISL_740989 | Spike | hCoV-19/England/CAMB-1BD906/2020 | V | 772 | I | 518 (geo) | 20200000 |
| EPI_ISL_662834 | Spike | hCoV-19/England/QEUH-AEFBC0/2020 | V | 772 | G | 7 (geo) | 20201029 |
| EPI_ISL_421871 | Spike | hCoV-19/England/20139010404/2020 | V | 772 | C | 4 (geo) | 20200327 |
| EPI_ISL_432320 | Spike | hCoV-19/Wales/PHWC-2ADCD/2020 | V | 772 | A | 5 (geo) | 20200406 |
| EPI_ISL_593755 | Spike | hCoV-19/Australia/NSW1024/2020 | V | 772 | F | 19 (geo) | 20200327 |
| EPI_ISL_414556 | Spike | hCoV-19/Netherlands/ZuidHolland_2/2020 | V | 772 | L | 1 | 20200306 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | E | 773 | D | 4 (geo) | 20200408 |
| EPI_ISL_479573 | Spike | hCoV-19/India/MH-NIV-SARI-4487/2020 | E | 773 | Q | 2 (geo) | 20200412 |
| EPI_ISL_539531 | Spike | hCoV-19/Spain/CN-ISCIII-201048/2020 | E | 773 | V | 2 (geo) | 20200224 |
| EPI_ISL_635411 | Spike | hCoV-19/USA/CA-ALSR-2286/2020 | E | 773 | G | 2 (geo) | 20200708 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | Q | 774 | H | 2 (geo) | 20200327 |
| EPI_ISL_507007 | Spike | hCoV-19/Iran/IRVSH-01/2020 | Q | 774 | R | 1 | 20200501 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | Q | 774 | K | 2 (geo) | 20200408 |
| EPI_ISL_789993 | Spike | hCoV-19/USA/TX-HMH-MCoV-12825/2020 | D | 775 | Y | 2 (geo) | 20200819 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | D | 775 | N | 1 | 20200327 |
| EPI_ISL_508064 | Spike | hCoV-19/USA/NM-UNM-00392/2020 | D | 775 | G | 2 (geo) | 20200504 |
| EPI_ISL_413696 | Spike | hCoV-19/China/WF0009/2020 | D | 775 | E | 1 | 20200100 |
| EPI_ISL_656314 | Spike | hCoV-19/England/ALDP-B45DC1/2020 | K | 776 | R | 10 (geo) | 20201107 |
| EPI_ISL_429677 | Spike | hCoV-19/Brazil/MG-CV17/2020 | K | 776 | T | 1 | 20200311 |
| EPI_ISL_724683 | Spike | hCoV-19/England/LOND-DAA2F/2020 | K | 776 | E | 1 | 20201103 |
| EPI_ISL_765479 | Spike | hCoV-19/France/GES-IPP10968/2020 | N | 777 | K | 1 | 20201218 |
| EPI_ISL_519962 | Spike | hCoV-19/Australia/VIC5197/2020 | T | 778 | I | 162 (geo) | 20200000 |
| EPI_ISL_440371 | Spike | hCoV-19/England/CAMB-7424D/2020 | T | 778 | A | 5 (geo) | 20200320 |
| EPI_ISL_451347 | Spike | hCoV-19/Sichuan/SC-PHCC1-026/2020 | T | 778 | N | 6 (geo) | 20200220 |
| EPI_ISL_765479 | Spike | hCoV-19/France/GES-IPP10968/2020 | T | 778 | H | 1 | 20201218 |
| EPI_ISL_458181 | Spike | hCoV-19/Belgium/Rega-0327211/2020 | T | 778 | S | 1 | 20200327 |
| EPI_ISL_496747 | Spike | hCoV-19/Panama/333567/2020 | Q | 779 | R | 10 (geo) | 20200318 |
| EPI_ISL_464792 | Spike | hCoV-19/England/201160261/2020 | Q | 779 | K | 15 (geo) | 20200311 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | Q | 779 | P | 2 (geo) | 20200327 |
| EPI_ISL_480298 | Spike | hCoV-19/Bulgaria/15/2020 | Q | 779 | L | 50 (geo) | 20200513 |
| EPI_ISL_684148 | Spike | hCoV-19/Japan/PG-0240/2020 | Q | 779 | H | 26 (geo) | 20200300 |
| EPI_ISL_423946 | Spike | hCoV-19/England/20128017504/2020 | Q | 779 | E | 1 | 20200319 |
| EPI_ISL_414521 | Spike | hCoV-19/Germany/BY-BIM-Pat3/2020 | E | 780 | Q | 424 (geo) | 20200302 |
| EPI_ISL_591063 | Spike | hCoV-19/Iran/SA-Isf-8/2020 | E | 780 | K | 8 (geo) | 20200510 |
| EPI_ISL_812199 | Spike | hCoV-19/USA/NM-CDC-KCDB-3705/2020 | E | 780 | D | 13 (geo) | 20200310 |
| EPI_ISL_450053 | Spike | hCoV-19/USA/NY-PV09368/2020 | E | 780 | V | 2 (geo) | 20200317 |
| EPI_ISL_621147 | Spike | hCoV-19/Denmark/DCGC-6113/2020 | E | 780 | G | 1 | 20200921 |
| EPI_ISL_765479 | Spike | hCoV-19/France/GES-IPP10968/2020 | E | 780 | R | 1 | 20201218 |
| EPI_ISL_517654 | Spike | hCoV-19/Suriname/SR-43/2020 | E | 780 | A | 1 | 20200627 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | V | 781 | F | 3 (geo) | 20200327 |
| EPI_ISL_568491 | Spike | hCoV-19/Iran/K1r-108/2020 | V | 781 | I | 1 | 20200320 |
| EPI_ISL_825090 | Spike | hCoV-19/SouthAfrica/KRISP-K006790/2020 | V | 781 | S | 2 (geo) | 20201120 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | F | 782 | L | 1 | 20200318 |
| EPI_ISL_731180 | Spike | hCoV-19/England/ALDP-C3C2BE/2020 | F | 782 | Y | 1 | 20201210 |
| EPI_ISL_462479 | Spike | hCoV-19/Spain/CT-ISCIII-202052/2020 | A | 783 | V | 24 (geo) | 20200302 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | A | 783 | C | 7 (geo) | 20200313 |
| EPI_ISL_444343 | Spike | hCoV-19/England/CAMB-1ABEDF/2020 | A | 783 | S | 63 (geo) | 20200000 |
| EPI_ISL_478919 | Spike | hCoV-19/England/OXON-B0904/2020 | A | 783 | T | 4 (geo) | 20200417 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | A | 783 | H | 1 | 20200318 |
| EPI_ISL_703576 | Spike | hCoV-19/England/ALDP-BCAA90/2020 | A | 783 | E | 1 | 20201123 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | Q | 784 | T | 7 (geo) | 20200313 |
| EPI_ISL_548201 | Spike | hCoV-19/Switzerland/GE-SNRCI-7799/2020 | Q | 784 | L | 13 (geo) | 20200300 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | Q | 784 | K | 1 | 20200318 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | Q | 784 | H | 3 (geo) | 20200422 |
| EPI_ISL_788748 | Spike | hCoV-19/USA/TX-HMH-MCoV-13646/2020 | Q | 784 | E | 1 | 20200819 |
| EPI_ISL_485901 | Spike | hCoV-19/USA/LA-GBCL-26684456/2020 | V | 785 | I | 31 (geo) | 20200411 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | V | 785 | A | 2 (geo) | 20200327 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | V | 785 | S | 8 (geo) | 20200313 |
| EPI_ISL_857041 | Spike | hCoV-19/Belgium/UZA-UA-1381/2021 | V | 785 | G | 1 | 20210110 |
| EPI_ISL_582015 | Spike | hCoV-19/Iran/SA-Isf-67/2020 | V | 785 | L | 9 (geo) | 20200510 |
| EPI_ISL_413899 | Spike | hCoV-19/Guangdong/ZH-N22-P0059/2020 | V | 785 | F | 2 (geo) | 20200228 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | K | 786 | Q | 8 (geo) | 20200313 |
| EPI_ISL_678015 | Spike | hCoV-19/Saudi Arabia/KAUST-MADINAH1373/2020 | K | 786 | R | 6 (geo) | 20200604 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | K | 786 | N | 7 (geo) | 20200318 |
| EPI_ISL_520462 | Spike | hCoV-19/Australia/VIC3731/2020 | K | 786 | E | 1 | 20200708 |
| EPI_ISL_426691 | Spike | hCoV-19/Australia/VIC384/2020 | Q | 787 | R | 47 (geo) | 20200323 |
| EPI_ISL_440074 | Spike | hCoV-19/England/CAMB-72EA5/2020 | Q | 787 | H | 28 (geo) | 20200323 |
| EPI_ISL_854984 | Spike | hCoV-19/Bangladesh/DNAS_isl_SM-01/2020 | Q | 787 | L | 6 (geo) | 20200630 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | Q | 787 | K | 35 (geo) | 20200318 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | Q | 787 | T | 7 (geo) | 20200313 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | Q | 787 | P | 1 | 20200422 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | I | 788 | N | 9 (geo) | 20200313 |
| EPI_ISL_857041 | Spike | hCoV-19/Belgium/UZA-UA-1381/2021 | I | 788 | S | 1 | 20210110 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | I | 788 | F | 1 | 20200318 |
| EPI_ISL_776770 | Spike | hCoV-19/Spain/M-20267289/2020 | I | 788 | V | 2 (geo) | 20200811 |
| EPI_ISL_455350 | Spike | hCoV-19/Spain/PV-ISCIII-201385/2020 | I | 788 | M | 1 | 20200229 |
| EPI_ISL_710362 | Spike | hCoV-19/USA/CO-CDPHE-2010280196/2020 | I | 788 | T | 1 | 20201026 |
| EPI_ISL_854984 | Spike | hCoV-19/Bangladesh/DNAS_isl_SM-01/2020 | Y | 789 | N | 5 (geo) | 20200630 |
| EPI_ISL_568500 | Spike | hCoV-19/Iran/K1r-21/2020 | Y | 789 | S | 1 | 20200327 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | Y | 789 | L | 7 (geo) | 20200313 |
| EPI_ISL_437875 | Spike | hCoV-19/Greece/152_33705/2020 | Y | 789 | D | 2 (geo) | 20200314 |
| EPI_ISL_740028 | Spike | hCoV-19/Luxembourg/LNS1956201/2020 | Y | 789 | H | 2 (geo) | 20200803 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | Y | 789 | T | 2 (geo) | 20200318 |
| EPI_ISL_537404 | Spike | hCoV-19/Spain/RI-IBV-99005861/2020 | K | 790 | T | 2 (geo) | 20200305 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | K | 790 | Q | 10 (geo) | 20200313 |
| EPI_ISL_677969 | Spike | hCoV-19/Saudi Arabia/KAUST-MADINAH1482/2020 | K | 790 | R | 4 (geo) | 20200619 |
| EPI_ISL_458771 | Spike | hCoV-19/England/BRIS-128E25/2020 | K | 790 | N | 2 (geo) | 20200417 |
| EPI_ISL_788900 | Spike | hCoV-19/USA/WI-UW-2557/2020 | K | 790 | I | 3 (geo) | 20201229 |
| EPI_ISL_415741 | Spike | hCoV-19/Taiwan/CGMH-CGU-03/2020 | T | 791 | I | 69 (geo) | 20200226 |
| EPI_ISL_568483 | Spike | hCoV-19/Iran/K1r-4/2020 | T | 791 | P | 18 (geo) | 20200322 |
| EPI_ISL_455350 | Spike | hCoV-19/Spain/PV-ISCIII-201385/2020 | T | 791 | K | 31 (geo) | 20200229 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | T | 791 | N | 7 (geo) | 20200313 |
| EPI_ISL_465688 | Spike | hCoV-19/Canada/Qc-L00240846/2020 | T | 791 | A | 5 (geo) | 20200327 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | T | 791 | H | 1 | 20200318 |
| EPI_ISL_444430 | Spike | hCoV-19/England/CAMB-7FEC6/2020 | P | 792 | L | 6 (geo) | 20200418 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | P | 792 | A | 4 (geo) | 20200310 |
| EPI_ISL_831430 | Spike | hCoV-19/Germany/BE-RKI-I-0127/2020 | P | 792 | T | 16 (geo) | 20200000 |
| EPI_ISL_767043 | Spike | hCoV-19/Italy/APU-POLBA06/2020 | P | 792 | R | 2 (geo) | 20200321 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | P | 792 | H | 1 | 20200318 |
| EPI_ISL_579164 | Spike | hCoV-19/New Zealand/20VR1921/2020 | P | 792 | S | 2 (geo) | 20200403 |
| EPI_ISL_500656 | Spike | hCoV-19/Australia/NSW2195/2020 | P | 793 | L | 12 (geo) | 20200321 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | P | 793 | T | 7 (geo) | 20200313 |
| EPI_ISL_618263 | Spike | hCoV-19/Denmark/DCGC-2079/2020 | P | 793 | S | 6 (geo) | 20200727 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | P | 793 | Q | 1 | 20200318 |
| EPI_ISL_651070 | Spike | hCoV-19/England/PORT-2F5FD2/2020 | I | 794 | L | 151 (geo) | 20200000 |
| EPI_ISL_437338 | Spike | hCoV-19/DRC/2529/2020 | I | 794 | F | 6 (geo) | 20200415 |
| EPI_ISL_700077 | Spike | hCoV-19/India/MH-ACTREC-428/2020 | I | 794 | T | 4 (geo) | 20200731 |
| EPI_ISL_565910 | Spike | hCoV-19/Spain/AN-IBV-98001957/2020 | I | 794 | N | 7 (geo) | 20200313 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | I | 794 | V | 3 (geo) | 20200422 |
| EPI_ISL_723078 | Spike | hCoV-19/Germany/BW-UKT-a045/2020 | I | 794 | K | 1 | 20200326 |
| EPI_ISL_756539 | Spike | hCoV-19/England/ALDP-C8A248/2020 | K | 795 | R | 1 | 20201216 |
| EPI_ISL_614493 | Spike | hCoV-19/Denmark/DCGC-1068/2020 | K | 795 | Q | 2 (geo) | 20200601 |
| EPI_ISL_848101 | Spike | hCoV-19/Ireland/D-20G48610/2020 | K | 795 | N | 7 (geo) | 20200404 |
| EPI_ISL_723078 | Spike | hCoV-19/Germany/BW-UKT-a045/2020 | K | 795 | S | 1 | 20200326 |
| EPI_ISL_649918 | Spike | hCoV-19/England/204742212/2020 | D | 796 | Y | 199 (geo) | 20200000 |
| EPI_ISL_493614 | Spike | hCoV-19/England/PORT-2CF9E2/2020 | D | 796 | H | 93 (geo) | 20200000 |
| EPI_ISL_672251 | Spike | hCoV-19/USA/CA-CZB-10186/2020 | D | 796 | G | 73 (geo) | 20200514 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | D | 796 | I | 1 | 20200318 |
| EPI_ISL_767839 | Spike | hCoV-19/Iran/K1r-133/2020 | D | 796 | N | 4 (geo) | 20200600 |
| EPI_ISL_723078 | Spike | hCoV-19/Germany/BW-UKT-a045/2020 | D | 796 | L | 1 | 20200326 |
| EPI_ISL_766613 | Spike | hCoV-19/Sweden/20-53538/2020 | D | 796 | A | 1 | 20201002 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | F | 797 | L | 23 (geo) | 20200318 |
| EPI_ISL_638192 | Spike | hCoV-19/England/CAMB-1B80F7/2020 | F | 797 | V | 1 | 20201016 |
| EPI_ISL_411951 | Spike | hCoV-19/Sweden/01/2020 | F | 797 | C | 9 (geo) | 20200207 |
| EPI_ISL_723078 | Spike | hCoV-19/Germany/BW-UKT-a045/2020 | F | 797 | I | 1 | 20200326 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | G | 798 | A | 4 (geo) | 20200422 |
| EPI_ISL_454101 | Spike | hCoV-19/Portugal/PT0385/2020 | G | 798 | S | 15 (geo) | 20200320 |
| EPI_ISL_512455 | Spike | hCoV-19/Scotland/CVR1867/2020 | G | 798 | C | 2 (geo) | 20200407 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | G | 798 | V | 2 (geo) | 20200318 |
| EPI_ISL_476986 | Spike | hCoV-19/Belgium/rega-0414476/2020 | G | 799 | S | 6 (geo) | 20200414 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | G | 799 | V | 6 (geo) | 20200318 |
| EPI_ISL_707955 | Spike | hCoV-19/Germany/SL-SU-10428507/2020 | G | 799 | C | 2 (geo) | 20200321 |
| EPI_ISL_474974 | Spike | hCoV-19/Israel/CVL-n-6035/2020 | G | 799 | A | 1 | 20200315 |
| EPI_ISL_509412 | Spike | hCoV-19/Turkey/ACUTG-1/2020 | G | 799 | D | 1 | 20200413 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | F | 800 | L | 1 | 20200318 |
| EPI_ISL_570425 | Spike | hCoV-19/USA/WA-UW-11513/2020 | F | 800 | V | 1 | 20200624 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | N | 801 | I | 1 | 20200318 |
| EPI_ISL_482881 | Spike | hCoV-19/France/OCC-23/2020 | N | 801 | K | 1 | 20200609 |
| EPI_ISL_660618 | Spike | hCoV-19/South Africa/KRISP-K004588/2020 | N | 801 | D | 1 | 20201106 |
| EPI_ISL_836842 | Spike | hCoV-19/England/ALDP-E88002/2021 | N | 801 | S | 1 | 20210103 |
| EPI_ISL_493337 | Spike | hCoV-19/Mexico/TAB-InDRE-22/2020 | F | 802 | Y | 1 | 20200426 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | F | 802 | S | 2 (geo) | 20200422 |
| EPI_ISL_568489 | Spike | hCoV-19/Iran/K1r-62/2020 | S | 803 | P | 2 (geo) | 20200425 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | S | 803 | T | 1 | 20200512 |
| EPI_ISL_666675 | Spike | hCoV-19/France/ARA-SC063/2020 | S | 803 | L | 4 (geo) | 20200415 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | S | 803 | H | 1 | 20200318 |
| EPI_ISL_642077 | Spike | hCoV-19/England/QEUH-B0FBAB/2020 | S | 803 | F | 1 | 20201102 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | Q | 804 | N | 1 | 20200512 |
| EPI_ISL_475513 | Spike | hCoV-19/Sweden/20-14178/2020 | Q | 804 | H | 2 (geo) | 20200430 |
| EPI_ISL_548896 | Spike | hCoV-19/Canada/ON-PHL-20-01292/2020 | Q | 804 | P | 4 (geo) | 20200600 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | Q | 804 | K | 4 (geo) | 20200318 |
| EPI_ISL_737876 | Spike | hCoV-19/Switzerland/VS-ETHZ-411027/2020 | Q | 804 | R | 2 (geo) | 20201203 |
| EPI_ISL_642077 | Spike | hCoV-19/England/QEUH-B0FBAB/2020 | Q | 804 | T | 1 | 20201102 |
| EPI_ISL_614687 | Spike | hCoV-19/Denmark/DCGC-1056/2020 | I | 805 | V | 60 (geo) | 20200316 |
| EPI_ISL_684482 | Spike | hCoV-19/Japan/PG-0872/2020 | I | 805 | M | 39 (geo) | 20200000 |
| EPI_ISL_568489 | Spike | hCoV-19/Iran/K1r-62/2020 | I | 805 | F | 1 | 20200425 |
| EPI_ISL_649218 | Spike | hCoV-19/England/ALDP-B49422/2020 | I | 805 | L | 1 | 20201107 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | I | 805 | Y | 1 | 20200318 |
| EPI_ISL_642077 | Spike | hCoV-19/England/QEUH-B0FBAB/2020 | I | 805 | N | 1 | 20201102 |
| EPI_ISL_827199 | Spike | hCoV-19/Iceland/3506/2020 | L | 806 | V | 7 (geo) | 20200811 |
| EPI_ISL_568489 | Spike | hCoV-19/Iran/K1r-62/2020 | L | 806 | F | 2 (geo) | 20200425 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | L | 806 | Y | 1 | 20200318 |
| EPI_ISL_614167 | Spike | hCoV-19/USA/MI-MDHHS-SC22116/2020 | L | 806 | Q | 3 (geo) | 20201006 |
| EPI_ISL_532739 | Spike | hCoV-19/England/QEUH-896FFB/2020 | L | 806 | S | 1 | 20200724 |
| EPI_ISL_642077 | Spike | hCoV-19/England/QEUH-B0FBAB/2020 | L | 806 | I | 1 | 20201102 |
| EPI_ISL_678229 | Spike | hCoV-19/Saudi Arabia/KAUST-MAKKAH143/2020 | P | 807 | L | 12 (geo) | 20200324 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | P | 807 | T | 7 (geo) | 20200512 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | P | 807 | Q | 1 | 20200318 |
| EPI_ISL_587089 | Spike | hCoV-19/England/ALDP-A2EB10/2020 | P | 807 | S | 5 (geo) | 20201005 |
| EPI_ISL_569678 | Spike | hCoV-19/USA/CA-LAC-USC15/2020-06-09 | P | 807 | R | 1 | 20200609 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | P | 807 | V | 1 | 20201124 |
| EPI_ISL_419794 | Spike | hCoV-19/Australia/VIC82/2020 | D | 808 | N | 12 (geo) | 20200314 |
| EPI_ISL_438163 | Spike | hCoV-19/USA/WA-S610/2020 | D | 808 | G | 35 (geo) | 20200423 |
| EPI_ISL_812842 | Spike | hCoV-19/Egypt/CCHE57357-A-72/2020 | D | 808 | H | 5 (geo) | 20200630 |
| EPI_ISL_475732 | Spike | hCoV-19/USA/UT-04043/2020 | D | 808 | R | 2 (geo) | 20200512 |
| EPI_ISL_478716 | Spike | hCoV-19/Australia/NSW604/2020 | D | 808 | E | 9 (geo) | 20200407 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | D | 808 | I | 1 | 20200318 |
| EPI_ISL_787187 | Spike | hCoV-19/USA/TX-HMH-MCoV-13895/2020 | D | 808 | Y | 4 (geo) | 20200817 |
| EPI_ISL_859141 | Spike | hCoV-19/Wales/ALDP-CB4139/2020 | D | 808 | A | 2 (geo) | 20201218 |
| EPI_ISL_495308 | Spike | hCoV-19/USA/VA-DCLS-0636/2020 | D | 808 | V | 1 | 20200411 |
| EPI_ISL_525599 | Spike | hCoV-19/USA/NY-Wadsworth-13245-01/2020 | P | 809 | S | 169 (geo) | 20200311 |
| EPI_ISL_819426 | Spike | hCoV-19/England/PORT-2E897A/2020 | P | 809 | L | 128 (geo) | 20200000 |
| EPI_ISL_753860 | Spike | hCoV-19/Germany/BE-ChVir-D1911-8207/2020 | P | 809 | T | 9 (geo) | 20200929 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | P | 809 | H | 1 | 20200318 |
| EPI_ISL_613530 | Spike | hCoV-19/USA/MN-MDH-1896/2020 | P | 809 | R | 1 | 20201023 |
| EPI_ISL_538747 | Spike | hCoV-19/Spain/CB-IBV-98002835/2020 | P | 809 | Q | 2 (geo) | 20200325 |
| EPI_ISL_603257 | Spike | hCoV-19/USA/WA-UW-488/2020 | S | 810 | L | 46 (geo) | 20200312 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | S | 810 | Q | 1 | 20200318 |
| EPI_ISL_588181 | Spike | hCoV-19/England/QEUH-9FAC57/2020 | S | 810 | P | 2 (geo) | 20200927 |
| EPI_ISL_768693 | Spike | hCoV-19/Japan/IC-0484/2020 | S | 810 | A | 1 | 20201200 |
| EPI_ISL_642077 | Spike | hCoV-19/England/QEUH-B0FBAB/2020 | S | 810 | I | 1 | 20201102 |
| EPI_ISL_479561 | Spike | hCoV-19/India/MH-NIV-65281/2020 | K | 811 | R | 5 (geo) | 20200616 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | K | 811 | N | 5 (geo) | 20200318 |
| EPI_ISL_707955 | Spike | hCoV-19/Germany/SL-SU-10428507/2020 | K | 811 | E | 2 (geo) | 20200321 |
| EPI_ISL_541709 | Spike | hCoV-19/India/MH-NIV-159293/2020 | K | 811 | M | 1 | 20200811 |
| EPI_ISL_791987 | Spike | hCoV-19/Indonesia/JT-NIHRD-PME3225/2020 | K | 811 | I | 2 (geo) | 20200717 |
| EPI_ISL_784886 | Spike | hCoV-19/USA/TX-HMH-MCoV-18538/2020 | K | 811 | T | 1 | 20201120 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | K | 811 | S | 1 | 20200422 |
| EPI_ISL_842065 | Spike | hCoV-19/England/PORT-2EB6BC/2020 | P | 812 | S | 521 (geo) | 20200000 |
| EPI_ISL_450416 | Spike | hCoV-19/Anhui/HN011/2020 | P | 812 | T | 4 (geo) | 20200203 |
| EPI_ISL_631525 | Spike | hCoV-19/USA/NY-NYCPHL-000029/2020 | P | 812 | L | 487 (geo) | 20200309 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | P | 812 | Q | 13 (geo) | 20200318 |
| EPI_ISL_467244 | Spike | hCoV-19/Spain/MD-IBV-003652/2020 | P | 812 | R | 4 (geo) | 20200401 |
| EPI_ISL_671303 | Spike | hCoV-19/Gibraltar/204841736/2020 | S | 813 | I | 332 (geo) | 20200000 |
| EPI_ISL_465715 | Spike | hCoV-19/England/20188024804/2020 | S | 813 | N | 7 (geo) | 20200421 |
| EPI_ISL_464175 | Spike | hCoV-19/England/20080000104/2020 | S | 813 | G | 6 (geo) | 20200216 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | S | 813 | A | 4 (geo) | 20200318 |
| EPI_ISL_435059 | Spike | hCoV-19/South Africa/R05475/2020 | S | 813 | R | 3 (geo) | 20200320 |
| EPI_ISL_602563 | Spike | hCoV-19/USA/NY-SBU-A58597/2020 | S | 813 | T | 1 | 20200425 |
| EPI_ISL_642077 | Spike | hCoV-19/England/QEUH-B0FBAB/2020 | S | 813 | K | 1 | 20201102 |
| EPI_ISL_582015 | Spike | hCoV-19/Iran/SA-Isf-67/2020 | K | 814 | N | 5 (geo) | 20200510 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | K | 814 | R | 13 (geo) | 20200318 |
| EPI_ISL_738820 | Spike | hCoV-19/USA/CA-CZB-11254/2020 | K | 814 | M | 9 (geo) | 20200424 |
| EPI_ISL_516856 | Spike | hCoV-19/England/LOND-1260704/2020 | K | 814 | E | 7 (geo) | 20200317 |
| EPI_ISL_539452 | Spike | hCoV-19/Switzerland/AG-ETHZ-260158/2020 | K | 814 | T | 12 (geo) | 20200826 |
| EPI_ISL_582014 | Spike | hCoV-19/Iran/SA-Isf-7/2020 | K | 814 | Q | 4 (geo) | 20200510 |
| EPI_ISL_591342 | Spike | hCoV-19/Iran/SA-Isf-18/2020 | R | 815 | K | 13 (geo) | 20200509 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | R | 815 | G | 2 (geo) | 20200318 |
| EPI_ISL_751259 | Spike | hCoV-19/India/DL-IGIB11305635/2020 | R | 815 | M | 1 | 20200800 |
| EPI_ISL_642077 | Spike | hCoV-19/England/QEUH-B0FBAB/2020 | R | 815 | E | 1 | 20201102 |
| EPI_ISL_519012 | Spike | hCoV-19/Australia/VIC4611/2020 | R | 815 | S | 3 (geo) | 20200713 |
| EPI_ISL_577654 | Spike | hCoV-19/India/MH-NIV-219744/2020 | S | 816 | T | 1 | 20200920 |
| EPI_ISL_436548 | Spike | hCoV-19/USA/FL-BPHL-044/2020 | S | 816 | P | 4 (geo) | 20200415 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | S | 816 | H | 1 | 20200318 |
| EPI_ISL_642077 | Spike | hCoV-19/England/QEUH-B0FBAB/2020 | S | 816 | V | 1 | 20201102 |
| EPI_ISL_414378 | Spike | hCoV-19/Singapore/12/2020 | F | 817 | L | 7 (geo) | 20200217 |
| EPI_ISL_480613 | Spike | hCoV-19/Australia/VIC963/2020 | F | 817 | I | 2 (geo) | 20200327 |
| EPI_ISL_719255 | Spike | hCoV-19/England/CAMC-C440D7/2020 | F | 817 | S | 1 | 20201210 |
| EPI_ISL_465835 | Spike | hCoV-19/England/201380236/2020 | I | 818 | V | 159 (geo) | 20200325 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | I | 818 | L | 2 (geo) | 20200318 |
| EPI_ISL_642077 | Spike | hCoV-19/England/QEUH-B0FBAB/2020 | I | 818 | Y | 1 | 20201102 |
| EPI_ISL_450421 | Spike | hCoV-19/Anhui/HN023/2020 | I | 818 | S | 1 | 20200206 |
| EPI_ISL_804977 | Spike | hCoV-19/Spain/ML-ISCIII-2013736/2020 | E | 819 | D | 6 (geo) | 20200806 |
| EPI_ISL_660118 | Spike | hCoV-19/Iran/SA-Isf-10/2020 | E | 819 | G | 1 | 20200418 |
| EPI_ISL_480613 | Spike | hCoV-19/Australia/VIC963/2020 | E | 819 | Q | 2 (geo) | 20200327 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | E | 819 | K | 1 | 20200318 |
| EPI_ISL_419243 | Spike | hCoV-19/Hong Kong/HKPU70-1302/2020 | D | 820 | N | 29 (geo) | 20200222 |
| EPI_ISL_674458 | Spike | hCoV-19/England/MILK-B88409/2020 | D | 820 | H | 1 | 20201113 |
| EPI_ISL_474539 | Spike | hCoV-19/Wales/PHWC-35BC5/2020 | D | 820 | Y | 3 (geo) | 20200426 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | D | 820 | I | 1 | 20200318 |
| EPI_ISL_480613 | Spike | hCoV-19/Australia/VIC963/2020 | D | 820 | V | 1 | 20200327 |
| EPI_ISL_510856 | Spike | hCoV-19/Sweden/20-51852/2020 | D | 820 | G | 2 (geo) | 20200601 |
| EPI_ISL_834110 | Spike | hCoV-19/England/ALDP-F4AEE3/2021 | D | 820 | E | 1 | 20210105 |
| EPI_ISL_605927 | Spike | hCoV-19/Gabon/121GAB/2020 | L | 821 | V | 8 (geo) | 20200321 |
| EPI_ISL_484082 | Spike | hCoV-19/England/GSTT-265DC22/2020 | L | 821 | Q | 2 (geo) | 20200321 |
| EPI_ISL_420848 | Spike | hCoV-19/DRC/445/2020 | L | 821 | I | 6 (geo) | 20200300 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | L | 821 | Y | 1 | 20200318 |
| EPI_ISL_812815 | Spike | hCoV-19/Egypt/CCHE57357-A-42/2020 | L | 821 | P | 1 | 20200723 |
| EPI_ISL_422883 | Spike | hCoV-19/Netherlands/NoordBrabant_89/2020 | L | 822 | F | 353 (geo) | 20200000 |
| EPI_ISL_812815 | Spike | hCoV-19/Egypt/CCHE57357-A-42/2020 | L | 822 | P | 2 (geo) | 20200723 |
| EPI_ISL_480613 | Spike | hCoV-19/Australia/VIC963/2020 | L | 822 | M | 1 | 20200327 |
| EPI_ISL_421998 | Spike | hCoV-19/England/20148002404/2020 | L | 822 | I | 2 (geo) | 20200402 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | F | 823 | S | 1 | 20200318 |
| EPI_ISL_667573 | Spike | hCoV-19/Japan/IC-0144/2020 | F | 823 | Y | 1 | 20200900 |
| EPI_ISL_431292 | Spike | hCoV-19/Fujian/IM3520004T/2020 | N | 824 | T | 7 (geo) | 20200318 |
| EPI_ISL_484019 | Spike | hCoV-19/England/GSTT-265D81F/2020 | N | 824 | S | 3 (geo) | 20200325 |
| EPI_ISL_588944 | Spike | hCoV-19/England/QEUH-9F8C68/2020 | N | 824 | Y | 1 | 20200927 |
| EPI_ISL_737557 | Spike | hCoV-19/Switzerland/SO-ETHZ-410236/2020 | N | 824 | H | 1 | 20201214 |
| EPI_ISL_582005 | Spike | hCoV-19/Iran/SA-Isf-14/2020 | N | 824 | K | 2 (geo) | 20200510 |
| EPI_ISL_667374 | Spike | hCoV-19/USA/OR-OHSU-2871/2020 | N | 824 | D | 1 | 20200903 |
| EPI_ISL_461081 | Spike | hCoV-19/Netherlands/NA_646/2020 | K | 825 | R | 8 (geo) | 20200331 |
| EPI_ISL_492594 | Spike | hCoV-19/England/BRIS-12FDC7/2020 | K | 825 | T | 1 | 20200410 |
| EPI_ISL_591065 | Spike | hCoV-19/Iran/SA-Isf-19/2020 | K | 825 | Q | 2 (geo) | 20200509 |
| EPI_ISL_591060 | Spike | hCoV-19/Iran/SA-Isf-20/2020 | V | 826 | G | 17 (geo) | 20200411 |
| EPI_ISL_448605 | Spike | hCoV-19/England/OXON-AD973/2020 | V | 826 | L | 76 (geo) | 20200000 |
| EPI_ISL_415593 | Spike | hCoV-19/USA/WA-UW65/2020 | V | 826 | M | 19 (geo) | 20200310 |
| EPI_ISL_677666 | Spike | hCoV-19/USA/NY-Wadsworth-81624-01/2020 | V | 826 | A | 1 | 20200506 |
| EPI_ISL_453593 | Spike | hCoV-19/England/NORW-E9340/2020 | T | 827 | I | 35 (geo) | 20200427 |
| EPI_ISL_543201 | Spike | hCoV-19/USA/TX-HMH-3797/2020 | T | 827 | S | 11 (geo) | 20200613 |
| EPI_ISL_626219 | Spike | hCoV-19/Germany/NW-HHU-220/2020 | T | 827 | K | 1 | 20200430 |
| EPI_ISL_589377 | Spike | hCoV-19/England/MILK-9ECC3A/2020 | T | 827 | A | 3 (geo) | 20200429 |
| EPI_ISL_511745 | Spike | hCoV-19/Portugal/PT1202/2020 | T | 827 | N | 1 | 20200331 |
| EPI_ISL_581493 | Spike | hCoV-19/Congo/UKT-015/2020 | L | 828 | I | 3 (geo) | 20200625 |
| EPI_ISL_455776 | Spike | hCoV-19/India/OR-RMRC27/2020 | L | 828 | P | 5 (geo) | 20200404 |
| EPI_ISL_725286 | Spike | hCoV-19/England/NORW-F59F4/2020 | L | 828 | F | 2 (geo) | 20201112 |
| EPI_ISL_862072 | Spike | hCoV-19/Finland/30SS9E1/2020 | L | 828 | H | 3 (geo) | 20200930 |
| EPI_ISL_511745 | Spike | hCoV-19/Portugal/PT1202/2020 | L | 828 | T | 1 | 20200331 |
| EPI_ISL_447908 | Spike | hCoV-19/Thailand/Siriraj_5/2020 | A | 829 | T | 208 (geo) | 20200000 |
| EPI_ISL_831439 | Spike | hCoV-19/Germany/BE-RKI-I-0087/2020 | A | 829 | S | 10 (geo) | 20200000 |
| EPI_ISL_591769 | Spike | hCoV-19/Australia/VIC11855/2020 | A | 829 | V | 9 (geo) | 20200803 |
| EPI_ISL_511745 | Spike | hCoV-19/Portugal/PT1202/2020 | A | 829 | C | 1 | 20200331 |
| EPI_ISL_672607 | Spike | hCoV-19/Iran/SA-Isf-50/2020 | A | 829 | G | 1 | 20200806 |
| EPI_ISL_430846 | Spike | hCoV-19/France/IDF-CIBU-200634/2020 | D | 830 | N | 20 (geo) | 20200401 |
| EPI_ISL_706882 | Spike | hCoV-19/England/PORT-2F5066/2020 | D | 830 | Y | 11 (geo) | 20200000 |
| EPI_ISL_415593 | Spike | hCoV-19/USA/WA-UW65/2020 | D | 830 | G | 33 (geo) | 20200310 |
| EPI_ISL_569373 | Spike | hCoV-19/France/PAC-IHU-0208/2020 | D | 830 | H | 3 (geo) | 20200328 |
| EPI_ISL_468159 | Spike | hCoV-19/Pakistan/NIH-44905/2020 | D | 830 | A | 2 (geo) | 20200602 |
| EPI_ISL_511745 | Spike | hCoV-19/Portugal/PT1202/2020 | D | 830 | R | 1 | 20200331 |
| EPI_ISL_786040 | Spike | hCoV-19/USA/TX-HMH-MCoV-16356/2020 | D | 830 | V | 2 (geo) | 20201102 |
| EPI_ISL_501073 | Spike | hCoV-19/USA/CO-UW-MAYO36/2020 | D | 830 | E | 1 | 20200318 |
| EPI_ISL_842069 | Spike | hCoV-19/England/PORT-2EB713/2020 | A | 831 | V | 138 (geo) | 20200000 |
| EPI_ISL_849664 | Spike | hCoV-19/Australia/QLD1307/2020 | A | 831 | S | 11 (geo) | 20200321 |
| EPI_ISL_418384 | Spike | hCoV-19/Canada/ON-PHL-2294/2020 | A | 831 | C | 2 (geo) | 20200200 |
| EPI_ISL_455157 | Spike | hCoV-19/Netherlands/NA_352/2020 | A | 831 | T | 2 (geo) | 20200406 |
| EPI_ISL_744215 | Spike | hCoV-19/Luxembourg/LNS5315916/2020 | G | 832 | V | 2 (geo) | 20201030 |
| EPI_ISL_510190 | Spike | hCoV-19/Spain/MD-IBV-005309/2020 | G | 832 | S | 17 (geo) | 20200316 |
| EPI_ISL_429691 | Spike | hCoV-19/Brazil/MG-CV35/2020 | G | 832 | D | 2 (geo) | 20200318 |
| EPI_ISL_437610 | Spike | hCoV-19/Thailand/SI204512-NT/2020 | G | 832 | C | 1 | 20200312 |
| EPI_ISL_418384 | Spike | hCoV-19/Canada/ON-PHL-2294/2020 | G | 832 | W | 2 (geo) | 20200200 |
| EPI_ISL_842989 | Spike | hCoV-19/England/LOND-1287B65/2020 | G | 832 | F | 1 | 20201122 |
| EPI_ISL_418384 | Spike | hCoV-19/Canada/ON-PHL-2294/2020 | F | 833 | L | 6 (geo) | 20200200 |
| EPI_ISL_448232 | Spike | hCoV-19/England/NORW-E8790/2020 | F | 833 | S | 1 | 20200411 |
| EPI_ISL_787120 | Spike | hCoV-19/USA/TX-HMH-MCoV-13827/2020 | F | 833 | Y | 1 | 20200817 |
| EPI_ISL_559385 | Spike | hCoV-19/England/ALDP-4990AE/2020 | I | 834 | V | 26 (geo) | 20200526 |
| EPI_ISL_456693 | Spike | hCoV-19/England/CAMB-1B2558/2020 | I | 834 | T | 60 (geo) | 20200000 |
| EPI_ISL_671099 | Spike | hCoV-19/Denmark/DCGC-11729/2020 | I | 834 | N | 4 (geo) | 20201026 |
| EPI_ISL_635694 | Spike | hCoV-19/USA/CA-ALSR-2818/2020 | I | 834 | S | 11 (geo) | 20200722 |
| EPI_ISL_568482 | Spike | hCoV-19/Iran/K1r-1/2020 | I | 834 | F | 7 (geo) | 20200322 |
| EPI_ISL_418384 | Spike | hCoV-19/Canada/ON-PHL-2294/2020 | I | 834 | H | 2 (geo) | 20200200 |
| EPI_ISL_568490 | Spike | hCoV-19/Iran/K1r-103/2020 | I | 834 | D | 1 | 20200422 |
| EPI_ISL_856721 | Spike | hCoV-19/Italy/VEN-PD10/2020 | K | 835 | E | 5 (geo) | 20200313 |
| EPI_ISL_806504 | Spike | hCoV-19/Canada/AB-90856/2020 | K | 835 | R | 3 (geo) | 20200503 |
| EPI_ISL_511821 | Spike | hCoV-19/USA/CA-IGI-0067/2020 | K | 835 | I | 1 | 20200612 |
| EPI_ISL_418384 | Spike | hCoV-19/Canada/ON-PHL-2294/2020 | K | 835 | Q | 2 (geo) | 20200200 |
| EPI_ISL_568485 | Spike | hCoV-19/Iran/K1r-10/2020 | K | 835 | N | 1 | 20200328 |
| EPI_ISL_854082 | Spike | hCoV-19/Austria/CeMM1654/2020 | Q | 836 | L | 17 (geo) | 20200000 |
| EPI_ISL_433716 | Spike | hCoV-19/England/CAMB-7830A/2020 | Q | 836 | H | 40 (geo) | 20200000 |
| EPI_ISL_703591 | Spike | hCoV-19/England/ALDP-BCA59F/2020 | Q | 836 | K | 9 (geo) | 20201123 |
| EPI_ISL_548631 | Spike | hCoV-19/USA/CA-CZB-4053/2020 | Q | 836 | E | 5 (geo) | 20200716 |
| EPI_ISL_733365 | Spike | hCoV-19/Russia/MUR-RII-MH6258S/2020 | Q | 836 | R | 3 (geo) | 20201113 |
| EPI_ISL_460462 | Spike | hCoV-19/USA/MA-MGH-00150/2020 | Q | 836 | P | 4 (geo) | 20200326 |
| EPI_ISL_418384 | Spike | hCoV-19/Canada/ON-PHL-2294/2020 | Q | 836 | T | 2 (geo) | 20200200 |
| EPI_ISL_439419 | Spike | hCoV-19/England/CAMB-76603/2020 | Y | 837 | H | 16 (geo) | 20200330 |
| EPI_ISL_591062 | Spike | hCoV-19/Iran/SA-Isf-16/2020 | Y | 837 | N | 3 (geo) | 20200509 |
| EPI_ISL_418384 | Spike | hCoV-19/Canada/ON-PHL-2294/2020 | Y | 837 | I | 2 (geo) | 20200200 |
| EPI_ISL_455350 | Spike | hCoV-19/Spain/PV-ISCIII-201385/2020 | Y | 837 | L | 1 | 20200229 |
| EPI_ISL_570091 | Spike | hCoV-19/USA/WA-UW-6244/2020 | G | 838 | D | 12 (geo) | 20200402 |
| EPI_ISL_788818 | Spike | hCoV-19/USA/TX-HMH-MCoV-13725/2020 | G | 838 | R | 1 | 20200817 |
| EPI_ISL_450425 | Spike | hCoV-19/Anhui/MAS368/2020 | G | 838 | S | 8 (geo) | 20200212 |
| EPI_ISL_592069 | Spike | hCoV-19/Australia/VIC12738/2020 | G | 838 | V | 6 (geo) | 20200000 |
| EPI_ISL_418384 | Spike | hCoV-19/Canada/ON-PHL-2294/2020 | G | 838 | W | 2 (geo) | 20200200 |
| EPI_ISL_579413 | Spike | hCoV-19/New Zealand/20VR3076/2020 | D | 839 | Y | 508 (geo) | 20200000 |
| EPI_ISL_515859 | Spike | hCoV-19/South Africa/KRISP-K001374/2020 | D | 839 | V | 1 | 20200716 |
| EPI_ISL_478483 | Spike | hCoV-19/England/NORT-281D2C/2020 | D | 839 | G | 2 (geo) | 20200324 |
| EPI_ISL_547499 | Spike | hCoV-19/Netherlands/NH-RIVM-10073/2020 | D | 839 | E | 4 (geo) | 20200227 |
| EPI_ISL_422317 | Spike | hCoV-19/Wales/PHWC-25EDE/2020 | D | 839 | N | 7 (geo) | 20200325 |
| EPI_ISL_700193 | Spike | hCoV-19/India/MH-ACTREC-548/2020 | D | 839 | A | 8 (geo) | 20200828 |
| EPI_ISL_511745 | Spike | hCoV-19/Portugal/PT1202/2020 | D | 839 | L | 1 | 20200331 |
| EPI_ISL_511745 | Spike | hCoV-19/Portugal/PT1202/2020 | C | 840 | L | 1 | 20200331 |
| EPI_ISL_627142 | Spike | hCoV-19/England/NORW-F01D3/2020 | L | 841 | R | 90 (geo) | 20200000 |
| EPI_ISL_568485 | Spike | hCoV-19/Iran/K1r-10/2020 | L | 841 | I | 6 (geo) | 20200328 |
| EPI_ISL_569103 | Spike | hCoV-19/France/PAC-IHU-1270/2020 | L | 841 | F | 13 (geo) | 20200818 |
| EPI_ISL_511745 | Spike | hCoV-19/Portugal/PT1202/2020 | L | 841 | P | 2 (geo) | 20200331 |
| EPI_ISL_476515 | Spike | hCoV-19/Senegal/63766/2020 | L | 841 | V | 1 | 20200612 |
| EPI_ISL_444132 | Spike | hCoV-19/England/LOND-D4551/2020 | G | 842 | V | 150 (geo) | 20200408 |
| EPI_ISL_581882 | Spike | hCoV-19/Switzerland/BS-42344991/2020 | G | 842 | C | 1 | 20200708 |
| EPI_ISL_496764 | Spike | hCoV-19/Panama/334102/2020 | G | 842 | S | 81 (geo) | 20200321 |
| EPI_ISL_841942 | Spike | hCoV-19/England/PORT-2E22FD/2020 | G | 842 | D | 13 (geo) | 20200000 |
| EPI_ISL_511745 | Spike | hCoV-19/Portugal/PT1202/2020 | G | 842 | W | 1 | 20200331 |
| EPI_ISL_568485 | Spike | hCoV-19/Iran/K1r-10/2020 | D | 843 | G | 6 (geo) | 20200328 |
| EPI_ISL_568497 | Spike | hCoV-19/Iran/K1r-54/2020 | D | 843 | E | 4 (geo) | 20200320 |
| EPI_ISL_545232 | Spike | hCoV-19/USA/TX-HMH-2297/2020 | D | 843 | N | 2 (geo) | 20200506 |
| EPI_ISL_733488 | Spike | hCoV-19/Russia/OMS-ORINFI-MH10283M/2020 | D | 843 | A | 1 | 20201111 |
| EPI_ISL_804751 | Spike | hCoV-19/USA/MI-MDHHS-SC22843/2020 | I | 844 | S | 1 | 20201125 |
| EPI_ISL_805386 | Spike | hCoV-19/Canada/AB-35367/2020 | I | 844 | V | 9 (geo) | 20200425 |
| EPI_ISL_591061 | Spike | hCoV-19/Iran/SA-Isf-21/2020 | I | 844 | F | 1 | 20200410 |
| EPI_ISL_654944 | Spike | hCoV-19/Sweden/20-52720/2020 | I | 844 | M | 2 (geo) | 20200714 |
| EPI_ISL_854053 | Spike | hCoV-19/Austria/CeMM1620/2020 | A | 845 | S | 527 (geo) | 20200000 |
| EPI_ISL_460347 | Spike | hCoV-19/USA/MA-MGH-00516/2020 | A | 845 | D | 68 (geo) | 20200314 |
| EPI_ISL_705558 | Spike | hCoV-19/England/CAMB-1BCA31/2020 | A | 845 | V | 135 (geo) | 20200000 |
| EPI_ISL_481215 | Spike | hCoV-19/Norway/2660/2020 | A | 845 | T | 12 (geo) | 20200525 |
| EPI_ISL_428443 | Spike | hCoV-19/Guangdong/20SF115/2020 | A | 846 | V | 307 (geo) | 20200121 |
| EPI_ISL_454022 | Spike | hCoV-19/Portugal/PT0306/2020 | A | 846 | S | 198 (geo) | 20200314 |
| EPI_ISL_479283 | Spike | hCoV-19/England/SHEF-D321F/2020 | A | 846 | G | 7 (geo) | 20200510 |
| EPI_ISL_496674 | Spike | hCoV-19/Panama/330779/2020 | A | 846 | T | 2 (geo) | 20200318 |
| EPI_ISL_644748 | Spike | hCoV-19/Zimbabwe/ZW-9095/2020 | A | 846 | F | 4 (geo) | 20200601 |
| EPI_ISL_467078 | Spike | hCoV-19/Spain/AN-IBV-001915/2020 | A | 846 | D | 1 | 20200317 |
| EPI_ISL_603257 | Spike | hCoV-19/USA/WA-UW-488/2020 | R | 847 | K | 176 (geo) | 20200312 |
| EPI_ISL_438007 | Spike | hCoV-19/Austria/CeMM0161/2020 | R | 847 | T | 33 (geo) | 20200305 |
| EPI_ISL_454250 | Spike | hCoV-19/Portugal/PT0526/2020 | R | 847 | I | 5 (geo) | 20200406 |
| EPI_ISL_603260 | Spike | hCoV-19/USA/WA-UW-251/2020 | R | 847 | S | 2 (geo) | 20200309 |
| EPI_ISL_582004 | Spike | hCoV-19/Iran/SA-Isf-13/2020 | D | 848 | N | 9 (geo) | 20200410 |
| EPI_ISL_568482 | Spike | hCoV-19/Iran/K1r-1/2020 | D | 848 | E | 1 | 20200322 |
| EPI_ISL_511923 | Spike | hCoV-19/India/MH-MW15/2020 | D | 848 | G | 11 (geo) | 20200501 |
| EPI_ISL_788408 | Spike | hCoV-19/USA/TX-HMH-MCoV-13259/2020 | D | 848 | H | 1 | 20200824 |
| EPI_ISL_431969 | Spike | hCoV-19/Wales/PHWC-27E72/2020 | L | 849 | F | 21 (geo) | 20200000 |
| EPI_ISL_516222 | Spike | hCoV-19/USA/MI-MDHHS-SC21495/2020 | L | 849 | I | 3 (geo) | 20200730 |
| EPI_ISL_511923 | Spike | hCoV-19/India/MH-MW15/2020 | L | 849 | P | 12 (geo) | 20200501 |
| EPI_ISL_789942 | Spike | hCoV-19/USA/TX-HMH-MCoV-12816/2020 | I | 850 | T | 19 (geo) | 20200819 |
| EPI_ISL_465084 | Spike | hCoV-19/England/20119060904/2020 | I | 850 | F | 4 (geo) | 20200311 |
| EPI_ISL_530495 | Spike | hCoV-19/England/QEUH-96F3B2/2020 | I | 850 | V | 3 (geo) | 20200817 |
| EPI_ISL_603257 | Spike | hCoV-19/USA/WA-UW-488/2020 | I | 850 | N | 2 (geo) | 20200312 |
| EPI_ISL_493342 | Spike | hCoV-19/Mexico/NAY-InDRE_27/2020 | I | 850 | L | 1 | 20200526 |
| EPI_ISL_591061 | Spike | hCoV-19/Iran/SA-Isf-21/2020 | C | 851 | W | 5 (geo) | 20200410 |
| EPI_ISL_722325 | Spike | hCoV-19/Netherlands/un-EMC-801/2020 | A | 852 | G | 11 (geo) | 20200000 |
| EPI_ISL_540924 | Spike | hCoV-19/Peru/ARE-UPCH-0016/2020 | A | 852 | S | 20 (geo) | 20200319 |
| EPI_ISL_414445 | Spike | hCoV-19/Netherlands/ZuidHolland_9/2020 | A | 852 | V | 9 (geo) | 20200303 |
| EPI_ISL_529172 | Spike | hCoV-19/USA/SC-DHEC-0026/2020 | A | 852 | T | 2 (geo) | 20200318 |
| EPI_ISL_524398 | Spike | hCoV-19/USA/UT-08674/2020 | A | 852 | E | 1 | 20200508 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | Q | 853 | K | 3 (geo) | 20200408 |
| EPI_ISL_642422 | Spike | hCoV-19/England/QEUH-B11414/2020 | Q | 853 | H | 1 | 20201102 |
| EPI_ISL_582015 | Spike | hCoV-19/Iran/SA-Isf-67/2020 | K | 854 | N | 68 (geo) | 20200510 |
| EPI_ISL_554782 | Spike | hCoV-19/England/ALDP-9445EA/2020 | K | 854 | M | 3 (geo) | 20200607 |
| EPI_ISL_437868 | Spike | hCoV-19/USA/CT-UW-6569/2020 | K | 854 | R | 3 (geo) | 20200402 |
| EPI_ISL_732813 | Spike | hCoV-19/Spain/RI-IBV-99010990/2020 | K | 854 | T | 2 (geo) | 20201018 |
| EPI_ISL_605054 | Spike | hCoV-19/USA/NY-QDX-2734/2020 | K | 854 | E | 2 (geo) | 20200315 |
| EPI_ISL_557711 | Spike | hCoV-19/England/ALDP-7080E3/2020 | K | 854 | S | 1 | 20200630 |
| EPI_ISL_666700 | Spike | hCoV-19/Ireland/DL-NVRL-20G48992/2020 | F | 855 | L | 8 (geo) | 20200406 |
| EPI_ISL_724556 | Spike | hCoV-19/England/LOND-1264CC5/2020 | F | 855 | S | 3 (geo) | 20201123 |
| EPI_ISL_493155 | Spike | hCoV-19/Wuhan/0125-A160/2020 | N | 856 | K | 3 (geo) | 20200125 |
| EPI_ISL_604776 | Spike | hCoV-19/USA/FL-QDX-2513/2020 | N | 856 | S | 78 (geo) | 20200316 |
| EPI_ISL_804863 | Spike | hCoV-19/USA/DC-DFS-PHL-0079/2020 | N | 856 | T | 1 | 20200626 |
| EPI_ISL_753698 | Spike | hCoV-19/Indonesia/SN-NIHRD-PME1701/2020 | N | 856 | D | 1 | 20200617 |
| EPI_ISL_603263 | Spike | hCoV-19/USA/WA-UW-2102/2020 | G | 857 | C | 3 (geo) | 20200325 |
| EPI_ISL_500119 | Spike | hCoV-19/England/LIVE-A5498/2020 | L | 858 | F | 24 (geo) | 20200320 |
| EPI_ISL_603263 | Spike | hCoV-19/USA/WA-UW-2102/2020 | L | 858 | H | 1 | 20200325 |
| EPI_ISL_553015 | Spike | hCoV-19/Wales/MILK-9713DB/2020 | L | 858 | I | 3 (geo) | 20200818 |
| EPI_ISL_663500 | Spike | hCoV-19/Australia/VIC17093/2020 | L | 858 | P | 1 | 20200814 |
| EPI_ISL_672000 | Spike | hCoV-19/Ecuador/UEES-7235/2020 | T | 859 | I | 611 (geo) | 20200000 |
| EPI_ISL_626854 | Spike | hCoV-19/England/NORW-F23EA/2020 | T | 859 | N | 275 (geo) | 20200000 |
| EPI_ISL_513130 | Spike | hCoV-19/SaudiArabia/KAUST-MADINAH343/2020 | T | 859 | L | 2 (geo) | 20200424 |
| EPI_ISL_846271 | Spike | hCoV-19/England/ALDP-F82F82/2021 | T | 859 | A | 1 | 20210108 |
| EPI_ISL_451183 | Spike | hCoV-19/Uganda/UG001/2020 | T | 859 | S | 1 | 20200325 |
| EPI_ISL_571197 | Spike | hCoV-19/USA/MI-QDX-462/2020 | V | 860 | I | 19 (geo) | 20200322 |
| EPI_ISL_746362 | Spike | hCoV-19/USA/UT-UPHL-2012107439/2020 | V | 860 | L | 5 (geo) | 20200618 |
| EPI_ISL_539499 | Spike | hCoV-19/Spain/AN-ISCIII-202657/2020 | V | 860 | A | 5 (geo) | 20200312 |
| EPI_ISL_422051 | Spike | hCoV-19/Wales/PHWC-26A51/2020 | V | 860 | F | 9 (geo) | 20200330 |
| EPI_ISL_408485 | Spike | hCoV-19/Beijing/IVDC-BJ-005/2020 | V | 860 | Q | 1 | 20200118 |
| EPI_ISL_474267 | Spike | hCoV-19/Wales/PHWC-2C00E/2020 | L | 861 | F | 3 (geo) | 20200402 |
| EPI_ISL_633509 | Spike | hCoV-19/England/QEUH-AE29F0/2020 | L | 861 | V | 1 | 20201027 |
| EPI_ISL_549746 | Spike | hCoV-19/England/QEUH-9B853C/2020 | L | 861 | A | 1 | 20200907 |
| EPI_ISL_408485 | Spike | hCoV-19/Beijing/IVDC-BJ-005/2020 | L | 861 | K | 1 | 20200118 |
| EPI_ISL_489362 | Spike | hCoV-19/Northern Ireland/NIRE-1032BB/2020 | P | 862 | S | 18 (geo) | 20200421 |
| EPI_ISL_474267 | Spike | hCoV-19/Wales/PHWC-2C00E/2020 | P | 862 | A | 2 (geo) | 20200402 |
| EPI_ISL_712984 | Spike | hCoV-19/Denmark/DCGC-13723/2020 | P | 862 | Q | 1 | 20201130 |
| EPI_ISL_582024 | Spike | hCoV-19/Iran/K1r-13/2020 | P | 863 | H | 15 (geo) | 20200300 |
| EPI_ISL_525804 | Spike | hCoV-19/USA/CA-OHSU-0857/2020 | P | 863 | S | 5 (geo) | 20200627 |
| EPI_ISL_476901 | Spike | hCoV-19/USA/WA-UW-4757/2020 | P | 863 | T | 4 (geo) | 20200328 |
| EPI_ISL_566513 | Spike | hCoV-19/England/MILK-9C2E16/2020 | P | 863 | L | 1 | 20200910 |
| EPI_ISL_440111 | Spike | hCoV-19/England/CAMB-735DC/2020 | L | 864 | V | 9 (geo) | 20200320 |
| EPI_ISL_474267 | Spike | hCoV-19/Wales/PHWC-2C00E/2020 | L | 864 | F | 1 | 20200402 |
| EPI_ISL_568479 | Spike | hCoV-19/Iran/K1r-76/2020 | L | 865 | F | 5 (geo) | 20200427 |
| EPI_ISL_856721 | Spike | hCoV-19/Italy/VEN-PD10/2020 | L | 865 | P | 4 (geo) | 20200313 |
| EPI_ISL_474267 | Spike | hCoV-19/Wales/PHWC-2C00E/2020 | L | 865 | A | 1 | 20200402 |
| EPI_ISL_626306 | Spike | hCoV-19/Belgium/ULG-10545/2020 | T | 866 | K | 1 | 20201023 |
| EPI_ISL_784723 | Spike | hCoV-19/USA/TX-HMH-MCoV-18375/2020 | T | 866 | I | 1 | 20201118 |
| EPI_ISL_474267 | Spike | hCoV-19/Wales/PHWC-2C00E/2020 | T | 866 | H | 1 | 20200402 |
| EPI_ISL_568488 | Spike | hCoV-19/Iran/K1r-19/2020 | T | 866 | P | 1 | 20200322 |
| EPI_ISL_417768 | Spike | hCoV-19/Iceland/99/2020 | D | 867 | G | 25 (geo) | 20200310 |
| EPI_ISL_427168 | Spike | hCoV-19/USA/ID-UW-4100/2020 | D | 867 | N | 3 (geo) | 20200329 |
| EPI_ISL_846454 | Spike | hCoV-19/England/ALDP-F82FEC/2021 | D | 867 | Y | 1 | 20210108 |
| EPI_ISL_700261 | Spike | hCoV-19/India/MH-ACTREC-626/2020 | D | 867 | A | 5 (geo) | 20200911 |
| EPI_ISL_541350 | Spike | hCoV-19/Brazil/RJ-1862/2020 | D | 867 | E | 3 (geo) | 20200404 |
| EPI_ISL_474267 | Spike | hCoV-19/Wales/PHWC-2C00E/2020 | D | 867 | R | 1 | 20200402 |
| EPI_ISL_416348 | Spike | hCoV-19/Shanghai/SH0039/2020 | E | 868 | K | 2 (geo) | 20200206 |
| EPI_ISL_629674 | Spike | hCoV-19/England/MILK-AC8231/2020 | E | 868 | G | 6 (geo) | 20201022 |
| EPI_ISL_493982 | Spike | hCoV-19/Wales/PHWC-166131/2020 | E | 868 | D | 1 | 20200612 |
| EPI_ISL_479414 | Spike | hCoV-19/Wales/PHWC-165062/2020 | M | 869 | I | 12 (geo) | 20200430 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | M | 869 | N | 1 | 20200619 |
| EPI_ISL_779704 | Spike | hCoV-19/Italy/LOM-UniMI05/2020 | M | 869 | V | 1 | 20200224 |
| EPI_ISL_583954 | Spike | hCoV-19/Italy/TUS-DBM-10/2020 | I | 870 | V | 128 (geo) | 20200321 |
| EPI_ISL_439751 | Spike | hCoV-19/England/LIVE-99707/2020 | I | 870 | T | 22 (geo) | 20200409 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | I | 870 | D | 1 | 20200619 |
| EPI_ISL_420412 | Spike | hCoV-19/Belgium/BJ-0324192/2020 | I | 870 | S | 1 | 20200324 |
| EPI_ISL_705507 | Spike | hCoV-19/England/CAMB-1B9032/2020 | A | 871 | S | 107 (geo) | 20200000 |
| EPI_ISL_538569 | Spike | hCoV-19/Spain/AN-IBV-98001648/2020 | A | 871 | V | 61 (geo) | 20200407 |
| EPI_ISL_636471 | Spike | hCoV-19/Italy/VEN-IZSVe-20-25/2020 | A | 871 | T | 1 | 20200324 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | A | 871 | C | 1 | 20200619 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | Q | 872 | S | 1 | 20200619 |
| EPI_ISL_594592 | Spike | hCoV-19/England/BIRM-658C5/2020 | Q | 872 | L | 4 (geo) | 20201002 |
| EPI_ISL_814090 | Spike | hCoV-19/Turkey/HSGM-2002084/2020 | Q | 872 | P | 1 | 20200804 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | Y | 873 | I | 1 | 20200619 |
| EPI_ISL_568503 | Spike | hCoV-19/Iran/K1r-116/2020 | Y | 873 | N | 1 | 20200427 |
| EPI_ISL_568480 | Spike | hCoV-19/Iran/K1r-79/2020 | T | 874 | I | 4 (geo) | 20200425 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | T | 874 | H | 1 | 20200619 |
| EPI_ISL_521955 | Spike | hCoV-19/Australia/VIC2215/2020 | T | 874 | S | 1 | 20200614 |
| EPI_ISL_582024 | Spike | hCoV-19/Iran/K1r-13/2020 | T | 874 | P | 3 (geo) | 20200300 |
| EPI_ISL_568478 | Spike | hCoV-19/Iran/K1r-78/2020 | S | 875 | F | 6 (geo) | 20200427 |
| EPI_ISL_557711 | Spike | hCoV-19/England/ALDP-7080E3/2020 | S | 875 | T | 1 | 20200630 |
| EPI_ISL_465707 | Spike | hCoV-19/England/20186083304/2020 | S | 875 | P | 1 | 20200428 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | A | 876 | C | 1 | 20200619 |
| EPI_ISL_826133 | Spike | hCoV-19/Canada/Qc-JEW-Q9152338/2020 | A | 876 | S | 3 (geo) | 20200515 |
| EPI_ISL_672676 | Spike | hCoV-19/Brazil/MG-L30-CD766/2020 | A | 876 | T | 1 | 20200415 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | L | 877 | T | 1 | 20200619 |
| EPI_ISL_582024 | Spike | hCoV-19/Iran/K1r-13/2020 | L | 877 | M | 2 (geo) | 20200300 |
| EPI_ISL_664059 | Spike | hCoV-19/England/C200045638/2020 | L | 878 | V | 3 (geo) | 20200000 |
| EPI_ISL_456088 | Spike | hCoV-19/Brazil/RJ-1719/2020 | L | 878 | S | 2 (geo) | 20200406 |
| EPI_ISL_831453 | Spike | hCoV-19/Germany/BE-RKI-I-0075/2020 | A | 879 | S | 556 (geo) | 20200000 |
| EPI_ISL_649925 | Spike | hCoV-19/England/204742221/2020 | A | 879 | V | 85 (geo) | 20200000 |
| EPI_ISL_425740 | Spike | hCoV-19/Scotland/CVR211/2020 | A | 879 | T | 52 (geo) | 20200318 |
| EPI_ISL_429292 | Spike | hCoV-19/Denmark/ALAB-HH36/2020 | A | 879 | G | 6 (geo) | 20200312 |
| EPI_ISL_664971 | Spike | hCoV-19/England/CAMB-1BA15C/2020 | A | 879 | L | 1 | 20201110 |
| EPI_ISL_793313 | Spike | hCoV-19/Denmark/DCGC-23861/2020 | A | 879 | E | 2 (geo) | 20201221 |
| EPI_ISL_786283 | Spike | hCoV-19/USA/TX-HMH-MCoV-14798/2020 | A | 879 | P | 2 (geo) | 20201013 |
| EPI_ISL_509417 | Spike | hCoV-19/Turkey/ACUTG-10/2020 | - | 879 | D | 1 | 20200419 |
| EPI_ISL_509417 | Spike | hCoV-19/Turkey/ACUTG-10/2020 | - | 879 | L | 1 | 20200419 |
| EPI_ISL_509417 | Spike | hCoV-19/Turkey/ACUTG-10/2020 | - | 879 | Q | 1 | 20200419 |
| EPI_ISL_602565 | Spike | hCoV-19/Sri Lanka/CMC11595/2020 | - | 879 | G | 1 | 20201023 |
| EPI_ISL_786628 | Spike | hCoV-19/USA/TX-HMH-MCoV-15144/2020 | G | 880 | V | 1 | 20201018 |
| EPI_ISL_544967 | Spike | hCoV-19/Australia/NSW886/2020 | G | 880 | S | 1 | 20200820 |
| EPI_ISL_463404 | Spike | hCoV-19/USA/WA-S914/2020 | G | 880 | C | 1 | 20200427 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | T | 881 | Y | 1 | 20200619 |
| EPI_ISL_513088 | Spike | hCoV-19/SaudiArabia/KAUST-MADINAH1070/2020 | T | 881 | I | 2 (geo) | 20200613 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | I | 882 | N | 1 | 20200619 |
| EPI_ISL_466999 | Spike | hCoV-19/Switzerland/VD-ETHZ-130003/2020 | I | 882 | V | 6 (geo) | 20200505 |
| EPI_ISL_804971 | Spike | hCoV-19/Spain/ML-ISCIII-202059873/2020 | T | 883 | A | 5 (geo) | 20200915 |
| EPI_ISL_528943 | Spike | hCoV-19/Italy/LOM-IZSGC-TE35526/2020 | T | 883 | I | 7 (geo) | 20200508 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | T | 883 | H | 1 | 20200619 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | T | 883 | L | 1 | 20200207 |
| EPI_ISL_709984 | Spike | hCoV-19/Gibraltar/205000649/2020 | T | 883 | S | 4 (geo) | 20201200 |
| EPI_ISL_564493 | Spike | hCoV-19/Australia/VIC7551/2020 | S | 884 | F | 77 (geo) | 20200000 |
| EPI_ISL_543192 | Spike | hCoV-19/USA/TX-HMH-3787/2020 | S | 884 | A | 39 (geo) | 20200611 |
| EPI_ISL_515664 | Spike | hCoV-19/South Africa/KRISP-K002284/2020 | S | 884 | P | 1 | 20200721 |
| EPI_ISL_488985 | Spike | hCoV-19/Scotland/EDB2781/2020 | S | 884 | C | 2 (geo) | 20200330 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | S | 884 | V | 1 | 20200207 |
| EPI_ISL_550466 | Spike | hCoV-19/England/MILK-977979/2020 | G | 885 | D | 4 (geo) | 20200725 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | G | 885 | W | 1 | 20200619 |
| EPI_ISL_568478 | Spike | hCoV-19/Iran/K1r-78/2020 | G | 885 | C | 2 (geo) | 20200427 |
| EPI_ISL_479661 | Spike | hCoV-19/India/MH-NIV-65819/2020 | G | 885 | A | 1 | 20200616 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | W | 886 | L | 7 (geo) | 20200619 |
| EPI_ISL_603838 | Spike | hCoV-19/USA/MA-QDX-1506/2020 | W | 886 | C | 2 (geo) | 20200317 |
| EPI_ISL_568478 | Spike | hCoV-19/Iran/K1r-78/2020 | W | 886 | G | 1 | 20200427 |
| EPI_ISL_723047 | Spike | hCoV-19/India/MH-ACTREC-187/2020 | T | 887 | D | 1 | 20200619 |
| EPI_ISL_467241 | Spike | hCoV-19/Spain/MD-IBV-003717/2020 | T | 887 | A | 3 (geo) | 20200403 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | T | 887 | L | 1 | 20200329 |
| EPI_ISL_604121 | Spike | hCoV-19/USA/UT-QDX-1789/2020 | F | 888 | L | 23 (geo) | 20200315 |
| EPI_ISL_653173 | Spike | hCoV-19/USA/FL-BPHL-2020/2020 | F | 888 | S | 1 | 20200529 |
| EPI_ISL_736989 | Spike | hCoV-19/South Africa/KRISP-EB00584676/2020 | F | 888 | V | 1 | 20201126 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | G | 889 | W | 4 (geo) | 20200430 |
| EPI_ISL_584586 | Spike | hCoV-19/England/CWAR-24FE1F9/2020 | G | 889 | V | 2 (geo) | 20200409 |
| EPI_ISL_417389 | Spike | hCoV-19/Australia/NSW26/2020 | G | 889 | S | 2 (geo) | 20200309 |
| EPI_ISL_666868 | Spike | hCoV-19/USA/FL-BPHL-2246/2020 | G | 889 | C | 1 | 20200904 |
| EPI_ISL_568509 | Spike | hCoV-19/Iran/K1r-126/2020 | G | 889 | A | 1 | 20200427 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | A | 890 | C | 4 (geo) | 20200430 |
| EPI_ISL_805348 | Spike | hCoV-19/Canada/AB-50877/2020 | A | 890 | T | 6 (geo) | 20200416 |
| EPI_ISL_835270 | Spike | hCoV-19/England/QEUH-EF97CB/2021 | A | 890 | S | 1 | 20210105 |
| EPI_ISL_604623 | Spike | hCoV-19/USA/WA-QDX-2242/2020 | A | 890 | V | 1 | 20200314 |
| EPI_ISL_568478 | Spike | hCoV-19/Iran/K1r-78/2020 | A | 890 | P | 1 | 20200427 |
| EPI_ISL_602562 | Spike | hCoV-19/USA/NY-SBU-A58444/2020 | G | 891 | R | 5 (geo) | 20200425 |
| EPI_ISL_547613 | Spike | hCoV-19/USA/WI-GMF-10809/2020 | G | 891 | V | 8 (geo) | 20200714 |
| EPI_ISL_845922 | Spike | hCoV-19/England/CAMC-F7C9F6/2021 | G | 891 | S | 1 | 20210109 |
| EPI_ISL_763283 | Spike | hCoV-19/Netherlands/ZH-EMC-1213/2020 | A | 892 | S | 166 (geo) | 20200000 |
| EPI_ISL_604603 | Spike | hCoV-19/USA/UT-QDX-2264/2020 | A | 892 | V | 100 (geo) | 20200312 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | A | 892 | C | 4 (geo) | 20200430 |
| EPI_ISL_497873 | Spike | hCoV-19/India/MH-NCCS-NR2255/2020 | A | 892 | H | 3 (geo) | 20200521 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | A | 893 | C | 4 (geo) | 20200430 |
| EPI_ISL_508775 | Spike | hCoV-19/USA/FL-BPHL-0571/2020 | A | 893 | V | 32 (geo) | 20200314 |
| EPI_ISL_814090 | Spike | hCoV-19/Turkey/HSGM-2002084/2020 | A | 893 | S | 8 (geo) | 20200804 |
| EPI_ISL_497873 | Spike | hCoV-19/India/MH-NCCS-NR2255/2020 | A | 893 | L | 3 (geo) | 20200521 |
| EPI_ISL_495965 | Spike | hCoV-19/USA/WA-S1539/2020 | A | 893 | E | 1 | 20200526 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | L | 894 | I | 4 (geo) | 20200430 |
| EPI_ISL_448452 | Spike | hCoV-19/England/OXON-AC482/2020 | L | 894 | V | 1 | 20200407 |
| EPI_ISL_568478 | Spike | hCoV-19/Iran/K1r-78/2020 | L | 894 | F | 1 | 20200427 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | Q | 895 | T | 4 (geo) | 20200430 |
| EPI_ISL_690670 | Spike | hCoV-19/Japan/PG-2535/2020 | Q | 895 | K | 4 (geo) | 20200500 |
| EPI_ISL_482727 | Spike | hCoV-19/South Africa/KRISP-0254/2020 | Q | 895 | V | 2 (geo) | 20200614 |
| EPI_ISL_495318 | Spike | hCoV-19/USA/VA-DCLS-0646/2020 | Q | 895 | R | 2 (geo) | 20200411 |
| EPI_ISL_656643 | Spike | hCoV-19/England/ALDP-B63194/2020 | Q | 895 | H | 1 | 20201108 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | I | 896 | N | 4 (geo) | 20200430 |
| EPI_ISL_474816 | Spike | hCoV-19/Spain/CM-IBV-003788/2020 | I | 896 | T | 4 (geo) | 20200402 |
| EPI_ISL_739841 | Spike | hCoV-19/Luxembourg/LNS0849119/2020 | I | 896 | L | 5 (geo) | 20201020 |
| EPI_ISL_490645 | Spike | hCoV-19/England/SHEF-D28B4/2020 | I | 896 | V | 2 (geo) | 20200507 |
| EPI_ISL_748515 | Spike | hCoV-19/Denmark/DCGC-19745/2020 | I | 896 | G | 1 | 20201207 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | P | 897 | T | 5 (geo) | 20200430 |
| EPI_ISL_497873 | Spike | hCoV-19/India/MH-NCCS-NR2255/2020 | P | 897 | Y | 3 (geo) | 20200521 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | F | 898 | I | 5 (geo) | 20200430 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | F | 898 | L | 2 (geo) | 20200207 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | A | 899 | C | 4 (geo) | 20200430 |
| EPI_ISL_451722 | Spike | hCoV-19/Switzerland/GR-ETHZ-100138/2020 | A | 899 | S | 72 (geo) | 20200315 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | A | 899 | V | 9 (geo) | 20200207 |
| EPI_ISL_568479 | Spike | hCoV-19/Iran/K1r-76/2020 | A | 899 | G | 1 | 20200427 |
| EPI_ISL_568488 | Spike | hCoV-19/Iran/K1r-19/2020 | A | 899 | P | 1 | 20200322 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | M | 900 | Y | 4 (geo) | 20200430 |
| EPI_ISL_455009 | Spike | hCoV-19/Wuhan/HB-WHCM2-276/2020 | M | 900 | I | 36 (geo) | 20200224 |
| EPI_ISL_497873 | Spike | hCoV-19/India/MH-NCCS-NR2255/2020 | M | 900 | T | 3 (geo) | 20200521 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | M | 900 | Q | 2 (geo) | 20200207 |
| EPI_ISL_791731 | Spike | hCoV-19/USA/MA-MGH-00730/2020 | M | 900 | L | 2 (geo) | 20200409 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | Q | 901 | A | 4 (geo) | 20200430 |
| EPI_ISL_497873 | Spike | hCoV-19/India/MH-NCCS-NR2255/2020 | Q | 901 | K | 3 (geo) | 20200521 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | Q | 901 | V | 2 (geo) | 20200207 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | M | 902 | N | 4 (geo) | 20200430 |
| EPI_ISL_693262 | Spike | hCoV-19/Australia/QLD1259/2020 | M | 902 | I | 2 (geo) | 20200325 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | M | 902 | L | 4 (geo) | 20200207 |
| EPI_ISL_678238 | Spike | hCoV-19/Saudi Arabia/KAUST-RIYADH1229/2020 | M | 902 | T | 1 | 20200811 |
| EPI_ISL_433979 | Spike | hCoV-19/England/CAMB-7C00F/2020 | M | 902 | V | 1 | 20200412 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | M | 902 | W | 1 | 20210119 |
| EPI_ISL_568478 | Spike | hCoV-19/Iran/K1r-78/2020 | A | 903 | G | 6 (geo) | 20200427 |
| EPI_ISL_446738 | Spike | hCoV-19/Wales/PHWC-330F5/2020 | A | 903 | S | 12 (geo) | 20200414 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | A | 903 | H | 2 (geo) | 20200207 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | A | 903 | L | 1 | 20210119 |
| EPI_ISL_457410 | Spike | hCoV-19/England/NORW-EB065/2020 | Y | 904 | L | 3 (geo) | 20200430 |
| EPI_ISL_549746 | Spike | hCoV-19/England/QEUH-9B853C/2020 | Y | 904 | H | 1 | 20200907 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | Y | 904 | I | 1 | 20210119 |
| EPI_ISL_732791 | Spike | hCoV-19/Spain/RI-IBV-99010963/2020 | R | 905 | G | 3 (geo) | 20201101 |
| EPI_ISL_568478 | Spike | hCoV-19/Iran/K1r-78/2020 | R | 905 | S | 3 (geo) | 20200427 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | R | 905 | K | 2 (geo) | 20200207 |
| EPI_ISL_775877 | Spike | hCoV-19/Germany/HH-hpi-p2020/2020 | R | 905 | M | 1 | 20200321 |
| EPI_ISL_786397 | Spike | hCoV-19/USA/TX-HMH-MCoV-14913/2020 | F | 906 | L | 2 (geo) | 20201014 |
| EPI_ISL_568509 | Spike | hCoV-19/Iran/K1r-126/2020 | F | 906 | P | 1 | 20200427 |
| EPI_ISL_465379 | Spike | hCoV-19/England/20174001604/2020 | F | 906 | V | 1 | 20200421 |
| EPI_ISL_679494 | Spike | hCoV-19/England/LOND-1263E39/2020 | N | 907 | S | 4 (geo) | 20201111 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | N | 907 | M | 1 | 20210119 |
| EPI_ISL_500918 | Spike | hCoV-19/Switzerland/AG-ETHZ-190057/2020 | G | 908 | C | 2 (geo) | 20200709 |
| EPI_ISL_513225 | Spike | hCoV-19/SaudiArabia/KAUST-MAKKAH304/2020 | G | 908 | V | 3 (geo) | 20200421 |
| EPI_ISL_864840 | Spike | hCoV-19/England/CAMB-A9C39D/2020 | I | 909 | V | 78 (geo) | 20200000 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | I | 909 | L | 1 | 20210119 |
| EPI_ISL_536565 | Spike | hCoV-19/Peru/LIM-INS-172/2020 | G | 910 | R | 1 | 20200318 |
| EPI_ISL_640722 | Spike | hCoV-19/Australia/VIC12533/2020 | G | 910 | V | 1 | 20200731 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | G | 910 | L | 1 | 20200401 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | G | 910 | E | 1 | 20210119 |
| EPI_ISL_698602 | Spike | hCoV-19/United Arab Emirates/0428/2020 | V | 911 | I | 21 (geo) | 20200516 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | V | 911 | Y | 1 | 20200401 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | V | 911 | L | 1 | 20210119 |
| EPI_ISL_751354 | Spike | hCoV-19/Italy/VEN-UniVR-42/2020 | T | 912 | I | 4 (geo) | 20200311 |
| EPI_ISL_662515 | Spike | hCoV-19/England/QEUH-B664B6/2020 | T | 912 | A | 2 (geo) | 20201111 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | T | 912 | E | 1 | 20200401 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | T | 912 | H | 1 | 20210119 |
| EPI_ISL_478947 | Spike | hCoV-19/England/OXON-B0C29/2020 | Q | 913 | H | 18 (geo) | 20200000 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | Q | 913 | N | 1 | 20200401 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | Q | 913 | R | 1 | 20210119 |
| EPI_ISL_466190 | Spike | hCoV-19/England/20149040404/2020 | N | 914 | Y | 2 (geo) | 20200404 |
| EPI_ISL_482706 | Spike | hCoV-19/South Africa/KRISP-0180/2020 | N | 914 | S | 2 (geo) | 20200606 |
| EPI_ISL_825625 | Spike | hCoV-19/Spain/CT-HUVH-08511/2020 | N | 914 | I | 1 | 20201221 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | N | 914 | Q | 1 | 20200401 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | N | 914 | M | 1 | 20210119 |
| EPI_ISL_478944 | Spike | hCoV-19/England/OXON-B0BE0/2020 | V | 915 | L | 1 | 20200000 |
| EPI_ISL_483988 | Spike | hCoV-19/England/GSTT-265D615/2020 | V | 915 | I | 18 (geo) | 20200324 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | V | 915 | K | 1 | 20200401 |
| EPI_ISL_460771 | Spike | hCoV-19/Netherlands/NA_608/2020 | V | 915 | F | 2 (geo) | 20200420 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | L | 916 | F | 5 (geo) | 20200324 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | L | 916 | S | 1 | 20210119 |
| EPI_ISL_560972 | Spike | hCoV-19/Sweden/20-50303/2020 | Y | 917 | H | 5 (geo) | 20200310 |
| EPI_ISL_480318 | Spike | hCoV-19/Costa Rica/CRV-0014/2020 | Y | 917 | S | 1 | 20200329 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | Y | 917 | I | 1 | 20200401 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | Y | 917 | M | 1 | 20210119 |
| EPI_ISL_542653 | Spike | hCoV-19/USA/TX-HMH-1325/2020 | E | 918 | Q | 2 (geo) | 20200414 |
| EPI_ISL_447156 | Spike | hCoV-19/Belgium/ULG-10162/2020 | E | 918 | V | 2 (geo) | 20200418 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | E | 918 | K | 3 (geo) | 20200408 |
| EPI_ISL_831437 | Spike | hCoV-19/Germany/BE-RKI-I-0132/2020 | E | 918 | D | 3 (geo) | 20200000 |
| EPI_ISL_568509 | Spike | hCoV-19/Iran/K1r-126/2020 | E | 918 | P | 1 | 20200427 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | E | 918 | A | 1 | 20200401 |
| EPI_ISL_569946 | Spike | hCoV-19/USA/CA-IGI-0242/2020 | E | 918 | G | 3 (geo) | 20200714 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | E | 918 | R | 1 | 20210119 |
| EPI_ISL_561727 | Spike | hCoV-19/Australia/VIC12001/2020 | N | 919 | I | 1 | 20200724 |
| EPI_ISL_839975 | Spike | hCoV-19/England/NORW-F6173/2021 | N | 919 | H | 1 | 20210104 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | N | 919 | S | 2 (geo) | 20200408 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | N | 919 | T | 1 | 20210119 |
| EPI_ISL_707998 | Spike | hCoV-19/Germany/SL-SU-10452037/2020 | Q | 920 | R | 2 (geo) | 20201018 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | Q | 920 | N | 2 (geo) | 20200408 |
| EPI_ISL_866793 | Spike | hCoV-19/England/210320334/2021 | Q | 920 | K | 1 | 20210119 |
| EPI_ISL_469876 | Spike | hCoV-19/Northern Ireland/NIRE-1024D4/2020 | K | 921 | N | 2 (geo) | 20200417 |
| EPI_ISL_539895 | Spike | hCoV-19/England/BRIS-133504/2020 | K | 921 | I | 1 | 20200709 |
| EPI_ISL_463893 | Spike | hCoV-19/Bosnia and Herzegovina/03_Tuzla/2020 | L | 922 | V | 1 | 20200525 |
| EPI_ISL_577945 | Spike | hCoV-19/Netherlands/ZH-EMC-517/2020 | L | 922 | F | 76 (geo) | 20200000 |
| EPI_ISL_424594 | Spike | hCoV-19/Iceland/574/2020 | L | 922 | I | 5 (geo) | 20200300 |
| EPI_ISL_482307 | Spike | hCoV-19/USA/OR-PROV-023/2020 | L | 922 | M | 4 (geo) | 20200328 |
| EPI_ISL_419398 | Spike | hCoV-19/Wales/PHWC-2433A/2020 | I | 923 | D | 4 (geo) | 20200318 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | I | 923 | T | 2 (geo) | 20200408 |
| EPI_ISL_478915 | Spike | hCoV-19/England/OXON-B088F/2020 | I | 923 | M | 1 | 20200410 |
| EPI_ISL_626156 | Spike | hCoV-19/Denmark/DCGC-8934/2020 | I | 923 | F | 1 | 20201026 |
| EPI_ISL_456050 | Spike | hCoV-19/USA/NY-NYUMC814/2020 | A | 924 | V | 34 (geo) | 20200326 |
| EPI_ISL_420057 | Spike | hCoV-19/France/HDF-3141/2020 | A | 924 | S | 36 (geo) | 20200322 |
| EPI_ISL_419398 | Spike | hCoV-19/Wales/PHWC-2433A/2020 | A | 924 | C | 4 (geo) | 20200318 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | A | 924 | K | 2 (geo) | 20200408 |
| EPI_ISL_648567 | Spike | hCoV-19/USA/UT-UPHL-201108035/2020 | N | 925 | Y | 2 (geo) | 20200405 |
| EPI_ISL_814082 | Spike | hCoV-19/Turkey/HSGM-203105/2020 | N | 925 | S | 3 (geo) | 20200606 |
| EPI_ISL_419398 | Spike | hCoV-19/Wales/PHWC-2433A/2020 | N | 925 | Q | 4 (geo) | 20200318 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | N | 925 | H | 2 (geo) | 20200408 |
| EPI_ISL_534224 | Spike | hCoV-19/Sweden/20-08927/2020 | N | 925 | K | 3 (geo) | 20200712 |
| EPI_ISL_532064 | Spike | hCoV-19/England/QEUH-960481/2020 | N | 925 | D | 1 | 20200805 |
| EPI_ISL_419398 | Spike | hCoV-19/Wales/PHWC-2433A/2020 | Q | 926 | P | 4 (geo) | 20200318 |
| EPI_ISL_442041 | Spike | hCoV-19/England/SHEF-C9249/2020 | Q | 926 | H | 11 (geo) | 20200326 |
| EPI_ISL_603720 | Spike | hCoV-19/Switzerland/ZH-ETHZ-321510/2020 | Q | 926 | E | 1 | 20201015 |
| EPI_ISL_419398 | Spike | hCoV-19/Wales/PHWC-2433A/2020 | F | 927 | I | 4 (geo) | 20200318 |
| EPI_ISL_568481 | Spike | hCoV-19/Iran/K1r-80/2020 | N | 928 | D | 2 (geo) | 20200425 |
| EPI_ISL_665485 | Spike | hCoV-19/England/PORT-2EA27D/2020 | S | 929 | T | 530 (geo) | 20200000 |
| EPI_ISL_416693 | Spike | hCoV-19/USA/WA-UW155/2020 | S | 929 | I | 57 (geo) | 20200312 |
| EPI_ISL_573833 | Spike | hCoV-19/Scotland/QEUH-9BAB38/2020 | S | 929 | N | 3 (geo) | 20200907 |
| EPI_ISL_625376 | Spike | hCoV-19/Scotland/QEUH-A9E999/2020 | S | 929 | R | 1 | 20201020 |
| EPI_ISL_663288 | Spike | hCoV-19/Australia/VIC16870/2020 | A | 930 | V | 136 (geo) | 20200000 |
| EPI_ISL_475597 | Spike | hCoV-19/USA/CA-CSMC120/2020 | A | 930 | S | 1 | 20200405 |
| EPI_ISL_455761 | Spike | hCoV-19/India/OR-RMRC160/2020 | A | 930 | T | 2 (geo) | 20200507 |
| EPI_ISL_470415 | Spike | hCoV-19/England/CAMB-7BF6D/2020 | I | 931 | V | 6 (geo) | 20200405 |
| EPI_ISL_856720 | Spike | hCoV-19/Italy/VEN-PD09/2020 | I | 931 | N | 1 | 20200331 |
| EPI_ISL_537574 | Spike | hCoV-19/USA/CA-UCLA-45/2020 | I | 931 | F | 1 | 20200401 |
| EPI_ISL_666345 | Spike | hCoV-19/Wales/PHWC-48BCC9/2020 | I | 931 | T | 1 | 20201102 |
| EPI_ISL_708315 | Spike | hCoV-19/Switzerland/GE-HUG-18268/2020 | G | 932 | R | 1 | 20201030 |
| EPI_ISL_543314 | Spike | hCoV-19/USA/TX-HMH-4034/2020 | G | 932 | V | 10 (geo) | 20200616 |
| EPI_ISL_474798 | Spike | hCoV-19/Spain/CM-IBV-003749/2020 | G | 932 | S | 16 (geo) | 20200401 |
| EPI_ISL_448475 | Spike | hCoV-19/England/OXON-AC6AA/2020 | G | 932 | C | 9 (geo) | 20200407 |
| EPI_ISL_426320 | Spike | hCoV-19/USA/NY-Wadsworth-25860-01/2020 | G | 932 | D | 5 (geo) | 20200320 |
| EPI_ISL_507688 | Spike | hCoV-19/USA/MI-MDHHS-SC21434/2020 | K | 933 | R | 3 (geo) | 20200324 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | I | 934 | N | 3 (geo) | 20200329 |
| EPI_ISL_418304 | Spike | hCoV-19/England/SHEF-BFEBB/2020 | I | 934 | M | 5 (geo) | 20200324 |
| EPI_ISL_591323 | Spike | hCoV-19/Iran/K1r-134/2020 | I | 934 | T | 1 | 20200500 |
| EPI_ISL_849354 | Spike | hCoV-19/Argentina/INEI095287/2020 | I | 934 | V | 2 (geo) | 20201015 |
| EPI_ISL_856703 | Spike | hCoV-19/England/210141392/2021 | I | 934 | F | 1 | 20210106 |
| EPI_ISL_702754 | Spike | hCoV-19/England/ALDP-BB355D/2020 | I | 934 | L | 1 | 20201119 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | Q | 935 | S | 3 (geo) | 20200329 |
| EPI_ISL_607671 | Spike | hCoV-19/England/ALDP-A704BA/2020 | Q | 935 | R | 1 | 20201015 |
| EPI_ISL_421180 | Spike | hCoV-19/Spain/MD-H12-2410/2020 | Q | 935 | H | 2 (geo) | 20200327 |
| EPI_ISL_788229 | Spike | hCoV-19/USA/TX-HMH-MCoV-13078/2020 | Q | 935 | K | 1 | 20200827 |
| EPI_ISL_646184 | Spike | hCoV-19/England/QEUH-B3196A/2020 | Q | 935 | E | 1 | 20201104 |
| EPI_ISL_452908 | Spike | hCoV-19/England/CAMB-1B06B1/2020 | D | 936 | Y | 1446 (geo) | 20200000 |
| EPI_ISL_568486 | Spike | hCoV-19/Iran/K1r-11/2020 | D | 936 | N | 135 (geo) | 20200320 |
| EPI_ISL_420102 | Spike | hCoV-19/Singapore/25/2020 | D | 936 | H | 123 (geo) | 20200305 |
| EPI_ISL_482693 | Spike | hCoV-19/Singapore/546/2020 | D | 936 | E | 18 (geo) | 20200527 |
| EPI_ISL_722489 | Spike | hCoV-19/Netherlands/ZH-EMC-1046/2020 | D | 936 | V | 28 (geo) | 20200000 |
| EPI_ISL_478944 | Spike | hCoV-19/England/OXON-B0BE0/2020 | D | 936 | A | 2 (geo) | 20200000 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | D | 936 | R | 3 (geo) | 20200329 |
| EPI_ISL_605072 | Spike | hCoV-19/Ireland/D-NVRL-20G44549/2020 | D | 936 | G | 15 (geo) | 20200329 |
| EPI_ISL_539499 | Spike | hCoV-19/Spain/AN-ISCIII-202657/2020 | S | 937 | T | 3 (geo) | 20200312 |
| EPI_ISL_447986 | Spike | hCoV-19/England/CAMB-1AD2B3/2020 | S | 937 | L | 32 (geo) | 20200000 |
| EPI_ISL_591795 | Spike | hCoV-19/Australia/VIC14134/2020 | S | 937 | A | 1 | 20200909 |
| EPI_ISL_766322 | Spike | hCoV-19/Gibraltar/205121192/2020 | L | 938 | F | 204 (geo) | 20200000 |
| EPI_ISL_458688 | Spike | hCoV-19/England/NORT-289119/2020 | L | 938 | I | 29 (geo) | 20200327 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | L | 938 | T | 3 (geo) | 20200329 |
| EPI_ISL_704615 | Spike | hCoV-19/England/CAMB-1BCA22/2020 | S | 939 | F | 950 (geo) | 20200000 |
| EPI_ISL_462096 | Spike | hCoV-19/Bangladesh/BCSIR-NILMRC-015/2020 | S | 939 | Y | 2 (geo) | 20200523 |
| EPI_ISL_872198 | Spike | hCoV-19/France/CVL-IPP00682/2021 | S | 939 | A | 1 | 20210105 |
| EPI_ISL_413595 | Spike | hCoV-19/Australia/NSW09/2020 | S | 940 | F | 201 (geo) | 20200228 |
| EPI_ISL_788229 | Spike | hCoV-19/USA/TX-HMH-MCoV-13078/2020 | S | 940 | Y | 4 (geo) | 20200827 |
| EPI_ISL_447256 | Spike | hCoV-19/Taiwan/TSGH-30/2020 | S | 940 | T | 1 | 20200320 |
| EPI_ISL_543732 | Spike | hCoV-19/USA/TX-HMH-4582/2020 | S | 940 | A | 10 (geo) | 20200621 |
| EPI_ISL_439494 | Spike | hCoV-19/England/CAMB-77480/2020 | T | 941 | A | 36 (geo) | 20200331 |
| EPI_ISL_467979 | Spike | hCoV-19/USA/CA-SR0457/2020 | T | 941 | I | 11 (geo) | 20200330 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | T | 941 | H | 4 (geo) | 20200329 |
| EPI_ISL_856720 | Spike | hCoV-19/Italy/VEN-PD09/2020 | T | 941 | P | 1 | 20200331 |
| EPI_ISL_455640 | Spike | hCoV-19/India/WB-S4/2020 | T | 941 | K | 1 | 20200327 |
| EPI_ISL_816177 | Spike | hCoV-19/England/PORT-2E8C9F/2020 | A | 942 | S | 121 (geo) | 20200000 |
| EPI_ISL_582394 | Spike | hCoV-19/Canada/MB-NML-1030/2020 | A | 942 | T | 83 (geo) | 20200327 |
| EPI_ISL_574982 | Spike | hCoV-19/Switzerland/VD-ETHZ-100172/2020 | A | 942 | V | 7 (geo) | 20200316 |
| EPI_ISL_814090 | Spike | hCoV-19/Turkey/HSGM-2002084/2020 | A | 942 | E | 1 | 20200804 |
| EPI_ISL_452342 | Spike | hCoV-19/Beijing/DT-travelNO01/2020 | S | 943 | P | 238 (geo) | 20200312 |
| EPI_ISL_433439 | Spike | hCoV-19/Scotland/EDB1404/2020 | S | 943 | I | 22 (geo) | 20200411 |
| EPI_ISL_602246 | Spike | hCoV-19/USA/TX-DSHS-0949/2020 | S | 943 | R | 2 (geo) | 20200716 |
| EPI_ISL_574292 | Spike | hCoV-19/Ecuador/2343/2020 | S | 943 | T | 5 (geo) | 20200316 |
| EPI_ISL_543094 | Spike | hCoV-19/USA/TX-HMH-3648/2020 | S | 943 | G | 8 (geo) | 20200615 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | S | 943 | K | 4 (geo) | 20200329 |
| EPI_ISL_478944 | Spike | hCoV-19/England/OXON-B0BE0/2020 | A | 944 | V | 3 (geo) | 20200000 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | A | 944 | C | 4 (geo) | 20200329 |
| EPI_ISL_547613 | Spike | hCoV-19/USA/WI-GMF-10809/2020 | A | 944 | S | 1 | 20200714 |
| EPI_ISL_700065 | Spike | hCoV-19/India/MH-ACTREC-416/2020 | L | 945 | F | 2 (geo) | 20200730 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | L | 945 | T | 4 (geo) | 20200329 |
| EPI_ISL_458728 | Spike | hCoV-19/England/BRIS-1289BB/2020 | L | 945 | I | 2 (geo) | 20200414 |
| EPI_ISL_727755 | Spike | hCoV-19/England/PORT-2E9A1C/2020 | G | 946 | V | 65 (geo) | 20200000 |
| EPI_ISL_700481 | Spike | hCoV-19/South Africa/NHLS-UCT-GS-2931/2020 | G | 946 | R | 6 (geo) | 20200509 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | G | 946 | W | 4 (geo) | 20200329 |
| EPI_ISL_770126 | Spike | hCoV-19/USA/WY-WPHL-20044667/2020 | G | 946 | E | 10 (geo) | 20200715 |
| EPI_ISL_674084 | Spike | hCoV-19/England/MILK-B85E4A/2020 | G | 946 | A | 1 | 20201113 |
| EPI_ISL_536374 | Spike | hCoV-19/Canada/QC-LSPQ-L00243735/2020 | K | 947 | R | 19 (geo) | 20200331 |
| EPI_ISL_856720 | Spike | hCoV-19/Italy/VEN-PD09/2020 | K | 947 | Q | 1 | 20200331 |
| EPI_ISL_666104 | Spike | hCoV-19/Scotland/QEUH-AF118D/2020 | K | 947 | I | 1 | 20201029 |
| EPI_ISL_770126 | Spike | hCoV-19/USA/WY-WPHL-20044667/2020 | K | 947 | N | 1 | 20200715 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | L | 948 | T | 5 (geo) | 20200329 |
| EPI_ISL_609266 | Spike | hCoV-19/Wales/MILK-A47C1E/2020 | L | 948 | I | 12 (geo) | 20201005 |
| EPI_ISL_416387 | Spike | hCoV-19/Shanghai/SH0088/2020 | L | 948 | R | 1 | 20200201 |
| EPI_ISL_770126 | Spike | hCoV-19/USA/WY-WPHL-20044667/2020 | L | 948 | F | 1 | 20200715 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | Q | 949 | S | 5 (geo) | 20200329 |
| EPI_ISL_478106 | Spike | hCoV-19/Scotland/CVR3771/2020 | Q | 949 | K | 2 (geo) | 20200530 |
| EPI_ISL_525230 | Spike | hCoV-19/USA/UT-UPHL-2009238/2020 | Q | 949 | R | 1 | 20200513 |
| EPI_ISL_427654 | Spike | hCoV-19/Australia/NSW33/2020 | D | 950 | H | 31 (geo) | 20200306 |
| EPI_ISL_595220 | Spike | hCoV-19/England/NORW-F11F0/2020 | D | 950 | Y | 8 (geo) | 20200000 |
| EPI_ISL_568491 | Spike | hCoV-19/Iran/K1r-108/2020 | D | 950 | N | 24 (geo) | 20200320 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | D | 950 | R | 5 (geo) | 20200329 |
| EPI_ISL_447761 | Spike | hCoV-19/Colombia/ANT-GUV-92146/2020 | D | 950 | G | 3 (geo) | 20200331 |
| EPI_ISL_478106 | Spike | hCoV-19/Scotland/CVR3771/2020 | D | 950 | M | 2 (geo) | 20200530 |
| EPI_ISL_590854 | Spike | hCoV-19/USA/TX-DSHS-0785/2020 | D | 950 | A | 1 | 20200522 |
| EPI_ISL_653187 | Spike | hCoV-19/USA/FL-BPHL-2034/2020 | D | 950 | E | 1 | 20200526 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | V | 951 | C | 5 (geo) | 20200329 |
| EPI_ISL_471942 | Spike | hCoV-19/England/EXET-136FD6/2020 | V | 951 | M | 1 | 20200421 |
| EPI_ISL_478106 | Spike | hCoV-19/Scotland/CVR3771/2020 | V | 951 | W | 2 (geo) | 20200530 |
| EPI_ISL_855322 | Spike | hCoV-19/USA/NY-WCM-0018-1-P/2020 | V | 951 | A | 1 | 20200315 |
| EPI_ISL_416392 | Spike | hCoV-19/Shanghai/SH0100/2020 | V | 952 | F | 7 (geo) | 20200202 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | V | 952 | G | 5 (geo) | 20200329 |
| EPI_ISL_478106 | Spike | hCoV-19/Scotland/CVR3771/2020 | V | 952 | S | 2 (geo) | 20200530 |
| EPI_ISL_518736 | Spike | hCoV-19/Australia/VIC5961/2020 | V | 952 | I | 3 (geo) | 20200720 |
| EPI_ISL_568491 | Spike | hCoV-19/Iran/K1r-108/2020 | V | 952 | L | 1 | 20200320 |
| EPI_ISL_514402 | Spike | hCoV-19/South Africa/LR00105/2020 | V | 952 | A | 1 | 20200715 |
| EPI_ISL_491041 | Spike | hCoV-19/Romania/ROSV_12278/2020 | N | 953 | K | 1 | 20200607 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | N | 953 | Q | 5 (geo) | 20200329 |
| EPI_ISL_478106 | Spike | hCoV-19/Scotland/CVR3771/2020 | N | 953 | T | 2 (geo) | 20200530 |
| EPI_ISL_417978 | Spike | hCoV-19/Spain/MD-HLP-LP15-4/2020 | Q | 954 | K | 26 (geo) | 20200309 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | Q | 954 | P | 5 (geo) | 20200329 |
| EPI_ISL_548196 | Spike | hCoV-19/Switzerland/GE-SNRCI-7548/2020 | Q | 954 | L | 5 (geo) | 20200300 |
| EPI_ISL_674340 | Spike | hCoV-19/England/ALDP-B8524E/2020 | Q | 954 | R | 4 (geo) | 20201115 |
| EPI_ISL_448432 | Spike | hCoV-19/England/NOTT-110EB7/2020 | N | 955 | H | 12 (geo) | 20200429 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | N | 955 | K | 5 (geo) | 20200329 |
| EPI_ISL_478106 | Spike | hCoV-19/Scotland/CVR3771/2020 | N | 955 | M | 2 (geo) | 20200530 |
| EPI_ISL_560328 | Spike | hCoV-19/USA/NM-UNM-00602/2020 | N | 955 | S | 1 | 20200604 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | A | 956 | C | 5 (geo) | 20200329 |
| EPI_ISL_478106 | Spike | hCoV-19/Scotland/CVR3771/2020 | A | 956 | H | 2 (geo) | 20200530 |
| EPI_ISL_424201 | Spike | hCoV-19/USA/WA-UW-1659/2020 | Q | 957 | L | 473 (geo) | 20200320 |
| EPI_ISL_520034 | Spike | hCoV-19/Australia/VIC5269/2020 | Q | 957 | R | 16 (geo) | 20200000 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | Q | 957 | T | 5 (geo) | 20200329 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | Q | 957 | H | 7 (geo) | 20200408 |
| EPI_ISL_478106 | Spike | hCoV-19/Scotland/CVR3771/2020 | Q | 957 | K | 3 (geo) | 20200530 |
| EPI_ISL_418300 | Spike | hCoV-19/England/SHEF-BFE51/2020 | A | 958 | S | 25 (geo) | 20200315 |
| EPI_ISL_478106 | Spike | hCoV-19/Scotland/CVR3771/2020 | A | 958 | L | 2 (geo) | 20200530 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | A | 958 | Q | 2 (geo) | 20200408 |
| EPI_ISL_610155 | Spike | hCoV-19/Indonesia/JT-UGM-48408/2020 | A | 958 | T | 1 | 20200901 |
| EPI_ISL_856721 | Spike | hCoV-19/Italy/VEN-PD10/2020 | L | 959 | V | 1 | 20200313 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | L | 959 | F | 5 (geo) | 20200329 |
| EPI_ISL_447256 | Spike | hCoV-19/Taiwan/TSGH-30/2020 | N | 960 | K | 9 (geo) | 20200320 |
| EPI_ISL_429703 | Spike | hCoV-19/Brazil/MG-CV50/2020 | N | 960 | S | 3 (geo) | 20200326 |
| EPI_ISL_856720 | Spike | hCoV-19/Italy/VEN-PD09/2020 | N | 960 | T | 1 | 20200331 |
| EPI_ISL_438513 | Spike | hCoV-19/England/CAMB-7757E/2020 | T | 961 | A | 6 (geo) | 20200330 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | T | 961 | H | 5 (geo) | 20200329 |
| EPI_ISL_632034 | Spike | hCoV-19/USA/NY-NYCPHL-000575/2020 | T | 961 | M | 20 (geo) | 20200402 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | T | 961 | I | 2 (geo) | 20200408 |
| EPI_ISL_541709 | Spike | hCoV-19/India/MH-NIV-159293/2020 | T | 961 | L | 1 | 20200811 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | L | 962 | A | 5 (geo) | 20200329 |
| EPI_ISL_541709 | Spike | hCoV-19/India/MH-NIV-159293/2020 | L | 962 | D | 1 | 20200811 |
| EPI_ISL_856720 | Spike | hCoV-19/Italy/VEN-PD09/2020 | L | 962 | V | 1 | 20200331 |
| EPI_ISL_438357 | Spike | hCoV-19/England/CAMB-76612/2020 | V | 963 | C | 5 (geo) | 20200329 |
| EPI_ISL_519296 | Spike | hCoV-19/Australia/VIC4921/2020 | V | 963 | F | 2 (geo) | 20200714 |
| EPI_ISL_541709 | Spike | hCoV-19/India/MH-NIV-159293/2020 | V | 963 | L | 1 | 20200811 |
| EPI_ISL_428230 | Spike | hCoV-19/Taiwan/TSGH-13/2020 | V | 963 | D | 1 | 20200317 |
| EPI_ISL_542227 | Spike | hCoV-19/Italy/LOM-UniMI-L256/2020 | K | 964 | R | 6 (geo) | 20200223 |
| EPI_ISL_871995 | Spike | hCoV-19/Spain/CE-ISCIII-2016501/2020 | Q | 965 | R | 1 | 20201014 |
| EPI_ISL_788666 | Spike | hCoV-19/USA/TX-HMH-MCoV-13546/2020 | Q | 965 | L | 1 | 20200822 |
| EPI_ISL_856715 | Spike | hCoV-19/Italy/VEN-PD04/2020 | L | 966 | F | 4 (geo) | 20200308 |
| EPI_ISL_487943 | Spike | hCoV-19/Scotland/EDB3533/2020 | S | 967 | G | 4 (geo) | 20200413 |
| EPI_ISL_742838 | Spike | hCoV-19/Wales/PHWC-49D857/2020 | S | 967 | T | 5 (geo) | 20201206 |
| EPI_ISL_497878 | Spike | hCoV-19/India/MH-NCCS-NR1333/2020 | S | 967 | A | 1 | 20200516 |
| EPI_ISL_434740 | Spike | hCoV-19/USA/TX-HMH031/2020 | S | 967 | R | 3 (geo) | 20200324 |
| EPI_ISL_867381 | Spike | hCoV-19/Wales/PHWC-4B8364/2021 | S | 967 | N | 1 | 20210111 |
| EPI_ISL_605149 | Spike | hCoV-19/USA/UT-UPHL-2009385/2020 | S | 968 | Y | 1 | 20200522 |
| EPI_ISL_591070 | Spike | hCoV-19/South Korea/CNUHV03-CA22/2020 | S | 968 | A | 1 | 20200520 |
| EPI_ISL_710030 | Spike | hCoV-19/Gibraltar/205000708/2020 | N | 969 | K | 1 | 20201200 |
| EPI_ISL_522839 | Spike | hCoV-19/USA/MD-MDH-0104/2020 | N | 969 | S | 2 (geo) | 20200527 |
| EPI_ISL_856720 | Spike | hCoV-19/Italy/VEN-PD09/2020 | F | 970 | C | 1 | 20200331 |
| EPI_ISL_833527 | Spike | hCoV-19/Italy/CAM-TIGEM-927/2020 | F | 970 | L | 1 | 20200506 |
| EPI_ISL_408485 | Spike | hCoV-19/Beijing/IVDC-BJ-005/2020 | F | 970 | S | 1 | 20200118 |
| EPI_ISL_510792 | Spike | hCoV-19/Switzerland/BE-ETHZ-210059/2020 | G | 971 | C | 1 | 20200720 |
| EPI_ISL_833527 | Spike | hCoV-19/Italy/CAM-TIGEM-927/2020 | G | 971 | V | 2 (geo) | 20200506 |
| EPI_ISL_465337 | Spike | hCoV-19/England/20172030604/2020 | A | 972 | V | 1 | 20200420 |
| EPI_ISL_833527 | Spike | hCoV-19/Italy/CAM-TIGEM-927/2020 | A | 972 | Q | 1 | 20200506 |
| EPI_ISL_461401 | Spike | hCoV-19/USA/WA-UW-4684/2020 | I | 973 | F | 2 (geo) | 20200406 |
| EPI_ISL_536565 | Spike | hCoV-19/Peru/LIM-INS-172/2020 | I | 973 | V | 2 (geo) | 20200318 |
| EPI_ISL_856720 | Spike | hCoV-19/Italy/VEN-PD09/2020 | I | 973 | L | 1 | 20200331 |
| EPI_ISL_507007 | Spike | hCoV-19/Iran/IRVSH-01/2020 | S | 974 | P | 1 | 20200501 |
| EPI_ISL_636948 | Spike | hCoV-19/Canada/ON-PHL-20-01800/2020 | S | 974 | L | 2 (geo) | 20200500 |
| EPI_ISL_833527 | Spike | hCoV-19/Italy/CAM-TIGEM-927/2020 | S | 974 | Q | 1 | 20200506 |
| EPI_ISL_528541 | Spike | hCoV-19/India/TG-CDFD-N5400/2020 | S | 975 | R | 2 (geo) | 20200531 |
| EPI_ISL_833527 | Spike | hCoV-19/Italy/CAM-TIGEM-927/2020 | S | 975 | V | 1 | 20200506 |
| EPI_ISL_568486 | Spike | hCoV-19/Iran/K1r-11/2020 | S | 975 | N | 1 | 20200320 |
| EPI_ISL_425332 | Spike | hCoV-19/England/CAMB-7476C/2020 | V | 976 | F | 11 (geo) | 20200329 |
| EPI_ISL_512153 | Spike | hCoV-19/USA/AK-PHL588/2020 | V | 976 | I | 2 (geo) | 20200623 |
| EPI_ISL_578199 | Spike | hCoV-19/Spain/RI-ISCIII-201571/2020 | L | 977 | I | 1 | 20200303 |
| EPI_ISL_767604 | Spike | hCoV-19/USA/NY-Wadsworth-291678-01/2020 | N | 978 | S | 1 | 20201224 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | N | 978 | D | 2 (geo) | 20200408 |
| EPI_ISL_856720 | Spike | hCoV-19/Italy/VEN-PD09/2020 | N | 978 | I | 1 | 20200331 |
| EPI_ISL_496720 | Spike | hCoV-19/Panama/332759/2020 | N | 978 | T | 1 | 20200320 |
| EPI_ISL_574450 | Spike | hCoV-19/USA/TX-DSHS-0546/2020 | D | 979 | H | 3 (geo) | 20200514 |
| EPI_ISL_477295 | Spike | hCoV-19/USA/MN-MDH-1206/2020 | D | 979 | Y | 2 (geo) | 20200510 |
| EPI_ISL_669717 | Spike | hCoV-19/Denmark/DCGC-11099/2020 | D | 979 | V | 1 | 20201102 |
| EPI_ISL_539532 | Spike | hCoV-19/Spain/CN-ISCIII-201810/2020 | I | 980 | F | 1 | 20200306 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | I | 980 | L | 1 | 20200329 |
| EPI_ISL_568488 | Spike | hCoV-19/Iran/K1r-19/2020 | I | 980 | N | 1 | 20200322 |
| EPI_ISL_462990 | Spike | hCoV-19/Bosnia and Herzegovina/02-Banja Luka/2020 | I | 980 | T | 1 | 20200429 |
| EPI_ISL_678060 | Spike | hCoV-19/Saudi Arabia/KAUST-MAKKAH219/2020 | L | 981 | I | 2 (geo) | 20200406 |
| EPI_ISL_508332 | Spike | hCoV-19/India/KA-IB58/2020 | L | 981 | P | 1 | 20200527 |
| EPI_ISL_450716 | Spike | hCoV-19/USA/WI-UW-362/2020 | L | 981 | F | 5 (geo) | 20200417 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | L | 981 | W | 1 | 20200329 |
| EPI_ISL_766219 | Spike | hCoV-19/England/205261952/2020 | S | 982 | A | 30489 (geo) | 20200000 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | S | 982 | C | 1 | 20200329 |
| EPI_ISL_546012 | Spike | hCoV-19/USA/TX-HMH-6459/2020 | S | 982 | L | 2 (geo) | 20200627 |
| EPI_ISL_789115 | Spike | hCoV-19/USA/TX-HMH-MCoV-11289/2020 | L | 984 | F | 3 (geo) | 20200904 |
| EPI_ISL_667443 | Spike | hCoV-19/USA/OR-OHSU-2978/2020 | L | 984 | P | 1 | 20200909 |
| EPI_ISL_784561 | Spike | hCoV-19/USA/TX-HMH-MCoV-18213/2020 | D | 985 | N | 3 (geo) | 20201111 |
| EPI_ISL_559632 | Spike | hCoV-19/England/ALDP-4AD915/2020 | K | 986 | R | 44 (geo) | 20200609 |
| EPI_ISL_501073 | Spike | hCoV-19/USA/CO-UW-MAYO36/2020 | K | 986 | Q | 2 (geo) | 20200318 |
| EPI_ISL_499538 | Spike | hCoV-19/England/LIVE-A69B6/2020 | K | 986 | N | 2 (geo) | 20200319 |
| EPI_ISL_482011 | Spike | hCoV-19/England/BRIS-12DE02/2020 | K | 986 | I | 3 (geo) | 20200531 |
| EPI_ISL_568497 | Spike | hCoV-19/Iran/K1r-54/2020 | V | 987 | F | 5 (geo) | 20200320 |
| EPI_ISL_456609 | Spike | hCoV-19/Timor-Leste/TL12/2020 | V | 987 | S | 1 | 20200412 |
| EPI_ISL_835297 | Spike | hCoV-19/England/QEUH-EFA3C6/2021 | V | 987 | I | 1 | 20210105 |
| EPI_ISL_748611 | Spike | hCoV-19/Denmark/DCGC-18876/2020 | A | 989 | S | 1 | 20201207 |
| EPI_ISL_788058 | Spike | hCoV-19/USA/TX-HMH-MCoV-12906/2020 | A | 989 | D | 1 | 20200818 |
| EPI_ISL_466907 | Spike | hCoV-19/Germany/BY-MVP-0254/2020 | E | 990 | A | 1 | 20200504 |
| EPI_ISL_519879 | Spike | hCoV-19/Australia/VIC5076/2020 | E | 990 | Q | 3 (geo) | 20200717 |
| EPI_ISL_437536 | Spike | hCoV-19/India/WB-S1/2020 | V | 991 | A | 2 (geo) | 20200319 |
| EPI_ISL_594820 | Spike | hCoV-19/Scotland/EDB8044/2020 | V | 991 | L | 6 (geo) | 20201001 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | V | 991 | M | 1 | 20200000 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | I | 993 | V | 3 (geo) | 20200100 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | D | 994 | N | 1 | 20200000 |
| EPI_ISL_788666 | Spike | hCoV-19/USA/TX-HMH-MCoV-13546/2020 | D | 994 | V | 1 | 20200822 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | D | 994 | S | 1 | 20200408 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | R | 995 | L | 1 | 20200000 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | L | 996 | Q | 1 | 20200331 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | L | 996 | V | 1 | 20200408 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | I | 997 | K | 1 | 20200331 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | I | 997 | L | 2 (geo) | 20200000 |
| EPI_ISL_500623 | Spike | hCoV-19/Australia/NSW2128/2020 | I | 997 | T | 1 | 20200430 |
| EPI_ISL_678062 | Spike | hCoV-19/Saudi Arabia/KAUST-MAKKAH123/2020 | T | 998 | I | 4 (geo) | 20200324 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | T | 998 | S | 1 | 20200331 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | T | 998 | L | 1 | 20200000 |
| EPI_ISL_438317 | Spike | hCoV-19/England/CAMB-76B13/2020 | T | 998 | V | 1 | 20200330 |
| EPI_ISL_860344 | Spike | hCoV-19/Germany/NW-KRO-027/2020 | G | 999 | S | 1 | 20200616 |
| EPI_ISL_784906 | Spike | hCoV-19/USA/TX-HMH-MCoV-18558/2020 | G | 999 | V | 1 | 20201120 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | G | 999 | E | 1 | 20200331 |
| EPI_ISL_613804 | Spike | hCoV-19/USA/FL-BPHL-1937/2020 | G | 999 | C | 1 | 20200408 |
| EPI_ISL_620913 | Spike | hCoV-19/Denmark/DCGC-5588/2020 | R | 1000 | C | 1 | 20200928 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | R | 1000 | L | 1 | 20200331 |
| EPI_ISL_438317 | Spike | hCoV-19/England/CAMB-76B13/2020 | R | 1000 | P | 1 | 20200330 |
| EPI_ISL_678298 | Spike | hCoV-19/Australia/NSW2106/2020 | L | 1001 | F | 2 (geo) | 20200413 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | L | 1001 | T | 1 | 20200408 |
| EPI_ISL_456656 | Spike | hCoV-19/USA/UN-NR-52282/2020 | Q | 1002 | E | 2 (geo) | 20200323 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | Q | 1002 | L | 3 (geo) | 20200331 |
| EPI_ISL_438317 | Spike | hCoV-19/England/CAMB-76B13/2020 | Q | 1002 | V | 1 | 20200330 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | S | 1003 | I | 2 (geo) | 20200331 |
| EPI_ISL_438317 | Spike | hCoV-19/England/CAMB-76B13/2020 | S | 1003 | Q | 1 | 20200330 |
| EPI_ISL_837442 | Spike | hCoV-19/Italy/CAM-TIGEM-1298/2020 | S | 1003 | N | 1 | 20201224 |
| EPI_ISL_438317 | Spike | hCoV-19/England/CAMB-76B13/2020 | L | 1004 | V | 1 | 20200330 |
| EPI_ISL_761926 | Spike | hCoV-19/England/QEUH-C92D79/2020 | L | 1004 | F | 1 | 20201216 |
| EPI_ISL_438317 | Spike | hCoV-19/England/CAMB-76B13/2020 | Q | 1005 | L | 3 (geo) | 20200330 |
| EPI_ISL_454553 | Spike | hCoV-19/India/MH-NIV-8187/2020 | Q | 1005 | H | 7 (geo) | 20200402 |
| EPI_ISL_493198 | Spike | hCoV-19/Taiwan/NCKUH-002/2020 | T | 1006 | I | 75 (geo) | 20200316 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | T | 1006 | L | 1 | 20200331 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | T | 1006 | V | 1 | 20200000 |
| EPI_ISL_832081 | Spike | hCoV-19/USA/CA-SC210003/2020 | T | 1006 | S | 1 | 20201231 |
| EPI_ISL_438317 | Spike | hCoV-19/England/CAMB-76B13/2020 | T | 1006 | H | 1 | 20200330 |
| EPI_ISL_562463 | Spike | hCoV-19/Australia/VIC6995/2020 | Y | 1007 | H | 4 (geo) | 20200723 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | Y | 1007 | F | 2 (geo) | 20200000 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | Y | 1007 | L | 1 | 20200331 |
| EPI_ISL_617559 | Spike | hCoV-19/Denmark/DCGC-2379/2020 | V | 1008 | M | 2 (geo) | 20200810 |
| EPI_ISL_427168 | Spike | hCoV-19/USA/ID-UW-4100/2020 | V | 1008 | T | 1 | 20200329 |
| EPI_ISL_582811 | Spike | hCoV-19/Italy/SIC-IZSBM169-60/2020 | V | 1008 | L | 3 (geo) | 20200600 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | V | 1008 | K | 1 | 20200331 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | V | 1008 | I | 1 | 20200000 |
| EPI_ISL_519879 | Spike | hCoV-19/Australia/VIC5076/2020 | V | 1008 | A | 1 | 20200717 |
| EPI_ISL_489608 | Spike | hCoV-19/Scotland/GCVR-16FDDA/2020 | T | 1009 | I | 28 (geo) | 20200323 |
| EPI_ISL_570045 | Spike | hCoV-19/USA/WA-UW-4127/2020 | T | 1009 | N | 1 | 20200331 |
| EPI_ISL_580655 | Spike | hCoV-19/England/ALDP-9ED941/2020 | T | 1009 | S | 3 (geo) | 20200513 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | T | 1009 | C | 1 | 20200331 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | T | 1009 | L | 1 | 20200000 |
| EPI_ISL_727108 | Spike | hCoV-19/Wales/PHWC-49868F/2020 | T | 1009 | A | 3 (geo) | 20201124 |
| EPI_ISL_570045 | Spike | hCoV-19/USA/WA-UW-4127/2020 | Q | 1010 | K | 2 (geo) | 20200331 |
| EPI_ISL_802775 | Spike | hCoV-19/Spain/GA-ISCIII-2017306/2020 | Q | 1010 | L | 1 | 20201020 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | Q | 1011 | S | 1 | 20200331 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | Q | 1011 | V | 1 | 20200000 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | L | 1012 | V | 1 | 20200331 |
| EPI_ISL_462188 | Spike | hCoV-19/Belgium/CGP-0325334/2020 | L | 1012 | S | 2 (geo) | 20200325 |
| EPI_ISL_758968 | Spike | hCoV-19/Denmark/DCGC-21258/2020 | I | 1013 | L | 1 | 20201221 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | I | 1013 | Y | 1 | 20200331 |
| EPI_ISL_823788 | Spike | hCoV-19/Wales/PHWC-4ADDFB/2020 | I | 1013 | T | 4 (geo) | 20201229 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | I | 1013 | M | 1 | 20200000 |
| EPI_ISL_494149 | Spike | hCoV-19/Wales/PHWC-167D3C/2020 | R | 1014 | K | 21 (geo) | 20200419 |
| EPI_ISL_766882 | Spike | hCoV-19/USA/WY-WPHL-20095145/2020 | R | 1014 | T | 7 (geo) | 20201012 |
| EPI_ISL_510333 | Spike | hCoV-19/Spain/AR-IBV-005024/2020 | R | 1014 | I | 4 (geo) | 20200419 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | R | 1014 | L | 1 | 20200331 |
| EPI_ISL_414934 | Spike | hCoV-19/Shandong/LY001-2/2020 | R | 1014 | S | 2 (geo) | 20200121 |
| EPI_ISL_653290 | Spike | hCoV-19/USA/FL-BPHL-2137/2020 | A | 1015 | V | 2 (geo) | 20200626 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | A | 1015 | D | 1 | 20200331 |
| EPI_ISL_568485 | Spike | hCoV-19/Iran/K1r-10/2020 | A | 1015 | T | 2 (geo) | 20200328 |
| EPI_ISL_494626 | Spike | hCoV-19/USA/CA-ALSR-1503/2020 | A | 1016 | S | 4 (geo) | 20200420 |
| EPI_ISL_567633 | Spike | hCoV-19/England/ALDP-9C57BE/2020 | A | 1016 | T | 16 (geo) | 20200910 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | A | 1016 | N | 1 | 20200331 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | A | 1016 | I | 1 | 20200408 |
| EPI_ISL_475631 | Spike | hCoV-19/USA/CA-CSMC21/2020 | E | 1017 | G | 1 | 20200325 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | E | 1017 | Q | 1 | 20200331 |
| EPI_ISL_568502 | Spike | hCoV-19/Iran/K1r-104/2020 | E | 1017 | K | 1 | 20200425 |
| EPI_ISL_469909 | Spike | hCoV-19/England/CAMB-1B2260/2020 | I | 1018 | V | 8 (geo) | 20200511 |
| EPI_ISL_868991 | Spike | hCoV-19/England/TFCI-26FF949/2020 | I | 1018 | M | 1 | 20201126 |
| EPI_ISL_516908 | Spike | hCoV-19/Israel/CVL1328/2020 | I | 1018 | T | 2 (geo) | 20200606 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | I | 1018 | K | 1 | 20200331 |
| EPI_ISL_665207 | Spike | hCoV-19/England/LOND-1250303/2020 | I | 1018 | F | 1 | 20200331 |
| EPI_ISL_413696 | Spike | hCoV-19/China/WF0009/2020 | I | 1018 | L | 2 (geo) | 20200100 |
| EPI_ISL_568487 | Spike | hCoV-19/Iran/K1r-15/2020 | R | 1019 | K | 2 (geo) | 20200320 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | R | 1019 | E | 1 | 20200331 |
| EPI_ISL_741695 | Spike | hCoV-19/England/PORT-2D5309/2020 | A | 1020 | V | 212 (geo) | 20200000 |
| EPI_ISL_768838 | Spike | hCoV-19/Morocco/FMP-39/2020 | A | 1020 | S | 796 (geo) | 20200000 |
| EPI_ISL_738310 | Spike | hCoV-19/USA/CT-Yale-397/2020 | A | 1020 | T | 3 (geo) | 20200505 |
| EPI_ISL_479683 | Spike | hCoV-19/Japan/TKYVE11964/2020 | A | 1020 | D | 2 (geo) | 20200400 |
| EPI_ISL_413696 | Spike | hCoV-19/China/WF0009/2020 | A | 1020 | L | 2 (geo) | 20200100 |
| EPI_ISL_439641 | Spike | hCoV-19/England/CAMB-72A47/2020 | S | 1021 | F | 18 (geo) | 20200323 |
| EPI_ISL_481046 | Spike | hCoV-19/Spain/MD-IBV-004962/2020 | S | 1021 | Y | 14 (geo) | 20200504 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | S | 1021 | I | 1 | 20200331 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | S | 1021 | A | 1 | 20201124 |
| EPI_ISL_413696 | Spike | hCoV-19/China/WF0009/2020 | S | 1021 | K | 1 | 20200100 |
| EPI_ISL_568485 | Spike | hCoV-19/Iran/K1r-10/2020 | S | 1021 | P | 1 | 20200328 |
| EPI_ISL_432290 | Spike | hCoV-19/Wales/PHWC-2730A/2020 | A | 1022 | S | 31 (geo) | 20200330 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | A | 1022 | F | 1 | 20200331 |
| EPI_ISL_413696 | Spike | hCoV-19/China/WF0009/2020 | A | 1022 | C | 1 | 20200100 |
| EPI_ISL_698952 | Spike | hCoV-19/United Arab Emirates/0813/2020 | N | 1023 | S | 4 (geo) | 20200519 |
| EPI_ISL_812824 | Spike | hCoV-19/Egypt/CCHE57357-A-51/2020 | N | 1023 | D | 1 | 20200711 |
| EPI_ISL_492427 | Spike | hCoV-19/England/BRIS-1854248/2020 | N | 1023 | Y | 1 | 20200428 |
| EPI_ISL_427291 | Spike | hCoV-19/USA/OH-OSUP0019/2020 | N | 1023 | V | 1 | 20200331 |
| EPI_ISL_413696 | Spike | hCoV-19/China/WF0009/2020 | N | 1023 | K | 4 (geo) | 20200100 |
| EPI_ISL_801712 | Spike | hCoV-19/Chile/Santiago-PUC_MVL_0191/2020 | L | 1024 | R | 3 (geo) | 20200417 |
| EPI_ISL_788039 | Spike | hCoV-19/USA/TX-HMH-MCoV-12887/2020 | L | 1024 | I | 3 (geo) | 20200818 |
| EPI_ISL_440991 | Spike | hCoV-19/England/LOND-D380E/2020 | L | 1024 | F | 6 (geo) | 20200402 |
| EPI_ISL_486869 | Spike | hCoV-19/Senegal/6762/2020 | L | 1024 | M | 1 | 20200421 |
| EPI_ISL_476794 | Spike | hCoV-19/USA/CA-CZB-1777/2020 | L | 1024 | P | 1 | 20200330 |
| EPI_ISL_511984 | Spike | hCoV-19/Switzerland/VD-ETHZ-210002/2020 | A | 1025 | S | 2 (geo) | 20200717 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | A | 1025 | M | 1 | 20201124 |
| EPI_ISL_486869 | Spike | hCoV-19/Senegal/6762/2020 | A | 1025 | W | 1 | 20200421 |
| EPI_ISL_459092 | Spike | hCoV-19/England/BRIS-125F8F/2020 | A | 1026 | S | 70 (geo) | 20200410 |
| EPI_ISL_470492 | Spike | hCoV-19/England/CAMB-801AB/2020 | A | 1026 | T | 4 (geo) | 20200409 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | A | 1026 | K | 1 | 20201124 |
| EPI_ISL_472391 | Spike | hCoV-19/England/NOTT-111C70/2020 | A | 1026 | V | 3 (geo) | 20200603 |
| EPI_ISL_568485 | Spike | hCoV-19/Iran/K1r-10/2020 | A | 1026 | P | 1 | 20200328 |
| EPI_ISL_542201 | Spike | hCoV-19/Italy/LOM-UniMI-L214/2020 | T | 1027 | I | 166 (geo) | 20200312 |
| EPI_ISL_432900 | Spike | hCoV-19/England/NOTT-10DF8D/2020 | T | 1027 | S | 11 (geo) | 20200302 |
| EPI_ISL_679579 | Spike | hCoV-19/England/LOND-12F07FA/2020 | T | 1027 | A | 1 | 20201117 |
| EPI_ISL_783128 | Spike | hCoV-19/England/MILK-BAADE8/2020 | T | 1027 | N | 1 | 20201118 |
| EPI_ISL_833327 | Spike | hCoV-19/Italy/ABR-IZSGC-369548/2020 | K | 1028 | G | 1 | 20201228 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | K | 1028 | T | 1 | 20201124 |
| EPI_ISL_699730 | Spike | hCoV-19/India/MH-ACTREC-074/2020 | M | 1029 | I | 13 (geo) | 20200518 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | M | 1029 | L | 1 | 20201124 |
| EPI_ISL_460802 | Spike | hCoV-19/Netherlands/Overijssel_13/2020 | M | 1029 | V | 2 (geo) | 20200409 |
| EPI_ISL_486667 | Spike | hCoV-19/India/KA-InStem-NCBS-0091/2020 | S | 1030 | L | 3 (geo) | 20200000 |
| EPI_ISL_606328 | Spike | hCoV-19/England/MILK-A7D74B/2020 | S | 1030 | A | 3 (geo) | 20201011 |
| EPI_ISL_486869 | Spike | hCoV-19/Senegal/6762/2020 | S | 1030 | H | 1 | 20200421 |
| EPI_ISL_615996 | Spike | hCoV-19/Denmark/DCGC-3174/2020 | E | 1031 | D | 3 (geo) | 20200824 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | E | 1031 | Q | 1 | 20201124 |
| EPI_ISL_500781 | Spike | hCoV-19/Norway/2858/2020 | C | 1032 | G | 1 | 20200702 |
| EPI_ISL_463404 | Spike | hCoV-19/USA/WA-S914/2020 | C | 1032 | R | 1 | 20200427 |
| EPI_ISL_465376 | Spike | hCoV-19/England/20174000304/2020 | V | 1033 | L | 3 (geo) | 20200420 |
| EPI_ISL_481242 | Spike | hCoV-19/USA/MN-MDH-1224/2020 | V | 1033 | A | 7 (geo) | 20200606 |
| EPI_ISL_616788 | Spike | hCoV-19/Denmark/DCGC-3011/2020 | V | 1033 | Y | 1 | 20200824 |
| EPI_ISL_839135 | Spike | hCoV-19/England/LOND-12F419E/2021 | V | 1033 | I | 1 | 20210106 |
| EPI_ISL_661894 | Spike | hCoV-19/England/QEUH-B7EBD4/2020 | L | 1034 | I | 5 (geo) | 20201114 |
| EPI_ISL_819295 | Spike | hCoV-19/Spain/CT-HUVH-49385/2020 | G | 1035 | V | 14 (geo) | 20200429 |
| EPI_ISL_616788 | Spike | hCoV-19/Denmark/DCGC-3011/2020 | G | 1035 | D | 1 | 20200824 |
| EPI_ISL_482727 | Spike | hCoV-19/South Africa/KRISP-0254/2020 | Q | 1036 | G | 1 | 20200614 |
| EPI_ISL_616788 | Spike | hCoV-19/Denmark/DCGC-3011/2020 | Q | 1036 | N | 1 | 20200824 |
| EPI_ISL_450556 | Spike | hCoV-19/USA/UT-03703/2020 | Q | 1036 | K | 2 (geo) | 20200408 |
| EPI_ISL_520712 | Spike | hCoV-19/United Arab Emirates/L3300059655/2020 | Q | 1036 | L | 1 | 20200606 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | S | 1037 | P | 6 (geo) | 20200310 |
| EPI_ISL_616788 | Spike | hCoV-19/Denmark/DCGC-3011/2020 | S | 1037 | Q | 1 | 20200824 |
| EPI_ISL_605924 | Spike | hCoV-19/Gabon/34GAB/2020 | K | 1038 | A | 4 (geo) | 20200310 |
| EPI_ISL_812824 | Spike | hCoV-19/Egypt/CCHE57357-A-51/2020 | K | 1038 | R | 2 (geo) | 20200711 |
| EPI_ISL_665662 | Spike | hCoV-19/Wales/QEUH-B2C4CB/2020 | K | 1038 | N | 1 | 20201102 |
| EPI_ISL_752669 | Spike | hCoV-19/USA/HI-H200106/2020 | K | 1038 | I | 1 | 20200420 |
| EPI_ISL_489535 | Spike | hCoV-19/England/CAMB-1AD59C/2020 | R | 1039 | K | 1 | 20200425 |
| EPI_ISL_481110 | Spike | hCoV-19/India/OR-ILSCV25367/2020 | R | 1039 | T | 1 | 20200519 |
| EPI_ISL_787358 | Spike | hCoV-19/USA/TX-HMH-MCoV-14072/2020 | R | 1039 | S | 1 | 20200814 |
| EPI_ISL_784742 | Spike | hCoV-19/USA/TX-HMH-MCoV-18394/2020 | R | 1039 | I | 1 | 20201118 |
| EPI_ISL_765521 | Spike | hCoV-19/USA/NY-Wadsworth-290320-01/2020 | V | 1040 | F | 99 (geo) | 20200000 |
| EPI_ISL_822794 | Spike | hCoV-19/Wales/PHWC-4B035D/2020 | V | 1040 | A | 1 | 20201231 |
| EPI_ISL_626486 | Spike | hCoV-19/USA/IL-NM-0960/2020 | V | 1040 | I | 1 | 20200527 |
| EPI_ISL_465638 | Spike | hCoV-19/England/20198117904/2020 | V | 1040 | G | 1 | 20200507 |
| EPI_ISL_454523 | Spike | hCoV-19/India/MH-NIV-11699/2020 | D | 1041 | G | 4 (geo) | 20200419 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | D | 1041 | V | 1 | 20200324 |
| EPI_ISL_430637 | Spike | hCoV-19/Australia/VIC1262/2020 | F | 1042 | T | 1 | 20200412 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | F | 1042 | L | 2 (geo) | 20201105 |
| EPI_ISL_676168 | Spike | hCoV-19/England/MILK-B96A06/2020 | F | 1042 | I | 1 | 20201113 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | C | 1043 | V | 7 (geo) | 20200324 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | C | 1043 | W | 1 | 20201105 |
| EPI_ISL_494679 | Spike | hCoV-19/USA/CA-ALSR-1592/2020 | C | 1043 | F | 2 (geo) | 20200425 |
| EPI_ISL_516904 | Spike | hCoV-19/Israel/CVL1195/2020 | C | 1043 | S | 1 | 20200629 |
| EPI_ISL_430637 | Spike | hCoV-19/Australia/VIC1262/2020 | G | 1044 | R | 1 | 20200412 |
| EPI_ISL_463405 | Spike | hCoV-19/USA/WA-S915/2020 | G | 1044 | E | 1 | 20200427 |
| EPI_ISL_854053 | Spike | hCoV-19/Austria/CeMM1620/2020 | K | 1045 | N | 45 (geo) | 20200000 |
| EPI_ISL_542085 | Spike | hCoV-19/USA/NMDOH-2020322366/2020 | K | 1045 | Q | 2 (geo) | 20200901 |
| EPI_ISL_690792 | Spike | hCoV-19/Japan/PG-2660/2020 | K | 1045 | M | 6 (geo) | 20200400 |
| EPI_ISL_710555 | Spike | hCoV-19/Croatia/Zagreb-14/2020 | K | 1045 | R | 18 (geo) | 20200817 |
| EPI_ISL_455102 | Spike | hCoV-19/Sweden/20-07896/2020 | K | 1045 | E | 4 (geo) | 20200427 |
| EPI_ISL_454166 | Spike | hCoV-19/Portugal/PT0442/2020 | K | 1045 | D | 1 | 20200323 |
| EPI_ISL_525934 | Spike | hCoV-19/USA/OR-OHSU-0951/2020 | K | 1045 | T | 1 | 20200703 |
| EPI_ISL_454523 | Spike | hCoV-19/India/MH-NIV-11699/2020 | G | 1046 | S | 4 (geo) | 20200419 |
| EPI_ISL_856715 | Spike | hCoV-19/Italy/VEN-PD04/2020 | G | 1046 | V | 1 | 20200308 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | G | 1046 | E | 2 (geo) | 20200324 |
| EPI_ISL_438317 | Spike | hCoV-19/England/CAMB-76B13/2020 | G | 1046 | K | 1 | 20200330 |
| EPI_ISL_788051 | Spike | hCoV-19/USA/TX-HMH-MCoV-12899/2020 | G | 1046 | C | 1 | 20200818 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | Y | 1047 | R | 2 (geo) | 20200324 |
| EPI_ISL_594159 | Spike | hCoV-19/Israel/ISR_NH_GD1_0714/2020 | Y | 1047 | H | 3 (geo) | 20200714 |
| EPI_ISL_631319 | Spike | hCoV-19/Germany/NW-HHU-316/2020 | Y | 1047 | F | 1 | 20201006 |
| EPI_ISL_452006 | Spike | hCoV-19/Denmark/ALAB-HH-125/2020 | H | 1048 | Y | 4 (geo) | 20200311 |
| EPI_ISL_856720 | Spike | hCoV-19/Italy/VEN-PD09/2020 | H | 1048 | N | 1 | 20200331 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | H | 1048 | A | 2 (geo) | 20200324 |
| EPI_ISL_476843 | Spike | hCoV-19/Greece/AUTH_1/2020 | H | 1048 | I | 1 | 20200309 |
| EPI_ISL_476843 | Spike | hCoV-19/Greece/AUTH_1/2020 | L | 1049 | I | 10 (geo) | 20200309 |
| EPI_ISL_494738 | Spike | hCoV-19/USA/CA-ALSR-1678/2020 | L | 1049 | F | 1 | 20200403 |
| EPI_ISL_563112 | Spike | hCoV-19/Australia/VIC10825/2020 | M | 1050 | I | 100 (geo) | 20200000 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | M | 1050 | L | 7 (geo) | 20200207 |
| EPI_ISL_434917 | Spike | hCoV-19/USA/TX-HMH0291/2020 | M | 1050 | V | 4 (geo) | 20200327 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | M | 1050 | S | 1 | 20201105 |
| EPI_ISL_735568 | Spike | hCoV-19/England/MILK-C61AF4/2020 | M | 1050 | T | 1 | 20201213 |
| EPI_ISL_636532 | Spike | hCoV-19/Netherlands/GE-RIVM-10325/2020 | S | 1051 | T | 2 (geo) | 20200320 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | S | 1051 | L | 2 (geo) | 20200324 |
| EPI_ISL_476843 | Spike | hCoV-19/Greece/AUTH_1/2020 | S | 1051 | C | 1 | 20200309 |
| EPI_ISL_542719 | Spike | hCoV-19/USA/TX-HMH-1428/2020 | F | 1052 | L | 230 (geo) | 20200502 |
| EPI_ISL_815513 | Spike | hCoV-19/Denmark/DCGC-27627/2020 | F | 1052 | I | 8 (geo) | 20201221 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | F | 1052 | Y | 1 | 20201105 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | F | 1052 | C | 2 (geo) | 20200324 |
| EPI_ISL_476843 | Spike | hCoV-19/Greece/AUTH_1/2020 | F | 1052 | P | 1 | 20200309 |
| EPI_ISL_495977 | Spike | hCoV-19/USA/WA-S1551/2020 | P | 1053 | T | 1 | 20200526 |
| EPI_ISL_484708 | Spike | hCoV-19/Belgium/ULG-10220/2020 | P | 1053 | L | 1 | 20200523 |
| EPI_ISL_423805 | Spike | hCoV-19/England/20132080404/2020 | P | 1053 | A | 1 | 20200324 |
| EPI_ISL_719400 | Spike | hCoV-19/England/CAMC-C3F41F/2020 | P | 1053 | Q | 1 | 20201210 |
| EPI_ISL_476843 | Spike | hCoV-19/Greece/AUTH_1/2020 | P | 1053 | S | 1 | 20200309 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | Q | 1054 | S | 3 (geo) | 20200324 |
| EPI_ISL_511923 | Spike | hCoV-19/India/MH-MW15/2020 | Q | 1054 | H | 2 (geo) | 20200501 |
| EPI_ISL_423805 | Spike | hCoV-19/England/20132080404/2020 | Q | 1054 | D | 1 | 20200324 |
| EPI_ISL_476843 | Spike | hCoV-19/Greece/AUTH_1/2020 | Q | 1054 | L | 2 (geo) | 20200309 |
| EPI_ISL_415634 | Spike | hCoV-19/Scotland/EDB007/2020 | S | 1055 | L | 9 (geo) | 20200306 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | S | 1055 | V | 1 | 20200420 |
| EPI_ISL_526804 | Spike | hCoV-19/USA/VA-DCLS-0583/2020 | S | 1055 | A | 7 (geo) | 20200317 |
| EPI_ISL_423805 | Spike | hCoV-19/England/20132080404/2020 | S | 1055 | I | 1 | 20200324 |
| EPI_ISL_815439 | Spike | hCoV-19/Denmark/DCGC-27872/2020 | S | 1055 | T | 1 | 20201221 |
| EPI_ISL_427767 | Spike | hCoV-19/Australia/NSW195/2020 | A | 1056 | V | 18 (geo) | 20200321 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | A | 1056 | S | 3 (geo) | 20200324 |
| EPI_ISL_423805 | Spike | hCoV-19/England/20132080404/2020 | A | 1056 | C | 1 | 20200324 |
| EPI_ISL_476843 | Spike | hCoV-19/Greece/AUTH_1/2020 | A | 1056 | Q | 1 | 20200309 |
| EPI_ISL_713698 | Spike | hCoV-19/Denmark/DCGC-15214/2020 | P | 1057 | L | 2 (geo) | 20201123 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | P | 1057 | T | 1 | 20200420 |
| EPI_ISL_423805 | Spike | hCoV-19/England/20132080404/2020 | P | 1057 | D | 1 | 20200324 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | P | 1057 | Q | 2 (geo) | 20200324 |
| EPI_ISL_476843 | Spike | hCoV-19/Greece/AUTH_1/2020 | P | 1057 | H | 1 | 20200309 |
| EPI_ISL_419721 | Spike | hCoV-19/Australia/VIC116/2020 | H | 1058 | Y | 47 (geo) | 20200319 |
| EPI_ISL_476843 | Spike | hCoV-19/Greece/AUTH_1/2020 | H | 1058 | L | 5 (geo) | 20200309 |
| EPI_ISL_423805 | Spike | hCoV-19/England/20132080404/2020 | H | 1058 | S | 2 (geo) | 20200324 |
| EPI_ISL_529538 | Spike | hCoV-19/England/ALDP-98056A/2020 | H | 1058 | R | 2 (geo) | 20200806 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | G | 1059 | W | 1 | 20200420 |
| EPI_ISL_423805 | Spike | hCoV-19/England/20132080404/2020 | G | 1059 | T | 1 | 20200324 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | G | 1059 | L | 2 (geo) | 20200324 |
| EPI_ISL_788291 | Spike | hCoV-19/USA/TX-HMH-MCoV-13140/2020 | G | 1059 | C | 1 | 20200827 |
| EPI_ISL_476843 | Spike | hCoV-19/Greece/AUTH_1/2020 | G | 1059 | M | 1 | 20200309 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | V | 1060 | C | 1 | 20200420 |
| EPI_ISL_423805 | Spike | hCoV-19/England/20132080404/2020 | V | 1060 | I | 4 (geo) | 20200324 |
| EPI_ISL_483706 | Spike | hCoV-19/Israel/n4278/2020 | V | 1060 | M | 2 (geo) | 20200324 |
| EPI_ISL_423214 | Spike | hCoV-19/England/201360119/2020 | V | 1060 | L | 4 (geo) | 20200325 |
| EPI_ISL_441957 | Spike | hCoV-19/England/SHEF-C3FDF/2020 | V | 1061 | I | 6 (geo) | 20200408 |
| EPI_ISL_430637 | Spike | hCoV-19/Australia/VIC1262/2020 | V | 1061 | C | 1 | 20200412 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | V | 1061 | S | 1 | 20200420 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | V | 1061 | L | 2 (geo) | 20200408 |
| EPI_ISL_423805 | Spike | hCoV-19/England/20132080404/2020 | V | 1061 | N | 1 | 20200324 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | V | 1061 | F | 4 (geo) | 20200000 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | F | 1062 | L | 7 (geo) | 20200420 |
| EPI_ISL_430637 | Spike | hCoV-19/Australia/VIC1262/2020 | F | 1062 | W | 1 | 20200412 |
| EPI_ISL_787125 | Spike | hCoV-19/USA/TX-HMH-MCoV-13832/2020 | F | 1062 | S | 1 | 20200817 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | F | 1062 | I | 2 (geo) | 20200408 |
| EPI_ISL_780036 | Spike | hCoV-19/Spain/MD-IBV-99012434/2020 | F | 1062 | Y | 1 | 20201021 |
| EPI_ISL_425763 | Spike | hCoV-19/Scotland/CVR34/2020 | L | 1063 | F | 185 (geo) | 20200312 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | L | 1063 | K | 2 (geo) | 20200000 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | H | 1064 | A | 1 | 20200420 |
| EPI_ISL_788713 | Spike | hCoV-19/USA/TX-HMH-MCoV-13603/2020 | H | 1064 | Y | 2 (geo) | 20200821 |
| EPI_ISL_571907 | Spike | hCoV-19/USA/WA-QDX-1085/2020 | V | 1065 | L | 90 (geo) | 20200319 |
| EPI_ISL_837601 | Spike | hCoV-19/Mexico/CMX-INER-0197/2020 | V | 1065 | A | 10 (geo) | 20200805 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | V | 1065 | Y | 1 | 20200100 |
| EPI_ISL_430637 | Spike | hCoV-19/Australia/VIC1262/2020 | V | 1065 | Q | 1 | 20200412 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | V | 1065 | C | 2 (geo) | 20200420 |
| EPI_ISL_619919 | Spike | hCoV-19/Denmark/DCGC-5632/2020 | V | 1065 | M | 1 | 20200928 |
| EPI_ISL_422094 | Spike | hCoV-19/Wales/PHWC-2617A/2020 | T | 1066 | N | 11 (geo) | 20200325 |
| EPI_ISL_703338 | Spike | hCoV-19/England/PORT-2F5154/2020 | T | 1066 | I | 8 (geo) | 20200000 |
| EPI_ISL_429292 | Spike | hCoV-19/Denmark/ALAB-HH36/2020 | T | 1066 | V | 7 (geo) | 20200312 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | T | 1066 | D | 1 | 20200420 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | T | 1066 | Q | 2 (geo) | 20200000 |
| EPI_ISL_649609 | Spike | hCoV-19/Scotland/QEUH-B128DB/2020 | T | 1066 | A | 1 | 20201102 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | Y | 1067 | M | 1 | 20200702 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | Y | 1067 | L | 1 | 20200420 |
| EPI_ISL_769871 | Spike | hCoV-19/Gibraltar/205121240/2020 | Y | 1067 | A | 2 (geo) | 20200000 |
| EPI_ISL_426629 | Spike | hCoV-19/Taiwan/TSGH-01/2020 | Y | 1067 | F | 1 | 20200207 |
| EPI_ISL_524064 | Spike | hCoV-19/USA/TX-DSHS-0184/2020 | V | 1068 | F | 400 (geo) | 20200316 |
| EPI_ISL_837748 | Spike | hCoV-19/Mexico/CMX-INER-0152/2020 | V | 1068 | L | 14 (geo) | 20200627 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | V | 1068 | S | 1 | 20200702 |
| EPI_ISL_490062 | Spike | hCoV-19/Singapore/612/2020 | V | 1068 | I | 31 (geo) | 20200510 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | V | 1068 | C | 1 | 20200420 |
| EPI_ISL_500872 | Spike | hCoV-19/Brazil/PE-IAM29/2020 | V | 1068 | D | 1 | 20200408 |
| EPI_ISL_455337 | Spike | hCoV-19/Spain/RI-ISCIII-201334/2020 | V | 1068 | A | 1 | 20200301 |
| EPI_ISL_766526 | Spike | hCoV-19/England/205260404/2020 | P | 1069 | S | 252 (geo) | 20200000 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | P | 1069 | L | 2 (geo) | 20200702 |
| EPI_ISL_646557 | Spike | hCoV-19/England/ALDP-B260AF/2020 | P | 1069 | T | 1 | 20201104 |
| EPI_ISL_789818 | Spike | hCoV-19/USA/TX-HMH-MCoV-12817/2020 | P | 1069 | H | 3 (geo) | 20200818 |
| EPI_ISL_864867 | Spike | hCoV-19/England/CAMB-A9C5A6/2020 | A | 1070 | V | 94 (geo) | 20200000 |
| EPI_ISL_632202 | Spike | hCoV-19/USA/NY-NYCPHL-000825/2020 | A | 1070 | S | 123 (geo) | 20200326 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | A | 1070 | H | 1 | 20200702 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | A | 1070 | C | 1 | 20200420 |
| EPI_ISL_589516 | Spike | hCoV-19/England/ALDP-9ED844/2020 | A | 1070 | T | 5 (geo) | 20200505 |
| EPI_ISL_763186 | Spike | hCoV-19/Netherlands/UT-EMC-234/2020 | Q | 1071 | L | 190 (geo) | 20200000 |
| EPI_ISL_496134 | Spike | hCoV-19/USA/WA-S1708/2020 | Q | 1071 | H | 13 (geo) | 20200531 |
| EPI_ISL_768066 | Spike | hCoV-19/Switzerland/BL-ETHZ-420569/2020 | Q | 1071 | S | 3 (geo) | 20201222 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | Q | 1071 | K | 3 (geo) | 20200702 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | Q | 1071 | T | 1 | 20200420 |
| EPI_ISL_508238 | Spike | hCoV-19/India/MH-GA43/2020 | Q | 1071 | E | 1 | 20200620 |
| EPI_ISL_479428 | Spike | hCoV-19/Wales/PHWC-16516F/2020 | E | 1072 | Q | 16 (geo) | 20200416 |
| EPI_ISL_470475 | Spike | hCoV-19/England/CAMB-80A55/2020 | E | 1072 | K | 3 (geo) | 20200409 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | E | 1072 | R | 1 | 20200420 |
| EPI_ISL_483480 | Spike | hCoV-19/USA/CA-ALSR-1044-SAN/2020 | E | 1072 | V | 1 | 20200619 |
| EPI_ISL_479065 | Spike | hCoV-19/England/OXON-B1A3D/2020 | K | 1073 | N | 1214 (geo) | 20200000 |
| EPI_ISL_438369 | Spike | hCoV-19/England/CAMB-762B4/2020 | K | 1073 | T | 321 (geo) | 20200329 |
| EPI_ISL_854045 | Spike | hCoV-19/Austria/CeMM1611/2020 | K | 1073 | E | 20 (geo) | 20200000 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | K | 1073 | R | 9 (geo) | 20200000 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | K | 1073 | S | 1 | 20201124 |
| EPI_ISL_841800 | Spike | hCoV-19/England/PORT-2D79C9/2020 | K | 1073 | M | 2 (geo) | 20201216 |
| EPI_ISL_498070 | Spike | hCoV-19/South Africa/KRISP-0502/2020 | N | 1074 | H | 3 (geo) | 20200711 |
| EPI_ISL_635642 | Spike | hCoV-19/USA/CA-ALSR-2714/2020 | N | 1074 | K | 6 (geo) | 20200722 |
| EPI_ISL_463942 | Spike | hCoV-19/Canada/QC_AT7/2020 | N | 1074 | D | 37 (geo) | 20200403 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | N | 1074 | T | 2 (geo) | 20200000 |
| EPI_ISL_631471 | Spike | hCoV-19/USA/WI-WSLH-200715/2020 | N | 1074 | Y | 19 (geo) | 20200626 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | N | 1074 | E | 1 | 20200420 |
| EPI_ISL_570770 | Spike | hCoV-19/USA/WA-UW-24901/2020 | F | 1075 | Y | 4 (geo) | 20200811 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | F | 1075 | S | 1 | 20200000 |
| EPI_ISL_673563 | Spike | hCoV-19/England/CAMC-B992B0/2020 | F | 1075 | L | 1 | 20201114 |
| EPI_ISL_426629 | Spike | hCoV-19/Taiwan/TSGH-01/2020 | T | 1076 | S | 6 (geo) | 20200207 |
| EPI_ISL_430816 | Spike | hCoV-19/Argentina/PAIS-A0025/2020 | T | 1076 | I | 19 (geo) | 20200418 |
| EPI_ISL_500972 | Spike | hCoV-19/Northern Ireland/NIRE-10633D/2020 | T | 1076 | A | 1 | 20200502 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | T | 1076 | Q | 1 | 20200000 |
| EPI_ISL_433161 | Spike | hCoV-19/Scotland/EDB1965/2020 | T | 1077 | A | 3 (geo) | 20200417 |
| EPI_ISL_728293 | Spike | hCoV-19/Germany/TH-IIMK-CaSe-4/2020 | T | 1077 | I | 6 (geo) | 20200403 |
| EPI_ISL_435073 | Spike | hCoV-19/India/DL-NCDC-02157/2020 | T | 1077 | S | 1 | 20200326 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | T | 1077 | L | 1 | 20200000 |
| EPI_ISL_780456 | Spike | hCoV-19/USA/TX-HMH-MCoV-9470/2020 | T | 1077 | G | 2 (geo) | 20200703 |
| EPI_ISL_684876 | Spike | hCoV-19/Japan/PG-1266/2020 | A | 1078 | S | 833 (geo) | 20200000 |
| EPI_ISL_801617 | Spike | hCoV-19/Chile/Santiago-PUC_MVL_0026/2020 | A | 1078 | T | 96 (geo) | 20200325 |
| EPI_ISL_604907 | Spike | hCoV-19/USA/CA-QDX-2645/2020 | A | 1078 | V | 109 (geo) | 20200315 |
| EPI_ISL_779133 | Spike | hCoV-19/USA/WY-WPHL-20150292/2020 | A | 1078 | H | 1 | 20201124 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | A | 1078 | L | 1 | 20200000 |
| EPI_ISL_785873 | Spike | hCoV-19/USA/TX-HMH-MCoV-16189/2020 | A | 1078 | D | 1 | 20201029 |
| EPI_ISL_565483 | Spike | hCoV-19/Australia/VIC9284/2020 | P | 1079 | S | 69 (geo) | 20200000 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | P | 1079 | L | 3 (geo) | 20200000 |
| EPI_ISL_579336 | Spike | hCoV-19/New Zealand/20VR2718/2020 | P | 1079 | T | 8 (geo) | 20200000 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | P | 1079 | A | 2 (geo) | 20200418 |
| EPI_ISL_607193 | Spike | hCoV-19/England/ALDP-A6E543/2020 | A | 1080 | S | 3 (geo) | 20201015 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | A | 1080 | P | 1 | 20200000 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | A | 1080 | I | 1 | 20200418 |
| EPI_ISL_838942 | Spike | hCoV-19/England/LOND-12EA359/2021 | I | 1081 | M | 5 (geo) | 20210107 |
| EPI_ISL_541730 | Spike | hCoV-19/India/MH-NIV-59448/2020 | I | 1081 | V | 15 (geo) | 20200611 |
| EPI_ISL_835814 | Spike | hCoV-19/England/MILK-EC0B1C/2021 | I | 1081 | L | 2 (geo) | 20210102 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | I | 1081 | F | 1 | 20200000 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | I | 1081 | C | 1 | 20200418 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | C | 1082 | V | 1 | 20200000 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | C | 1082 | H | 1 | 20200418 |
| EPI_ISL_474992 | Spike | hCoV-19/Israel/CVL-n-6106/2020 | H | 1083 | Y | 29 (geo) | 20200315 |
| EPI_ISL_536564 | Spike | hCoV-19/Peru/LAM-INS-171/2020 | H | 1083 | R | 4 (geo) | 20200401 |
| EPI_ISL_458186 | Spike | hCoV-19/Belgium/Rega-0327216/2020 | H | 1083 | Q | 25 (geo) | 20200327 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | H | 1083 | M | 1 | 20200000 |
| EPI_ISL_649900 | Spike | hCoV-19/England/204742185/2020 | D | 1084 | Y | 539 (geo) | 20200000 |
| EPI_ISL_686973 | Spike | hCoV-19/Japan/PG-7872/2020 | D | 1084 | G | 56 (geo) | 20200700 |
| EPI_ISL_580681 | Spike | hCoV-19/England/ALDP-9EDA8A/2020 | D | 1084 | H | 4 (geo) | 20200509 |
| EPI_ISL_619627 | Spike | hCoV-19/Denmark/DCGC-6579/2020 | D | 1084 | E | 21 (geo) | 20201012 |
| EPI_ISL_692041 | Spike | hCoV-19/Japan/PG-3790/2020 | D | 1084 | N | 7 (geo) | 20200400 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | D | 1084 | M | 1 | 20200000 |
| EPI_ISL_722178 | Spike | hCoV-19/India/MH-NCCS-NR-8740/2020 | D | 1084 | V | 1 | 20200701 |
| EPI_ISL_816736 | Spike | hCoV-19/England/TFCI-26F9FF2/2020 | G | 1085 | A | 196 (geo) | 20200410 |
| EPI_ISL_460730 | Spike | hCoV-19/Netherlands/NA_566/2020 | G | 1085 | L | 3 (geo) | 20200410 |
| EPI_ISL_571405 | Spike | hCoV-19/USA/WA-QDX-570/2020 | G | 1085 | R | 40 (geo) | 20200318 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | G | 1085 | S | 1 | 20200702 |
| EPI_ISL_565396 | Spike | hCoV-19/Australia/VIC9117/2020 | G | 1085 | V | 3 (geo) | 20200809 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | G | 1085 | E | 14 (geo) | 20200000 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | K | 1086 | Q | 1 | 20200702 |
| EPI_ISL_416589 | Spike | hCoV-19/Japan/DP0287/2020 | K | 1086 | R | 8 (geo) | 20200216 |
| EPI_ISL_775699 | Spike | hCoV-19/Germany/HH-hpi-p2310/2020 | K | 1086 | N | 3 (geo) | 20200318 |
| EPI_ISL_746395 | Spike | hCoV-19/USA/UT-UPHL-2012373063/2020 | K | 1086 | E | 3 (geo) | 20200619 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | K | 1086 | D | 1 | 20200418 |
| EPI_ISL_577920 | Spike | hCoV-19/Netherlands/ZH-EMC-490/2020 | A | 1087 | S | 188 (geo) | 20200000 |
| EPI_ISL_605109 | Spike | hCoV-19/Ireland/D-NVRL-20G32271/2020 | A | 1087 | V | 7 (geo) | 20200318 |
| EPI_ISL_738608 | Spike | hCoV-19/USA/CA-CZB-15174/2020 | A | 1087 | G | 6 (geo) | 20201123 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | A | 1087 | L | 1 | 20200702 |
| EPI_ISL_599317 | Spike | hCoV-19/England/QEUH-A0BA67/2020 | A | 1087 | T | 2 (geo) | 20201001 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | A | 1087 | D | 1 | 20200228 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | A | 1087 | H | 1 | 20200000 |
| EPI_ISL_456437 | Spike | hCoV-19/Australia/VIC1437/2020 | A | 1087 | K | 1 | 20200418 |
| EPI_ISL_483876 | Spike | hCoV-19/India/GJ-GBRC275b/2020 | H | 1088 | R | 10 (geo) | 20200613 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | H | 1088 | L | 1 | 20200702 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | H | 1088 | Y | 11 (geo) | 20200228 |
| EPI_ISL_785808 | Spike | hCoV-19/USA/TX-HMH-MCoV-16124/2020 | H | 1088 | Q | 2 (geo) | 20201026 |
| EPI_ISL_568501 | Spike | hCoV-19/Iran/K1r-102/2020 | H | 1088 | D | 1 | 20200427 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | H | 1088 | T | 1 | 20200000 |
| EPI_ISL_429691 | Spike | hCoV-19/Brazil/MG-CV35/2020 | H | 1088 | N | 1 | 20200318 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | F | 1089 | L | 1 | 20200702 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | F | 1089 | S | 2 (geo) | 20200228 |
| EPI_ISL_483876 | Spike | hCoV-19/India/GJ-GBRC275b/2020 | F | 1089 | V | 2 (geo) | 20200613 |
| EPI_ISL_636059 | Spike | hCoV-19/USA/CA-ALSR-3507/2020 | P | 1090 | T | 1 | 20200811 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | P | 1090 | L | 3 (geo) | 20200000 |
| EPI_ISL_474459 | Spike | hCoV-19/Wales/PHWC-35679/2020 | P | 1090 | S | 4 (geo) | 20200424 |
| EPI_ISL_583882 | Spike | hCoV-19/Austria/CeMM1069/2020 | R | 1091 | L | 35 (geo) | 20200320 |
| EPI_ISL_559074 | Spike | hCoV-19/England/ALDP-523749/2020 | R | 1091 | C | 16 (geo) | 20200602 |
| EPI_ISL_560690 | Spike | hCoV-19/England/GSTT-5595/2020 | R | 1091 | H | 18 (geo) | 20200321 |
| EPI_ISL_722961 | Spike | hCoV-19/Belgium/ULG-11051/2020 | R | 1091 | G | 1 | 20201201 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | R | 1091 | V | 1 | 20200000 |
| EPI_ISL_474459 | Spike | hCoV-19/Wales/PHWC-35679/2020 | R | 1091 | S | 3 (geo) | 20200424 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | E | 1092 | D | 8 (geo) | 20200228 |
| EPI_ISL_500991 | Spike | hCoV-19/Northern Ireland/NIRE-106977/2020 | E | 1092 | V | 1 | 20200516 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | E | 1092 | K | 4 (geo) | 20200000 |
| EPI_ISL_654490 | Spike | hCoV-19/Spain/VC-IBV-98007321/2020 | E | 1092 | G | 2 (geo) | 20200920 |
| EPI_ISL_682311 | Spike | hCoV-19/Bahrain/340861249/2020 | E | 1092 | A | 3 (geo) | 20201014 |
| EPI_ISL_751495 | Spike | hCoV-19/France/OCC-177/2020 | G | 1093 | S | 2 (geo) | 20201005 |
| EPI_ISL_616788 | Spike | hCoV-19/Denmark/DCGC-3011/2020 | G | 1093 | L | 3 (geo) | 20200824 |
| EPI_ISL_408483 | Spike | hCoV-19/Shanghai/IVDC-SH-001/2020 | G | 1093 | A | 2 (geo) | 20200120 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | G | 1093 | V | 2 (geo) | 20200000 |
| EPI_ISL_517786 | Spike | hCoV-19/USA/FL-BPHL-0896/2020 | V | 1094 | I | 25 (geo) | 20200410 |
| EPI_ISL_594271 | Spike | hCoV-19/USA/UT-UPHL-201026014/2020 | V | 1094 | A | 5 (geo) | 20200622 |
| EPI_ISL_452498 | Spike | hCoV-19/Spain/NC-IBV-001403/2020 | V | 1094 | F | 2 (geo) | 20200319 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | V | 1094 | S | 1 | 20200000 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | F | 1095 | L | 5 (geo) | 20200000 |
| EPI_ISL_814550 | Spike | hCoV-19/Wales/PHWC-4A6C9B/2020 | F | 1095 | S | 1 | 20201217 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | V | 1096 | F | 3 (geo) | 20200000 |
| EPI_ISL_529699 | Spike | hCoV-19/Wales/PHWC-169CA6/2020 | V | 1096 | A | 2 (geo) | 20200818 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | V | 1096 | P | 1 | 20201105 |
| EPI_ISL_489518 | Spike | hCoV-19/England/CAMB-1AC542/2020 | S | 1097 | L | 9 (geo) | 20200422 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | S | 1097 | M | 1 | 20200702 |
| EPI_ISL_449186 | Spike | hCoV-19/Scotland/CVR3141/2020 | S | 1097 | T | 2 (geo) | 20200428 |
| EPI_ISL_786628 | Spike | hCoV-19/USA/TX-HMH-MCoV-15144/2020 | S | 1097 | P | 1 | 20201018 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | S | 1097 | Q | 1 | 20200000 |
| EPI_ISL_729890 | Spike | hCoV-19/Peru/LIM-UPCH-0196/2020 | S | 1097 | A | 1 | 20201014 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | N | 1098 | M | 2 (geo) | 20200000 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | N | 1098 | V | 1 | 20201105 |
| EPI_ISL_707988 | Spike | hCoV-19/Germany/SL-SU-10451160/2020 | N | 1098 | K | 1 | 20201015 |
| EPI_ISL_524048 | Spike | hCoV-19/Russia/SPE-RII-6425V/2020 | N | 1098 | S | 2 (geo) | 20200415 |
| EPI_ISL_475581 | Spike | hCoV-19/USA/CA-CSMC106/2020 | G | 1099 | D | 89 (geo) | 20200402 |
| EPI_ISL_699701 | Spike | hCoV-19/India/MH-ACTREC-045/2020 | G | 1099 | V | 3 (geo) | 20200512 |
| EPI_ISL_860528 | Spike | hCoV-19/Germany/NW-KRO-211/2020 | G | 1099 | E | 1 | 20200702 |
| EPI_ISL_633289 | Spike | hCoV-19/England/QEUH-AE4F0B/2020 | G | 1099 | S | 8 (geo) | 20201026 |
| EPI_ISL_488855 | Spike | hCoV-19/England/WSFT-25C17CF/2020 | G | 1099 | C | 1 | 20200424 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | G | 1099 | A | 1 | 20200000 |
| EPI_ISL_524606 | Spike | hCoV-19/England/CAMB-1AE74A/2020 | T | 1100 | K | 2 (geo) | 20200430 |
| EPI_ISL_860002 | Spike | hCoV-19/United Arab Emirates/4223/2020 | T | 1100 | I | 6 (geo) | 20200504 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | T | 1100 | H | 1 | 20200000 |
| EPI_ISL_816417 | Spike | hCoV-19/England/SHEF-10CD664/2020 | T | 1100 | S | 1 | 20201221 |
| EPI_ISL_604656 | Spike | hCoV-19/USA/CA-QDX-2362/2020 | H | 1101 | Y | 144 (geo) | 20200316 |
| EPI_ISL_561778 | Spike | hCoV-19/Australia/VIC7366/2020 | H | 1101 | Q | 8 (geo) | 20200726 |
| EPI_ISL_788815 | Spike | hCoV-19/USA/TX-HMH-MCoV-13722/2020 | H | 1101 | R | 3 (geo) | 20200818 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | H | 1101 | S | 1 | 20201105 |
| EPI_ISL_455629 | Spike | hCoV-19/South Africa/KRISP-003/2020 | H | 1101 | N | 2 (geo) | 20200430 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | H | 1101 | T | 1 | 20200000 |
| EPI_ISL_792392 | Spike | hCoV-19/Argentina/PAIS-A0322/2020 | H | 1101 | D | 1 | 20200505 |
| EPI_ISL_555518 | Spike | hCoV-19/England/ALDP-65D94F/2020 | W | 1102 | C | 2 (geo) | 20200703 |
| EPI_ISL_569494 | Spike | hCoV-19/France/PAC-IHU-0411/2020 | W | 1102 | L | 21 (geo) | 20200402 |
| EPI_ISL_447348 | Spike | hCoV-19/Israel/2113161/2020 | W | 1102 | S | 2 (geo) | 20200415 |
| EPI_ISL_617491 | Spike | hCoV-19/Denmark/DCGC-2190/2020 | W | 1102 | F | 3 (geo) | 20200810 |
| EPI_ISL_722178 | Spike | hCoV-19/India/MH-NCCS-NR-8740/2020 | W | 1102 | T | 2 (geo) | 20200701 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | W | 1102 | G | 2 (geo) | 20200000 |
| EPI_ISL_734167 | Spike | hCoV-19/France/BRE-IPP9965/2020 | F | 1103 | L | 8 (geo) | 20200000 |
| EPI_ISL_746304 | Spike | hCoV-19/USA/UT-UPHL-2012098996/2020 | F | 1103 | S | 6 (geo) | 20200815 |
| EPI_ISL_804852 | Spike | hCoV-19/USA/MD-DFS-PHL-0055/2020 | F | 1103 | C | 2 (geo) | 20200326 |
| EPI_ISL_522406 | Spike | hCoV-19/Dominican Republic/ICGEB-UNIBE024/2020 | F | 1103 | I | 1 | 20200228 |
| EPI_ISL_450421 | Spike | hCoV-19/Anhui/HN023/2020 | V | 1104 | L | 381 (geo) | 20200206 |
| EPI_ISL_816681 | Spike | hCoV-19/England/TFCI-26F98CA/2020 | V | 1104 | I | 39 (geo) | 20200000 |
| EPI_ISL_668446 | Spike | hCoV-19/England/204380344/2020 | V | 1104 | C | 1 | 20201023 |
| EPI_ISL_794822 | Spike | hCoV-19/Greece/CP0800977/2020 | V | 1104 | A | 1 | 20201230 |
| EPI_ISL_722178 | Spike | hCoV-19/India/MH-NCCS-NR-8740/2020 | T | 1105 | V | 2 (geo) | 20200701 |
| EPI_ISL_668446 | Spike | hCoV-19/England/204380344/2020 | T | 1105 | N | 1 | 20201023 |
| EPI_ISL_766035 | Spike | hCoV-19/Indonesia/JB-EIJK18/2020 | T | 1105 | P | 1 | 20200408 |
| EPI_ISL_722178 | Spike | hCoV-19/India/MH-NCCS-NR-8740/2020 | Q | 1106 | K | 3 (geo) | 20200701 |
| EPI_ISL_558234 | Spike | hCoV-19/England/MILK-66F889/2020 | Q | 1106 | R | 1 | 20200703 |
| EPI_ISL_548947 | Spike | hCoV-19/Iran/K1r-3/2020 | Q | 1106 | P | 2 (geo) | 20200320 |
| EPI_ISL_668446 | Spike | hCoV-19/England/204380344/2020 | Q | 1106 | T | 1 | 20201023 |
| EPI_ISL_814090 | Spike | hCoV-19/Turkey/HSGM-2002084/2020 | Q | 1106 | H | 1 | 20200804 |
| EPI_ISL_589518 | Spike | hCoV-19/England/ALDP-9EE087/2020 | R | 1107 | S | 37 (geo) | 20200506 |
| EPI_ISL_513130 | Spike | hCoV-19/SaudiArabia/KAUST-MADINAH343/2020 | R | 1107 | Q | 2 (geo) | 20200424 |
| EPI_ISL_457838 | Spike | hCoV-19/Kenya/NIC_266/2020 | R | 1107 | M | 8 (geo) | 20200324 |
| EPI_ISL_722178 | Spike | hCoV-19/India/MH-NCCS-NR-8740/2020 | R | 1107 | V | 2 (geo) | 20200701 |
| EPI_ISL_827467 | Spike | hCoV-19/Iceland/3770/2020 | R | 1107 | W | 1 | 20201013 |
| EPI_ISL_622362 | Spike | hCoV-19/Denmark/DCGC-6736/2020 | R | 1107 | K | 4 (geo) | 20200420 |
| EPI_ISL_829670 | Spike | hCoV-19/Iceland/5991/2020 | R | 1107 | T | 1 | 20201210 |
| EPI_ISL_722178 | Spike | hCoV-19/India/MH-NCCS-NR-8740/2020 | N | 1108 | S | 4 (geo) | 20200701 |
| EPI_ISL_513130 | Spike | hCoV-19/SaudiArabia/KAUST-MADINAH343/2020 | N | 1108 | K | 2 (geo) | 20200424 |
| EPI_ISL_783565 | Spike | hCoV-19/USA/TX-HMH-MCoV-19295/2020 | N | 1108 | I | 1 | 20201129 |
| EPI_ISL_825709 | Spike | hCoV-19/Canada/Qc-JUS-W004122199/2020 | N | 1108 | Y | 8 (geo) | 20200803 |
| EPI_ISL_862872 | Spike | hCoV-19/Japan/FHU-FP9550-04-1/2020 | N | 1108 | T | 1 | 20200414 |
| EPI_ISL_668446 | Spike | hCoV-19/England/204380344/2020 | N | 1108 | E | 1 | 20201023 |
| EPI_ISL_754048 | Spike | hCoV-19/Germany/SN-ChVir-W1147-4309/2020 | F | 1109 | L | 22 (geo) | 20200406 |
| EPI_ISL_812690 | Spike | hCoV-19/USA/FL-USAFSAM-S395/2020 | F | 1109 | I | 6 (geo) | 20200911 |
| EPI_ISL_478123 | Spike | hCoV-19/Scotland/CVR3795/2020 | Y | 1110 | F | 3 (geo) | 20200531 |
| EPI_ISL_668446 | Spike | hCoV-19/England/204380344/2020 | Y | 1110 | L | 1 | 20201023 |
| EPI_ISL_423784 | Spike | hCoV-19/England/20132054404/2020 | E | 1111 | Q | 68 (geo) | 20200322 |
| EPI_ISL_636245 | Spike | hCoV-19/USA/CA-ALSR-3855/2020 | E | 1111 | A | 12 (geo) | 20200629 |
| EPI_ISL_791976 | Spike | hCoV-19/USA/MA-MGH-01632/2020 | E | 1111 | K | 5 (geo) | 20200428 |
| EPI_ISL_603119 | Spike | hCoV-19/Lithuania/MR-LUHS-Eilnr44/2020 | E | 1111 | D | 2 (geo) | 20200408 |
| EPI_ISL_730569 | Spike | hCoV-19/Turkey/Ankara_GUMV_31394/2020 | E | 1111 | G | 1 | 20200914 |
| EPI_ISL_424456 | Spike | hCoV-19/Iceland/432/2020 | P | 1112 | S | 15 (geo) | 20200320 |
| EPI_ISL_483141 | Spike | hCoV-19/Germany/BE-RKI-Z-0006/2020 | P | 1112 | R | 10 (geo) | 20200420 |
| EPI_ISL_489432 | Spike | hCoV-19/England/CAMB-1AC5E8/2020 | P | 1112 | L | 52 (geo) | 20200423 |
| EPI_ISL_517897 | Spike | hCoV-19/USA/FL-BPHL-1007/2020 | P | 1112 | T | 1 | 20200712 |
| EPI_ISL_776482 | Spike | hCoV-19/Germany/HH-hpi-p2410/2020 | P | 1112 | Q | 3 (geo) | 20200425 |
| EPI_ISL_593489 | Spike | hCoV-19/Canada/ON-E9/2020 | Q | 1113 | L | 2 (geo) | 20200426 |
| EPI_ISL_483141 | Spike | hCoV-19/Germany/BE-RKI-Z-0006/2020 | Q | 1113 | A | 9 (geo) | 20200420 |
| EPI_ISL_675971 | Spike | hCoV-19/England/MILK-B88C01/2020 | Q | 1113 | E | 2 (geo) | 20201114 |
| EPI_ISL_770128 | Spike | hCoV-19/USA/WY-WPHL-20148328/2020 | Q | 1113 | H | 2 (geo) | 20201123 |
| EPI_ISL_674127 | Spike | hCoV-19/England/MILK-B8684B/2020 | Q | 1113 | K | 3 (geo) | 20201113 |
| EPI_ISL_843653 | Spike | hCoV-19/Denmark/DCGC-29606/2020 | Q | 1113 | R | 1 | 20201228 |
| EPI_ISL_475649 | Spike | hCoV-19/USA/CA-CSMC38/2020 | I | 1114 | T | 19 (geo) | 20200403 |
| EPI_ISL_693220 | Spike | hCoV-19/Brazil/SP-596/2020 | I | 1114 | M | 5 (geo) | 20200701 |
| EPI_ISL_441159 | Spike | hCoV-19/England/CAMB-7912D/2020 | I | 1114 | V | 8 (geo) | 20200403 |
| EPI_ISL_770128 | Spike | hCoV-19/USA/WY-WPHL-20148328/2020 | I | 1114 | H | 1 | 20201123 |
| EPI_ISL_603119 | Spike | hCoV-19/Lithuania/MR-LUHS-Eilnr44/2020 | I | 1114 | S | 5 (geo) | 20200408 |
| EPI_ISL_845674 | Spike | hCoV-19/USA/TX-QDX-2883/2020 | I | 1114 | L | 4 (geo) | 20200810 |
| EPI_ISL_816657 | Spike | hCoV-19/England/TFCI-26F9569/2020 | I | 1115 | V | 11 (geo) | 20200000 |
| EPI_ISL_509154 | Spike | hCoV-19/USA/OR-OHSU-1169/2020 | I | 1115 | L | 1 | 20200711 |
| EPI_ISL_770128 | Spike | hCoV-19/USA/WY-WPHL-20148328/2020 | I | 1115 | Y | 1 | 20201123 |
| EPI_ISL_603119 | Spike | hCoV-19/Lithuania/MR-LUHS-Eilnr44/2020 | I | 1115 | F | 2 (geo) | 20200408 |
| EPI_ISL_469557 | Spike | hCoV-19/England/BRIS-127B5C/2020 | T | 1116 | I | 6 (geo) | 20200416 |
| EPI_ISL_512445 | Spike | hCoV-19/Scotland/CVR1649/2020 | T | 1116 | N | 17 (geo) | 20200406 |
| EPI_ISL_770128 | Spike | hCoV-19/USA/WY-WPHL-20148328/2020 | T | 1116 | Y | 1 | 20201123 |
| EPI_ISL_579239 | Spike | hCoV-19/New Zealand/20VR2478/2020 | T | 1117 | I | 355 (geo) | 20200000 |
| EPI_ISL_492750 | Spike | hCoV-19/England/LOND-D8A12/2020 | T | 1117 | P | 1 | 20200415 |
| EPI_ISL_744952 | Spike | hCoV-19/Luxembourg/LNS9623706/2020 | T | 1117 | R | 8 (geo) | 20201023 |
| EPI_ISL_595721 | Spike | hCoV-19/England/QEUH-9F7EEB/2020 | T | 1117 | A | 2 (geo) | 20200927 |
| EPI_ISL_747471 | Spike | hCoV-19/Italy/VEN-IZSVe-20RS2163-1_VR/2020 | T | 1117 | K | 3 (geo) | 20201120 |
| EPI_ISL_499414 | Spike | hCoV-19/Wales/PHWC-1691A7/2020 | T | 1117 | S | 2 (geo) | 20200629 |
| EPI_ISL_766219 | Spike | hCoV-19/England/205261952/2020 | D | 1118 | H | 30508 (geo) | 20200000 |
| EPI_ISL_461518 | Spike | hCoV-19/England/BIRM-5F5B8/2020 | D | 1118 | Y | 154 (geo) | 20200000 |
| EPI_ISL_482688 | Spike | hCoV-19/Singapore/540/2020 | D | 1118 | V | 20 (geo) | 20200602 |
| EPI_ISL_747072 | Spike | hCoV-19/USA/LA-CDC-2-3693761/2020 | D | 1118 | A | 5 (geo) | 20201104 |
| EPI_ISL_770128 | Spike | hCoV-19/USA/WY-WPHL-20148328/2020 | D | 1118 | Q | 2 (geo) | 20201123 |
| EPI_ISL_763293 | Spike | hCoV-19/Netherlands/ZH-EMC-1224/2020 | D | 1118 | G | 4 (geo) | 20200000 |
| EPI_ISL_770128 | Spike | hCoV-19/USA/WY-WPHL-20148328/2020 | N | 1119 | H | 1 | 20201123 |
| EPI_ISL_857690 | Spike | hCoV-19/England/CAMC-FB0871/2021 | N | 1119 | S | 1 | 20210108 |
| EPI_ISL_548752 | Spike | hCoV-19/Canada/ON-PHL-20-00077/2020 | T | 1120 | I | 65 (geo) | 20200000 |
| EPI_ISL_677282 | Spike | hCoV-19/USA/CO-CDPHE-2009050882/2020 | T | 1120 | S | 15 (geo) | 20200903 |
| EPI_ISL_453188 | Spike | hCoV-19/Scotland/EDB5108/2020 | F | 1121 | L | 138 (geo) | 20200331 |
| EPI_ISL_770128 | Spike | hCoV-19/USA/WY-WPHL-20148328/2020 | F | 1121 | C | 1 | 20201123 |
| EPI_ISL_850118 | Spike | hCoV-19/USA/CA-CZB-16100/2020 | F | 1121 | V | 1 | 20201130 |
| EPI_ISL_707954 | Spike | hCoV-19/Germany/SL-SU-10428103/2020 | V | 1122 | L | 482 (geo) | 20200318 |
| EPI_ISL_859925 | Spike | hCoV-19/United Arab Emirates/3990/2020 | V | 1122 | A | 1 | 20201119 |
| EPI_ISL_602971 | Spike | hCoV-19/USA/MN-MDH-1836/2020 | V | 1122 | M | 1 | 20200917 |
| EPI_ISL_770128 | Spike | hCoV-19/USA/WY-WPHL-20148328/2020 | S | 1123 | W | 1 | 20201123 |
| EPI_ISL_788815 | Spike | hCoV-19/USA/TX-HMH-MCoV-13722/2020 | S | 1123 | Y | 1 | 20200818 |
| EPI_ISL_454828 | Spike | hCoV-19/USA/NC_200386/2020 | S | 1123 | P | 1 | 20200300 |
| EPI_ISL_788730 | Spike | hCoV-19/USA/TX-HMH-MCoV-13622/2020 | S | 1123 | F | 1 | 20200820 |
| EPI_ISL_426635 | Spike | hCoV-19/Australia/NT18/2020 | G | 1124 | V | 292 (geo) | 20200000 |
| EPI_ISL_798502 | Spike | hCoV-19/England/ALDP-D3EAA4/2020 | G | 1124 | S | 10 (geo) | 20201227 |
| EPI_ISL_481561 | Spike | hCoV-19/Finland/15A84S16/2020 | G | 1124 | C | 17 (geo) | 20200415 |
| EPI_ISL_785865 | Spike | hCoV-19/USA/TX-HMH-MCoV-16181/2020 | G | 1124 | R | 1 | 20201028 |
| EPI_ISL_676582 | Spike | hCoV-19/Serbia/Novi Sad-210722506/2020 | G | 1124 | A | 1 | 20200624 |
| EPI_ISL_596271 | Spike | hCoV-19/Russia/SVE-RII-MH1412S/2020 | G | 1124 | D | 2 (geo) | 20200907 |
| EPI_ISL_613723 | Spike | hCoV-19/USA/FL-BPHL-1795/2020 | N | 1125 | D | 3 (geo) | 20200731 |
| EPI_ISL_568483 | Spike | hCoV-19/Iran/K1r-4/2020 | N | 1125 | T | 1 | 20200322 |
| EPI_ISL_466352 | Spike | hCoV-19/England/201580039/2020 | D | 1127 | G | 9 (geo) | 20200409 |
| EPI_ISL_767466 | Spike | hCoV-19/USA/NY-Wadsworth-287513-01/2020 | D | 1127 | H | 2 (geo) | 20201214 |
| EPI_ISL_457297 | Spike | hCoV-19/England/LOND-D5ACA/2020 | D | 1127 | Y | 10 (geo) | 20200417 |
| EPI_ISL_660831 | Spike | hCoV-19/USA/IA-GMF-21344/2020 | D | 1127 | E | 3 (geo) | 20200920 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | D | 1127 | K | 3 (geo) | 20200207 |
| EPI_ISL_695545 | Spike | hCoV-19/USA/AZ-TG558317/2020 | D | 1127 | N | 4 (geo) | 20200729 |
| EPI_ISL_541956 | Spike | hCoV-19/Spain/IB-IBV-99007209/2020 | D | 1127 | V | 2 (geo) | 20200528 |
| EPI_ISL_642221 | Spike | hCoV-19/England/QEUH-B127A1/2020 | D | 1127 | A | 1 | 20201102 |
| EPI_ISL_717857 | Spike | hCoV-19/Brazil/RJ-00462/2020 | V | 1128 | I | 6 (geo) | 20200702 |
| EPI_ISL_512570 | Spike | hCoV-19/USA/FL-BPHL-0765/2020 | V | 1128 | A | 3 (geo) | 20200628 |
| EPI_ISL_537711 | Spike | hCoV-19/Spain/CN-IBV-97006502/2020 | V | 1128 | F | 6 (geo) | 20200328 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | V | 1128 | W | 3 (geo) | 20200207 |
| EPI_ISL_446045 | Spike | hCoV-19/Wales/PHWC-2DFD3/2020 | V | 1129 | I | 27 (geo) | 20200410 |
| EPI_ISL_406592 | Spike | hCoV-19/Shenzhen/SZTH-001/2020 | V | 1129 | L | 16 (geo) | 20200113 |
| EPI_ISL_483718 | Spike | hCoV-19/Israel/n14264/2020 | V | 1129 | A | 4 (geo) | 20200312 |
| EPI_ISL_548947 | Spike | hCoV-19/Iran/K1r-3/2020 | V | 1129 | E | 2 (geo) | 20200320 |
| EPI_ISL_538085 | Spike | hCoV-19/Spain/NC-IBV-98005385/2020 | I | 1130 | M | 23 (geo) | 20200323 |
| EPI_ISL_685746 | Spike | hCoV-19/Japan/PG-2141/2020 | I | 1130 | T | 2 (geo) | 20200400 |
| EPI_ISL_452348 | Spike | hCoV-19/Beijing/DT-travelHU02/2020 | I | 1130 | L | 10 (geo) | 20200318 |
| EPI_ISL_751707 | Spike | hCoV-19/USA/KS-CDC-2-3714085/2020 | I | 1130 | V | 3 (geo) | 20201103 |
| EPI_ISL_664445 | Spike | hCoV-19/England/LIVE-DBD3FD/2020 | G | 1131 | A | 3 (geo) | 20201027 |
| EPI_ISL_459162 | Spike | hCoV-19/Scotland/GCVR-172DB6/2020 | G | 1131 | R | 1 | 20200406 |
| EPI_ISL_538801 | Spike | hCoV-19/England/LEED-2AA0E8/2020 | G | 1131 | V | 1 | 20200408 |
| EPI_ISL_647634 | Spike | hCoV-19/England/ALDP-B1A509/2020 | G | 1131 | E | 2 (geo) | 20201031 |
| EPI_ISL_554926 | Spike | hCoV-19/England/ALDP-95C42E/2020 | I | 1132 | T | 9 (geo) | 20200620 |
| EPI_ISL_414628 | Spike | hCoV-19/France/HDF-1805/2020 | I | 1132 | V | 45 (geo) | 20200302 |
| EPI_ISL_626332 | Spike | hCoV-19/Belgium/ULG-10563/2020 | I | 1132 | F | 1 | 20201023 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | I | 1132 | L | 3 (geo) | 20200207 |
| EPI_ISL_815365 | Spike | hCoV-19/Germany/HE-Cento-32491508/2020 | I | 1132 | S | 2 (geo) | 20200812 |
| EPI_ISL_640965 | Spike | hCoV-19/Australia/VIC15900/2020 | V | 1133 | F | 51 (geo) | 20200000 |
| EPI_ISL_699682 | Spike | hCoV-19/India/MH-ACTREC-026/2020 | V | 1133 | I | 10 (geo) | 20200504 |
| EPI_ISL_633063 | Spike | hCoV-19/USA/NY-NYCPHL-001053/2020 | V | 1133 | A | 20 (geo) | 20201013 |
| EPI_ISL_751382 | Spike | hCoV-19/Italy/VEN-UniVR-73/2020 | V | 1133 | L | 12 (geo) | 20200319 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | V | 1133 | M | 3 (geo) | 20200207 |
| EPI_ISL_515693 | Spike | hCoV-19/South Africa/KRISP-K002317/2020 | N | 1134 | H | 2 (geo) | 20200722 |
| EPI_ISL_788102 | Spike | hCoV-19/USA/TX-HMH-MCoV-12950/2020 | N | 1134 | K | 1 | 20200818 |
| EPI_ISL_848555 | Spike | hCoV-19/Brazil/PA-IEC176486/2020 | N | 1134 | S | 2 (geo) | 20201015 |
| EPI_ISL_418879 | Spike | hCoV-19/USA/WA-UW312/2020 | N | 1135 | I | 3 (geo) | 20200314 |
| EPI_ISL_440467 | Spike | hCoV-19/England/CAMB-757C5/2020 | N | 1135 | Y | 2 (geo) | 20200311 |
| EPI_ISL_740234 | Spike | hCoV-19/Luxembourg/LNS3019031/2020 | N | 1135 | D | 2 (geo) | 20201110 |
| EPI_ISL_466415 | Spike | hCoV-19/England/20162037504/2020 | T | 1136 | I | 5 (geo) | 20200409 |
| EPI_ISL_848960 | Spike | hCoV-19/USA/FL-BPHL-2348/2020 | T | 1136 | K | 1 | 20201006 |
| EPI_ISL_486007 | Spike | hCoV-19/USA/WA-UW-2611/2020 | V | 1137 | G | 1 | 20200329 |
| EPI_ISL_738215 | Spike | hCoV-19/Belgium/rega-0508674/2020 | V | 1137 | F | 2 (geo) | 20200508 |
| EPI_ISL_707983 | Spike | hCoV-19/Germany/SL-SU-10450682/2020 | V | 1137 | I | 1 | 20201013 |
| EPI_ISL_480577 | Spike | hCoV-19/Australia/VIC1074/2020 | Y | 1138 | L | 2 (geo) | 20200406 |
| EPI_ISL_775841 | Spike | hCoV-19/Germany/HH-hpi-p2319/2020 | Y | 1138 | F | 1 | 20200322 |
| EPI_ISL_693203 | Spike | hCoV-19/Brazil/SP-575/2020 | Y | 1138 | N | 1 | 20200421 |
| EPI_ISL_833209 | Spike | hCoV-19/Finland/HEL4-15/2021 | Y | 1138 | D | 1 | 20210103 |
| EPI_ISL_511625 | Spike | hCoV-19/Portugal/PT1078/2020 | D | 1139 | H | 52 (geo) | 20200328 |
| EPI_ISL_515177 | Spike | hCoV-19/South Africa/LR00056/2020 | D | 1139 | N | 28 (geo) | 20200710 |
| EPI_ISL_429993 | Spike | hCoV-19/Jordan/SR-033/2020 | D | 1139 | Y | 13 (geo) | 20200316 |
| EPI_ISL_648450 | Spike | hCoV-19/USA/CA-CZB-12795/2020 | D | 1139 | E | 1 | 20201014 |
| EPI_ISL_480589 | Spike | hCoV-19/Australia/VIC1298/2020 | P | 1140 | L | 2 (geo) | 20200409 |
| EPI_ISL_649063 | Spike | hCoV-19/Israel/CVL-n3638/2020 | P | 1140 | S | 1 | 20200310 |
| EPI_ISL_486005 | Spike | hCoV-19/USA/WA-UW-2608/2020 | L | 1141 | F | 19 (geo) | 20200329 |
| EPI_ISL_497878 | Spike | hCoV-19/India/MH-NCCS-NR1333/2020 | L | 1141 | I | 1 | 20200516 |
| EPI_ISL_856703 | Spike | hCoV-19/England/210141392/2021 | L | 1141 | Q | 1 | 20210106 |
| EPI_ISL_775246 | Spike | hCoV-19/Italy/CAM-INTPas-18/2020 | L | 1141 | C | 1 | 20200319 |
| EPI_ISL_497878 | Spike | hCoV-19/India/MH-NCCS-NR1333/2020 | Q | 1142 | L | 6 (geo) | 20200516 |
| EPI_ISL_483141 | Spike | hCoV-19/Germany/BE-RKI-Z-0006/2020 | Q | 1142 | C | 9 (geo) | 20200420 |
| EPI_ISL_545077 | Spike | hCoV-19/USA/TX-HMH-2035/2020 | Q | 1142 | K | 1 | 20200509 |
| EPI_ISL_407896 | Spike | hCoV-19/Australia/QLD02/2020 | P | 1143 | L | 26 (geo) | 20200130 |
| EPI_ISL_475078 | Spike | hCoV-19/Belgium/UGent-118/2020 | P | 1143 | S | 2 (geo) | 20200323 |
| EPI_ISL_497878 | Spike | hCoV-19/India/MH-NCCS-NR1333/2020 | P | 1143 | V | 2 (geo) | 20200516 |
| EPI_ISL_785873 | Spike | hCoV-19/USA/TX-HMH-MCoV-16189/2020 | P | 1143 | H | 1 | 20201029 |
| EPI_ISL_417319 | Spike | hCoV-19/USA/CA-SCCPHD-UC15/2020 | P | 1143 | T | 1 | 20200305 |
| EPI_ISL_784409 | Spike | hCoV-19/USA/TX-HMH-MCoV-18061/2020 | P | 1143 | F | 1 | 20201113 |
| EPI_ISL_592578 | Spike | hCoV-19/Australia/VIC15712/2020 | E | 1144 | Q | 146 (geo) | 20200000 |
| EPI_ISL_453573 | Spike | hCoV-19/England/NORW-E900D/2020 | E | 1144 | K | 2 (geo) | 20200425 |
| EPI_ISL_483141 | Spike | hCoV-19/Germany/BE-RKI-Z-0006/2020 | E | 1144 | S | 9 (geo) | 20200420 |
| EPI_ISL_806646 | Spike | hCoV-19/Kenya/C14421/2020 | E | 1144 | V | 1 | 20200604 |
| EPI_ISL_447931 | Spike | hCoV-19/England/BIRM-5EBB7/2020 | E | 1144 | A | 7 (geo) | 20200428 |
| EPI_ISL_856703 | Spike | hCoV-19/England/210141392/2021 | E | 1144 | H | 1 | 20210106 |
| EPI_ISL_853334 | Spike | hCoV-19/USA/PA-MGEL-01092/2020 | E | 1144 | D | 1 | 20201130 |
| EPI_ISL_860344 | Spike | hCoV-19/Germany/NW-KRO-027/2020 | L | 1145 | C | 1 | 20200616 |
| EPI_ISL_497878 | Spike | hCoV-19/India/MH-NCCS-NR1333/2020 | L | 1145 | F | 1 | 20200516 |
| EPI_ISL_608204 | Spike | hCoV-19/England/ALDP-A6C554/2020 | D | 1146 | G | 13 (geo) | 20201015 |
| EPI_ISL_605106 | Spike | hCoV-19/Ireland/D-NVRL-20G35380/2020 | D | 1146 | H | 99 (geo) | 20200320 |
| EPI_ISL_860344 | Spike | hCoV-19/Germany/NW-KRO-027/2020 | D | 1146 | T | 1 | 20200616 |
| EPI_ISL_483141 | Spike | hCoV-19/Germany/BE-RKI-Z-0006/2020 | D | 1146 | S | 9 (geo) | 20200420 |
| EPI_ISL_579274 | Spike | hCoV-19/New Zealand/20VR2529/2020 | D | 1146 | Y | 61 (geo) | 20200000 |
| EPI_ISL_413791 | Spike | hCoV-19/Weifang/WF0028/2020 | D | 1146 | E | 13 (geo) | 20200200 |
| EPI_ISL_448604 | Spike | hCoV-19/England/OXON-AD937/2020 | D | 1146 | N | 9 (geo) | 20200000 |
| EPI_ISL_497878 | Spike | hCoV-19/India/MH-NCCS-NR1333/2020 | D | 1146 | Q | 1 | 20200516 |
| EPI_ISL_632257 | Spike | hCoV-19/Bahrain/340861272_S28/2020 | D | 1146 | V | 1 | 20201014 |
| EPI_ISL_456506 | Spike | hCoV-19/Australia/VIC1586/2020 | S | 1147 | L | 160 (geo) | 20200000 |
| EPI_ISL_636567 | Spike | hCoV-19/Netherlands/NH-RIVM-10357/2020 | S | 1147 | T | 1 | 20200730 |
| EPI_ISL_497878 | Spike | hCoV-19/India/MH-NCCS-NR1333/2020 | S | 1147 | V | 1 | 20200516 |
| EPI_ISL_806946 | Spike | hCoV-19/USA/WA-S3016/2020 | S | 1147 | A | 3 (geo) | 20200815 |
| EPI_ISL_856703 | Spike | hCoV-19/England/210141392/2021 | S | 1147 | N | 1 | 20210106 |
| EPI_ISL_788094 | Spike | hCoV-19/USA/TX-HMH-MCoV-12942/2020 | F | 1148 | S | 1 | 20200818 |
| EPI_ISL_785056 | Spike | hCoV-19/USA/TX-HMH-MCoV-18708/2020 | F | 1148 | L | 1 | 20201121 |
| EPI_ISL_474352 | Spike | hCoV-19/Wales/PHWC-327F1/2020 | K | 1149 | R | 15 (geo) | 20200415 |
| EPI_ISL_466772 | Spike | hCoV-19/Canada/BC_04930828/2020 | K | 1149 | N | 2 (geo) | 20200400 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | K | 1149 | V | 3 (geo) | 20200207 |
| EPI_ISL_423755 | Spike | hCoV-19/England/20132024104/2020 | K | 1149 | M | 1 | 20200323 |
| EPI_ISL_443897 | Spike | hCoV-19/England/BRIS-124D0E/2020 | E | 1150 | D | 34 (geo) | 20200326 |
| EPI_ISL_860344 | Spike | hCoV-19/Germany/NW-KRO-027/2020 | E | 1150 | H | 1 | 20200616 |
| EPI_ISL_441909 | Spike | hCoV-19/England/SHEF-C1663/2020 | E | 1150 | K | 12 (geo) | 20200410 |
| EPI_ISL_603601 | Spike | hCoV-19/Switzerland/SZ-ETHZ-321351/2020 | E | 1150 | V | 2 (geo) | 20201013 |
| EPI_ISL_712075 | Spike | hCoV-19/South Africa/N00342/2020 | E | 1150 | Q | 1 | 20201105 |
| EPI_ISL_734745 | Spike | hCoV-19/Belgium/rega-0528690/2020 | E | 1150 | G | 1 | 20200528 |
| EPI_ISL_438317 | Spike | hCoV-19/England/CAMB-76B13/2020 | E | 1150 | L | 2 (geo) | 20200330 |
| EPI_ISL_460561 | Spike | hCoV-19/USA/MI-MDHHS-SC20513/2020 | E | 1151 | D | 6 (geo) | 20200429 |
| EPI_ISL_541375 | Spike | hCoV-19/Brazil/SE-6535/2020 | L | 1152 | F | 2 (geo) | 20200312 |
| EPI_ISL_464547 | Spike | hCoV-19/England/201090235/2020 | D | 1153 | Y | 126 (geo) | 20200304 |
| EPI_ISL_802098 | Spike | hCoV-19/USA/NY-MSHSPSP-PV14708/2020 | D | 1153 | G | 12 (geo) | 20200527 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | D | 1153 | H | 7 (geo) | 20200207 |
| EPI_ISL_451555 | Spike | hCoV-19/Australia/NSW291/2020 | D | 1153 | A | 3 (geo) | 20200403 |
| EPI_ISL_550063 | Spike | hCoV-19/England/MILK-9A8BB5/2020 | D | 1153 | V | 1 | 20200901 |
| EPI_ISL_568499 | Spike | hCoV-19/Iran/K1r-65/2020 | D | 1153 | E | 1 | 20200425 |
| EPI_ISL_552021 | Spike | hCoV-19/England/MILK-992662/2020 | D | 1153 | N | 1 | 20200827 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | K | 1154 | R | 5 (geo) | 20200207 |
| EPI_ISL_651794 | Spike | hCoV-19/Scotland/CVR5391/2020 | K | 1154 | I | 2 (geo) | 20200922 |
| EPI_ISL_730025 | Spike | hCoV-19/Nigeria/FC-CV362/2020 | Y | 1155 | F | 49 (geo) | 20200707 |
| EPI_ISL_603112 | Spike | hCoV-19/Lithuania/KU-LUHS-Eilnr102/2020 | Y | 1155 | H | 7 (geo) | 20200420 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | Y | 1155 | M | 4 (geo) | 20200207 |
| EPI_ISL_443768 | Spike | hCoV-19/England/BRIS-124F08/2020 | F | 1156 | L | 15 (geo) | 20200326 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | F | 1156 | Y | 3 (geo) | 20200408 |
| EPI_ISL_475525 | Spike | hCoV-19/Sweden/20-19194/2020 | K | 1157 | N | 10 (geo) | 20200528 |
| EPI_ISL_434739 | Spike | hCoV-19/USA/TX-HMH030/2020 | K | 1157 | M | 3 (geo) | 20200313 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | K | 1157 | Q | 3 (geo) | 20200408 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | K | 1157 | S | 4 (geo) | 20200207 |
| EPI_ISL_492967 | Spike | hCoV-19/England/NORT-28C073/2020 | K | 1157 | T | 1 | 20200511 |
| EPI_ISL_779845 | Spike | hCoV-19/France/PAC-NRC2908/2020 | K | 1157 | R | 1 | 20201207 |
| EPI_ISL_617786 | Spike | hCoV-19/Denmark/DCGC-2514/2020 | N | 1158 | H | 2 (geo) | 20200810 |
| EPI_ISL_722178 | Spike | hCoV-19/India/MH-NCCS-NR-8740/2020 | N | 1158 | A | 2 (geo) | 20200701 |
| EPI_ISL_468741 | Spike | hCoV-19/Belgium/UGent-93/2020 | N | 1158 | S | 4 (geo) | 20200313 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | N | 1158 | I | 3 (geo) | 20200408 |
| EPI_ISL_454310 | Spike | hCoV-19/Portugal/PT0587/2020 | N | 1158 | Y | 1 | 20200327 |
| EPI_ISL_463900 | Spike | hCoV-19/Shaoxing/08/2020 | N | 1158 | M | 4 (geo) | 20200207 |
| EPI_ISL_458979 | Spike | hCoV-19/England/BRIS-12663E/2020 | H | 1159 | Y | 65 (geo) | 20200408 |
| EPI_ISL_637187 | Spike | hCoV-19/England/204591850/2020 | H | 1159 | R | 22 (geo) | 20200000 |
| EPI_ISL_779712 | Spike | hCoV-19/Italy/LOM-UniMI08/2020 | H | 1159 | L | 10 (geo) | 20200224 |
| EPI_ISL_641322 | Spike | hCoV-19/India/DL-IGIB-1130004/2020 | H | 1159 | N | 1 | 20200500 |
| EPI_ISL_440514 | Spike | hCoV-19/England/CAMB-84778/2020 | T | 1160 | I | 11 (geo) | 20200228 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | T | 1160 | Q | 3 (geo) | 20200408 |
| EPI_ISL_455371 | Spike | hCoV-19/Wuhan/HB-WH2-147/2020 | T | 1160 | K | 1 | 20200302 |
| EPI_ISL_430145 | Spike | hCoV-19/USA/WA-S291/2020 | S | 1161 | A | 1 | 20200311 |
| EPI_ISL_454908 | Spike | hCoV-19/Wuhan/HB-WH1-127/2020 | S | 1161 | P | 1 | 20200302 |
| EPI_ISL_788730 | Spike | hCoV-19/USA/TX-HMH-MCoV-13622/2020 | S | 1161 | L | 1 | 20200820 |
| EPI_ISL_819427 | Spike | hCoV-19/England/NORW-22408C/2020 | P | 1162 | S | 363 (geo) | 20200000 |
| EPI_ISL_815365 | Spike | hCoV-19/Germany/HE-Cento-32491508/2020 | P | 1162 | R | 270 (geo) | 20200812 |
| EPI_ISL_448987 | Spike | hCoV-19/England/NORW-E6EAC/2020 | P | 1162 | L | 200 (geo) | 20200000 |
| EPI_ISL_414634 | Spike | hCoV-19/France/HDF-1986/2020 | P | 1162 | A | 5 (geo) | 20200304 |
| EPI_ISL_483284 | Spike | hCoV-19/USA/CA-ALSR-0659-IPL/2020 | P | 1162 | Q | 4 (geo) | 20200429 |
| EPI_ISL_457455 | Spike | hCoV-19/England/NORW-EB900/2020 | P | 1162 | T | 3 (geo) | 20200508 |
| EPI_ISL_660552 | Spike | hCoV-19/England/204742197/2020 | D | 1163 | Y | 2291 (geo) | 20200000 |
| EPI_ISL_543431 | Spike | hCoV-19/USA/TX-HMH-4200/2020 | D | 1163 | V | 21 (geo) | 20200619 |
| EPI_ISL_756464 | Spike | hCoV-19/England/ALDP-C88D94/2020 | D | 1163 | N | 2 (geo) | 20201216 |
| EPI_ISL_699832 | Spike | hCoV-19/India/MH-ACTREC-177/2020 | D | 1163 | H | 3 (geo) | 20200615 |
| EPI_ISL_786713 | Spike | hCoV-19/USA/TX-HMH-MCoV-15229/2020 | D | 1163 | A | 9 (geo) | 20201019 |
| EPI_ISL_419777 | Spike | hCoV-19/Australia/VIC56/2020 | D | 1163 | G | 4 (geo) | 20200312 |
| EPI_ISL_446637 | Spike | hCoV-19/Wales/PHWC-32357/2020 | V | 1164 | F | 50 (geo) | 20200408 |
| EPI_ISL_470348 | Spike | hCoV-19/England/CAMB-1AB570/2020 | V | 1164 | I | 32 (geo) | 20200421 |
| EPI_ISL_684033 | Spike | hCoV-19/Bahrain/341033460/2020 | V | 1164 | A | 2 (geo) | 20201115 |
| EPI_ISL_632847 | Spike | hCoV-19/USA/ID-UNM-IBL032/2020 | D | 1165 | Y | 33 (geo) | 20200315 |
| EPI_ISL_417275 | Spike | hCoV-19/England/20109052306/2020 | D | 1165 | G | 12 (geo) | 20200306 |
| EPI_ISL_658844 | Spike | hCoV-19/England/MILK-B39346/2020 | D | 1165 | A | 4 (geo) | 20201101 |
| EPI_ISL_446766 | Spike | hCoV-19/Wales/PHWC-33918/2020 | D | 1165 | N | 4 (geo) | 20200416 |
| EPI_ISL_568483 | Spike | hCoV-19/Iran/K1r-4/2020 | D | 1165 | V | 1 | 20200322 |
| EPI_ISL_568483 | Spike | hCoV-19/Iran/K1r-4/2020 | L | 1166 | F | 5 (geo) | 20200322 |
| EPI_ISL_527438 | Spike | hCoV-19/USA/CO-CSU-D1085-3/2020 | L | 1166 | V | 3 (geo) | 20200415 |
| EPI_ISL_660552 | Spike | hCoV-19/England/204742197/2020 | G | 1167 | V | 2067 (geo) | 20200000 |
| EPI_ISL_585653 | Spike | hCoV-19/Wales/PHWC-16DFF4/2020 | G | 1167 | F | 49 (geo) | 20200903 |
| EPI_ISL_729901 | Spike | hCoV-19/Peru/LIM-UPCH-0243/2020 | G | 1167 | A | 33 (geo) | 20201014 |
| EPI_ISL_525111 | Spike | hCoV-19/USA/UT-UPHL-2009111/2020 | G | 1167 | D | 17 (geo) | 20200511 |
| EPI_ISL_525280 | Spike | hCoV-19/USA/UT-UPHL-2008953/2020 | G | 1167 | R | 2 (geo) | 20200513 |
| EPI_ISL_568483 | Spike | hCoV-19/Iran/K1r-4/2020 | G | 1167 | C | 1 | 20200322 |
| EPI_ISL_429998 | Spike | hCoV-19/Jordan/SR-039/2020 | G | 1167 | S | 3 (geo) | 20200328 |
| EPI_ISL_437230 | Spike | hCoV-19/Germany/BY-MVP-0031/2020 | D | 1168 | G | 182 (geo) | 20200322 |
| EPI_ISL_556272 | Spike | hCoV-19/England/ALDP-6CF5F9/2020 | D | 1168 | Y | 5 (geo) | 20200702 |
| EPI_ISL_418907 | Spike | hCoV-19/USA/WA-UW340/2020 | D | 1168 | H | 2 (geo) | 20200316 |
| EPI_ISL_443876 | Spike | hCoV-19/England/BRIS-1258FD/2020 | D | 1168 | A | 2 (geo) | 20200330 |
| EPI_ISL_487836 | Spike | hCoV-19/Scotland/EDB6396/2020 | D | 1168 | V | 1 | 20200415 |
| EPI_ISL_412386 | Spike | hCoV-19/Beijing/ICDC-DT005/2020 | D | 1168 | N | 1 | 20200205 |
| EPI_ISL_849285 | Spike | hCoV-19/Argentina/INEI023720/2020 | I | 1169 | F | 8 (geo) | 20200629 |
| EPI_ISL_548803 | Spike | hCoV-19/Canada/ON-PHL-20-01181/2020 | I | 1169 | L | 10 (geo) | 20200600 |
| EPI_ISL_417850 | Spike | hCoV-19/Iceland/52/2020 | I | 1169 | V | 5 (geo) | 20200305 |
| EPI_ISL_481096 | Spike | hCoV-19/Spain/MD-IBV-004905/2020 | I | 1169 | T | 2 (geo) | 20200310 |
| EPI_ISL_564931 | Spike | hCoV-19/Australia/VIC8304/2020 | S | 1170 | F | 7 (geo) | 20200819 |
| EPI_ISL_408487 | Spike | hCoV-19/Henan/IVDC-HeN-002/2020 | S | 1170 | Y | 1 | 20200120 |
| EPI_ISL_417750 | Spike | hCoV-19/Iceland/202/2020 | S | 1170 | P | 2 (geo) | 20200316 |
| EPI_ISL_457527 | Spike | hCoV-19/England/NORW-EC4A4/2020 | S | 1170 | T | 1 | 20200517 |
| EPI_ISL_454112 | Spike | hCoV-19/Portugal/PT0393/2020 | G | 1171 | S | 16 (geo) | 20200414 |
| EPI_ISL_667639 | Spike | hCoV-19/Japan/IC-0210/2020 | G | 1171 | D | 18 (geo) | 20200600 |
| EPI_ISL_454924 | Spike | hCoV-19/Wuhan/HB-WH2-156/2020 | G | 1171 | V | 25 (geo) | 20200228 |
| EPI_ISL_755501 | Spike | hCoV-19/USA/ME-HETL-J0387/2020 | G | 1171 | K | 2 (geo) | 20201215 |
| EPI_ISL_525904 | Spike | hCoV-19/USA/OR-OHSU-0807/2020 | I | 1172 | V | 20 (geo) | 20200622 |
| EPI_ISL_755501 | Spike | hCoV-19/USA/ME-HETL-J0387/2020 | I | 1172 | F | 2 (geo) | 20201215 |
| EPI_ISL_832223 | Spike | hCoV-19/Belgium/ULG-11249/2021 | I | 1172 | S | 1 | 20210107 |
| EPI_ISL_570861 | Spike | hCoV-19/USA/WA-UW-21728/2020 | N | 1173 | S | 5 (geo) | 20200806 |
| EPI_ISL_619188 | Spike | hCoV-19/Denmark/DCGC-7187/2020 | N | 1173 | D | 13 (geo) | 20201012 |
| EPI_ISL_463985 | Spike | hCoV-19/Canada/ON_MU-S401/2020 | N | 1173 | K | 1 | 20200330 |
| EPI_ISL_457938 | Spike | hCoV-19/Oman/RESP-20-1976/2020 | A | 1174 | V | 164 (geo) | 20200315 |
| EPI_ISL_500465 | Spike | hCoV-19/Brazil/PE-IAM158/2020 | A | 1174 | S | 9 (geo) | 20200409 |
| EPI_ISL_783548 | Spike | hCoV-19/USA/TX-HMH-MCoV-19747/2020 | A | 1174 | P | 1 | 20201128 |
| EPI_ISL_463985 | Spike | hCoV-19/Canada/ON_MU-S401/2020 | A | 1174 | L | 1 | 20200330 |
| EPI_ISL_458201 | Spike | hCoV-19/Belgium/Rega-0329231/2020 | A | 1174 | T | 1 | 20200329 |
| EPI_ISL_663122 | Spike | hCoV-19/England/QEUH-AF512F/2020 | S | 1175 | P | 1 | 20201030 |
| EPI_ISL_465964 | Spike | hCoV-19/England/201421353/2020 | S | 1175 | L | 4 (geo) | 20200330 |
| EPI_ISL_584645 | Spike | hCoV-19/England/LOND-124DC68/2020 | V | 1176 | F | 1525 (geo) | 20200000 |
| EPI_ISL_746482 | Spike | hCoV-19/Chile/RM-82489/2020 | V | 1176 | G | 3 (geo) | 20200529 |
| EPI_ISL_529207 | Spike | hCoV-19/USA/UT-UPHL-01905/2020 | V | 1176 | L | 2 (geo) | 20200413 |
| EPI_ISL_792457 | Spike | hCoV-19/Argentina/PAIS-D0015/2020 | V | 1176 | A | 2 (geo) | 20200430 |
| EPI_ISL_482461 | Spike | hCoV-19/USA/OR-PROV-226/2020 | V | 1177 | L | 20 (geo) | 20200407 |
| EPI_ISL_570711 | Spike | hCoV-19/USA/WA-UW-22756/2020 | V | 1177 | I | 2 (geo) | 20200806 |
| EPI_ISL_408483 | Spike | hCoV-19/Shanghai/IVDC-SH-001/2020 | V | 1177 | A | 1 | 20200120 |
| EPI_ISL_417357 | Spike | hCoV-19/USA/WA-UW208/2020 | N | 1178 | D | 10 (geo) | 20200313 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | N | 1178 | H | 1 | 20200521 |
| EPI_ISL_811468 | Spike | hCoV-19/England/CAMC-E521C2/2021 | N | 1178 | S | 1 | 20210102 |
| EPI_ISL_667822 | Spike | hCoV-19/England/QEUH-B80E21/2020 | N | 1178 | K | 1 | 20201114 |
| EPI_ISL_446119 | Spike | hCoV-19/Wales/PHWC-2EB65/2020 | N | 1178 | Y | 1 | 20200406 |
| EPI_ISL_454528 | Spike | hCoV-19/India/MH-NIV-3472/2020 | I | 1179 | N | 3 (geo) | 20200317 |
| EPI_ISL_464271 | Spike | hCoV-19/England/20102003204/2020 | I | 1179 | T | 1 | 20200303 |
| EPI_ISL_486836 | Spike | hCoV-19/India/KA-InStem-NCBS-0087/2020 | I | 1179 | V | 5 (geo) | 20200000 |
| EPI_ISL_785423 | Spike | hCoV-19/USA/TX-HMH-MCoV-15739/2020 | I | 1179 | F | 1 | 20200709 |
| EPI_ISL_466187 | Spike | hCoV-19/England/20149035404/2020 | I | 1179 | C | 1 | 20200403 |
| EPI_ISL_536698 | Spike | hCoV-19/USA/WI-UW-1327/2020 | Q | 1180 | K | 8 (geo) | 20200827 |
| EPI_ISL_450162 | Spike | hCoV-19/USA/NY-PV09490/2020 | Q | 1180 | H | 2 (geo) | 20200320 |
| EPI_ISL_568487 | Spike | hCoV-19/Iran/K1r-15/2020 | Q | 1180 | L | 4 (geo) | 20200320 |
| EPI_ISL_547261 | Spike | hCoV-19/USA/TX-HMH-6128/2020 | Q | 1180 | R | 2 (geo) | 20200623 |
| EPI_ISL_437440 | Spike | hCoV-19/India/GJ-GBRC12/2020 | K | 1181 | R | 27 (geo) | 20200426 |
| EPI_ISL_610157 | Spike | hCoV-19/USA/MO-WUSTL_C/2020 | K | 1181 | I | 4 (geo) | 20200814 |
| EPI_ISL_596380 | Spike | hCoV-19/Iran/K1r-73/2020 | K | 1181 | Q | 7 (geo) | 20200400 |
| EPI_ISL_621629 | Spike | hCoV-19/Denmark/DCGC-5091/2020 | K | 1181 | E | 3 (geo) | 20200921 |
| EPI_ISL_515756 | Spike | hCoV-19/South Africa/KRISP-K002391/2020 | K | 1181 | N | 1 | 20200721 |
| EPI_ISL_429882 | Spike | hCoV-19/Taiwan/299/2020 | E | 1182 | Q | 30 (geo) | 20200329 |
| EPI_ISL_480049 | Spike | hCoV-19/Japan/PG-0379/2020 | E | 1182 | K | 3 (geo) | 20200226 |
| EPI_ISL_843348 | Spike | hCoV-19/Denmark/DCGC-29301/2021 | E | 1182 | N | 1 | 20210104 |
| EPI_ISL_696461 | Spike | hCoV-19/South Africa/NHLS-UCT-GS-1912-KRISP/2020 | E | 1182 | D | 2 (geo) | 20201119 |
| EPI_ISL_577653 | Spike | hCoV-19/India/MH-NIV-220751/2020 | I | 1183 | L | 2 (geo) | 20200921 |
| EPI_ISL_789524 | Spike | hCoV-19/USA/TX-HMH-MCoV-10534/2020 | I | 1183 | V | 7 (geo) | 20200708 |
| EPI_ISL_570204 | Spike | hCoV-19/USA/WA-UW-834/2020 | D | 1184 | Y | 12 (geo) | 20200313 |
| EPI_ISL_722016 | Spike | hCoV-19/Brazil/SP-L36-CD921/2020 | D | 1184 | G | 3 (geo) | 20200428 |
| EPI_ISL_677661 | Spike | hCoV-19/USA/WI-UW-2044/2020 | D | 1184 | T | 1 | 20201007 |
| EPI_ISL_569666 | Spike | hCoV-19/USA/CA-LAC-USC3/2020-04-14 | D | 1184 | N | 4 (geo) | 20200414 |
| EPI_ISL_500918 | Spike | hCoV-19/Switzerland/AG-ETHZ-190057/2020 | D | 1184 | A | 1 | 20200709 |
| EPI_ISL_422944 | Spike | hCoV-19/Netherlands/ZuidHolland_76/2020 | R | 1185 | H | 18 (geo) | 20200326 |
| EPI_ISL_631981 | Spike | hCoV-19/USA/NY-NYCPHL-000520/2020 | R | 1185 | C | 17 (geo) | 20200316 |
| EPI_ISL_698986 | Spike | hCoV-19/United Arab Emirates/0847/2020 | R | 1185 | S | 5 (geo) | 20200519 |
| EPI_ISL_454752 | Spike | hCoV-19/Netherlands/NoordBrabant_10003/2020 | R | 1185 | L | 1 | 20200228 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | L | 1186 | R | 1 | 20200000 |
| EPI_ISL_487217 | Spike | hCoV-19/USA/UT-02569/2020 | N | 1187 | Y | 151 (geo) | 20200425 |
| EPI_ISL_697791 | Spike | hCoV-19/Ecuador/USFQ-381/2020 | N | 1187 | S | 6 (geo) | 20200918 |
| EPI_ISL_668060 | Spike | hCoV-19/England/QEUH-B7E4CA/2020 | N | 1187 | I | 5 (geo) | 20201114 |
| EPI_ISL_541893 | Spike | hCoV-19/Spain/MD-IBV-99007119/2020 | N | 1187 | G | 1 | 20200728 |
| EPI_ISL_526840 | Spike | hCoV-19/USA/VA-DCLS-0664/2020 | N | 1187 | D | 2 (geo) | 20200411 |
| EPI_ISL_677661 | Spike | hCoV-19/USA/WI-UW-2044/2020 | N | 1187 | P | 1 | 20201007 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | N | 1187 | V | 1 | 20200521 |
| EPI_ISL_739740 | Spike | hCoV-19/Luxembourg/LNS0224816/2020 | N | 1187 | T | 3 (geo) | 20201121 |
| EPI_ISL_646502 | Spike | hCoV-19/England/ALDP-B26212/2020 | N | 1187 | H | 1 | 20201104 |
| EPI_ISL_483824 | Spike | hCoV-19/India/GJ-GBRC243/2020 | N | 1187 | K | 1 | 20200614 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | E | 1188 | D | 7 (geo) | 20200521 |
| EPI_ISL_649035 | Spike | hCoV-19/USA/CA-ALSR-4449/2020 | E | 1188 | K | 5 (geo) | 20200925 |
| EPI_ISL_677661 | Spike | hCoV-19/USA/WI-UW-2044/2020 | E | 1188 | R | 1 | 20201007 |
| EPI_ISL_433973 | Spike | hCoV-19/England/CAMB-7B54D/2020 | E | 1188 | A | 8 (geo) | 20200000 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | E | 1188 | Q | 3 (geo) | 20200408 |
| EPI_ISL_610209 | Spike | hCoV-19/Hong Kong/HKPU-2514/2020 | E | 1188 | G | 2 (geo) | 20200726 |
| EPI_ISL_613959 | Spike | hCoV-19/Gibraltar/204421223/2020 | E | 1188 | S | 1 | 20201027 |
| EPI_ISL_584861 | Spike | hCoV-19/England/QEUH-9E3662/2020 | E | 1188 | V | 1 | 20200924 |
| EPI_ISL_445613 | Spike | hCoV-19/Wales/PHWC-2A738/2020 | V | 1189 | I | 24 (geo) | 20200405 |
| EPI_ISL_442836 | Spike | hCoV-19/England/CAMB-7F0B1/2020 | V | 1189 | F | 5 (geo) | 20200408 |
| EPI_ISL_746826 | Spike | hCoV-19/Italy/LAZ-INMI-119/2020 | V | 1189 | G | 1 | 20201215 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | V | 1189 | A | 6 (geo) | 20200408 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | V | 1189 | P | 1 | 20200521 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | A | 1190 | R | 3 (geo) | 20200408 |
| EPI_ISL_466024 | Spike | hCoV-19/England/20146008404/2020 | A | 1190 | S | 2 (geo) | 20200331 |
| EPI_ISL_613959 | Spike | hCoV-19/Gibraltar/204421223/2020 | A | 1190 | E | 1 | 20201027 |
| EPI_ISL_472298 | Spike | hCoV-19/England/NORW-EB0CF/2020 | A | 1190 | T | 1 | 20200504 |
| EPI_ISL_623390 | Spike | hCoV-19/England/CAMC-AAFB26/2020 | A | 1190 | V | 1 | 20201023 |
| EPI_ISL_494756 | Spike | hCoV-19/Italy/CAM-INTPas-4/2020 | K | 1191 | N | 385 (geo) | 20200000 |
| EPI_ISL_425404 | Spike | hCoV-19/England/CAMB-75543/2020 | K | 1191 | Q | 2 (geo) | 20200319 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | K | 1191 | A | 1 | 20200521 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | K | 1191 | G | 3 (geo) | 20200408 |
| EPI_ISL_637343 | Spike | hCoV-19/England/NOTT-119540/2020 | K | 1191 | R | 4 (geo) | 20201101 |
| EPI_ISL_764334 | Spike | hCoV-19/England/CAMB-A97E64/2020 | K | 1191 | M | 1 | 20201212 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | N | 1192 | H | 5 (geo) | 20200408 |
| EPI_ISL_634837 | Spike | hCoV-19/France/ARA-SC192/2020 | N | 1192 | S | 4 (geo) | 20200428 |
| EPI_ISL_645761 | Spike | hCoV-19/England/ALDP-B1BADC/2020 | N | 1192 | D | 2 (geo) | 20201101 |
| EPI_ISL_413622 | Spike | hCoV-19/USA/CruiseA-17/2020 | N | 1192 | T | 25 (geo) | 20200224 |
| EPI_ISL_583632 | Spike | hCoV-19/Austria/CeMM0664/2020 | N | 1192 | I | 1 | 20200515 |
| EPI_ISL_554611 | Spike | hCoV-19/England/ALDP-953AAD/2020 | N | 1192 | Y | 2 (geo) | 20200612 |
| EPI_ISL_603034 | Spike | hCoV-19/Brazil/SP-437/2020 | N | 1192 | K | 1 | 20200711 |
| EPI_ISL_750377 | Spike | hCoV-19/Denmark/DCGC-17616/2020 | L | 1193 | V | 1 | 20201214 |
| EPI_ISL_452390 | Spike | hCoV-19/Spain/AN-IBV-002032/2020 | L | 1193 | F | 2 (geo) | 20200317 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | N | 1194 | H | 9 (geo) | 20200420 |
| EPI_ISL_464547 | Spike | hCoV-19/England/201090235/2020 | N | 1194 | Y | 7 (geo) | 20200304 |
| EPI_ISL_452466 | Spike | hCoV-19/Spain/AN-IBV-001880/2020 | N | 1194 | S | 3 (geo) | 20200311 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | N | 1194 | M | 1 | 20200521 |
| EPI_ISL_452390 | Spike | hCoV-19/Spain/AN-IBV-002032/2020 | N | 1194 | K | 1 | 20200317 |
| EPI_ISL_832877 | Spike | hCoV-19/USA/ME-HETL-J0554/2021 | N | 1194 | D | 1 | 20210102 |
| EPI_ISL_594925 | Spike | hCoV-19/England/MILK-9EF62A/2020 | N | 1194 | I | 1 | 20200922 |
| EPI_ISL_498554 | Spike | hCoV-19/Lebanon/LB-LR10/2020 | E | 1195 | Q | 172 (geo) | 20200320 |
| EPI_ISL_654496 | Spike | hCoV-19/Spain/VC-IBV-98007997/2020 | E | 1195 | V | 2 (geo) | 20201016 |
| EPI_ISL_482185 | Spike | hCoV-19/England/LOND-D6838/2020 | E | 1195 | G | 13 (geo) | 20200424 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | E | 1195 | N | 1 | 20200420 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | E | 1195 | K | 2 (geo) | 20200521 |
| EPI_ISL_479155 | Spike | hCoV-19/England/OXON-B2559/2020 | E | 1195 | D | 12 (geo) | 20200000 |
| EPI_ISL_466187 | Spike | hCoV-19/England/20149035404/2020 | E | 1195 | H | 1 | 20200403 |
| EPI_ISL_481818 | Spike | hCoV-19/England/BRIS-12CBDF/2020 | S | 1196 | F | 3 (geo) | 20200418 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | S | 1196 | C | 1 | 20200420 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | S | 1196 | T | 1 | 20200521 |
| EPI_ISL_833532 | Spike | hCoV-19/Italy/CAM-TIGEM-933/2020 | L | 1197 | F | 4 (geo) | 20200507 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | L | 1197 | S | 1 | 20200420 |
| EPI_ISL_611981 | Spike | hCoV-19/England/LIVE-1DDD7D/2020 | L | 1197 | R | 1 | 20201009 |
| EPI_ISL_644701 | Spike | hCoV-19/France/OCC-SC532/2020 | L | 1197 | I | 4 (geo) | 20200313 |
| EPI_ISL_664606 | Spike | hCoV-19/England/LIVE-DBDDB3/2020 | I | 1198 | V | 2 (geo) | 20201030 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | I | 1198 | C | 1 | 20200420 |
| EPI_ISL_775812 | Spike | hCoV-19/Germany/HH-hpi-p1291/2020 | D | 1199 | Y | 28 (geo) | 20200315 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | D | 1199 | H | 16 (geo) | 20200420 |
| EPI_ISL_792531 | Spike | hCoV-19/Argentina/PAIS-G0007/2020 | D | 1199 | N | 17 (geo) | 20200323 |
| EPI_ISL_658723 | Spike | hCoV-19/England/QEUH-B3F6A1/2020 | D | 1199 | G | 3 (geo) | 20201108 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | D | 1199 | T | 1 | 20200521 |
| EPI_ISL_546103 | Spike | hCoV-19/USA/TX-HMH-6585/2020 | D | 1199 | A | 1 | 20200624 |
| EPI_ISL_424348 | Spike | hCoV-19/Mexico/CMX-INER-02/2020 | D | 1199 | E | 3 (geo) | 20200313 |
| EPI_ISL_740076 | Spike | hCoV-19/Luxembourg/LNS2198752/2020 | D | 1199 | V | 1 | 20201031 |
| EPI_ISL_613731 | Spike | hCoV-19/USA/FL-BPHL-1829/2020 | L | 1200 | F | 56 (geo) | 20200408 |
| EPI_ISL_554615 | Spike | hCoV-19/England/ALDP-943FCF/2020 | L | 1200 | I | 1 | 20200607 |
| EPI_ISL_494327 | Spike | hCoV-19/Wales/PHWC-168ADA/2020 | Q | 1201 | H | 62 (geo) | 20200419 |
| EPI_ISL_560721 | Spike | hCoV-19/England/GSTT-6729/2020 | Q | 1201 | K | 55 (geo) | 20200329 |
| EPI_ISL_478890 | Spike | hCoV-19/England/OXON-B05F1/2020 | Q | 1201 | S | 2 (geo) | 20200420 |
| EPI_ISL_869231 | Spike | hCoV-19/USA/NM-UNM-01720/2021 | Q | 1201 | L | 1 | 20210109 |
| EPI_ISL_780013 | Spike | hCoV-19/Spain/MD-IBV-99012375/2020 | Q | 1201 | R | 1 | 20201118 |
| EPI_ISL_593787 | Spike | hCoV-19/England/204221380/2020 | E | 1202 | Q | 197 (geo) | 20200000 |
| EPI_ISL_509332 | Spike | hCoV-19/South Africa/KRISP-K001078/2020 | E | 1202 | D | 15 (geo) | 20200703 |
| EPI_ISL_599954 | Spike | hCoV-19/England/MILK-A05A8B/2020 | E | 1202 | K | 11 (geo) | 20200929 |
| EPI_ISL_479999 | Spike | hCoV-19/Japan/PG-0324/2020 | E | 1202 | A | 8 (geo) | 20200312 |
| EPI_ISL_483141 | Spike | hCoV-19/Germany/BE-RKI-Z-0006/2020 | E | 1202 | H | 9 (geo) | 20200420 |
| EPI_ISL_572552 | Spike | hCoV-19/England/LIVE-1D15F9/2020 | E | 1202 | V | 7 (geo) | 20200514 |
| EPI_ISL_671337 | Spike | hCoV-19/Ireland/D-NVRL-MPA24205/2020 | E | 1202 | G | 4 (geo) | 20200501 |
| EPI_ISL_692838 | Spike | hCoV-19/USA/MA-MASPHL-00909/2020 | L | 1203 | I | 3 (geo) | 20201019 |
| EPI_ISL_426422 | Spike | hCoV-19/USA/IN_72003/2020 | L | 1203 | F | 71 (geo) | 20200307 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | L | 1203 | C | 1 | 20200521 |
| EPI_ISL_649942 | Spike | hCoV-19/France/ARA-SC303/2020 | G | 1204 | E | 4 (geo) | 20200321 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | G | 1204 | S | 1 | 20200521 |
| EPI_ISL_440467 | Spike | hCoV-19/England/CAMB-757C5/2020 | G | 1204 | V | 2 (geo) | 20200311 |
| EPI_ISL_826271 | Spike | hCoV-19/Hungary/UD-P542/2021 | G | 1204 | R | 1 | 20210108 |
| EPI_ISL_416670 | Spike | hCoV-19/USA/WA-UW132/2020 | K | 1205 | N | 51 (geo) | 20200312 |
| EPI_ISL_593812 | Spike | hCoV-19/England/204221438/2020 | K | 1205 | R | 11 (geo) | 20200000 |
| EPI_ISL_533223 | Spike | hCoV-19/England/QEUH-7A9F8D/2020 | K | 1205 | Q | 7 (geo) | 20200712 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | Y | 1206 | E | 1 | 20200521 |
| EPI_ISL_489530 | Spike | hCoV-19/Scotland/GCVR-171A92/2020 | Y | 1206 | H | 1 | 20200327 |
| EPI_ISL_819426 | Spike | hCoV-19/England/PORT-2E897A/2020 | E | 1207 | D | 140 (geo) | 20200000 |
| EPI_ISL_483190 | Spike | hCoV-19/USA/CA-ALSR-0508-SAN/2020 | E | 1207 | A | 4 (geo) | 20200331 |
| EPI_ISL_417482 | Spike | hCoV-19/Ecuador/HEE-01/2020 | E | 1207 | V | 2 (geo) | 20200309 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | E | 1207 | H | 1 | 20200100 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | E | 1207 | S | 1 | 20200521 |
| EPI_ISL_429666 | Spike | hCoV-19/Brazil/MG-CV3/2020 | E | 1207 | K | 3 (geo) | 20200309 |
| EPI_ISL_490552 | Spike | hCoV-19/England/NORW-EE536/2020 | Q | 1208 | H | 149 (geo) | 20200000 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | Q | 1208 | L | 1 | 20200100 |
| EPI_ISL_679048 | Spike | hCoV-19/England/BIRM-6A392/2020 | Q | 1208 | R | 1 | 20201109 |
| EPI_ISL_755501 | Spike | hCoV-19/USA/ME-HETL-J0387/2020 | Q | 1208 | D | 1 | 20201215 |
| EPI_ISL_538146 | Spike | hCoV-19/Spain/AN-IBV-98001768/2020 | Q | 1208 | E | 1 | 20200410 |
| EPI_ISL_497885 | Spike | hCoV-19/India/MH-AFMC-5280/2020 | Q | 1208 | N | 1 | 20200521 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | Y | 1209 | L | 1 | 20200100 |
| EPI_ISL_415532 | Spike | hCoV-19/Netherlands/ZuidHolland_28/2020 | Y | 1209 | H | 1 | 20200309 |
| EPI_ISL_775257 | Spike | hCoV-19/Italy/CAM-INTPas-19/2020 | I | 1210 | V | 8 (geo) | 20200330 |
| EPI_ISL_421472 | Spike | hCoV-19/Portugal/PT0069/2020 | I | 1210 | T | 10 (geo) | 20200321 |
| EPI_ISL_553943 | Spike | hCoV-19/England/ALDP-956390/2020 | I | 1210 | M | 3 (geo) | 20200608 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | I | 1210 | C | 1 | 20200100 |
| EPI_ISL_755501 | Spike | hCoV-19/USA/ME-HETL-J0387/2020 | I | 1210 | L | 1 | 20201215 |
| EPI_ISL_496673 | Spike | hCoV-19/Panama/330775/2020 | I | 1210 | R | 1 | 20200301 |
| EPI_ISL_812804 | Spike | hCoV-19/Egypt/CCHE57357-A-28/2020 | K | 1211 | E | 2 (geo) | 20200704 |
| EPI_ISL_775257 | Spike | hCoV-19/Italy/CAM-INTPas-19/2020 | K | 1211 | T | 2 (geo) | 20200330 |
| EPI_ISL_460813 | Spike | hCoV-19/Netherlands/Overijssel_24/2020 | K | 1211 | N | 1 | 20200414 |
| EPI_ISL_520042 | Spike | hCoV-19/Australia/VIC5277/2020 | K | 1211 | Q | 1 | 20200717 |
| EPI_ISL_787158 | Spike | hCoV-19/USA/TX-HMH-MCoV-13865/2020 | W | 1212 | C | 1 | 20200817 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | W | 1212 | M | 1 | 20200426 |
| EPI_ISL_465201 | Spike | hCoV-19/England/20169016504/2020 | W | 1212 | L | 1 | 20200417 |
| EPI_ISL_568484 | Spike | hCoV-19/Iran/K1r-6/2020 | P | 1213 | A | 2 (geo) | 20200322 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | P | 1213 | Q | 2 (geo) | 20200100 |
| EPI_ISL_475693 | Spike | hCoV-19/USA/CA-CSMC78/2020 | P | 1213 | T | 1 | 20200326 |
| EPI_ISL_528950 | Spike | hCoV-19/England/20166019404/2020 | W | 1214 | Y | 1 | 20200414 |
| EPI_ISL_466089 | Spike | hCoV-19/England/20149003004/2020 | W | 1214 | L | 1 | 20200403 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | W | 1214 | M | 1 | 20200426 |
| EPI_ISL_512430 | Spike | hCoV-19/England/PORT-2F5DBA/2020 | W | 1214 | F | 2 (geo) | 20200530 |
| EPI_ISL_549410 | Spike | hCoV-19/England/CAMC-9B2462/2020 | W | 1214 | G | 1 | 20200904 |
| EPI_ISL_790403 | Spike | hCoV-19/USA/TX-HMH-MCoV-12575/2020 | W | 1214 | C | 3 (geo) | 20200831 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | Y | 1215 | V | 1 | 20200426 |
| EPI_ISL_478284 | Spike | hCoV-19/England/EXET-1362DD/2020 | Y | 1215 | K | 1 | 20200412 |
| EPI_ISL_478284 | Spike | hCoV-19/England/EXET-1362DD/2020 | I | 1216 | V | 34 (geo) | 20200412 |
| EPI_ISL_416370 | Spike | hCoV-19/Shanghai/SH0067/2020 | I | 1216 | T | 19 (geo) | 20200201 |
| EPI_ISL_539388 | Spike | hCoV-19/Switzerland/AG-ETHZ-260063/2020 | I | 1216 | F | 1 | 20200824 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | I | 1216 | H | 1 | 20200426 |
| EPI_ISL_690116 | Spike | hCoV-19/Japan/PG-5003/2020 | I | 1216 | S | 2 (geo) | 20200800 |
| EPI_ISL_621442 | Spike | hCoV-19/Denmark/DCGC-4904/2020 | I | 1216 | M | 3 (geo) | 20200921 |
| EPI_ISL_816669 | Spike | hCoV-19/England/TFCI-26F9709/2020 | W | 1217 | L | 4 (geo) | 20200000 |
| EPI_ISL_626568 | Spike | hCoV-19/Mongolia/3623/2020 | W | 1217 | C | 3 (geo) | 20200321 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | L | 1218 | A | 1 | 20200426 |
| EPI_ISL_646933 | Spike | hCoV-19/England/ALDP-B242C9/2020 | L | 1218 | P | 2 (geo) | 20201104 |
| EPI_ISL_583431 | Spike | hCoV-19/USA/NY-MSK-3A/2020 | G | 1219 | S | 17 (geo) | 20200319 |
| EPI_ISL_548752 | Spike | hCoV-19/Canada/ON-PHL-20-00077/2020 | G | 1219 | C | 755 (geo) | 20200000 |
| EPI_ISL_740989 | Spike | hCoV-19/England/CAMB-1BD906/2020 | G | 1219 | V | 468 (geo) | 20200000 |
| EPI_ISL_745044 | Spike | hCoV-19/Israel/CVL-45517/2020 | G | 1219 | F | 1 | 20201207 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | G | 1219 | R | 1 | 20200426 |
| EPI_ISL_562145 | Spike | hCoV-19/Australia/VIC10425/2020 | G | 1219 | A | 1 | 20200000 |
| EPI_ISL_849712 | Spike | hCoV-19/Australia/QLD1402/2020 | F | 1220 | L | 5 (geo) | 20200320 |
| EPI_ISL_593821 | Spike | hCoV-19/England/204221454/2020 | F | 1220 | V | 1 | 20200000 |
| EPI_ISL_800292 | Spike | hCoV-19/England/CAMC-D11B68/2020 | F | 1220 | Y | 1 | 20201226 |
| EPI_ISL_550724 | Spike | hCoV-19/England/MILK-99DD53/2020 | F | 1220 | I | 1 | 20200831 |
| EPI_ISL_541893 | Spike | hCoV-19/Spain/MD-IBV-99007119/2020 | I | 1221 | M | 1 | 20200728 |
| EPI_ISL_497697 | Spike | hCoV-19/USA/WA-S2269/2020 | I | 1221 | T | 6 (geo) | 20200609 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | I | 1221 | Y | 1 | 20200426 |
| EPI_ISL_464087 | Spike | hCoV-19/Belgium/HC-0408293/2020 | I | 1221 | V | 2 (geo) | 20200408 |
| EPI_ISL_787180 | Spike | hCoV-19/USA/TX-HMH-MCoV-13888/2020 | A | 1222 | V | 9 (geo) | 20200817 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | A | 1222 | S | 1 | 20200426 |
| EPI_ISL_603119 | Spike | hCoV-19/Lithuania/MR-LUHS-Eilnr44/2020 | A | 1222 | D | 1 | 20200408 |
| EPI_ISL_432070 | Spike | hCoV-19/Wales/PHWC-27373/2020 | G | 1223 | S | 175 (geo) | 20200331 |
| EPI_ISL_628319 | Spike | hCoV-19/England/PORT-2D3277/2020 | G | 1223 | V | 3 (geo) | 20200409 |
| EPI_ISL_516398 | Spike | hCoV-19/USA/MI-MDHHS-SC21671/2020 | G | 1223 | C | 1 | 20200707 |
| EPI_ISL_476948 | Spike | hCoV-19/Belgium/rega-0409439/2020 | L | 1224 | F | 376 (geo) | 20200409 |
| EPI_ISL_754978 | Spike | hCoV-19/USA/CA-CDPH095/2020 | L | 1224 | V | 6 (geo) | 20200817 |
| EPI_ISL_604705 | Spike | hCoV-19/USA/NY-QDX-2330/2020 | L | 1224 | S | 33 (geo) | 20200316 |
| EPI_ISL_814089 | Spike | hCoV-19/Turkey/HSGM-2004082/2020 | L | 1224 | M | 1 | 20200515 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | I | 1225 | F | 199 (geo) | 20200000 |
| EPI_ISL_837550 | Spike | hCoV-19/Bolivia/26953/2020 | I | 1225 | V | 6 (geo) | 20200503 |
| EPI_ISL_806961 | Spike | hCoV-19/USA/WA-S3031/2020 | I | 1225 | S | 2 (geo) | 20200819 |
| EPI_ISL_779707 | Spike | hCoV-19/Italy/LOM-UniMI06/2020 | I | 1225 | T | 3 (geo) | 20200224 |
| EPI_ISL_598991 | Spike | hCoV-19/Scotland/QEUH-A1FBB8/2020 | A | 1226 | V | 10 (geo) | 20201001 |
| EPI_ISL_763612 | Spike | hCoV-19/England/PORT-2EE7F2/2020 | A | 1226 | S | 2 (geo) | 20201217 |
| EPI_ISL_819408 | Spike | hCoV-19/England/NORW-223DA4/2020 | I | 1227 | M | 91 (geo) | 20200000 |
| EPI_ISL_542585 | Spike | hCoV-19/USA/TX-HMH-1205/2020 | I | 1227 | V | 6 (geo) | 20200331 |
| EPI_ISL_572288 | Spike | hCoV-19/USA/VA-DCLS-1295/2020 | I | 1227 | L | 2 (geo) | 20200723 |
| EPI_ISL_553400 | Spike | hCoV-19/England/ALDP-9557E0/2020 | V | 1228 | I | 21 (geo) | 20200612 |
| EPI_ISL_872600 | Spike | hCoV-19/Nigeria/LA-CV525/2020 | V | 1228 | L | 664 (geo) | 20200000 |
| EPI_ISL_480790 | Spike | hCoV-19/USA/FL-BPHL-0139/2020 | V | 1228 | A | 11 (geo) | 20200306 |
| EPI_ISL_461513 | Spike | hCoV-19/England/BIRM-5F521/2020 | M | 1229 | I | 402 (geo) | 20200000 |
| EPI_ISL_484325 | Spike | hCoV-19/England/NORT-29F541/2020 | M | 1229 | T | 166 (geo) | 20200429 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | M | 1229 | L | 16 (geo) | 20200000 |
| EPI_ISL_507100 | Spike | hCoV-19/England/LOND-124D48E/2020 | M | 1229 | V | 1 | 20200430 |
| EPI_ISL_816139 | Spike | hCoV-19/England/PORT-2E89E3/2020 | V | 1230 | L | 35 (geo) | 20200000 |
| EPI_ISL_507007 | Spike | hCoV-19/Iran/IRVSH-01/2020 | V | 1230 | E | 1 | 20200501 |
| EPI_ISL_694387 | Spike | hCoV-19/USA/AZ-TG345029/2020 | V | 1230 | A | 4 (geo) | 20200601 |
| EPI_ISL_645051 | Spike | hCoV-19/Poland/PL_MCB_52/2020 | V | 1230 | M | 3 (geo) | 20200510 |
| EPI_ISL_685830 | Spike | hCoV-19/Japan/PG-2225/2020 | T | 1231 | A | 32 (geo) | 20200400 |
| EPI_ISL_664349 | Spike | hCoV-19/England/LIVE-DBD348/2020 | T | 1231 | P | 4 (geo) | 20201027 |
| EPI_ISL_494717 | Spike | hCoV-19/USA/CA-ALSR-1653/2020 | T | 1231 | I | 4 (geo) | 20200401 |
| EPI_ISL_651549 | Spike | hCoV-19/England/QEUH-AAF009/2020 | T | 1231 | S | 3 (geo) | 20201020 |
| EPI_ISL_775852 | Spike | hCoV-19/Germany/HH-hpi-p1413/2020 | I | 1232 | T | 9 (geo) | 20200309 |
| EPI_ISL_732255 | Spike | hCoV-19/Portugal/PT2040/2020 | I | 1232 | S | 7 (geo) | 20201110 |
| EPI_ISL_635635 | Spike | hCoV-19/USA/CA-ALSR-2692/2020 | I | 1232 | F | 15 (geo) | 20200721 |
| EPI_ISL_420683 | Spike | hCoV-19/England/20139044504/2020 | I | 1232 | V | 3 (geo) | 20200328 |
| EPI_ISL_622921 | Spike | hCoV-19/South Africa/R13502-20/2020 | I | 1232 | L | 4 (geo) | 20200709 |
| EPI_ISL_681867 | Spike | hCoV-19/USA/TX-DSHS-1567/2020 | M | 1233 | K | 1 | 20200624 |
| EPI_ISL_437041 | Spike | hCoV-19/Denmark/ALAB-SSI-691/2020 | M | 1233 | V | 31 (geo) | 20200327 |
| EPI_ISL_487676 | Spike | hCoV-19/Scotland/EDB5509/2020 | M | 1233 | I | 9 (geo) | 20200419 |
| EPI_ISL_700521 | Spike | hCoV-19/South Africa/NHLS-UCT-GS-2211/2020 | M | 1233 | T | 19 (geo) | 20200805 |
| EPI_ISL_620051 | Spike | hCoV-19/Denmark/DCGC-6291/2020 | L | 1234 | I | 77 (geo) | 20201005 |
| EPI_ISL_775852 | Spike | hCoV-19/Germany/HH-hpi-p1413/2020 | L | 1234 | P | 1 | 20200309 |
| EPI_ISL_760866 | Spike | hCoV-19/England/QEUH-C02891/2020 | L | 1234 | F | 3 (geo) | 20201203 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | L | 1234 | V | 1 | 20200000 |
| EPI_ISL_831433 | Spike | hCoV-19/Germany/BE-RKI-I-0085/2020 | C | 1235 | F | 238 (geo) | 20200000 |
| EPI_ISL_460074 | Spike | hCoV-19/USA/MN-MDH-93/2020 | C | 1235 | L | 2 (geo) | 20200314 |
| EPI_ISL_790994 | Spike | hCoV-19/Netherlands/NH-RIVM-20970/2020 | C | 1235 | G | 1 | 20201210 |
| EPI_ISL_791552 | Spike | hCoV-19/USA/MA-MASPHL-00052/2020 | C | 1235 | S | 3 (geo) | 20200403 |
| EPI_ISL_788177 | Spike | hCoV-19/USA/TX-HMH-MCoV-13026/2020 | C | 1235 | Y | 1 | 20200828 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | C | 1236 | S | 81 (geo) | 20200100 |
| EPI_ISL_460074 | Spike | hCoV-19/USA/MN-MDH-93/2020 | C | 1236 | L | 2 (geo) | 20200314 |
| EPI_ISL_548142 | Spike | hCoV-19/New Zealand/20VR3852/2020 | C | 1236 | F | 36 (geo) | 20200000 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | C | 1236 | G | 1 | 20200000 |
| EPI_ISL_853964 | Spike | hCoV-19/Austria/CeMM1947/2020 | M | 1237 | I | 355 (geo) | 20200000 |
| EPI_ISL_462844 | Spike | hCoV-19/Canada/BC_23348019/2020 | M | 1237 | T | 222 (geo) | 20200300 |
| EPI_ISL_522852 | Spike | hCoV-19/USA/MD-MDH-0119/2020 | M | 1237 | V | 18 (geo) | 20200526 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | M | 1237 | Y | 3 (geo) | 20200100 |
| EPI_ISL_539486 | Spike | hCoV-19/India/PB-IMT-L176/2020 | M | 1237 | R | 1 | 20200430 |
| EPI_ISL_476382 | Spike | hCoV-19/Brazil/SP-L22-CD486/2020 | M | 1237 | L | 8 (geo) | 20200405 |
| EPI_ISL_429870 | Spike | hCoV-19/Turkey/HSGM-8990/2020 | T | 1238 | I | 105 (geo) | 20200322 |
| EPI_ISL_460074 | Spike | hCoV-19/USA/MN-MDH-93/2020 | T | 1238 | D | 2 (geo) | 20200314 |
| EPI_ISL_538911 | Spike | hCoV-19/England/LEED-2A98A5/2020 | T | 1238 | N | 4 (geo) | 20200410 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | T | 1238 | L | 1 | 20201105 |
| EPI_ISL_722882 | Spike | hCoV-19/Italy/BAS-IZSPB-380PT/2020 | T | 1238 | A | 5 (geo) | 20201025 |
| EPI_ISL_759046 | Spike | hCoV-19/Denmark/DCGC-20493/2020 | T | 1238 | P | 1 | 20201221 |
| EPI_ISL_475586 | Spike | hCoV-19/USA/CA-CSMC110/2020 | S | 1239 | I | 5 (geo) | 20200322 |
| EPI_ISL_460074 | Spike | hCoV-19/USA/MN-MDH-93/2020 | S | 1239 | Q | 2 (geo) | 20200314 |
| EPI_ISL_484002 | Spike | hCoV-19/England/GSTT-265D703/2020 | S | 1239 | T | 12 (geo) | 20200324 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | S | 1239 | E | 1 | 20200100 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | S | 1239 | A | 1 | 20201105 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | S | 1239 | N | 3 (geo) | 20200329 |
| EPI_ISL_681711 | Spike | hCoV-19/Ireland/CE-UHL23/2020 | S | 1239 | C | 1 | 20200407 |
| EPI_ISL_854053 | Spike | hCoV-19/Austria/CeMM1620/2020 | S | 1239 | G | 2 (geo) | 20200000 |
| EPI_ISL_719400 | Spike | hCoV-19/England/CAMC-C3F41F/2020 | S | 1239 | D | 1 | 20201210 |
| EPI_ISL_494128 | Spike | hCoV-19/Wales/PHWC-166ED0/2020 | C | 1240 | F | 28 (geo) | 20200622 |
| EPI_ISL_460074 | Spike | hCoV-19/USA/MN-MDH-93/2020 | C | 1240 | L | 2 (geo) | 20200314 |
| EPI_ISL_537394 | Spike | hCoV-19/Spain/RI-IBV-99005851/2020 | C | 1240 | R | 1 | 20200401 |
| EPI_ISL_452948 | Spike | hCoV-19/England/CAMB-1B0BA3/2020 | C | 1240 | S | 2 (geo) | 20200511 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | C | 1240 | T | 2 (geo) | 20200329 |
| EPI_ISL_479585 | Spike | hCoV-19/Singapore/507/2020 | C | 1240 | Y | 1 | 20200515 |
| EPI_ISL_460074 | Spike | hCoV-19/USA/MN-MDH-93/2020 | C | 1241 | L | 2 (geo) | 20200314 |
| EPI_ISL_572070 | Spike | hCoV-19/USA/CA-QDX-1418/2020 | C | 1241 | Y | 3 (geo) | 20200318 |
| EPI_ISL_515317 | Spike | hCoV-19/USA/NV-NSPHL-A0031/2020 | C | 1241 | F | 4 (geo) | 20200321 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | C | 1241 | S | 1 | 20200100 |
| EPI_ISL_465643 | Spike | hCoV-19/England/20199032404/2020 | C | 1241 | R | 1 | 20200506 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | C | 1241 | I | 1 | 20200329 |
| EPI_ISL_509004 | Spike | hCoV-19/France/ARA-9476/2020 | S | 1242 | I | 60 (geo) | 20200316 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | S | 1242 | C | 3 (geo) | 20200329 |
| EPI_ISL_492929 | Spike | hCoV-19/England/NORT-28C301/2020 | S | 1242 | T | 7 (geo) | 20200513 |
| EPI_ISL_413695 | Spike | hCoV-19/China/WF0006/2020 | S | 1242 | L | 1 | 20200100 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | S | 1242 | P | 1 | 20201105 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | S | 1242 | R | 2 (geo) | 20200000 |
| EPI_ISL_581766 | Spike | hCoV-19/Switzerland/BL-42208281/2020 | S | 1242 | N | 1 | 20200326 |
| EPI_ISL_456489 | Spike | hCoV-19/Australia/VIC1572/2020 | S | 1242 | G | 2 (geo) | 20200507 |
| EPI_ISL_842007 | Spike | hCoV-19/England/PORT-2E48BD/2020 | C | 1243 | F | 125 (geo) | 20200000 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | C | 1243 | Y | 5 (geo) | 20200329 |
| EPI_ISL_479034 | Spike | hCoV-19/England/OXON-B16A2/2020 | C | 1243 | Q | 2 (geo) | 20200427 |
| EPI_ISL_492929 | Spike | hCoV-19/England/NORT-28C301/2020 | C | 1243 | S | 2 (geo) | 20200513 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | C | 1243 | W | 2 (geo) | 20200000 |
| EPI_ISL_497888 | Spike | hCoV-19/India/MH-BJMC-1760/2020 | C | 1243 | V | 1 | 20200420 |
| EPI_ISL_775770 | Spike | hCoV-19/Germany/HH-hpi-p1605/2020 | L | 1244 | F | 25 (geo) | 20200316 |
| EPI_ISL_848139 | Spike | hCoV-19/Ireland/D-20G48052/2020 | L | 1244 | P | 9 (geo) | 20200404 |
| EPI_ISL_694109 | Spike | hCoV-19/USA/AZ-TG276548/2020 | L | 1244 | I | 15 (geo) | 20200415 |
| EPI_ISL_479034 | Spike | hCoV-19/England/OXON-B16A2/2020 | L | 1244 | M | 2 (geo) | 20200427 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | L | 1244 | T | 1 | 20201105 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | L | 1244 | S | 2 (geo) | 20200300 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | L | 1244 | A | 1 | 20200329 |
| EPI_ISL_719400 | Spike | hCoV-19/England/CAMC-C3F41F/2020 | L | 1244 | W | 1 | 20201210 |
| EPI_ISL_775257 | Spike | hCoV-19/Italy/CAM-INTPas-19/2020 | L | 1244 | R | 1 | 20200330 |
| EPI_ISL_872347 | Spike | hCoV-19/France/PDL-IPP00698/2021 | K | 1245 | Q | 4 (geo) | 20210107 |
| EPI_ISL_571401 | Spike | hCoV-19/USA/WA-QDX-528/2020 | K | 1245 | N | 19 (geo) | 20200318 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | K | 1245 | R | 15 (geo) | 20200300 |
| EPI_ISL_609393 | Spike | hCoV-19/England/CAMC-A4131F/2020 | K | 1245 | E | 2 (geo) | 20201006 |
| EPI_ISL_577607 | Spike | hCoV-19/Australia/TAS00279/2020 | K | 1245 | T | 2 (geo) | 20200809 |
| EPI_ISL_800292 | Spike | hCoV-19/England/CAMC-D11B68/2020 | K | 1245 | D | 1 | 20201226 |
| EPI_ISL_440230 | Spike | hCoV-19/England/CAMB-731C9/2020 | G | 1246 | V | 5 (geo) | 20200323 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | G | 1246 | A | 3 (geo) | 20200300 |
| EPI_ISL_462651 | Spike | hCoV-19/USA/MI-MDHHS-SC20569/2020 | G | 1246 | S | 24 (geo) | 20200430 |
| EPI_ISL_635716 | Spike | hCoV-19/USA/CA-ALSR-2857/2020 | G | 1246 | C | 2 (geo) | 20200805 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | G | 1246 | K | 1 | 20201105 |
| EPI_ISL_676679 | Spike | hCoV-19/USA/NY-Wadsworth-125725-01/2020 | G | 1246 | D | 2 (geo) | 20200530 |
| EPI_ISL_492929 | Spike | hCoV-19/England/NORT-28C301/2020 | G | 1246 | H | 1 | 20200513 |
| EPI_ISL_775257 | Spike | hCoV-19/Italy/CAM-INTPas-19/2020 | G | 1246 | F | 1 | 20200330 |
| EPI_ISL_632288 | Spike | hCoV-19/USA/MA-JLL-17S/2020 | C | 1247 | F | 195 (geo) | 20200000 |
| EPI_ISL_475943 | Spike | hCoV-19/Singapore/412/2020 | C | 1247 | Y | 16 (geo) | 20200518 |
| EPI_ISL_489494 | Spike | hCoV-19/England/CAMB-1AD356/2020 | C | 1247 | G | 9 (geo) | 20200424 |
| EPI_ISL_812328 | Spike | hCoV-19/USA/FL-USAFSAM-S136/2020 | C | 1247 | R | 5 (geo) | 20200609 |
| EPI_ISL_658800 | Spike | hCoV-19/England/CAMC-B37E65/2020 | C | 1247 | N | 1 | 20201105 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | C | 1247 | S | 8 (geo) | 20200000 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | C | 1247 | V | 2 (geo) | 20200300 |
| EPI_ISL_582520 | Spike | hCoV-19/Portugal/PT1191/2020 | C | 1247 | L | 1 | 20200329 |
| EPI_ISL_492929 | Spike | hCoV-19/England/NORT-28C301/2020 | C | 1247 | A | 1 | 20200513 |
| EPI_ISL_603264 | Spike | hCoV-19/USA/WA-UW-361/2020 | C | 1248 | F | 34 (geo) | 20200311 |
| EPI_ISL_475853 | Spike | hCoV-19/Austria/CeMM0425/2020 | C | 1248 | R | 7 (geo) | 20200305 |
| EPI_ISL_448172 | Spike | hCoV-19/Scotland/CVR2278/2020 | C | 1248 | S | 10 (geo) | 20200412 |
| EPI_ISL_754073 | Spike | hCoV-19/Nepal/70N/2020 | C | 1248 | Y | 7 (geo) | 20200803 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | C | 1248 | W | 2 (geo) | 20200000 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | C | 1248 | T | 2 (geo) | 20200300 |
| EPI_ISL_800292 | Spike | hCoV-19/England/CAMC-D11B68/2020 | C | 1248 | H | 1 | 20201226 |
| EPI_ISL_849276 | Spike | hCoV-19/USA/UT-UPHL-2101264042/2020 | S | 1249 | P | 4 (geo) | 20200616 |
| EPI_ISL_490067 | Spike | hCoV-19/Singapore/617/2020 | S | 1249 | Y | 15 (geo) | 20200508 |
| EPI_ISL_624075 | Spike | hCoV-19/England/ALDP-AA1377/2020 | S | 1249 | F | 3 (geo) | 20201022 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | S | 1249 | T | 2 (geo) | 20200300 |
| EPI_ISL_775257 | Spike | hCoV-19/Italy/CAM-INTPas-19/2020 | S | 1249 | L | 1 | 20200330 |
| EPI_ISL_636728 | Spike | hCoV-19/England/C200037134/2020 | C | 1250 | F | 310 (geo) | 20200000 |
| EPI_ISL_424232 | Spike | hCoV-19/USA/WA-UW-1708/2020 | C | 1250 | Y | 4 (geo) | 20200321 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | C | 1250 | W | 1 | 20200000 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | C | 1250 | L | 3 (geo) | 20200300 |
| EPI_ISL_576041 | Spike | hCoV-19/Scotland/QEUH-9C8EB6/2020 | C | 1250 | N | 2 (geo) | 20200914 |
| EPI_ISL_710490 | Spike | hCoV-19/Spain/AS-HUCA-232023718/2020 | G | 1251 | V | 186 (geo) | 20200325 |
| EPI_ISL_496327 | Spike | hCoV-19/USA/WA-S1901/2020 | G | 1251 | R | 18 (geo) | 20200528 |
| EPI_ISL_560835 | Spike | hCoV-19/USA/UT-UPHL-04405/2020 | G | 1251 | E | 7 (geo) | 20200519 |
| EPI_ISL_693242 | Spike | hCoV-19/Brazil/SP-702/2020 | G | 1251 | A | 2 (geo) | 20200630 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | G | 1251 | S | 2 (geo) | 20200300 |
| EPI_ISL_451365 | Spike | hCoV-19/Sichuan/SC-PHCC2-045/2020 | S | 1252 | F | 511 (geo) | 20200126 |
| EPI_ISL_430475 | Spike | hCoV-19/Australia/VIC992/2020 | S | 1252 | P | 98 (geo) | 20200331 |
| EPI_ISL_417322 | Spike | hCoV-19/USA/CA-CDPH-UC18/2020 | S | 1252 | A | 2 (geo) | 20200304 |
| EPI_ISL_507781 | Spike | hCoV-19/USA/MI-MDHHS-SC20995/2020 | S | 1252 | Y | 3 (geo) | 20200527 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | S | 1252 | Q | 2 (geo) | 20200300 |
| EPI_ISL_733585 | Spike | hCoV-19/England/C200027424/2020 | C | 1253 | F | 414 (geo) | 20200000 |
| EPI_ISL_473499 | Spike | hCoV-19/England/CAMB-1B4B45/2020 | C | 1253 | G | 2 (geo) | 20200610 |
| EPI_ISL_787001 | Spike | hCoV-19/USA/TX-HMH-MCoV-15517/2020 | C | 1253 | S | 1 | 20201023 |
| EPI_ISL_419930 | Spike | hCoV-19/Australia/VIC235/2020 | C | 1253 | Y | 4 (geo) | 20200321 |
| EPI_ISL_480696 | Spike | hCoV-19/Australia/NT49/2020 | C | 1254 | F | 48 (geo) | 20200000 |
| EPI_ISL_626568 | Spike | hCoV-19/Mongolia/3623/2020 | - | 1254 | K | 2 (geo) | 20200321 |
| EPI_ISL_626568 | Spike | hCoV-19/Mongolia/3623/2020 | - | 1254 | F | 2 (geo) | 20200321 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | C | 1254 | N | 1 | 20200000 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | C | 1254 | S | 4 (geo) | 20200300 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | K | 1255 | W | 1 | 20200426 |
| EPI_ISL_594925 | Spike | hCoV-19/England/MILK-9EF62A/2020 | K | 1255 | N | 2 (geo) | 20200922 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | F | 1256 | L | 1 | 20200426 |
| EPI_ISL_525470 | Spike | hCoV-19/Dominican Republic/ICGEB_UNIBE032.8/2020 | F | 1256 | C | 2 (geo) | 20200506 |
| EPI_ISL_419930 | Spike | hCoV-19/Australia/VIC235/2020 | F | 1256 | I | 1 | 20200321 |
| EPI_ISL_848571 | Spike | hCoV-19/Brazil/PA-IEC173135/2020 | F | 1256 | Y | 1 | 20200529 |
| EPI_ISL_463985 | Spike | hCoV-19/Canada/ON_MU-S401/2020 | F | 1256 | H | 1 | 20200330 |
| EPI_ISL_664214 | Spike | hCoV-19/England/EXET-13A89B/2020 | D | 1257 | Y | 1 | 20201109 |
| EPI_ISL_472550 | Spike | hCoV-19/Wales/PHWC-15C884/2020 | D | 1257 | E | 9 (geo) | 20200505 |
| EPI_ISL_461243 | Spike | hCoV-19/Netherlands/Utrecht_45/2020 | D | 1257 | H | 1 | 20200414 |
| EPI_ISL_463985 | Spike | hCoV-19/Canada/ON_MU-S401/2020 | D | 1257 | S | 1 | 20200330 |
| EPI_ISL_695809 | Spike | hCoV-19/USA/AZ-TG640888/2020 | E | 1258 | V | 30 (geo) | 20200413 |
| EPI_ISL_693118 | Spike | hCoV-19/USA/MA-MASPHL-00439/2020 | E | 1258 | A | 2 (geo) | 20200428 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | E | 1258 | Q | 11 (geo) | 20200000 |
| EPI_ISL_428451 | Spike | hCoV-19/Guangdong/20SF179/2020 | E | 1258 | D | 18 (geo) | 20200122 |
| EPI_ISL_536222 | Spike | hCoV-19/Canada/QC-LSPQ-L00238812/2020 | E | 1258 | G | 1 | 20200324 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | E | 1258 | C | 1 | 20200426 |
| EPI_ISL_570045 | Spike | hCoV-19/USA/WA-UW-4127/2020 | E | 1258 | H | 1 | 20200331 |
| EPI_ISL_463985 | Spike | hCoV-19/Canada/ON_MU-S401/2020 | E | 1258 | K | 1 | 20200330 |
| EPI_ISL_426365 | Spike | hCoV-19/Mexico/CMX-INCMNSZ-05/2020 | D | 1259 | Y | 74 (geo) | 20200312 |
| EPI_ISL_416670 | Spike | hCoV-19/USA/WA-UW132/2020 | D | 1259 | H | 16 (geo) | 20200312 |
| EPI_ISL_788197 | Spike | hCoV-19/USA/TX-HMH-MCoV-13046/2020 | D | 1259 | N | 2 (geo) | 20200828 |
| EPI_ISL_524788 | Spike | hCoV-19/Brazil/MA-IEC164827/2020 | D | 1259 | A | 1 | 20200424 |
| EPI_ISL_511303 | Spike | hCoV-19/Portugal/PT1344/2020 | D | 1259 | E | 3 (geo) | 20200319 |
| EPI_ISL_752701 | Spike | hCoV-19/USA/HI-H200138/2020 | D | 1259 | V | 3 (geo) | 20200714 |
| EPI_ISL_463985 | Spike | hCoV-19/Canada/ON_MU-S401/2020 | D | 1259 | R | 1 | 20200330 |
| EPI_ISL_804919 | Spike | hCoV-19/USA/DC-DFS-PHL-0064/2020 | D | 1260 | Y | 146 (geo) | 20200329 |
| EPI_ISL_419782 | Spike | hCoV-19/Australia/VIC68/2020 | D | 1260 | N | 24 (geo) | 20200313 |
| EPI_ISL_477204 | Spike | hCoV-19/Italy/CAM-CEINGE-1/2020 | D | 1260 | H | 5 (geo) | 20200530 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | D | 1260 | E | 11 (geo) | 20200300 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | D | 1260 | S | 1 | 20200426 |
| EPI_ISL_801995 | Spike | hCoV-19/USA/NY-MSHSPSP-PV12443/2020 | D | 1260 | G | 2 (geo) | 20200405 |
| EPI_ISL_735701 | Spike | hCoV-19/England/MILK-C617C0/2020 | D | 1260 | A | 2 (geo) | 20201213 |
| EPI_ISL_454828 | Spike | hCoV-19/USA/NC_200386/2020 | S | 1261 | F | 37 (geo) | 20200300 |
| EPI_ISL_424594 | Spike | hCoV-19/Iceland/574/2020 | S | 1261 | C | 2 (geo) | 20200300 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | S | 1261 | N | 2 (geo) | 20200426 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | S | 1261 | T | 1 | 20200000 |
| EPI_ISL_618355 | Spike | hCoV-19/Denmark/DCGC-2096/2020 | S | 1261 | Y | 3 (geo) | 20200727 |
| EPI_ISL_406592 | Spike | hCoV-19/Shenzhen/SZTH-001/2020 | E | 1262 | G | 7 (geo) | 20200113 |
| EPI_ISL_477038 | Spike | hCoV-19/Canada/BC_26060645/2020 | E | 1262 | D | 10 (geo) | 20200400 |
| EPI_ISL_485715 | Spike | hCoV-19/Senegal/64033/2020 | E | 1262 | A | 9 (geo) | 20200612 |
| EPI_ISL_424594 | Spike | hCoV-19/Iceland/574/2020 | E | 1262 | Q | 3 (geo) | 20200300 |
| EPI_ISL_587780 | Spike | hCoV-19/England/ALDP-9FD261/2020 | E | 1262 | K | 5 (geo) | 20201002 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | E | 1262 | N | 2 (geo) | 20200300 |
| EPI_ISL_800292 | Spike | hCoV-19/England/CAMC-D11B68/2020 | E | 1262 | Y | 1 | 20201226 |
| EPI_ISL_457026 | Spike | hCoV-19/England/EXET-134FC9/2020 | P | 1263 | L | 1012 (geo) | 20200000 |
| EPI_ISL_547877 | Spike | hCoV-19/India/TG-NIV-906/2020 | P | 1263 | T | 116 (geo) | 20200000 |
| EPI_ISL_733013 | Spike | hCoV-19/Russia/PRI-RII-MH768S/2020 | P | 1263 | R | 13 (geo) | 20200811 |
| EPI_ISL_586364 | Spike | hCoV-19/Canada/ON-S153/2020 | P | 1263 | S | 19 (geo) | 20200324 |
| EPI_ISL_785696 | Spike | hCoV-19/USA/TX-HMH-MCoV-16012/2020 | P | 1263 | Q | 14 (geo) | 20200710 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | P | 1263 | D | 1 | 20200426 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | P | 1263 | Y | 2 (geo) | 20200300 |
| EPI_ISL_800292 | Spike | hCoV-19/England/CAMC-D11B68/2020 | P | 1263 | A | 1 | 20201226 |
| EPI_ISL_460267 | Spike | hCoV-19/USA/MA-MGH-00681/2020 | V | 1264 | L | 227 (geo) | 20200322 |
| EPI_ISL_635829 | Spike | hCoV-19/USA/CA-ALSR-3074/2020 | V | 1264 | F | 15 (geo) | 20200902 |
| EPI_ISL_479129 | Spike | hCoV-19/England/OXON-B2225/2020 | V | 1264 | A | 2 (geo) | 20200423 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | V | 1264 | I | 4 (geo) | 20200300 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | V | 1264 | N | 1 | 20200426 |
| EPI_ISL_605907 | Spike | hCoV-19/Bangladesh/DNAS-BSH-isl-9/2020 | V | 1264 | M | 5 (geo) | 20200429 |
| EPI_ISL_417979 | Spike | hCoV-19/Spain/MD-HLP-R2-15/2020 | L | 1265 | P | 8 (geo) | 20200303 |
| EPI_ISL_492283 | Spike | hCoV-19/England/BRIS-1854345/2020 | L | 1265 | F | 12 (geo) | 20200428 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | L | 1265 | Y | 1 | 20200426 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | L | 1265 | T | 2 (geo) | 20200300 |
| EPI_ISL_518622 | Spike | hCoV-19/Australia/VIC5828/2020 | L | 1265 | R | 1 | 20200722 |
| EPI_ISL_837521 | Spike | hCoV-19/USA/WA-UW-48596/2020 | L | 1265 | Q | 1 | 20201227 |
| EPI_ISL_579300 | Spike | hCoV-19/New Zealand/20VR2561/2020 | K | 1266 | R | 23 (geo) | 20200000 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | K | 1266 | A | 1 | 20200426 |
| EPI_ISL_684168 | Spike | hCoV-19/Japan/PG-0438/2020 | K | 1266 | H | 2 (geo) | 20200300 |
| EPI_ISL_837521 | Spike | hCoV-19/USA/WA-UW-48596/2020 | K | 1266 | I | 1 | 20201227 |
| EPI_ISL_800292 | Spike | hCoV-19/England/CAMC-D11B68/2020 | K | 1266 | Y | 1 | 20201226 |
| EPI_ISL_430816 | Spike | hCoV-19/Argentina/PAIS-A0025/2020 | G | 1267 | R | 7 (geo) | 20200418 |
| EPI_ISL_579325 | Spike | hCoV-19/New Zealand/20VR2660/2020 | G | 1267 | V | 19 (geo) | 20200000 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | G | 1267 | L | 1 | 20200426 |
| EPI_ISL_535403 | Spike | hCoV-19/South Africa/KRISP-K002520/2020 | G | 1267 | E | 1 | 20200807 |
| EPI_ISL_856703 | Spike | hCoV-19/England/210141392/2021 | G | 1267 | S | 1 | 20210106 |
| EPI_ISL_800292 | Spike | hCoV-19/England/CAMC-D11B68/2020 | G | 1267 | D | 1 | 20201226 |
| EPI_ISL_547076 | Spike | hCoV-19/USA/TX-HMH-5870/2020 | V | 1268 | A | 11 (geo) | 20200628 |
| EPI_ISL_523498 | Spike | hCoV-19/Netherlands/un-EMC-743/2020 | V | 1268 | F | 3 (geo) | 20200508 |
| EPI_ISL_523333 | Spike | hCoV-19/Netherlands/NB-EMC-210/2020 | V | 1268 | I | 7 (geo) | 20200000 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | V | 1268 | L | 4 (geo) | 20200408 |
| EPI_ISL_856703 | Spike | hCoV-19/England/210141392/2021 | V | 1268 | T | 1 | 20210106 |
| EPI_ISL_800292 | Spike | hCoV-19/England/CAMC-D11B68/2020 | V | 1268 | Q | 1 | 20201226 |
| EPI_ISL_784985 | Spike | hCoV-19/USA/TX-HMH-MCoV-18637/2020 | K | 1269 | N | 3 (geo) | 20201121 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | K | 1269 | Y | 1 | 20200426 |
| EPI_ISL_605147 | Spike | hCoV-19/USA/PR-B2CY/2020 | K | 1269 | R | 2 (geo) | 20200802 |
| EPI_ISL_800292 | Spike | hCoV-19/England/CAMC-D11B68/2020 | K | 1269 | L | 1 | 20201226 |
| EPI_ISL_633474 | Spike | hCoV-19/England/QEUH-AE1C61/2020 | L | 1270 | S | 1 | 20201026 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | L | 1270 | D | 1 | 20200426 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | L | 1270 | I | 3 (geo) | 20200408 |
| EPI_ISL_856703 | Spike | hCoV-19/England/210141392/2021 | L | 1270 | M | 1 | 20210106 |
| EPI_ISL_476353 | Spike | hCoV-19/Brazil/SP-L20-CD419/2020 | H | 1271 | Y | 12 (geo) | 20200403 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | H | 1271 | Q | 1 | 20200426 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | Y | 1272 | L | 2 (geo) | 20200426 |
| EPI_ISL_587095 | Spike | hCoV-19/England/ALDP-A2ED29/2020 | Y | 1272 | H | 5 (geo) | 20201005 |
| EPI_ISL_846589 | Spike | hCoV-19/England/205160256/2020 | Y | 1272 | T | 1 | 20201217 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | Y | 1272 | F | 14 (geo) | 20200408 |
| EPI_ISL_719400 | Spike | hCoV-19/England/CAMC-C3F41F/2020 | Y | 1272 | Q | 1 | 20201210 |
| EPI_ISL_856703 | Spike | hCoV-19/England/210141392/2021 | Y | 1272 | K | 1 | 20210106 |
| EPI_ISL_415490 | Spike | hCoV-19/Netherlands/NA_33/2020 | T | 1273 | I | 23 (geo) | 20200307 |
| EPI_ISL_489446 | Spike | hCoV-19/England/CAMB-1AD505/2020 | T | 1273 | L | 2 (geo) | 20200426 |
| EPI_ISL_449114 | Spike | hCoV-19/England/NORW-E8156/2020 | T | 1273 | S | 7 (geo) | 20200408 |