The line chart above shows the average monthly frequency of aa changes in the Spike protein. Only aa changes that were present in more than 2 percent of circulating strains in any of the months were represented in the line chart. Please note that the frequency of aa changes in the most recent months tends to fluctuate as the database are still being populated. The chart will appear to be empty if there are no aa changes that met this threshold in the protein.
| Most_Recent_Accession | Protein | Isolate | WildtypeAA | Position | MutatedAA | #Occurrence | Date_of_collection(YYYYMMDD) |
|---|---|---|---|---|---|---|---|
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | 7 | 20230401 | |||
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1 | V | 1 | 20220210 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | A | 1 | I | 1 | 20230104 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 1 | F | 1 | 20210318 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | A | 1 | T | 1 | 20210420 |
| EPI_ISL_19639088 | NSP3 | hCoV-19/USA/MT-MTPHL-4163755/2024 | A | 1 | S | 219 | 20241121 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | P | 2 | N | 1 | 20230104 |
| EPI_ISL_19270794 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189706/2024 | P | 2 | T | 38 | 20240509 |
| EPI_ISL_19826760 | NSP3 | hCoV-19/USA/MN-MDH-46623/2025 | P | 2 | L | 2584 | 20250329 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 2 | C | 1 | 20220210 |
| EPI_ISL_18851043 | NSP3 | hCoV-19/New Zealand/24ZA0091/2023 | P | 2 | Q | 85 | 20231222 |
| EPI_ISL_6606342 | NSP3 | hCoV-19/France/ARA-HCL021201609401/2021 | P | 2 | A | 2 | 20211028 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | P | 2 | V | 1 | 20220210 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | P | 2 | Y | 1 | 20210420 |
| EPI_ISL_19459979 | NSP3 | hCoV-19/Canada/NS-NSH-734015/2024 | P | 2 | S | 421 | 20240913 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | P | 2 | D | 1 | 20210118 |
| EPI_ISL_19643497 | NSP3 | hCoV-19/USA/TX-HMH-M-146964/2024 | T | 3 | A | 700 | 20241205 |
| EPI_ISL_3756618 | NSP3 | hCoV-19/USA/ID-IBL-744670/2021 | T | 3 | insN | 1 | 20210719 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 3 | V | 2 | 20230104 |
| EPI_ISL_19270794 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189706/2024 | T | 3 | S | 4 | 20240509 |
| EPI_ISL_3883884 | NSP3 | hCoV-19/Japan/PG-75159/2021 | T | 3 | R | 1 | 20210708 |
| EPI_ISL_19745827 | NSP3 | hCoV-19/USA/NY-SUNYQB-X1334419/2025 | T | 3 | K | 38 | 20250203 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 3 | C | 1 | 20210318 |
| EPI_ISL_19825418 | NSP3 | hCoV-19/USA/NE-NPHL-RP252309/2025 | T | 3 | P | 62 | 20250311 |
| EPI_ISL_19784278 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12480-P0/2025 | T | 3 | I | 3226 | 20250210 |
| EPI_ISL_19491617 | NSP3 | hCoV-19/Japan/FR079-0104/2024 | K | 4 | T | 155 | 20240607 |
| EPI_ISL_19641414 | NSP3 | hCoV-19/USA/UT-UPHL-241230186752/2024 | K | 4 | Q | 49 | 20241211 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | K | 4 | V | 1 | 20210118 |
| EPI_ISL_19791164 | NSP3 | hCoV-19/Brazil/MS-FIOCRUZ-FMS715/2025 | K | 4 | R | 767 | 20250128 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 4 | S | 2 | 20230104 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 4 | Y | 1 | 20210318 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 4 | P | 1 | 20220210 |
| EPI_ISL_18913202 | NSP3 | hCoV-19/Ireland/D-BH-270035240/2024 | K | 4 | M | 114 | 20240210 |
| EPI_ISL_19764144 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56504/2025 | K | 4 | N | 1064 | 20250222 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | K | 4 | E | 75 | 20241226 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 4 | A | 2 | 20220210 |
| EPI_ISL_16304366 | NSP3 | hCoV-19/Japan/RIMD19689/2022 | K | 4 | stop | 3 | 20220826 |
| EPI_ISL_19535938 | NSP3 | hCoV-19/Germany/BE-ChVirD24-23087/2024 | V | 5 | L | 44 | 20241022 |
| EPI_ISL_4109611 | NSP3 | hCoV-19/Italy/CAM-RD20702686928/2021 | V | 5 | D | 3 | 20210823 |
| EPI_ISL_19469195 | NSP3 | hCoV-19/env/Ukraine/86427/2024 | V | 5 | A | 11 | 20240716 |
| EPI_ISL_4109602 | NSP3 | hCoV-19/Italy/CAM-RD20702687013/2021 | V | 5 | N | 1 | 20210825 |
| EPI_ISL_18797564 | NSP3 | hCoV-19/USA/MS-MSPHL-0045/2024 | V | 5 | G | 7 | 20240104 |
| EPI_ISL_19548916 | NSP3 | hCoV-19/Canada/AB-ABPHL-126369/2024 | V | 5 | F | 30 | 20241028 |
| EPI_ISL_463987 | NSP3 | hCoV-19/Canada/ON-MU-S49/2020 | V | 5 | T | 1 | 20200317 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | V | 5 | I | 1074 | 20241226 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | V | 5 | K | 3 | 20230104 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | V | 5 | C | 1 | 20210420 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 5 | M | 2 | 20220210 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | T | 6 | F | 2 | 20230412 |
| EPI_ISL_18619702 | NSP3 | hCoV-19/Ukraine/80338/2023 | T | 6 | L | 11 | 20230910 |
| EPI_ISL_18371097 | NSP3 | hCoV-19/Turkey/HSGM-AA00527/2023 | T | 6 | S | 64 | 20230825 |
| EPI_ISL_3033746 | NSP3 | hCoV-19/South Korea/KDCA6442/2021 | T | 6 | D | 1 | 20210630 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 6 | Y | 2 | 20230104 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | T | 6 | K | 2 | 20230217 |
| EPI_ISL_19270794 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189706/2024 | T | 6 | N | 80 | 20240509 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | T | 6 | C | 1 | 20210118 |
| EPI_ISL_19784745 | NSP3 | hCoV-19/Japan/FR021-0214/2025 | T | 6 | I | 1011 | 20250222 |
| EPI_ISL_19749653 | NSP3 | hCoV-19/USA/NJ-CDC-QDX31410812/2025 | T | 6 | A | 160 | 20250204 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 6 | H | 1 | 20210318 |
| EPI_ISL_15292382 | NSP3 | hCoV-19/India/MH-NCCS-P1162000201653/2021 | T | 6 | G | 1 | 20211221 |
| EPI_ISL_19799704 | NSP3 | hCoV-19/USA/TX-HMH-M-147686/2025 | T | 6 | del | 4 | 20250205 |
| EPI_ISL_19270794 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189706/2024 | F | 7 | V | 4 | 20240509 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | F | 7 | A | 1 | 20210118 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | F | 7 | E | 2 | 20220210 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 7 | K | 1 | 20220210 |
| EPI_ISL_15830955 | NSP3 | hCoV-19/Israel/SMC-7109407/2022 | F | 7 | C | 7 | 20221113 |
| EPI_ISL_19473847 | NSP3 | hCoV-19/South Korea/KDCA295896/2024 | F | 7 | L | 11 | 20240906 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | F | 7 | del | 3 | 20230401 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | F | 7 | I | 8 | 20230412 |
| EPI_ISL_17712806 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000184082SP/2022 | F | 7 | S | 3 | 20220728 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | F | 7 | stop | 1 | 20210809 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | F | 7 | G | 1 | 20230104 |
| EPI_ISL_2213025 | NSP3 | hCoV-19/Belgium/UZA-UA-CV2116823926/2021 | F | 7 | insA | 1 | 20210502 |
| EPI_ISL_13571476 | NSP3 | hCoV-19/South Korea/KDCA80842/2022 | F | 7 | Y | 5 | 20220605 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | F | 7 | insLE | 5 | 20241226 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | F | 7 | P | 1 | 20210803 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | G | 8 | Y | 1 | 20210809 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | G | 8 | Q | 1 | 20230104 |
| EPI_ISL_15139371 | NSP3 | hCoV-19/Croatia/42888/2022 | G | 8 | D | 31 | 20220908 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | G | 8 | I | 2 | 20230412 |
| EPI_ISL_16244244 | NSP3 | hCoV-19/Ecuador/USFQ-4535/2022 | G | 8 | A | 15 | 20221208 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | G | 8 | N | 1 | 20210420 |
| EPI_ISL_15292382 | NSP3 | hCoV-19/India/MH-NCCS-P1162000201653/2021 | G | 8 | F | 2 | 20211221 |
| EPI_ISL_4109602 | NSP3 | hCoV-19/Italy/CAM-RD20702687013/2021 | G | 8 | T | 1 | 20210825 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | G | 8 | insY | 1 | 20210805 |
| EPI_ISL_19334840 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143121/2024 | G | 8 | C | 116 | 20240720 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | G | 8 | del | 2 | 20230401 |
| EPI_ISL_18586862 | NSP3 | hCoV-19/Sweden/AB-01_SE100_23CS503428/2023 | G | 8 | V | 80 | 20231123 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 8 | R | 3 | 20220210 |
| EPI_ISL_15292730 | NSP3 | hCoV-19/India/GA-NCCS-3055200217819/2021 | G | 8 | W | 4 | 20211210 |
| EPI_ISL_3543445 | NSP3 | hCoV-19/USA/ID-IBL-642217/2020 | G | 8 | E | 1 | 20200812 |
| EPI_ISL_19756538 | NSP3 | hCoV-19/Russia/SPE-RII-MH223206S/2024 | G | 8 | S | 159 | 20241217 |
| EPI_ISL_11185283 | NSP3 | hCoV-19/England/BRBR-3A6FE4E/2022 | D | 9 | H | 7 | 20220312 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | D | 9 | C | 2 | 20220210 |
| EPI_ISL_19813274 | NSP3 | hCoV-19/Japan/FR050-0081/2025 | D | 9 | N | 366 | 20250310 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | D | 9 | L | 2 | 20210420 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | D | 9 | S | 1 | 20230217 |
| EPI_ISL_19435552 | NSP3 | hCoV-19/Sweden/T-23312879/2024 | D | 9 | A | 173 | 20240904 |
| EPI_ISL_19602830 | NSP3 | hCoV-19/Denmark/DCGC-690974/2024 | D | 9 | Y | 88 | 20241125 |
| EPI_ISL_17349567 | NSP3 | hCoV-19/India/KA-VRDL-34267/2023 | D | 9 | insIV | 21 | 20230315 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | D | 9 | del | 1 | 20230131 |
| EPI_ISL_18757936 | NSP3 | hCoV-19/Germany/BY-MVP-000023333/2023 | D | 9 | V | 42 | 20231211 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 9 | T | 1 | 20220210 |
| EPI_ISL_19824856 | NSP3 | hCoV-19/Spain/MD-H12O_035/2025 | D | 9 | G | 2282 | 20250327 |
| EPI_ISL_18667512 | NSP3 | hCoV-19/Australia/TAS006490/2023 | D | 9 | B | 10 | 20231214 |
| EPI_ISL_14367005 | NSP3 | hCoV-19/India/MH-NCCS-KinjalGoyal/2022 | D | 9 | M | 2 | 20220105 |
| EPI_ISL_19793812 | NSP3 | hCoV-19/Canada/AB-ABPHL-131406/2025 | D | 9 | E | 217 | 20250304 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | D | 10 | del | 3 | 20230131 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | D | 10 | T | 8 | 20241226 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 10 | K | 1 | 20210318 |
| EPI_ISL_15389073 | NSP3 | hCoV-19/Morocco/FMP440/2021 | D | 10 | L | 1 | 20211223 |
| EPI_ISL_18923216 | NSP3 | hCoV-19/USA/MS-MSPHL-0121/2024 | D | 10 | E | 59 | 20240206 |
| EPI_ISL_18256228 | NSP3 | hCoV-19/USA/TX-HMH-M-132593/2023 | D | 10 | H | 7 | 20230825 |
| EPI_ISL_19168884 | NSP3 | hCoV-19/USA/IL-C24WGS632/2024 | D | 10 | V | 29 | 20240422 |
| EPI_ISL_4109602 | NSP3 | hCoV-19/Italy/CAM-RD20702687013/2021 | D | 10 | insIY | 1 | 20210825 |
| EPI_ISL_19473373 | NSP3 | hCoV-19/USA/NY-CDC-QDX24342684/2024 | D | 10 | N | 601 | 20240927 |
| EPI_ISL_19457144 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-142358/2024 | D | 10 | Y | 975 | 20240921 |
| EPI_ISL_17236631 | NSP3 | hCoV-19/USA/NM-CDC-LC1024527/2023 | D | 10 | B | 12 | 20230225 |
| EPI_ISL_19768667 | NSP3 | hCoV-19/USA/DC-DFS-PHL-11441/2025 | D | 10 | G | 215 | 20250201 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | D | 10 | M | 1 | 20210801 |
| EPI_ISL_19474786 | NSP3 | hCoV-19/Russia/BA-RII-MH201524S/2024 | D | 10 | A | 69 | 20240905 |
| EPI_ISL_4109602 | NSP3 | hCoV-19/Italy/CAM-RD20702687013/2021 | D | 10 | R | 1 | 20210825 |
| EPI_ISL_18049749 | NSP3 | hCoV-19/Hubei/HCDC-SY2354/2023 | T | 11 | N | 81 | 20230713 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | T | 11 | D | 1 | 20230925 |
| EPI_ISL_10397189 | NSP3 | hCoV-19/Turkey/HSGM-G1518/2022 | T | 11 | F | 2 | 20220214 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 11 | P | 3 | 20220210 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | T | 11 | K | 1 | 20210420 |
| EPI_ISL_19454270 | NSP3 | hCoV-19/USA/NY-PRL-240923_81G05/2024 | T | 11 | A | 146 | 20240802 |
| EPI_ISL_14367005 | NSP3 | hCoV-19/India/MH-NCCS-KinjalGoyal/2022 | T | 11 | insstopstop | 1 | 20220105 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | T | 11 | C | 1 | 20230217 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | T | 11 | L | 7 | 20241226 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | T | 11 | del | 2 | 20230131 |
| EPI_ISL_19700704 | NSP3 | hCoV-19/Japan/FR019-0037/2024 | T | 11 | S | 13 | 20241213 |
| EPI_ISL_19795861 | NSP3 | hCoV-19/New Zealand/25YA0727/2025 | T | 11 | I | 438 | 20250311 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | T | 11 | V | 1 | 20210118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 11 | E | 4 | 20220210 |
| EPI_ISL_18868614 | NSP3 | hCoV-19/USA/CA-HLX-STM-MZ4MRC7BB/2024 | V | 12 | M | 212 | 20240109 |
| EPI_ISL_18098348 | NSP3 | hCoV-19/Kenya/KNPHLGEN128/2021 | V | 12 | R | 2 | 20211218 |
| EPI_ISL_15389073 | NSP3 | hCoV-19/Morocco/FMP440/2021 | V | 12 | F | 3 | 20211223 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | V | 12 | D | 1 | 20210420 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | V | 12 | insstopstop | 1 | 20210801 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | V | 12 | del | 3 | 20230131 |
| EPI_ISL_14718232 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19515/2022 | V | 12 | G | 5 | 20220805 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | V | 12 | P | 5 | 20241226 |
| EPI_ISL_16327669 | NSP3 | hCoV-19/Shanghai/SJTU-237176/2022 | V | 12 | E | 11 | 20221209 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | V | 12 | N | 1 | 20230412 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | V | 12 | stop | 1 | 20210121 |
| EPI_ISL_19637632 | NSP3 | hCoV-19/Russia/SPE-RII-MH214259S/2024 | V | 12 | L | 109 | 20241114 |
| EPI_ISL_11355271 | NSP3 | hCoV-19/France/GES-ChNa-210065730301/2021 | V | 12 | C | 1 | 20210814 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | V | 12 | K | 3 | 20230412 |
| EPI_ISL_17563265 | NSP3 | hCoV-19/South Korea/KDCA230062/2023 | V | 12 | A | 31 | 20230404 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | I | 13 | Y | 1 | 20230412 |
| EPI_ISL_463987 | NSP3 | hCoV-19/Canada/ON-MU-S49/2020 | I | 13 | A | 1 | 20200317 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 13 | H | 1 | 20220210 |
| EPI_ISL_18006123 | NSP3 | hCoV-19/Hubei/HCDC-2287/2023 | I | 13 | R | 5 | 20230703 |
| EPI_ISL_11930971 | NSP3 | hCoV-19/England/DHSC-CYBMGFP/2022 | I | 13 | stop | 4 | 20220219 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | I | 13 | T | 96 | 20241226 |
| EPI_ISL_16764057 | NSP3 | hCoV-19/USA/NM-NMDOH-2022149986/2022 | I | 13 | M | 79 | 20221127 |
| EPI_ISL_11355271 | NSP3 | hCoV-19/France/GES-ChNa-210065730301/2021 | I | 13 | E | 1 | 20210814 |
| EPI_ISL_7790291 | NSP3 | hCoV-19/USA/NY-CDC-ASC210488507/2021 | I | 13 | K | 6 | 20211121 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 13 | G | 1 | 20210318 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | I | 13 | C | 3 | 20230414 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | I | 13 | del | 3 | 20230131 |
| EPI_ISL_19181090 | NSP3 | hCoV-19/Singapore/R31MQ96/2024 | I | 13 | J | 4 | 20240523 |
| EPI_ISL_19702369 | NSP3 | hCoV-19/Canada/ON-PHL-202502869/2025 | I | 13 | V | 1188 | 20250127 |
| EPI_ISL_19612056 | NSP3 | hCoV-19/USA/CA-CDPH-500140394/2024 | I | 13 | L | 69 | 20240707 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | E | 14 | R | 1 | 20210420 |
| EPI_ISL_19705497 | NSP3 | hCoV-19/USA/MS-MSPHL-0004/2025 | E | 14 | G | 88 | 20250113 |
| EPI_ISL_18526203 | NSP3 | hCoV-19/Germany/BY-MVP-000021640/2023 | E | 14 | Q | 13 | 20231005 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | E | 14 | del | 4 | 20230131 |
| EPI_ISL_5384434 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-49654/2020 | E | 14 | Y | 1 | 20200713 |
| EPI_ISL_19376943 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-025705/2024 | E | 14 | K | 187 | 20240510 |
| EPI_ISL_19192503 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16019/2024 | E | 14 | S | 5 | 20240322 |
| EPI_ISL_15389073 | NSP3 | hCoV-19/Morocco/FMP440/2021 | E | 14 | I | 4 | 20211223 |
| EPI_ISL_14495332 | NSP3 | hCoV-19/India/KA-SLS36083/2022 | E | 14 | stop | 6 | 20220512 |
| EPI_ISL_18566910 | NSP3 | hCoV-19/Japan/PG-583506/2023 | E | 14 | V | 15 | 20231024 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 14 | L | 2 | 20230420 |
| EPI_ISL_16456651 | NSP3 | hCoV-19/England/BRBR-32685BA9/2023 | E | 14 | Z | 16 | 20230102 |
| EPI_ISL_19676741 | NSP3 | hCoV-19/Australia/QLD0x01507F/2025 | E | 14 | A | 89 | 20250101 |
| EPI_ISL_17769916 | NSP3 | hCoV-19/Qinghai/QHCDC-HD1Y-17/2023 | E | 14 | D | 70 | 20230515 |
| EPI_ISL_12409313 | NSP3 | hCoV-19/France/BFC-HMN-22032240244/2022 | V | 15 | G | 4 | 20220228 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 15 | D | 2 | 20230412 |
| EPI_ISL_19532860 | NSP3 | hCoV-19/Canada/AB-ABPHL-126197/2024 | V | 15 | L | 91 | 20241025 |
| EPI_ISL_15389073 | NSP3 | hCoV-19/Morocco/FMP440/2021 | V | 15 | N | 3 | 20211223 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | V | 15 | del | 5 | 20230131 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | V | 15 | K | 1 | 20230412 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | V | 15 | I | 3 | 20230217 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | V | 15 | Q | 1 | 20230412 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 15 | R | 2 | 20220210 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | V | 15 | P | 1 | 20230420 |
| EPI_ISL_18493003 | NSP3 | hCoV-19/Canada/AB-ABPHL-106485/2023 | V | 15 | M | 49 | 20231019 |
| EPI_ISL_17592073 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3035/2023 | V | 15 | C | 5 | 20230408 |
| EPI_ISL_19443655 | NSP3 | hCoV-19/South Korea/KDCA295764/2024 | V | 15 | A | 26 | 20240902 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | V | 15 | E | 5 | 20230414 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Q | 16 | G | 1 | 20230104 |
| EPI_ISL_19339705 | NSP3 | hCoV-19/Italy/LAZ-INMI-6575/2024 | Q | 16 | R | 150 | 20240630 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | Q | 16 | A | 2 | 20230412 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 16 | M | 1 | 20220210 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | Q | 16 | D | 2 | 20210420 |
| EPI_ISL_19784183 | NSP3 | hCoV-19/USA/DC-CDC-LC1134525/2025 | Q | 16 | L | 85 | 20250307 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | Q | 16 | Y | 1 | 20230412 |
| EPI_ISL_18914972 | NSP3 | hCoV-19/env/Ukraine/80863/2023 | Q | 16 | E | 9 | 20231012 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Q | 16 | T | 1 | 20220210 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | Q | 16 | N | 1 | 20230414 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Q | 16 | S | 1 | 20230420 |
| EPI_ISL_16640684 | NSP3 | hCoV-19/Sweden/01_SE100_23CS500347/2023 | Q | 16 | H | 37 | 20230105 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | Q | 16 | V | 5 | 20230412 |
| EPI_ISL_17790209 | NSP3 | hCoV-19/Singapore/R38MR76/2023 | Q | 16 | Z | 2 | 20230531 |
| EPI_ISL_18643599 | NSP3 | hCoV-19/USA/AZ-CDC-QDX88322159/2023 | Q | 16 | P | 18 | 20231129 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | Q | 16 | del | 4 | 20230131 |
| EPI_ISL_17592073 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3035/2023 | Q | 16 | K | 36 | 20230408 |
| EPI_ISL_15153788 | NSP3 | hCoV-19/Austria/LB-R00103-S015/2022 | Q | 16 | stop | 6 | 20220919 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | G | 17 | F | 3 | 20230104 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | G | 17 | T | 5 | 20241226 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | G | 17 | I | 1 | 20230420 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | G | 17 | R | 5 | 20230412 |
| EPI_ISL_18098349 | NSP3 | hCoV-19/Kenya/KNPHLGEN125/2022 | G | 17 | insCQECE | 1 | 20221223 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | G | 17 | E | 3 | 20230412 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | G | 17 | L | 2 | 20230414 |
| EPI_ISL_19702192 | NSP3 | hCoV-19/Canada/ON-PHL-202502670/2025 | G | 17 | C | 259 | 20250122 |
| EPI_ISL_19363557 | NSP3 | hCoV-19/Japan/FR062-0411/2024 | G | 17 | S | 230 | 20240820 |
| EPI_ISL_18972175 | NSP3 | hCoV-19/Singapore/R15MQ3/2024 | G | 17 | D | 12 | 20240229 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | G | 17 | del | 6 | 20230401 |
| EPI_ISL_18074415 | NSP3 | hCoV-19/Shanghai/SCDC-HG0727-2793/2023 | G | 17 | A | 7 | 20230725 |
| EPI_ISL_19749312 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00022533_01/2024 | G | 17 | V | 66 | 20241230 |
| EPI_ISL_19348699 | NSP3 | hCoV-19/Morocco/25/2020 | G | 17 | Q | 1 | 20200923 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | Y | 18 | I | 1 | 20230412 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | Y | 18 | G | 1 | 20230217 |
| EPI_ISL_17592073 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3035/2023 | Y | 18 | T | 6 | 20230408 |
| EPI_ISL_19343634 | NSP3 | hCoV-19/Canada/ON-PHL-202411267-v2/2024 | Y | 18 | N | 17 | 20240805 |
| EPI_ISL_12146148 | NSP3 | hCoV-19/Turkey/HSGM-GS1667/2022 | Y | 18 | stop | 51 | 20220401 |
| EPI_ISL_19391071 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-105724/2024 | Y | 18 | C | 302 | 20240812 |
| EPI_ISL_19555484 | NSP3 | hCoV-19/USA/MN-MDH-44134/2024 | Y | 18 | H | 176 | 20241031 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | Y | 18 | del | 3 | 20230131 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 18 | R | 1 | 20220210 |
| EPI_ISL_11298004 | NSP3 | hCoV-19/Brazil/CE-REDE-L1BC03LACE/2022 | Y | 18 | S | 2 | 20220203 |
| EPI_ISL_17953316 | NSP3 | hCoV-19/Thailand/NIC_NBI_6441/2023 | Y | 18 | F | 9 | 20230611 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | Y | 18 | Q | 1 | 20230412 |
| EPI_ISL_15389073 | NSP3 | hCoV-19/Morocco/FMP440/2021 | Y | 18 | K | 4 | 20211223 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | Y | 18 | V | 1 | 20230414 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | Y | 18 | E | 7 | 20241226 |
| EPI_ISL_12152766 | NSP3 | hCoV-19/Russia/TAM-CRIE-S_7720153318/2022 | Y | 18 | D | 3 | 20220112 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | Y | 18 | L | 7 | 20230412 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | K | 19 | Q | 10 | 20230412 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | K | 19 | del | 50 | 20230131 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | K | 19 | V | 3 | 20230412 |
| EPI_ISL_15389073 | NSP3 | hCoV-19/Morocco/FMP440/2021 | K | 19 | Y | 5 | 20211223 |
| EPI_ISL_19533986 | NSP3 | hCoV-19/USA/CO-CDPHE-42384580/2024 | K | 19 | N | 467 | 20241012 |
| EPI_ISL_17784442 | NSP3 | hCoV-19/Australia/NSW-ICPMR-47742/2023 | K | 19 | T | 267 | 20230530 |
| EPI_ISL_15465232 | NSP3 | hCoV-19/USA/NY-URMC-22099594-1/2022 | K | 19 | M | 21 | 20220927 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | K | 19 | F | 1 | 20210420 |
| EPI_ISL_18098349 | NSP3 | hCoV-19/Kenya/KNPHLGEN125/2022 | K | 19 | H | 1 | 20221223 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | K | 19 | S | 7 | 20230420 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 19 | L | 1 | 20220210 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | K | 19 | E | 27 | 20241226 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 19 | A | 1 | 20220210 |
| EPI_ISL_19563598 | NSP3 | hCoV-19/Netherlands/NH-RIVM-144082/2024 | K | 19 | R | 733 | 20241104 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | S | 20 | H | 1 | 20220210 |
| EPI_ISL_19675720 | NSP3 | hCoV-19/Canada/ON-PHL-202501261/2025 | S | 20 | G | 286 | 20250107 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 20 | Y | 1 | 20210318 |
| EPI_ISL_17045180 | NSP3 | hCoV-19/Japan/PG-449062/2023 | S | 20 | R | 49 | 20230121 |
| EPI_ISL_19795257 | NSP3 | hCoV-19/USA/NY-CDC-LC1135329/2025 | S | 20 | I | 381 | 20250311 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | S | 20 | D | 2 | 20230414 |
| EPI_ISL_3214969 | NSP3 | hCoV-19/USA/SC-DGL-1676016/2021 | S | 20 | M | 1 | 20210715 |
| EPI_ISL_17592073 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3035/2023 | S | 20 | del | 5 | 20230408 |
| EPI_ISL_18987891 | NSP3 | hCoV-19/env/Germany/BY-LGL-6166843/2024 | S | 20 | K | 3 | 20240221 |
| EPI_ISL_19641664 | NSP3 | hCoV-19/USA/CA-PFZ00683/2024 | S | 20 | C | 64 | 20241109 |
| EPI_ISL_19131304 | NSP3 | hCoV-19/env/Ukraine/83582/2023 | S | 20 | T | 15 | 20231211 |
| EPI_ISL_19823362 | NSP3 | hCoV-19/USA/NY-SUNYQB-X1147385/2025 | S | 20 | N | 427 | 20250329 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | S | 20 | A | 1 | 20210118 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | S | 20 | E | 10 | 20230412 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | S | 20 | V | 6 | 20241226 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | S | 20 | insstop | 2 | 20210803 |
| EPI_ISL_18987891 | NSP3 | hCoV-19/env/Germany/BY-LGL-6166843/2024 | V | 21 | stop | 4 | 20240221 |
| EPI_ISL_15576448 | NSP3 | hCoV-19/Japan/TKYkbm54231/2022 | V | 21 | A | 100 | 20220920 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | V | 21 | S | 1 | 20210118 |
| EPI_ISL_19109979 | NSP3 | hCoV-19/Mexico/VER_InDRE_FB585/2024 | V | 21 | L | 143 | 20240216 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 21 | C | 7 | 20230412 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | V | 21 | N | 1 | 20210918 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 21 | W | 1 | 20220210 |
| EPI_ISL_16410072 | NSP3 | hCoV-19/Denmark/DCGC-633808/2022 | V | 21 | M | 434 | 20221228 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | V | 21 | I | 9 | 20230420 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | V | 21 | E | 6 | 20230925 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | V | 21 | del | 4 | 20230217 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | V | 21 | T | 2 | 20230104 |
| EPI_ISL_13988944 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-3156/2022 | V | 21 | K | 1 | 20220630 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | V | 21 | Q | 4 | 20230412 |
| EPI_ISL_955141 | NSP3 | hCoV-19/Belgium/UZA-UA-6296/2021 | V | 21 | G | 1 | 20210118 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | N | 22 | V | 4 | 20230412 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | N | 22 | C | 1 | 20210118 |
| EPI_ISL_19827269 | NSP3 | hCoV-19/Chile/MA-ISPC-22732/2025 | N | 22 | T | 129 | 20250314 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | N | 22 | L | 8 | 20241226 |
| EPI_ISL_17592073 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3035/2023 | N | 22 | stop | 1 | 20230408 |
| EPI_ISL_18590479 | NSP3 | hCoV-19/Singapore/R83MR160/2023 | N | 22 | B | 11 | 20231111 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | N | 22 | del | 5 | 20230403 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | N | 22 | E | 10 | 20230412 |
| EPI_ISL_18076091 | NSP3 | hCoV-19/France/IDF-IPP16259/2023 | N | 22 | Y | 28 | 20230710 |
| EPI_ISL_19713915 | NSP3 | hCoV-19/Russia/SPE-RII-MH223833S/2025 | N | 22 | I | 30 | 20250116 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | N | 22 | P | 1 | 20230104 |
| EPI_ISL_19135309 | NSP3 | hCoV-19/Japan/FR025-0081/2024 | N | 22 | H | 116 | 20240308 |
| EPI_ISL_18872351 | NSP3 | hCoV-19/USA/MS-MSPHL-0104/2024 | N | 22 | K | 29 | 20240130 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | N | 22 | R | 2 | 20230414 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 22 | A | 1 | 20210318 |
| EPI_ISL_19763975 | NSP3 | hCoV-19/Japan/FR015-0025/2025 | N | 22 | D | 215 | 20250131 |
| EPI_ISL_19694876 | NSP3 | hCoV-19/Japan/FR034-0008/2025 | N | 22 | S | 1244 | 20250111 |
| EPI_ISL_18468739 | NSP3 | hCoV-19/Bulgaria/2144/2022 | I | 23 | stop | 1 | 20221110 |
| EPI_ISL_19537739 | NSP3 | hCoV-19/Italy/LOM-UniMI108/2022 | I | 23 | F | 5 | 20221104 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | I | 23 | Y | 14 | 20230412 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | I | 23 | insstopTstopstopKDstopstopS | 1 | 20210803 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | I | 23 | A | 1 | 20230104 |
| EPI_ISL_18697965 | NSP3 | hCoV-19/Ukraine/82845/2023 | I | 23 | L | 34 | 20231119 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | I | 23 | del | 4 | 20230403 |
| EPI_ISL_13847357 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2942/2022 | I | 23 | N | 2 | 20220630 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | I | 23 | S | 5 | 20230420 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | I | 23 | E | 4 | 20230414 |
| EPI_ISL_18927953 | NSP3 | hCoV-19/USA/TX-HMH-M-138749/2024 | I | 23 | R | 2 | 20240201 |
| EPI_ISL_17815888 | NSP3 | hCoV-19/Singapore/R41MR135/2023 | I | 23 | T | 51 | 20230612 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | I | 23 | K | 6 | 20241226 |
| EPI_ISL_18822167 | NSP3 | hCoV-19/Spain/CT-IrsiCaixaAF3G3/2021 | I | 23 | J | 1 | 20210728 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | I | 23 | C | 1 | 20230217 |
| EPI_ISL_15282806 | NSP3 | hCoV-19/Italy/SIC-CQRC-3422057388/2022 | I | 23 | M | 26 | 20220820 |
| EPI_ISL_19743427 | NSP3 | hCoV-19/USA/NE-RP251505/2025 | I | 23 | V | 4990 | 20250205 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | T | 24 | E | 3 | 20230217 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | T | 24 | insRVstopISL | 1 | 20210801 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | T | 24 | stop | 1 | 20210730 |
| EPI_ISL_19782563 | NSP3 | hCoV-19/USA/MI-UM-10062023658/2025 | T | 24 | V | 119 | 20250127 |
| EPI_ISL_19519880 | NSP3 | hCoV-19/Canada/BC-BCCDC-742139/2024 | T | 24 | L | 14 | 20241004 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | T | 24 | del | 8 | 20230403 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | T | 24 | insP | 1 | 20200721 |
| EPI_ISL_11359809 | NSP3 | hCoV-19/USA/KS-KSU-0766/2022 | T | 24 | P | 3 | 20220112 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | T | 24 | H | 14 | 20230412 |
| EPI_ISL_19165694 | NSP3 | hCoV-19/Brazil/DF-LACENDF-530104987/2024 | T | 24 | N | 247 | 20240311 |
| EPI_ISL_19833200 | NSP3 | hCoV-19/Poland/Kce-46/2025 | T | 24 | I | 4254664 | 20250411 |
| EPI_ISL_18514553 | NSP3 | hCoV-19/England/CLIMB-CM7YF1NG/2023 | T | 24 | M | 2 | 20231105 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | T | 24 | D | 1 | 20230414 |
| EPI_ISL_19630142 | NSP3 | hCoV-19/USA/NY-URMC-P2S1T200-1/2024 | T | 24 | S | 34 | 20241202 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | T | 24 | A | 74 | 20230410 |
| EPI_ISL_19408685 | NSP3 | hCoV-19/Italy/LOM-UNIBS-09059714/2024 | T | 24 | F | 307 | 20240831 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | F | 25 | del | 7 | 20230403 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | F | 25 | S | 4 | 20230420 |
| EPI_ISL_19751841 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00056/2022 | F | 25 | stop | 2 | 20220108 |
| EPI_ISL_18107390 | NSP3 | hCoV-19/USA/AZ-ASU104367/2023 | F | 25 | V | 4 | 20230807 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | F | 25 | R | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 25 | W | 1 | 20210318 |
| EPI_ISL_18115486 | NSP3 | hCoV-19/Thailand/NIC_BKK_6915/2023 | F | 25 | insF | 1 | 20230628 |
| EPI_ISL_18098343 | NSP3 | hCoV-19/Kenya/KNPHLGEN129/2022 | F | 25 | insL | 2 | 20221218 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | F | 25 | T | 3 | 20210730 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | F | 25 | G | 6 | 20241226 |
| EPI_ISL_3242922 | NSP3 | hCoV-19/USA/ID-IBL-640883/2020 | F | 25 | P | 1 | 20200809 |
| EPI_ISL_19825250 | NSP3 | hCoV-19/USA/NY-NYULH-22529/2025 | F | 25 | Y | 105 | 20250403 |
| EPI_ISL_15486814 | NSP3 | hCoV-19/Israel/ICH-741189387/2022 | F | 25 | N | 3 | 20221011 |
| EPI_ISL_18927953 | NSP3 | hCoV-19/USA/TX-HMH-M-138749/2024 | F | 25 | I | 6 | 20240201 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | F | 25 | insstopTstopstopK | 1 | 20210918 |
| EPI_ISL_19706258 | NSP3 | hCoV-19/Japan/FR012-0009/2025 | F | 25 | L | 1162 | 20250121 |
| EPI_ISL_19270794 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189706/2024 | F | 25 | C | 2 | 20240509 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | F | 25 | K | 3 | 20230217 |
| EPI_ISL_19706258 | NSP3 | hCoV-19/Japan/FR012-0009/2025 | E | 26 | N | 1148 | 20250121 |
| EPI_ISL_19166545 | NSP3 | hCoV-19/USA/NY-IVY-G43S08I7/2024 | E | 26 | A | 84 | 20240311 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 26 | L | 3 | 20220210 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | E | 26 | Y | 1 | 20210420 |
| EPI_ISL_19046166 | NSP3 | hCoV-19/South Korea/KDCA290039/2024 | E | 26 | G | 272 | 20240313 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | E | 26 | C | 1 | 20230410 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 26 | F | 1 | 20230420 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | E | 26 | del | 7 | 20230403 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | E | 26 | D | 78 | 20241226 |
| EPI_ISL_18365087 | NSP3 | hCoV-19/Mexico/CMX_LANGEBIO_IMSS_15312/2023 | E | 26 | V | 25 | 20230522 |
| EPI_ISL_16490796 | NSP3 | hCoV-19/USA/NY-NYCPHL-016271/2022 | E | 26 | Q | 6 | 20221215 |
| EPI_ISL_13971617 | NSP3 | hCoV-19/Denmark/DCGC-549962/2022 | E | 26 | Z | 8 | 20220713 |
| EPI_ISL_15106342 | NSP3 | hCoV-19/USA/NY-PRL-220919_00L18/2022 | E | 26 | H | 1 | 20220915 |
| EPI_ISL_19554269 | NSP3 | hCoV-19/USA/NY-PRL-241105_81G11/2024 | E | 26 | K | 167 | 20241029 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | E | 26 | T | 4 | 20221226 |
| EPI_ISL_14805520 | NSP3 | hCoV-19/USA/CA-CDPH-500073573/2022 | E | 26 | stop | 19 | 20220802 |
| EPI_ISL_15389073 | NSP3 | hCoV-19/Morocco/FMP440/2021 | E | 26 | S | 2 | 20211223 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | L | 27 | T | 4 | 20220727 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | L | 27 | Y | 1 | 20230420 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 27 | N | 2 | 20220210 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | L | 27 | stop | 3 | 20210918 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | L | 27 | del | 12 | 20230403 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 27 | D | 1 | 20210318 |
| EPI_ISL_3475279 | NSP3 | hCoV-19/France/BFC-HMN-21072290276/2021 | L | 27 | H | 1 | 20210719 |
| EPI_ISL_17722808 | NSP3 | hCoV-19/Poland/SNR477_wsserze/2023 | L | 27 | P | 7 | 20230316 |
| EPI_ISL_13360728 | NSP3 | hCoV-19/Belgium/rega-42520/2022 | L | 27 | V | 14 | 20220516 |
| EPI_ISL_13129879 | NSP3 | hCoV-19/Scotland/LSPA-3E3A7D4/2022 | L | 27 | J | 8 | 20220531 |
| EPI_ISL_19441139 | NSP3 | hCoV-19/France/IDF-RELAB-IPP10369/2024 | L | 27 | F | 166 | 20240906 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | L | 27 | K | 1 | 20230410 |
| EPI_ISL_18301815 | NSP3 | hCoV-19/Italy/LOM-69468829/2023 | L | 27 | R | 907 | 20230914 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | L | 27 | G | 2 | 20210420 |
| EPI_ISL_19334797 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143212/2024 | L | 27 | I | 154 | 20240719 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | D | 28 | del | 18 | 20230403 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | D | 28 | W | 1 | 20220210 |
| EPI_ISL_19831374 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56873/2025 | D | 28 | E | 81 | 20250310 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | D | 28 | K | 4 | 20230217 |
| EPI_ISL_19706258 | NSP3 | hCoV-19/Japan/FR012-0009/2025 | D | 28 | M | 1152 | 20250121 |
| EPI_ISL_11131770 | NSP3 | hCoV-19/Scotland/QEUH-398E69D/2022 | D | 28 | A | 11 | 20220307 |
| EPI_ISL_16998980 | NSP3 | hCoV-19/USA/MN-MDH-34088/2023 | D | 28 | H | 4 | 20230206 |
| EPI_ISL_19573116 | NSP3 | hCoV-19/Italy/EMR-IZSLER-346706-006-01/2024 | D | 28 | B | 9 | 20241021 |
| EPI_ISL_7864134 | NSP3 | hCoV-19/England/QEUH-2E66C79/2021 | D | 28 | G | 9 | 20211208 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | D | 28 | R | 1 | 20210805 |
| EPI_ISL_5348886 | NSP3 | hCoV-19/USA/AZ-ASPHL-5353/2021 | D | 28 | stop | 4 | 20211006 |
| EPI_ISL_11047422 | NSP3 | hCoV-19/France/PDL-IPP14457/2022 | D | 28 | C | 2 | 20220221 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 28 | L | 1 | 20210318 |
| EPI_ISL_19462162 | NSP3 | hCoV-19/Denmark/DCGC-689191/2024 | D | 28 | N | 241 | 20240916 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | D | 28 | T | 1 | 20230414 |
| EPI_ISL_12934145 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-092321-1412/2021 | D | 28 | V | 1 | 20210923 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | D | 28 | Q | 4 | 20241226 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | D | 28 | S | 1 | 20230217 |
| EPI_ISL_17279811 | NSP3 | hCoV-19/USA/NY-UB-CHS-06218/2022 | D | 28 | Y | 171 | 20221220 |
| EPI_ISL_12934299 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010322-1519/2022 | D | 28 | I | 1 | 20220103 |
| EPI_ISL_19820872 | NSP3 | hCoV-19/Guatemala/018-DLNS/2025 | E | 29 | G | 391 | 20250306 |
| EPI_ISL_19585885 | NSP3 | hCoV-19/USA/NY-URMC-O8S1S459-1/2024 | E | 29 | V | 28 | 20240818 |
| EPI_ISL_12583838 | NSP3 | hCoV-19/Turkey/HSGM-GS2767/2022 | E | 29 | R | 1 | 20220407 |
| EPI_ISL_11925821 | NSP3 | hCoV-19/England/DHSC-CYB6N6Z/2022 | E | 29 | stop | 7 | 20220109 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | E | 29 | insLEQP | 2 | 20241226 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | E | 29 | Q | 92 | 20231007 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | E | 29 | del | 13 | 20230403 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | E | 29 | M | 1 | 20220120 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | E | 29 | I | 2 | 20230414 |
| EPI_ISL_19093553 | NSP3 | hCoV-19/Wales/CLIMB-CM7YRI8D/2024 | E | 29 | Z | 9 | 20240415 |
| EPI_ISL_18816393 | NSP3 | hCoV-19/USA/TX-HMH-M-137692/2024 | E | 29 | A | 151 | 20240110 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 29 | S | 3 | 20220210 |
| EPI_ISL_19348699 | NSP3 | hCoV-19/Morocco/25/2020 | E | 29 | F | 1 | 20200923 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | E | 29 | insGstopstopI | 1 | 20220916 |
| EPI_ISL_19732565 | NSP3 | hCoV-19/Canada/ON-PHL-202503311/2025 | E | 29 | K | 1410 | 20250201 |
| EPI_ISL_19130315 | NSP3 | hCoV-19/South Korea/KDCA292469/2024 | E | 29 | D | 351 | 20240415 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | E | 29 | N | 2 | 20230410 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | E | 29 | P | 2 | 20241226 |
| EPI_ISL_19768150 | NSP3 | hCoV-19/France/ARA-RELAB-HCL725000032701/2025 | R | 30 | K | 681 | 20250213 |
| EPI_ISL_19369584 | NSP3 | hCoV-19/Hong Kong/HKU-G047/2024 | R | 30 | W | 11 | 20240806 |
| EPI_ISL_19555153 | NSP3 | hCoV-19/Ukraine/89051/2024 | R | 30 | S | 874 | 20241014 |
| EPI_ISL_12934299 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010322-1519/2022 | R | 30 | Y | 1 | 20220103 |
| EPI_ISL_16886673 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K052300/2023 | R | 30 | E | 2 | 20230131 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | R | 30 | N | 1 | 20230414 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | R | 30 | Q | 1 | 20230217 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | R | 30 | L | 3 | 20230410 |
| EPI_ISL_19351815 | NSP3 | hCoV-19/Ireland/LK-UHL-688681/2024 | R | 30 | M | 405 | 20240801 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | R | 30 | del | 14 | 20230403 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | R | 30 | P | 3 | 20221229 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | R | 30 | A | 1 | 20210807 |
| EPI_ISL_19706258 | NSP3 | hCoV-19/Japan/FR012-0009/2025 | R | 30 | G | 1227 | 20250121 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | R | 30 | V | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | R | 30 | I | 3 | 20210318 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | R | 30 | stop | 1 | 20210730 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | R | 30 | C | 1 | 20210424 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | R | 30 | T | 7 | 20241226 |
| EPI_ISL_19732411 | NSP3 | hCoV-19/Canada/ON-PHL-202503143/2025 | I | 31 | V | 2004 | 20250128 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | I | 31 | A | 1 | 20230420 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | I | 31 | L | 1283 | 20250312 |
| EPI_ISL_8501175 | NSP3 | hCoV-19/USA/KS-KSU-6864/2021 | I | 31 | N | 3 | 20211206 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | I | 31 | D | 4 | 20211228 |
| EPI_ISL_12584118 | NSP3 | hCoV-19/Turkey/HSGM-G8661/2022 | I | 31 | T | 24 | 20220407 |
| EPI_ISL_11101741 | NSP3 | hCoV-19/env/USA/CA-SEARCH-73089/2022 | I | 31 | M | 5 | 20220202 |
| EPI_ISL_14588245 | NSP3 | hCoV-19/USA/ID-IBL-843831/2022 | I | 31 | stop | 4 | 20220731 |
| EPI_ISL_16886673 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K052300/2023 | I | 31 | C | 1 | 20230131 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | I | 31 | del | 14 | 20230403 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 31 | E | 2 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 31 | G | 1 | 20210318 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | I | 31 | K | 1 | 20210424 |
| EPI_ISL_995823 | NSP3 | hCoV-19/South Korea/KDCA1278/2021 | I | 31 | R | 2 | 20210119 |
| EPI_ISL_9201403 | NSP3 | hCoV-19/South Africa/NICD-N24060/2021 | I | 31 | F | 19 | 20211207 |
| EPI_ISL_19270794 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189706/2024 | I | 31 | J | 4 | 20240509 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | I | 31 | Q | 1 | 20210428 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | I | 31 | S | 4 | 20241226 |
| EPI_ISL_12934299 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010322-1519/2022 | D | 32 | M | 1 | 20220103 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | D | 32 | del | 14 | 20230403 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | D | 32 | W | 1 | 20210118 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | D | 32 | Q | 2 | 20230217 |
| EPI_ISL_19379402 | NSP3 | hCoV-19/USA/FL-CDC-LC1115986/2024 | D | 32 | N | 455 | 20240819 |
| EPI_ISL_14392802 | NSP3 | hCoV-19/India/GA-NCCS-C77123/2021 | D | 32 | T | 1 | 20211009 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | D | 32 | G | 6 | 20230420 |
| EPI_ISL_8455416 | NSP3 | hCoV-19/England/BRBR-303FEE7/2021 | D | 32 | Y | 2 | 20211228 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | D | 32 | K | 4 | 20230410 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 32 | L | 1 | 20210318 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | D | 32 | E | 12 | 20241226 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | D | 32 | I | 1164 | 20250312 |
| EPI_ISL_17598863 | NSP3 | hCoV-19/England/PHEC-YYEIPWZ/2023 | D | 32 | B | 293 | 20230412 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | D | 32 | C | 1 | 20211228 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | D | 32 | R | 2 | 20230217 |
| EPI_ISL_14588245 | NSP3 | hCoV-19/USA/ID-IBL-843831/2022 | D | 32 | stop | 6 | 20220731 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | D | 32 | S | 3 | 20230414 |
| EPI_ISL_14392278 | NSP3 | hCoV-19/Finland/SYN-7583/2022 | D | 32 | H | 7 | 20220714 |
| EPI_ISL_19366170 | NSP3 | hCoV-19/USA/TX-HMH-M-144797/2024 | D | 32 | V | 4 | 20240815 |
| EPI_ISL_14302955 | NSP3 | hCoV-19/Finland/VI-7518/2022 | D | 32 | A | 11 | 20220707 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | K | 33 | insFFKLC | 1 | 20230217 |
| EPI_ISL_17715091 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-81/2023 | K | 33 | S | 4 | 20230424 |
| EPI_ISL_19621579 | NSP3 | hCoV-19/France/PAC-RELAB-HCL024191557501/2024 | K | 33 | N | 225 | 20241126 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | K | 33 | H | 3 | 20230217 |
| EPI_ISL_19578636 | NSP3 | hCoV-19/Germany/BB-ChVirD24-23124/2024 | K | 33 | E | 1226 | 20241119 |
| EPI_ISL_16919803 | NSP3 | hCoV-19/USA/TX-HMH-M-124417/2023 | K | 33 | Y | 2 | 20230129 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 33 | P | 1 | 20210318 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | K | 33 | L | 3 | 20230420 |
| EPI_ISL_3393801 | NSP3 | hCoV-19/France/OCC-CHU-TLS-210201526601/2021 | K | 33 | G | 2 | 20210120 |
| EPI_ISL_7547077 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081721-1058/2021 | K | 33 | stop | 3 | 20210817 |
| EPI_ISL_19141786 | NSP3 | hCoV-19/Canada/BC-BCCDC-710920/2024 | K | 33 | T | 85 | 20240422 |
| EPI_ISL_19813398 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56797/2025 | K | 33 | R | 333 | 20250318 |
| EPI_ISL_16497027 | NSP3 | hCoV-19/Japan/TKYkbm71298/2022 | K | 33 | I | 27 | 20221212 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | K | 33 | D | 16 | 20230410 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 33 | Q | 7 | 20221229 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | K | 33 | insY | 1 | 20220118 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | K | 33 | del | 16 | 20230403 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | K | 33 | A | 2 | 20241226 |
| EPI_ISL_8806990 | NSP3 | hCoV-19/India/GA-NCCS-3055200189706/2021 | V | 34 | S | 3 | 20211007 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | V | 34 | Q | 3 | 20230217 |
| EPI_ISL_19700702 | NSP3 | hCoV-19/Japan/FR019-0039/2024 | V | 34 | G | 1 | 20241220 |
| EPI_ISL_17523135 | NSP3 | hCoV-19/env/Ukraine/77417/2023 | V | 34 | del | 16 | 20230403 |
| EPI_ISL_19724904 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015664/2024 | V | 34 | I | 189 | 20241202 |
| EPI_ISL_17715091 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-81/2023 | V | 34 | T | 4 | 20230424 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | V | 34 | R | 3 | 20240307 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | V | 34 | E | 3 | 20211228 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | V | 34 | D | 2 | 20210420 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 34 | P | 3 | 20221229 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | V | 34 | Y | 1173 | 20250312 |
| EPI_ISL_3756838 | NSP3 | hCoV-19/USA/ID-IBL-747076/2021 | V | 34 | stop | 1 | 20210806 |
| EPI_ISL_19493273 | NSP3 | hCoV-19/USA/CA-SCPHL-24WGS00811/2024 | V | 34 | A | 1232 | 20240919 |
| EPI_ISL_19518197 | NSP3 | hCoV-19/Finland/THL-06722/2024 | V | 34 | L | 114 | 20240923 |
| EPI_ISL_14392278 | NSP3 | hCoV-19/Finland/SYN-7583/2022 | L | 35 | H | 7 | 20220714 |
| EPI_ISL_3756838 | NSP3 | hCoV-19/USA/ID-IBL-747076/2021 | L | 35 | Q | 1 | 20210806 |
| EPI_ISL_10851666 | NSP3 | hCoV-19/Pakistan/AKU-JAN-RUN2-13/2022 | L | 35 | V | 3 | 20220108 |
| EPI_ISL_11514248 | NSP3 | hCoV-19/Brazil/PA-ITV-3428/2021 | L | 35 | K | 2 | 20211015 |
| EPI_ISL_19499218 | NSP3 | hCoV-19/USA/TX-HMH-M-146357/2024 | L | 35 | del | 13 | 20240913 |
| EPI_ISL_8806990 | NSP3 | hCoV-19/India/GA-NCCS-3055200189706/2021 | L | 35 | Y | 2 | 20211007 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 35 | T | 6 | 20221229 |
| EPI_ISL_19671199 | NSP3 | hCoV-19/USA/CA-PFZ03133/2024 | L | 35 | F | 599 | 20241223 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | L | 35 | D | 1 | 20210420 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | L | 35 | R | 3 | 20230410 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | L | 35 | insstop | 1 | 20210918 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | L | 35 | G | 1 | 20230414 |
| EPI_ISL_12320511 | NSP3 | hCoV-19/Turkey/HSGM-GS2170/2022 | L | 35 | P | 6 | 20220401 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 35 | E | 4 | 20241226 |
| EPI_ISL_19181238 | NSP3 | hCoV-19/Singapore/R32MQ22/2024 | L | 35 | J | 12 | 20240527 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | L | 35 | insstopstop | 1 | 20210813 |
| EPI_ISL_18409015 | NSP3 | hCoV-19/South Korea/KDCA267817/2023 | L | 35 | I | 808 | 20230918 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | L | 35 | M | 5 | 20230217 |
| EPI_ISL_17715091 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-81/2023 | L | 35 | stop | 3 | 20230424 |
| EPI_ISL_19550657 | NSP3 | hCoV-19/Sweden/M-SUS0023806/2024 | N | 36 | K | 227 | 20241107 |
| EPI_ISL_14356734 | NSP3 | hCoV-19/Chile/BI-95649/2022 | N | 36 | V | 1 | 20220803 |
| EPI_ISL_17242455 | NSP3 | hCoV-19/India/MH_BJCOG_5205/2023 | N | 36 | H | 7 | 20230306 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | N | 36 | L | 8 | 20210918 |
| EPI_ISL_3923063 | NSP3 | hCoV-19/USA/ID-IBL-749041/2021 | N | 36 | insFstopstopKDstopstopSTstopstop | 1 | 20210813 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | N | 36 | A | 3 | 20241226 |
| EPI_ISL_19700702 | NSP3 | hCoV-19/Japan/FR019-0039/2024 | N | 36 | I | 62 | 20241220 |
| EPI_ISL_19330706 | NSP3 | hCoV-19/Japan/7530074_S20/2024 | N | 36 | T | 85 | 20240726 |
| EPI_ISL_17474687 | NSP3 | hCoV-19/Pakistan/BATCH-02-SAMPLE14/2023 | N | 36 | F | 2 | 20230221 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | N | 36 | C | 1 | 20220916 |
| EPI_ISL_3242922 | NSP3 | hCoV-19/USA/ID-IBL-640883/2020 | N | 36 | insstop | 1 | 20200809 |
| EPI_ISL_19315583 | NSP3 | hCoV-19/Japan/FR302-0979/2024 | N | 36 | D | 299 | 20240708 |
| EPI_ISL_18264433 | NSP3 | hCoV-19/USA/TX-HMH-M-133304/2023 | N | 36 | R | 5 | 20230901 |
| EPI_ISL_14588245 | NSP3 | hCoV-19/USA/ID-IBL-843831/2022 | N | 36 | stop | 6 | 20220731 |
| EPI_ISL_18899525 | NSP3 | hCoV-19/USA/LA-EVTL21183/2024 | N | 36 | Y | 19 | 20240203 |
| EPI_ISL_19728157 | NSP3 | hCoV-19/USA/NY-URMC-P3S1T919-1/2025 | N | 36 | S | 205 | 20250117 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | N | 36 | E | 6 | 20230410 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | N | 36 | M | 1158 | 20250312 |
| EPI_ISL_3299471 | NSP3 | hCoV-19/Sweden/UUH-000199863227N2/2021 | N | 36 | insXX | 1 | 20210428 |
| EPI_ISL_18781776 | NSP3 | hCoV-19/Mongolia/UB-202310401/2023 | N | 36 | B | 15 | 20231207 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | N | 36 | Q | 2 | 20230414 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | N | 36 | del | 21 | 20230415 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | N | 36 | G | 1 | 20210420 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 37 | P | 2 | 20220210 |
| EPI_ISL_19707731 | NSP3 | hCoV-19/Japan/FR011-0016/2025 | E | 37 | A | 153 | 20250110 |
| EPI_ISL_16676512 | NSP3 | hCoV-19/England/BRBR-326A4913/2023 | E | 37 | Z | 14 | 20230118 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | E | 37 | H | 1 | 20220916 |
| EPI_ISL_19413999 | NSP3 | hCoV-19/USA/NV-SNPHL-818126/2024 | E | 37 | G | 168 | 20240902 |
| EPI_ISL_14333831 | NSP3 | hCoV-19/USA/ID-IBL-841143/2022 | E | 37 | M | 4 | 20220728 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | E | 37 | F | 1 | 20210420 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | E | 37 | S | 1 | 20220727 |
| EPI_ISL_11931682 | NSP3 | hCoV-19/England/DHSC-CYBQC4S/2022 | E | 37 | stop | 8 | 20220211 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | E | 37 | insT | 1 | 20230217 |
| EPI_ISL_19799566 | NSP3 | hCoV-19/USA/TX-HMH-M-147741/2025 | E | 37 | K | 190 | 20250312 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | E | 37 | T | 1 | 20210118 |
| EPI_ISL_463985 | NSP3 | hCoV-19/Canada/ON_MU-S401/2020 | E | 37 | insGTV | 1 | 20200330 |
| EPI_ISL_17334160 | NSP3 | hCoV-19/USA/NE-NPHL23-1048/2023 | E | 37 | Q | 18 | 20230320 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | E | 37 | Y | 1 | 20210918 |
| EPI_ISL_19824208 | NSP3 | hCoV-19/USA/IL-RIPHL_15516_G/2025 | E | 37 | D | 625 | 20250320 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | E | 37 | R | 1162 | 20250312 |
| EPI_ISL_18967981 | NSP3 | hCoV-19/Shanghai/SCDC-HS0206-117/2024 | E | 37 | V | 29 | 20240202 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | E | 37 | del | 20 | 20230415 |
| EPI_ISL_19711330 | NSP3 | hCoV-19/Peru/LIM-INS-51081/2024 | K | 38 | Q | 38 | 20241112 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | K | 38 | F | 1 | 20230420 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | K | 38 | I | 2 | 20210424 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | K | 38 | S | 15 | 20220728 |
| EPI_ISL_3494210 | NSP3 | hCoV-19/USA/MA-NEIDL-00690/2021 | K | 38 | H | 4 | 20210330 |
| EPI_ISL_19574170 | NSP3 | hCoV-19/USA/NJ-CDC-LC1125436/2024 | K | 38 | T | 21 | 20241114 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 38 | A | 4 | 20221229 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | K | 38 | R | 1567449 | 20250329 |
| EPI_ISL_19192475 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16023/2024 | K | 38 | V | 20 | 20240324 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | K | 38 | L | 3 | 20230410 |
| EPI_ISL_19067053 | NSP3 | hCoV-19/Chile/RM-USACH-00552/2023 | K | 38 | M | 50 | 20231120 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | K | 38 | del | 1191 | 20250312 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | K | 38 | E | 36 | 20240319 |
| EPI_ISL_10462858 | NSP3 | hCoV-19/England/LSPA-37FCB15/2022 | K | 38 | W | 5 | 20220221 |
| EPI_ISL_14595267 | NSP3 | hCoV-19/India/TN-CBR-6904/2021 | K | 38 | insFKEGVE | 2 | 20210916 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | K | 38 | D | 2 | 20230217 |
| EPI_ISL_9196489 | NSP3 | hCoV-19/Nigeria/PHR-LA-029/2021 | K | 38 | stop | 12 | 20211129 |
| EPI_ISL_18098343 | NSP3 | hCoV-19/Kenya/KNPHLGEN129/2022 | K | 38 | G | 5 | 20221218 |
| EPI_ISL_19735550 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56369/2025 | K | 38 | N | 146 | 20250205 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | C | 39 | V | 11 | 20240319 |
| EPI_ISL_19192475 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16023/2024 | C | 39 | L | 21 | 20240324 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | C | 39 | E | 1 | 20230410 |
| EPI_ISL_15740412 | NSP3 | hCoV-19/Singapore/14523/2022 | C | 39 | Y | 5 | 20221104 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | C | 39 | del | 1196 | 20250312 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | C | 39 | stop | 2 | 20210918 |
| EPI_ISL_19468699 | NSP3 | hCoV-19/Canada/BC-BCCDC-735254/2024 | C | 39 | S | 6 | 20240915 |
| EPI_ISL_3636272 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ13948/2021 | C | 39 | W | 1 | 20210806 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | C | 39 | T | 1 | 20220916 |
| EPI_ISL_14038032 | NSP3 | hCoV-19/Chile/AN-85819/2022 | C | 39 | insXX | 1 | 20220707 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | C | 39 | R | 9 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 39 | I | 6 | 20220210 |
| EPI_ISL_16028174 | NSP3 | hCoV-19/Slovakia/BA_22_00040895/2022 | C | 39 | F | 14 | 20221104 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | C | 39 | A | 4 | 20220307 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | C | 39 | insKVTR | 1 | 20230217 |
| EPI_ISL_3543382 | NSP3 | hCoV-19/USA/ID-IBL-632544/2020 | C | 39 | insLCLYSstop | 1 | 20200718 |
| EPI_ISL_19330706 | NSP3 | hCoV-19/Japan/7530074_S20/2024 | C | 39 | G | 2 | 20240726 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | C | 39 | N | 2 | 20220210 |
| EPI_ISL_14234883 | NSP3 | hCoV-19/England/PHEC-YYGJZAY/2022 | S | 40 | T | 5 | 20220719 |
| EPI_ISL_11925919 | NSP3 | hCoV-19/England/DHSC-CYB79AE/2022 | S | 40 | G | 3 | 20220210 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | S | 40 | del | 30 | 20230415 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 40 | Q | 4 | 20230217 |
| EPI_ISL_18287767 | NSP3 | hCoV-19/France/IDF-AphpSA-882308018832/2023 | S | 40 | stop | 1 | 20230807 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | S | 40 | E | 3 | 20230217 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | S | 40 | insXXX | 1 | 20230217 |
| EPI_ISL_19473093 | NSP3 | hCoV-19/USA/NY-CDC-QDX24064352/2024 | S | 40 | P | 85 | 20240922 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | S | 40 | insYSstopT | 1 | 20220118 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | S | 40 | R | 1 | 20210809 |
| EPI_ISL_19715732 | NSP3 | hCoV-19/USA/NY-NYULH-22075/2025 | S | 40 | F | 2603 | 20250201 |
| EPI_ISL_19567958 | NSP3 | hCoV-19/Japan/FR004-0558/2024 | S | 40 | Y | 881 | 20241101 |
| EPI_ISL_19765532 | NSP3 | hCoV-19/Bahrain/PHD-24480007514/2024 | S | 40 | A | 140 | 20240912 |
| EPI_ISL_19192475 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16023/2024 | S | 40 | C | 23 | 20240324 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | S | 40 | K | 1 | 20210420 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | S | 40 | V | 8 | 20240319 |
| EPI_ISL_17275313 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45838/2023 | S | 40 | L | 3 | 20230217 |
| EPI_ISL_19824332 | NSP3 | hCoV-19/Mexico/CMX-INER-INMEGEN-3162/2024 | A | 41 | D | 71 | 20241001 |
| EPI_ISL_19411246 | NSP3 | hCoV-19/USA/RI_RISHL_01737/2024 | A | 41 | S | 184 | 20240816 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | A | 41 | R | 4 | 20220118 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | A | 41 | del | 23 | 20230415 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 41 | Q | 1 | 20210318 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | A | 41 | C | 1 | 20210801 |
| EPI_ISL_19192475 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16023/2024 | A | 41 | L | 29 | 20240324 |
| EPI_ISL_13840212 | NSP3 | hCoV-19/France/IDF-APHPSU-PSL-662206078394/2022 | A | 41 | P | 2 | 20220626 |
| EPI_ISL_19348678 | NSP3 | hCoV-19/Morocco/4/2020 | A | 41 | insVWL | 1 | 20201206 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | A | 41 | K | 1 | 20230420 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | A | 41 | Y | 1 | 20210813 |
| EPI_ISL_19826387 | NSP3 | hCoV-19/Canada/ON-PHL-202505086/2025 | A | 41 | V | 8499 | 20250329 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | A | 41 | F | 3 | 20230217 |
| EPI_ISL_18572269 | NSP3 | hCoV-19/Italy/SIC-AOUME-UOSD-GCL-197504126-2021-2385/2021 | A | 41 | E | 1 | 20210929 |
| EPI_ISL_15500957 | NSP3 | hCoV-19/USA/PA-PHL2-A-H04-0809/2022 | A | 41 | G | 15 | 20220711 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | A | 41 | I | 6 | 20230410 |
| EPI_ISL_19652634 | NSP3 | hCoV-19/Denmark/DCGC-691266/2024 | A | 41 | T | 735 | 20241202 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | Y | 42 | N | 2 | 20230401 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | Y | 42 | I | 2 | 20230410 |
| EPI_ISL_19656686 | NSP3 | hCoV-19/Germany/BE-RKI-I-1146773/2024 | Y | 42 | H | 59 | 20241122 |
| EPI_ISL_19706143 | NSP3 | hCoV-19/South Korea/KDCA296818/2024 | Y | 42 | C | 53 | 20241227 |
| EPI_ISL_19081228 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-0838/2024 | Y | 42 | F | 19 | 20240407 |
| EPI_ISL_14366975 | NSP3 | hCoV-19/India/MH-NCCS-C265434/2022 | Y | 42 | stop | 3 | 20220108 |
| EPI_ISL_12415232 | NSP3 | hCoV-19/India/MP-INSACOG-DRDE-1054/2022 | Y | 42 | S | 3 | 20220227 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | Y | 42 | del | 23 | 20230415 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Y | 42 | V | 2 | 20230420 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | Y | 42 | Q | 2 | 20230217 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | Y | 42 | L | 1185 | 20250312 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Y | 42 | P | 2 | 20221229 |
| EPI_ISL_2484317 | NSP3 | hCoV-19/Switzerland/BS-UHB-42728496/2021 | Y | 42 | T | 1 | 20210306 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | Y | 42 | K | 7 | 20240319 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | T | 43 | insstopTRYRSKstop | 1 | 20210809 |
| EPI_ISL_18936181 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00159/2023 | T | 43 | L | 3 | 20230421 |
| EPI_ISL_10372893 | NSP3 | hCoV-19/USA/OR-CDC-ASC210551876/2022 | T | 43 | M | 2 | 20220210 |
| EPI_ISL_14366975 | NSP3 | hCoV-19/India/MH-NCCS-C265434/2022 | T | 43 | Q | 2 | 20220108 |
| EPI_ISL_18468738 | NSP3 | hCoV-19/Bulgaria/2123/2022 | T | 43 | C | 1 | 20221110 |
| EPI_ISL_17530316 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14067/2023 | T | 43 | R | 9 | 20230407 |
| EPI_ISL_13422085 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2464/2022 | T | 43 | K | 6 | 20220607 |
| EPI_ISL_14333831 | NSP3 | hCoV-19/USA/ID-IBL-841143/2022 | T | 43 | V | 1 | 20220728 |
| EPI_ISL_18962998 | NSP3 | hCoV-19/Germany/BW-RKI-I-1142940/2024 | T | 43 | A | 62 | 20240220 |
| EPI_ISL_19825432 | NSP3 | hCoV-19/USA/NE-NPHL-RP252296/2025 | T | 43 | I | 3480 | 20250404 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | T | 43 | del | 25 | 20230415 |
| EPI_ISL_19294009 | NSP3 | hCoV-19/USA/LA-EVTL22250/2024 | T | 43 | S | 32 | 20240626 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | T | 43 | F | 1 | 20210118 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | T | 43 | P | 1184 | 20250312 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | T | 43 | insstop | 5 | 20220124 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | T | 43 | N | 1 | 20230410 |
| EPI_ISL_13257793 | NSP3 | hCoV-19/Kazakhstan/ALA-NRL-S1528/2022 | T | 43 | stop | 2 | 20220413 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | T | 43 | Y | 1 | 20210118 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 43 | D | 1 | 20210801 |
| EPI_ISL_18104503 | NSP3 | hCoV-19/USA/CA-CDC-QDX83301101/2023 | V | 44 | F | 95 | 20230728 |
| EPI_ISL_19659016 | NSP3 | hCoV-19/South Korea/KDCA296602/2024 | V | 44 | D | 24 | 20240801 |
| EPI_ISL_18493638 | NSP3 | hCoV-19/Brazil/MG-FUNED-311628705/2023 | V | 44 | A | 30 | 20230918 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | V | 44 | I | 1559 | 20250312 |
| EPI_ISL_14333831 | NSP3 | hCoV-19/USA/ID-IBL-841143/2022 | V | 44 | N | 1 | 20220728 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | V | 44 | T | 7 | 20220124 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | V | 44 | del | 49 | 20230415 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | V | 44 | H | 2 | 20240123 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | V | 44 | G | 13 | 20240319 |
| EPI_ISL_11907647 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-26/2022 | V | 44 | Y | 1 | 20220210 |
| EPI_ISL_479743 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0072/2020 | V | 44 | insELGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGDVYKRQAYTV | 2 | 20200617 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | V | 44 | stop | 3 | 20210915 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | V | 44 | E | 2 | 20230217 |
| EPI_ISL_479745 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0074/2020 | V | 44 | insELGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGDVYKRQAYTV | 1 | 20200617 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | V | 44 | L | 32 | 20230420 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | V | 44 | S | 4 | 20220118 |
| EPI_ISL_14854168 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-145/2022 | V | 44 | K | 4 | 20220423 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 44 | P | 1 | 20220210 |
| EPI_ISL_19504800 | NSP3 | hCoV-19/Australia/WA16457/2024 | E | 45 | A | 22 | 20241001 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | E | 45 | Q | 1208 | 20250312 |
| EPI_ISL_17026764 | NSP3 | hCoV-19/England/BRBR-326D9A9A/2023 | E | 45 | Z | 16 | 20230218 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 45 | del | 55 | 20230420 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | E | 45 | L | 2 | 20230414 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | E | 45 | S | 2 | 20230410 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | E | 45 | D | 11 | 20240319 |
| EPI_ISL_19546642 | NSP3 | hCoV-19/Spain/VC-FISABIO-125018/2024 | E | 45 | V | 7 | 20240904 |
| EPI_ISL_19363834 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14089/2024 | E | 45 | stop | 2 | 20240411 |
| EPI_ISL_19348678 | NSP3 | hCoV-19/Morocco/4/2020 | E | 45 | Y | 1 | 20201206 |
| EPI_ISL_8806455 | NSP3 | hCoV-19/India/GA-NCCS-3055200162938/2021 | E | 45 | N | 3 | 20210819 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | E | 45 | T | 1 | 20210915 |
| EPI_ISL_11907647 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-26/2022 | E | 45 | insPV | 1 | 20220210 |
| EPI_ISL_19176965 | NSP3 | hCoV-19/Wales/CLIMB-CM7YRAIC/2024 | E | 45 | K | 40 | 20240520 |
| EPI_ISL_17530316 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14067/2023 | E | 45 | C | 5 | 20230407 |
| EPI_ISL_17631366 | NSP3 | hCoV-19/Singapore/R9NP14/2023 | E | 45 | G | 62 | 20230427 |
| EPI_ISL_14333831 | NSP3 | hCoV-19/USA/ID-IBL-841143/2022 | E | 45 | R | 10 | 20220728 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | E | 45 | H | 1 | 20220801 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 45 | I | 1 | 20210318 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | L | 46 | Y | 6 | 20220124 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | L | 46 | G | 1 | 20210118 |
| EPI_ISL_18936176 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00152/2023 | L | 46 | del | 54 | 20230420 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | L | 46 | M | 2 | 20220801 |
| EPI_ISL_19785385 | NSP3 | hCoV-19/Japan/FR302-0228/2025 | L | 46 | I | 504 | 20250212 |
| EPI_ISL_3556823 | NSP3 | hCoV-19/USA/ID-IBL-631022/2020 | L | 46 | E | 1 | 20200714 |
| EPI_ISL_8806455 | NSP3 | hCoV-19/India/GA-NCCS-3055200162938/2021 | L | 46 | S | 4 | 20210819 |
| EPI_ISL_14593857 | NSP3 | hCoV-19/India/KA-CBR-S3412/2021 | L | 46 | insIYF | 1 | 20210619 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | L | 46 | insCC | 1 | 20210809 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 46 | K | 1 | 20220210 |
| EPI_ISL_17530316 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14067/2023 | L | 46 | C | 4 | 20230407 |
| EPI_ISL_18365884 | NSP3 | hCoV-19/Australia/QLD0x013992/2023 | L | 46 | N | 1 | 20230926 |
| EPI_ISL_18626319 | NSP3 | hCoV-19/Sweden/O-14_SE300_DC23-006617/2023 | L | 46 | J | 18 | 20231212 |
| EPI_ISL_19811927 | NSP3 | hCoV-19/Australia/QLD0x015443/2025 | L | 46 | F | 1592 | 20250319 |
| EPI_ISL_19516664 | NSP3 | hCoV-19/Austria/MUW_1763139/2024 | L | 46 | P | 34 | 20241015 |
| EPI_ISL_19193971 | NSP3 | hCoV-19/Spain/GU-GUT-88270177/2024 | L | 46 | H | 74 | 20240514 |
| EPI_ISL_17591970 | NSP3 | hCoV-19/Nepal/NPHL-S-2423/2023 | L | 46 | insNLF | 1 | 20230311 |
| EPI_ISL_18237791 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YK9T6/2023 | L | 46 | V | 9 | 20230824 |
| EPI_ISL_18614341 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC44414/2023 | L | 46 | R | 60 | 20231121 |
| EPI_ISL_19527411 | NSP3 | hCoV-19/Canada/ON-KHS-05181-v1/2024 | G | 47 | S | 643 | 20241024 |
| EPI_ISL_12146072 | NSP3 | hCoV-19/Turkey/HSGM-GS1543/2022 | G | 47 | I | 2 | 20220401 |
| EPI_ISL_19200605 | NSP3 | hCoV-19/Hubei/HCDC-WH5549/2024 | G | 47 | R | 10 | 20240610 |
| EPI_ISL_17537931 | NSP3 | hCoV-19/USA/NJ-GBW-H20-270-8346/2023 | G | 47 | insS | 1 | 20230413 |
| EPI_ISL_19348678 | NSP3 | hCoV-19/Morocco/4/2020 | G | 47 | M | 1 | 20201206 |
| EPI_ISL_11907647 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-26/2022 | G | 47 | W | 2 | 20220210 |
| EPI_ISL_19648134 | NSP3 | hCoV-19/Luxembourg/LNS3615368/2024 | G | 47 | D | 297 | 20241119 |
| EPI_ISL_18896416 | NSP3 | hCoV-19/Germany/NW-RKI-I-1142065/2023 | G | 47 | V | 90 | 20231220 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | G | 47 | Q | 1 | 20240319 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | G | 47 | P | 3 | 20230420 |
| EPI_ISL_1909249 | NSP3 | hCoV-19/Morocco/FMP-284/2021 | G | 47 | F | 1 | 20210416 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | G | 47 | K | 2 | 20230414 |
| EPI_ISL_18936196 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00036/2023 | G | 47 | T | 1 | 20230408 |
| EPI_ISL_19334629 | NSP3 | hCoV-19/Egypt/CPHL-EGY24149/2024 | G | 47 | A | 8 | 20240623 |
| EPI_ISL_11944131 | NSP3 | hCoV-19/England/DHSC-CYN5QWR/2022 | G | 47 | insC | 1 | 20220119 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | G | 47 | N | 1177 | 20250312 |
| EPI_ISL_18936256 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00164/2023 | G | 47 | del | 109 | 20230422 |
| EPI_ISL_906131 | NSP3 | hCoV-19/Slovenia/NK8010/2021 | G | 47 | E | 2 | 20210118 |
| EPI_ISL_19348699 | NSP3 | hCoV-19/Morocco/25/2020 | G | 47 | L | 1 | 20200923 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | G | 47 | stop | 1 | 20220726 |
| EPI_ISL_19768191 | NSP3 | hCoV-19/France/PAC-RELAB-HCL025030517101/2025 | G | 47 | C | 631 | 20250212 |
| EPI_ISL_3556823 | NSP3 | hCoV-19/USA/ID-IBL-631022/2020 | G | 47 | insRTC | 1 | 20200714 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | G | 47 | Y | 2 | 20220210 |
| EPI_ISL_19140715 | NSP3 | hCoV-19/Pakistan/13851203/2024 | T | 48 | del | 107 | 20240224 |
| EPI_ISL_19803234 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530878/2025 | T | 48 | S | 1197 | 20250312 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | T | 48 | insA | 1 | 20210730 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 48 | F | 1 | 20220210 |
| EPI_ISL_19140718 | NSP3 | hCoV-19/Pakistan/11446874/2024 | T | 48 | L | 5 | 20240308 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | T | 48 | Y | 2 | 20230414 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | T | 48 | R | 10 | 20240320 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | T | 48 | insVQ | 1 | 20210803 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 48 | D | 1 | 20210318 |
| EPI_ISL_17496570 | NSP3 | hCoV-19/Australia/QLD0x013164/2023 | T | 48 | K | 33 | 20230328 |
| EPI_ISL_11907647 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-26/2022 | T | 48 | Q | 6 | 20220210 |
| EPI_ISL_9805323 | NSP3 | hCoV-19/Brazil/SP-IB_150650/2022 | T | 48 | insEVNEFACVVAECSAYTVELGT | 2 | 20220126 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | T | 48 | N | 5 | 20220108 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | T | 48 | P | 3 | 20240319 |
| EPI_ISL_19784395 | NSP3 | hCoV-19/New Zealand/25YA0653/2025 | T | 48 | I | 5312 | 20250303 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | T | 48 | V | 6 | 20220916 |
| EPI_ISL_19781740 | NSP3 | hCoV-19/USA/CT-DPH-1279246001/2025 | T | 48 | A | 689 | 20250211 |
| EPI_ISL_9191018 | NSP3 | hCoV-19/Chile/RM-199382/2021 | T | 48 | E | 2 | 20211228 |
| EPI_ISL_17275338 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45863/2023 | T | 48 | H | 1 | 20230217 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | E | 49 | S | 7 | 20220916 |
| EPI_ISL_19140715 | NSP3 | hCoV-19/Pakistan/13851203/2024 | E | 49 | del | 119 | 20240224 |
| EPI_ISL_19562735 | NSP3 | hCoV-19/USA/TX-KVI401202/2024 | E | 49 | K | 221 | 20241023 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | E | 49 | T | 4 | 20230406 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | E | 49 | F | 2 | 20230414 |
| EPI_ISL_5484223 | NSP3 | hCoV-19/England/PHEC-3M0A4M07/2021 | E | 49 | Y | 1 | 20211016 |
| EPI_ISL_18255146 | NSP3 | hCoV-19/Pakistan/PACP-B13-S06/2023 | E | 49 | stop | 11 | 20230312 |
| EPI_ISL_19762096 | NSP3 | hCoV-19/Germany/NI-RKI-I-1147843/2025 | E | 49 | G | 410 | 20250217 |
| EPI_ISL_11907647 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-26/2022 | E | 49 | M | 1 | 20220210 |
| EPI_ISL_18837995 | NSP3 | hCoV-19/Japan/TKYnat16185/2024 | E | 49 | A | 90 | 20240106 |
| EPI_ISL_17422685 | NSP3 | hCoV-19/USA/CA-SEARCH-133254/2023 | E | 49 | V | 20 | 20230122 |
| EPI_ISL_5274274 | NSP3 | hCoV-19/England/PHEC-3K044KD0/2021 | E | 49 | N | 1 | 20210926 |
| EPI_ISL_3556832 | NSP3 | hCoV-19/USA/ID-IBL-631302/2020 | E | 49 | insAKstopVR | 1 | 20200715 |
| EPI_ISL_19215057 | NSP3 | hCoV-19/Spain/RI-CIBIR-316316252-Run52/2024 | E | 49 | Z | 4 | 20240215 |
| EPI_ISL_10924347 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11642/2022 | E | 49 | C | 3 | 20220226 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | E | 49 | L | 9 | 20240320 |
| EPI_ISL_19143508 | NSP3 | hCoV-19/Pakistan/GRH42618/2024 | E | 49 | Q | 52 | 20240325 |
| EPI_ISL_17530376 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13869/2023 | E | 49 | P | 8 | 20230314 |
| EPI_ISL_19078138 | NSP3 | hCoV-19/USA/WI-WSLH-2400079/2023 | E | 49 | D | 362 | 20231211 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | E | 49 | I | 1 | 20220131 |
| EPI_ISL_14488405 | NSP3 | hCoV-19/USA/ID-IBL-841488/2022 | E | 49 | R | 8 | 20220728 |
| EPI_ISL_570609 | NSP3 | hCoV-19/USA/WA-UW-22731/2020 | V | 50 | F | 2 | 20200807 |
| EPI_ISL_11403527 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-20/2022 | V | 50 | stop | 13 | 20220208 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | V | 50 | K | 6 | 20211009 |
| EPI_ISL_17530376 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13869/2023 | V | 50 | insLW | 2 | 20230314 |
| EPI_ISL_17530350 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13878/2023 | V | 50 | S | 6 | 20230402 |
| EPI_ISL_4122646 | NSP3 | hCoV-19/England/PHEC-X308XA43/2021 | V | 50 | D | 1 | 20210830 |
| EPI_ISL_11887843 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0818/2022 | V | 50 | R | 2 | 20220126 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | V | 50 | E | 6 | 20240319 |
| EPI_ISL_19775740 | NSP3 | hCoV-19/USA/CO-CDPHE-43093403/2025 | V | 50 | I | 468 | 20250209 |
| EPI_ISL_17275338 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45863/2023 | V | 50 | M | 3 | 20230217 |
| EPI_ISL_5484223 | NSP3 | hCoV-19/England/PHEC-3M0A4M07/2021 | V | 50 | P | 1 | 20211016 |
| EPI_ISL_3756838 | NSP3 | hCoV-19/USA/ID-IBL-747076/2021 | V | 50 | Y | 4 | 20210806 |
| EPI_ISL_19831956 | NSP3 | hCoV-19/Wales/CLIMB-CM7YR9NA/2025 | V | 50 | L | 3021 | 20250326 |
| EPI_ISL_9805356 | NSP3 | hCoV-19/Brazil/SP-IB_150664/2022 | V | 50 | insNEFACVVADAVAYTVELGTEV | 13 | 20220126 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | V | 50 | T | 4 | 20230217 |
| EPI_ISL_19140718 | NSP3 | hCoV-19/Pakistan/11446874/2024 | V | 50 | G | 3 | 20240308 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | V | 50 | insR | 1 | 20200626 |
| EPI_ISL_18781778 | NSP3 | hCoV-19/Mongolia/UB-202310701/2023 | V | 50 | A | 169 | 20231222 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | V | 50 | Q | 7 | 20220124 |
| EPI_ISL_19140715 | NSP3 | hCoV-19/Pakistan/13851203/2024 | V | 50 | del | 193 | 20240224 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 50 | insCINGLMLLEIKD | 1 | 20221229 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | V | 50 | C | 8 | 20240320 |
| EPI_ISL_19736445 | NSP3 | hCoV-19/France/PAC-RELAB-HCL725000027401/2025 | N | 51 | H | 102 | 20250205 |
| EPI_ISL_7968963 | NSP3 | hCoV-19/England/ALDP-2E92764/2021 | N | 51 | insKVE | 8 | 20211210 |
| EPI_ISL_5484223 | NSP3 | hCoV-19/England/PHEC-3M0A4M07/2021 | N | 51 | A | 1 | 20211016 |
| EPI_ISL_19806836 | NSP3 | hCoV-19/Spain/CL-UCHV-49910/2025 | N | 51 | S | 1015 | 20250212 |
| EPI_ISL_2616632 | NSP3 | hCoV-19/USA/WY-WYPHL-21035855/2021 | N | 51 | insLLN | 1 | 20210513 |
| EPI_ISL_3756838 | NSP3 | hCoV-19/USA/ID-IBL-747076/2021 | N | 51 | R | 2 | 20210806 |
| EPI_ISL_7857760 | NSP3 | hCoV-19/USA/CA-CDPH-2000008515/2020 | N | 51 | insGGG | 1 | 20201209 |
| EPI_ISL_19748919 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00022353_01/2024 | N | 51 | D | 440 | 20241030 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | N | 51 | C | 4 | 20240320 |
| EPI_ISL_19348678 | NSP3 | hCoV-19/Morocco/4/2020 | N | 51 | insLNW | 1 | 20201206 |
| EPI_ISL_19412533 | NSP3 | hCoV-19/Romania/231293/2024 | N | 51 | Y | 56 | 20240727 |
| EPI_ISL_19164450 | NSP3 | hCoV-19/Taiwan/CDC-F92746/2024 | N | 51 | T | 157 | 20240522 |
| EPI_ISL_3556822 | NSP3 | hCoV-19/USA/ID-IBL-631020/2020 | N | 51 | insstopV | 1 | 20200714 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | N | 51 | stop | 3 | 20211009 |
| EPI_ISL_19014042 | NSP3 | hCoV-19/Japan/7517659_S41/2024 | N | 51 | E | 2 | 20240118 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | N | 51 | G | 3 | 20230406 |
| EPI_ISL_17294393 | NSP3 | hCoV-19/South Korea/KDCA221654/2023 | N | 51 | I | 27 | 20230303 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | N | 51 | V | 8 | 20220124 |
| EPI_ISL_8806455 | NSP3 | hCoV-19/India/GA-NCCS-3055200162938/2021 | N | 51 | M | 6 | 20210819 |
| EPI_ISL_17316765 | NSP3 | hCoV-19/Germany/SH-RKI-I-499106/2022 | N | 51 | insPRG | 1 | 20220113 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | N | 51 | Q | 7 | 20240319 |
| EPI_ISL_19464149 | NSP3 | hCoV-19/USA/CA-SC-285428/2024 | N | 51 | B | 15 | 20240725 |
| EPI_ISL_19825283 | NSP3 | hCoV-19/USA/NY-NYULH-22565/2025 | N | 51 | K | 1358 | 20250331 |
| EPI_ISL_19140715 | NSP3 | hCoV-19/Pakistan/13851203/2024 | N | 51 | del | 104 | 20240224 |
| EPI_ISL_13576088 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-10629/2022 | N | 51 | F | 1 | 20220611 |
| EPI_ISL_19261789 | NSP3 | hCoV-19/Dominican Republic/2183320-LNSPDD/2024 | E | 52 | K | 274 | 20240619 |
| EPI_ISL_19196545 | NSP3 | hCoV-19/USA/CA-SCPHL-24WGS00304/2024 | E | 52 | A | 174 | 20240515 |
| EPI_ISL_9805460 | NSP3 | hCoV-19/Brazil/SP-IB_150619/2022 | E | 52 | insFACVVADAVAXTVELGTEVNE | 1 | 20220121 |
| EPI_ISL_10924347 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11642/2022 | E | 52 | insN | 1 | 20220226 |
| EPI_ISL_3756838 | NSP3 | hCoV-19/USA/ID-IBL-747076/2021 | E | 52 | insKstop | 1 | 20210806 |
| EPI_ISL_19363833 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14088/2024 | E | 52 | Q | 16 | 20240407 |
| EPI_ISL_17371305 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS_92372/2023 | E | 52 | Z | 10 | 20230227 |
| EPI_ISL_17540645 | NSP3 | hCoV-19/Finland/THL-04372/2023 | E | 52 | V | 41 | 20230410 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | E | 52 | N | 3 | 20230217 |
| EPI_ISL_18936196 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00036/2023 | E | 52 | stop | 20 | 20230408 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | E | 52 | insstopstopSTstopstopSA | 1 | 20210806 |
| EPI_ISL_19143508 | NSP3 | hCoV-19/Pakistan/GRH42618/2024 | E | 52 | S | 41 | 20240325 |
| EPI_ISL_17530376 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13869/2023 | E | 52 | M | 2 | 20230314 |
| EPI_ISL_19677615 | NSP3 | hCoV-19/Argentina/INEI127337/2024 | E | 52 | G | 157 | 20241217 |
| EPI_ISL_4530175 | NSP3 | hCoV-19/England/PHEC-3G072G79/2021 | E | 52 | insPVLWQM | 1 | 20210919 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | E | 52 | P | 4 | 20240319 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | E | 52 | H | 2 | 20220916 |
| EPI_ISL_19140715 | NSP3 | hCoV-19/Pakistan/13851203/2024 | E | 52 | del | 98 | 20240224 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 52 | C | 3 | 20220210 |
| EPI_ISL_2272516 | NSP3 | hCoV-19/Mexico/SIN-CIAD-L8628/2021 | E | 52 | I | 1 | 20210423 |
| EPI_ISL_17530325 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13902/2023 | E | 52 | R | 12 | 20230405 |
| EPI_ISL_19758263 | NSP3 | hCoV-19/USA/MN-MDH-46226/2025 | E | 52 | D | 566 | 20250208 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 52 | L | 2 | 20230420 |
| EPI_ISL_14488405 | NSP3 | hCoV-19/USA/ID-IBL-841488/2022 | E | 52 | W | 1 | 20220728 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | F | 53 | A | 11 | 20230217 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | F | 53 | E | 2 | 20230420 |
| EPI_ISL_19816608 | NSP3 | hCoV-19/South Korea/KDCA297233/2025 | F | 53 | L | 493 | 20250224 |
| EPI_ISL_17530385 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13881/2023 | F | 53 | I | 5 | 20230403 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | F | 53 | W | 2 | 20220916 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | F | 53 | M | 7 | 20220726 |
| EPI_ISL_19014042 | NSP3 | hCoV-19/Japan/7517659_S41/2024 | F | 53 | G | 5 | 20240118 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | F | 53 | R | 4 | 20240320 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | F | 53 | D | 6 | 20230406 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | F | 53 | K | 2 | 20221229 |
| EPI_ISL_8812967 | NSP3 | hCoV-19/USA/OR-TRACE-POLK-042521-1190/2021 | F | 53 | insS | 1 | 20210425 |
| EPI_ISL_19143508 | NSP3 | hCoV-19/Pakistan/GRH42618/2024 | F | 53 | V | 77 | 20240325 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | F | 53 | H | 2 | 20210915 |
| EPI_ISL_16814841 | NSP3 | hCoV-19/Spain/AS-232302587/2023 | F | 53 | S | 13 | 20230119 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | F | 53 | stop | 3 | 20210716 |
| EPI_ISL_19140715 | NSP3 | hCoV-19/Pakistan/13851203/2024 | F | 53 | del | 97 | 20240224 |
| EPI_ISL_3543396 | NSP3 | hCoV-19/USA/ID-IBL-632714/2020 | F | 53 | P | 1 | 20200721 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | F | 53 | T | 2 | 20240319 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | F | 53 | insYR | 1 | 20210809 |
| EPI_ISL_19330706 | NSP3 | hCoV-19/Japan/7530074_S20/2024 | F | 53 | C | 20 | 20240726 |
| EPI_ISL_19140718 | NSP3 | hCoV-19/Pakistan/11446874/2024 | F | 53 | N | 2 | 20240308 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | F | 53 | Y | 7 | 20230217 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | A | 54 | W | 1 | 20210118 |
| EPI_ISL_19639478 | NSP3 | hCoV-19/USA/MA-CDC-LC1126059/2024 | A | 54 | S | 593 | 20241201 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 54 | E | 1 | 20220210 |
| EPI_ISL_9805335 | NSP3 | hCoV-19/Brazil/SP-IB_150657/2022 | A | 54 | insCVVADAVVLWQKLGTEVNEFA | 3 | 20220123 |
| EPI_ISL_18936155 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00096/2023 | A | 54 | Q | 11 | 20230415 |
| EPI_ISL_8806441 | NSP3 | hCoV-19/India/GA-NCCS-212250197/2021 | A | 54 | insP | 3 | 20210813 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | A | 54 | F | 4 | 20230420 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | A | 54 | C | 13 | 20240320 |
| EPI_ISL_19782833 | NSP3 | hCoV-19/Chile/VS-ISPC-20491/2025 | A | 54 | V | 1689 | 20250306 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 54 | M | 2 | 20230217 |
| EPI_ISL_16713738 | NSP3 | hCoV-19/USA/NY-GBW-H20-279-7810/2023 | A | 54 | D | 11 | 20230121 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | A | 54 | I | 2 | 20230414 |
| EPI_ISL_19140718 | NSP3 | hCoV-19/Pakistan/11446874/2024 | A | 54 | N | 2 | 20240308 |
| EPI_ISL_19820059 | NSP3 | hCoV-19/Canada/ON-PHL-202504998/2025 | A | 54 | T | 1578 | 20250323 |
| EPI_ISL_17275338 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45863/2023 | A | 54 | K | 5 | 20230217 |
| EPI_ISL_18098343 | NSP3 | hCoV-19/Kenya/KNPHLGEN129/2022 | A | 54 | R | 6 | 20221218 |
| EPI_ISL_13812251 | NSP3 | hCoV-19/USA/ID-IBL-831278/2022 | A | 54 | P | 6 | 20220623 |
| EPI_ISL_17603204 | NSP3 | hCoV-19/Brazil/TO-LACENTO-170553953/2023 | A | 54 | G | 7 | 20230306 |
| EPI_ISL_19140715 | NSP3 | hCoV-19/Pakistan/13851203/2024 | A | 54 | del | 77 | 20240224 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | A | 54 | L | 7 | 20221228 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 54 | Y | 1 | 20221229 |
| EPI_ISL_19497182 | NSP3 | hCoV-19/Wales/CLIMB-CM7YRDJC/2024 | C | 55 | S | 329 | 20241009 |
| EPI_ISL_19832196 | NSP3 | hCoV-19/USA/MI-UM-10062785243/2025 | C | 55 | Y | 2171 | 20250307 |
| EPI_ISL_3922820 | NSP3 | hCoV-19/USA/ID-IBL-638512/2020 | C | 55 | N | 1 | 20200803 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | C | 55 | E | 2 | 20240319 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | C | 55 | D | 1 | 20210118 |
| EPI_ISL_19832968 | NSP3 | hCoV-19/Japan/FR032-0093/2025 | C | 55 | R | 408 | 20250213 |
| EPI_ISL_18098343 | NSP3 | hCoV-19/Kenya/KNPHLGEN129/2022 | C | 55 | L | 11 | 20221218 |
| EPI_ISL_19755650 | NSP3 | hCoV-19/USA/IL-RIPHL_15343_G/2025 | C | 55 | G | 40 | 20250209 |
| EPI_ISL_16802353 | NSP3 | hCoV-19/United Arab Emirates/BTC-5929/2021 | C | 55 | insCGRCCRVVADAVVLWQMLSCCGRCCGRCCRVVAEAAR | 1 | 20210624 |
| EPI_ISL_19140718 | NSP3 | hCoV-19/Pakistan/11446874/2024 | C | 55 | T | 2 | 20240308 |
| EPI_ISL_16583498 | NSP3 | hCoV-19/Austria/AGES-1101856/2023 | C | 55 | A | 19 | 20230102 |
| EPI_ISL_19821873 | NSP3 | hCoV-19/USA/AL-CDC-LC1136375/2025 | C | 55 | F | 289 | 20250326 |
| EPI_ISL_17530376 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13869/2023 | C | 55 | stop | 7 | 20230314 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | C | 55 | I | 2 | 20230420 |
| EPI_ISL_12143392 | NSP3 | hCoV-19/Puerto Rico/PR-CDC-2-5800302/2022 | C | 55 | W | 4 | 20220316 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | C | 55 | insLY | 1 | 20221228 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | C | 55 | insGRCCHK | 1 | 20210813 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | C | 55 | Q | 1 | 20230217 |
| EPI_ISL_11415707 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC73LAMS/2022 | C | 55 | insE | 1 | 20220131 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | C | 55 | P | 4 | 20210915 |
| EPI_ISL_19140715 | NSP3 | hCoV-19/Pakistan/13851203/2024 | C | 55 | del | 82 | 20240224 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 55 | V | 4 | 20220210 |
| EPI_ISL_18936155 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00096/2023 | C | 55 | K | 12 | 20230415 |
| EPI_ISL_19014042 | NSP3 | hCoV-19/Japan/7517659_S41/2024 | V | 56 | G | 4 | 20240118 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | V | 56 | P | 14 | 20220726 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | V | 56 | del | 91 | 20240320 |
| EPI_ISL_3543369 | NSP3 | hCoV-19/USA/ID-IBL-630925/2020 | V | 56 | insY | 1 | 20200714 |
| EPI_ISL_18974070 | NSP3 | hCoV-19/Russia/SPE-RII-MH167958S/2024 | V | 56 | D | 5 | 20240213 |
| EPI_ISL_19807314 | NSP3 | hCoV-19/Canada/ON-PHL-202503876/2025 | V | 56 | I | 572 | 20250208 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | V | 56 | insWQMLSstopK | 2 | 20211231 |
| EPI_ISL_19704294 | NSP3 | hCoV-19/Spain/CT-HUGTiP-D1R203/2025 | V | 56 | A | 185 | 20250116 |
| EPI_ISL_18936155 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00096/2023 | V | 56 | stop | 11 | 20230415 |
| EPI_ISL_19140718 | NSP3 | hCoV-19/Pakistan/11446874/2024 | V | 56 | Y | 1 | 20240308 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | V | 56 | K | 3 | 20220118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 56 | T | 2 | 20220210 |
| EPI_ISL_18098343 | NSP3 | hCoV-19/Kenya/KNPHLGEN129/2022 | V | 56 | C | 6 | 20221218 |
| EPI_ISL_11415666 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC32LAMS/2022 | V | 56 | E | 2 | 20220131 |
| EPI_ISL_10080760 | NSP3 | hCoV-19/India/KA-SEQ_9796_S210_R1_001/2022 | V | 56 | insVADAVVLHQRLLVLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFACV | 1 | 20220102 |
| EPI_ISL_10950962 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9339/2022 | V | 56 | H | 2 | 20220211 |
| EPI_ISL_16532278 | NSP3 | hCoV-19/Austria/AGES-1169458/2022 | V | 56 | L | 22 | 20221226 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | V | 56 | S | 2 | 20210716 |
| EPI_ISL_19663880 | NSP3 | hCoV-19/Canada/ON-PHL-202500813/2025 | V | 56 | F | 968 | 20250106 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | V | 56 | N | 2 | 20210813 |
| EPI_ISL_17715115 | NSP3 | hCoV-19/India/UP-MRU-ICMR-91/2023 | V | 56 | insT | 1 | 20230425 |
| EPI_ISL_2484317 | NSP3 | hCoV-19/Switzerland/BS-UHB-42728496/2021 | V | 57 | P | 2 | 20210306 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | V | 57 | W | 3 | 20210918 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | V | 57 | del | 85 | 20240320 |
| EPI_ISL_19348678 | NSP3 | hCoV-19/Morocco/4/2020 | V | 57 | insLFTLQMRMK | 1 | 20201206 |
| EPI_ISL_16618214 | NSP3 | hCoV-19/Italy/LOM_IZSLER_6009_3/2023 | V | 57 | M | 69 | 20230109 |
| EPI_ISL_19014042 | NSP3 | hCoV-19/Japan/7517659_S41/2024 | V | 57 | G | 5 | 20240118 |
| EPI_ISL_18823346 | NSP3 | hCoV-19/South Korea/KDCA282544/2023 | V | 57 | A | 16 | 20231226 |
| EPI_ISL_18840764 | NSP3 | hCoV-19/Canada/BC-BCCDC-694737/2023 | V | 57 | L | 96 | 20231229 |
| EPI_ISL_18098343 | NSP3 | hCoV-19/Kenya/KNPHLGEN129/2022 | V | 57 | C | 6 | 20221218 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 57 | T | 1 | 20220210 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | V | 57 | E | 2 | 20230217 |
| EPI_ISL_2484317 | NSP3 | hCoV-19/Switzerland/BS-UHB-42728496/2021 | V | 57 | insSSTVstop | 1 | 20210306 |
| EPI_ISL_16815195 | NSP3 | hCoV-19/United Arab Emirates/BTC-6188/2021 | V | 57 | insADAVVLWQMLSCCGRCCRVVADAARVVADAVVLHQRLLVLWQMLSCCGRCCRVVAEAARVV | 1 | 20210701 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | V | 57 | F | 3 | 20210813 |
| EPI_ISL_8718066 | NSP3 | hCoV-19/USA/ID-IBL-781480/2021 | V | 57 | stop | 2 | 20211216 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | V | 57 | N | 1 | 20230420 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | V | 57 | Y | 2 | 20220728 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | V | 57 | K | 2 | 20230414 |
| EPI_ISL_13812251 | NSP3 | hCoV-19/USA/ID-IBL-831278/2022 | V | 57 | I | 1 | 20220623 |
| EPI_ISL_16814955 | NSP3 | hCoV-19/United Arab Emirates/BTC-5948/2021 | V | 57 | insGRCCRVVAEAARVV | 1 | 20210624 |
| EPI_ISL_3543382 | NSP3 | hCoV-19/USA/ID-IBL-632544/2020 | V | 57 | H | 2 | 20200718 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | V | 57 | S | 1 | 20210809 |
| EPI_ISL_19708125 | NSP3 | hCoV-19/Peru/PIU-FPP05094/2023 | A | 58 | I | 2 | 20231214 |
| EPI_ISL_19140718 | NSP3 | hCoV-19/Pakistan/11446874/2024 | A | 58 | K | 5 | 20240308 |
| EPI_ISL_16802414 | NSP3 | hCoV-19/United Arab Emirates/BTC-6090/2021 | A | 58 | insDAVVLWQMLSCCGRCCRVVADAVVLHQRLLVLWQMLSCCGRCCRVVAEAARVVA | 2 | 20210626 |
| EPI_ISL_19829635 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022825_01/2025 | A | 58 | S | 1404 | 20250306 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | A | 58 | P | 2 | 20210918 |
| EPI_ISL_19351742 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242725/2024 | A | 58 | del | 74 | 20240706 |
| EPI_ISL_19795871 | NSP3 | hCoV-19/New Zealand/25YA0737/2025 | A | 58 | T | 2524 | 20250313 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | A | 58 | R | 2 | 20230131 |
| EPI_ISL_13812251 | NSP3 | hCoV-19/USA/ID-IBL-831278/2022 | A | 58 | C | 7 | 20220623 |
| EPI_ISL_19799389 | NSP3 | hCoV-19/USA/TX-HMH-M-147527/2025 | A | 58 | V | 2633 | 20250224 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | A | 58 | W | 2 | 20210915 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | A | 58 | E | 16 | 20240319 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | A | 58 | L | 8 | 20220726 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | A | 58 | Q | 2 | 20210809 |
| EPI_ISL_17530325 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13902/2023 | A | 58 | G | 16 | 20230405 |
| EPI_ISL_16802428 | NSP3 | hCoV-19/United Arab Emirates/BTC-6127/2021 | A | 58 | insEAARVVA | 3 | 20210630 |
| EPI_ISL_19140718 | NSP3 | hCoV-19/Pakistan/11446874/2024 | D | 59 | P | 6 | 20240308 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | D | 59 | stop | 3 | 20220728 |
| EPI_ISL_19692585 | NSP3 | hCoV-19/USA/MN-MDH-45448/2025 | D | 59 | E | 95 | 20250109 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | D | 59 | W | 8 | 20220726 |
| EPI_ISL_19600276 | NSP3 | hCoV-19/USA/CA-CDPH-500143261/2024 | D | 59 | Y | 131 | 20240921 |
| EPI_ISL_19703426 | NSP3 | hCoV-19/USA/NY-PRL-250128_81H11/2025 | D | 59 | G | 1184 | 20250118 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | D | 59 | M | 2 | 20210809 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | D | 59 | T | 2 | 20210813 |
| EPI_ISL_19614940 | NSP3 | hCoV-19/Russia/SPE-RII-MH210382S/2024 | D | 59 | A | 818 | 20241106 |
| EPI_ISL_19819597 | NSP3 | hCoV-19/Australia/SA2511302/2025 | D | 59 | N | 417 | 20250329 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | D | 59 | del | 65 | 20240320 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | D | 59 | K | 2 | 20210118 |
| EPI_ISL_14421689 | NSP3 | hCoV-19/India/PB-VRDLGMCPTA-ICMR-INSACOG-GS000076/2022 | D | 59 | V | 19 | 20220622 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | D | 59 | L | 1 | 20210809 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | D | 59 | S | 8 | 20230420 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | D | 59 | Q | 3 | 20230131 |
| EPI_ISL_17530325 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13902/2023 | D | 59 | R | 14 | 20230405 |
| EPI_ISL_13812251 | NSP3 | hCoV-19/USA/ID-IBL-831278/2022 | D | 59 | H | 3 | 20220623 |
| EPI_ISL_19470748 | NSP3 | hCoV-19/Canada/ON-PHL-202415810/2024 | D | 59 | B | 11 | 20240930 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | A | 60 | del | 66 | 20240320 |
| EPI_ISL_17530325 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13902/2023 | A | 60 | C | 15 | 20230405 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 60 | L | 5 | 20220210 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | A | 60 | Q | 12 | 20220726 |
| EPI_ISL_3922796 | NSP3 | hCoV-19/USA/ID-IBL-635961/2020 | A | 60 | R | 2 | 20200727 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | A | 60 | M | 3 | 20230131 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 60 | N | 1 | 20221229 |
| EPI_ISL_19813267 | NSP3 | hCoV-19/Japan/FR085-0010/2025 | A | 60 | V | 2020 | 20250321 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | A | 60 | E | 1 | 20220210 |
| EPI_ISL_19808334 | NSP3 | hCoV-19/Canada/ON-PHL-202504694/2025 | A | 60 | T | 425 | 20250303 |
| EPI_ISL_3556832 | NSP3 | hCoV-19/USA/ID-IBL-631302/2020 | A | 60 | F | 1 | 20200715 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | A | 60 | K | 8 | 20230420 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | A | 60 | P | 12 | 20240319 |
| EPI_ISL_10197012 | NSP3 | hCoV-19/India/DL-AIIMS-COVTN64272/2022 | A | 60 | insRVVA | 1 | 20220103 |
| EPI_ISL_16802422 | NSP3 | hCoV-19/United Arab Emirates/BTC-6116/2021 | A | 60 | insVVLWQMLSCCGRCCRVVADAVVLRQMLSCCGRCCRVVAEAARVVADA | 1 | 20210628 |
| EPI_ISL_7825018 | NSP3 | hCoV-19/India/MH-IISER-Pune-IP02292/2021 | A | 60 | insRVVAD | 1 | 20210823 |
| EPI_ISL_15450230 | NSP3 | hCoV-19/Germany/BW-RKI-I-1003340/2022 | A | 60 | insG | 6 | 20221011 |
| EPI_ISL_14200377 | NSP3 | hCoV-19/France/IDF-LBZCentre-I2202210053/2022 | A | 60 | G | 10 | 20220221 |
| EPI_ISL_16802461 | NSP3 | hCoV-19/United Arab Emirates/BTC-6210/2021 | A | 60 | insARVVADAVVLWQ | 2 | 20210701 |
| EPI_ISL_18947044 | NSP3 | hCoV-19/Canada/MB-CPL-675875/2023 | A | 60 | D | 40 | 20231120 |
| EPI_ISL_19598067 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-144310/2024 | A | 60 | S | 435 | 20241115 |
| EPI_ISL_19140718 | NSP3 | hCoV-19/Pakistan/11446874/2024 | A | 60 | I | 3 | 20240308 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | A | 60 | insH | 1 | 20230414 |
| EPI_ISL_15270450 | NSP3 | hCoV-19/Egypt/CPHL-EGY22219/2022 | V | 61 | insVLWQMLSCCGRC | 1 | 20220303 |
| EPI_ISL_16815136 | NSP3 | hCoV-19/United Arab Emirates/BTC-6050/2021 | V | 61 | insVLWQRLLVLWQMLSCCGRCCRVVADAVVLWQ | 1 | 20210619 |
| EPI_ISL_19792983 | NSP3 | hCoV-19/USA/NY-PRL-250318_81F08/2025 | V | 61 | A | 265 | 20250306 |
| EPI_ISL_3556844 | NSP3 | hCoV-19/USA/ID-IBL-633079/2020 | V | 61 | P | 1 | 20200721 |
| EPI_ISL_15450230 | NSP3 | hCoV-19/Germany/BW-RKI-I-1003340/2022 | V | 61 | F | 28 | 20221011 |
| EPI_ISL_16802403 | NSP3 | hCoV-19/United Arab Emirates/BTC-6057/2021 | V | 61 | insVLWQMLSCCGRGCSCCGDAV | 1 | 20210621 |
| EPI_ISL_17832082 | NSP3 | hCoV-19/Mexico/CMX-INMEGEN-105-11/2023 | V | 61 | insVLWQ | 69 | 20230518 |
| EPI_ISL_19140718 | NSP3 | hCoV-19/Pakistan/11446874/2024 | V | 61 | stop | 1 | 20240308 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | V | 61 | T | 1 | 20230414 |
| EPI_ISL_10739369 | NSP3 | hCoV-19/Thailand/NIC_NBI_SEQ6030/2022 | V | 61 | insVLWQMLSCCGRCCRVVADAVVLWQ | 62 | 20220122 |
| EPI_ISL_16815185 | NSP3 | hCoV-19/United Arab Emirates/BTC-6163/2021 | V | 61 | insVLWQMLSCCGDAV | 1 | 20210702 |
| EPI_ISL_16802458 | NSP3 | hCoV-19/United Arab Emirates/BTC-6204/2021 | V | 61 | insVLWQMLSCCGRCCRVASEAARVVADAVVLWQMLSCCGRCCRVVADAV | 1 | 20210702 |
| EPI_ISL_16815148 | NSP3 | hCoV-19/United Arab Emirates/BTC-6074/2021 | V | 61 | insVLWQMLSCCG | 2 | 20210624 |
| EPI_ISL_14680716 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-1402HAV070/2022 | V | 61 | insR | 2 | 20220204 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | V | 61 | H | 1 | 20240316 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | V | 61 | Y | 6 | 20230420 |
| EPI_ISL_9476322 | NSP3 | hCoV-19/Brazil/SP-IB_149768/2022 | V | 61 | insVLWQMLSCCGRGCRVVADAV | 1 | 20220119 |
| EPI_ISL_18743631 | NSP3 | hCoV-19/USA/TX-HMH-M-136711/2023 | V | 61 | G | 3 | 20231222 |
| EPI_ISL_16814974 | NSP3 | hCoV-19/United Arab Emirates/BTC-5453/2021 | V | 61 | insMCCGRCCHVLWQMLSCVVAEAARVVADAV | 1 | 20210529 |
| EPI_ISL_16802512 | NSP3 | hCoV-19/United Arab Emirates/BTC-6318/2021 | V | 61 | insVLWQMLSCCGRGCSCCG | 1 | 20210708 |
| EPI_ISL_17530325 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13902/2023 | V | 61 | C | 18 | 20230405 |
| EPI_ISL_16802503 | NSP3 | hCoV-19/United Arab Emirates/BTC-6293/2021 | V | 61 | insVLWQMLSCCGRCCRVVADAVVLWQMLSCCGRCCRVVADAV | 1 | 20210708 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | V | 61 | L | 20 | 20240319 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | V | 61 | S | 2 | 20210809 |
| EPI_ISL_16802388 | NSP3 | hCoV-19/United Arab Emirates/BTC-6000/2021 | V | 61 | insVLWQMLSCCGRCCRVVAEAARVVADAARVVAEAARVVADAV | 1 | 20210624 |
| EPI_ISL_16814941 | NSP3 | hCoV-19/United Arab Emirates/BTC-5836/2021 | V | 61 | insVLWQMLSCCGRCCRVVADAARVVAEAARVVADAV | 2 | 20210618 |
| EPI_ISL_16802408 | NSP3 | hCoV-19/United Arab Emirates/BTC-6076/2021 | V | 61 | insVLWQRLLVLWQ | 1 | 20210619 |
| EPI_ISL_16815052 | NSP3 | hCoV-19/United Arab Emirates/BTC-5802/2021 | V | 61 | insVLWQMLSCCGRCCRVASEAARVVADAV | 1 | 20210617 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 61 | E | 2 | 20220210 |
| EPI_ISL_16815259 | NSP3 | hCoV-19/United Arab Emirates/BTC-6326/2021 | V | 61 | insVLWQMLSCCGRCCRVVADAARVVADAV | 15 | 20210708 |
| EPI_ISL_19784487 | NSP3 | hCoV-19/Australia/QLD0x015352/2025 | V | 61 | I | 2427 | 20250301 |
| EPI_ISL_19706144 | NSP3 | hCoV-19/South Korea/KDCA296819/2024 | V | 61 | D | 2 | 20241228 |
| EPI_ISL_17162470 | NSP3 | hCoV-19/Zambia/CHAZ-CHS2975/2023 | V | 61 | insVLWQMLSCCGRCCRVVAEAARVVADAV | 17 | 20230116 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | V | 61 | del | 21 | 20240320 |
| EPI_ISL_16815228 | NSP3 | hCoV-19/United Arab Emirates/BTC-6249/2021 | V | 61 | insVLWQRLL | 2 | 20210701 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 61 | M | 8 | 20221229 |
| EPI_ISL_16802392 | NSP3 | hCoV-19/United Arab Emirates/BTC-6007/2021 | V | 61 | insVLWQMLSCCGRCCRVVADAV | 3 | 20210624 |
| EPI_ISL_14679069 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-S-11740/2022 | V | 61 | insRVVAEAARVVADAV | 1 | 20220111 |
| EPI_ISL_16802472 | NSP3 | hCoV-19/United Arab Emirates/BTC-6244/2021 | V | 61 | insVLWQMLSCCGRGCSCCGRCCRVVADAV | 1 | 20210701 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | V | 61 | R | 3 | 20220728 |
| EPI_ISL_16815051 | NSP3 | hCoV-19/United Arab Emirates/BTC-5798/2021 | V | 61 | insVLWQMLSCCGRCCRVVAEAARVVADAVVLWQMLSCWADAV | 1 | 20210617 |
| EPI_ISL_16815100 | NSP3 | hCoV-19/United Arab Emirates/BTC-5960/2021 | V | 61 | insVLWQMLSCCGRCCRVVADAVVLRQRLLVLWQMLSCCGRCCRVVADAV | 1 | 20210624 |
| EPI_ISL_14680594 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-1402HAV055/2022 | V | 61 | insVLWQMLSCCRVVADAV | 1 | 20220203 |
| EPI_ISL_16802215 | NSP3 | hCoV-19/United Arab Emirates/BTC-5467/2021 | V | 61 | insVLWQMLSCCGRCCSCCGRCCRVVAEAARVVADAV | 1 | 20210529 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | V | 61 | K | 1 | 20210118 |
| EPI_ISL_9476513 | NSP3 | hCoV-19/Brazil/SP-IB_149964/2022 | V | 61 | insEVNEFACVVADAV | 1 | 20220117 |
| EPI_ISL_19829444 | NSP3 | hCoV-19/Brazil/PB-IEC-010995/2025 | I | 62 | M | 720 | 20250211 |
| EPI_ISL_19742611 | NSP3 | hCoV-19/Chile/CO-9617/2025 | I | 62 | T | 669 | 20250129 |
| EPI_ISL_19130315 | NSP3 | hCoV-19/South Korea/KDCA292469/2024 | I | 62 | R | 7 | 20240415 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | I | 62 | Q | 46 | 20240316 |
| EPI_ISL_17974476 | NSP3 | hCoV-19/Finland/THL-05946/2023 | I | 62 | K | 78 | 20230610 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | I | 62 | D | 2 | 20230213 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | I | 62 | del | 19 | 20240320 |
| EPI_ISL_984291 | NSP3 | hCoV-19/Belgium/UZA-UA-2529/2021 | I | 62 | N | 3 | 20210201 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | I | 62 | Y | 1 | 20210809 |
| EPI_ISL_12146075 | NSP3 | hCoV-19/Turkey/HSGM-GS1549/2022 | I | 62 | A | 2 | 20220401 |
| EPI_ISL_19646440 | NSP3 | hCoV-19/France/PAC-RELAB-HCL024197604101/2024 | I | 62 | V | 4802 | 20241210 |
| EPI_ISL_13847056 | NSP3 | hCoV-19/France/GES-HMN-22062270608/2022 | I | 62 | insLWQX | 10 | 20220620 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | I | 62 | S | 3 | 20210915 |
| EPI_ISL_8716384 | NSP3 | hCoV-19/Israel/ICH-741111314/2022 | I | 62 | insLHQRLLVLWQMLSCCX | 1 | 20220105 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 62 | E | 2 | 20210318 |
| EPI_ISL_18743631 | NSP3 | hCoV-19/USA/TX-HMH-M-136711/2023 | I | 62 | C | 3 | 20231222 |
| EPI_ISL_15117203 | NSP3 | hCoV-19/Brazil/GO-NVBS24078GENOV700802044447/2022 | I | 62 | insCCGR | 2 | 20220801 |
| EPI_ISL_14680239 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-S-10859/2021 | I | 62 | insLWQMLSCCGR | 7 | 20211227 |
| EPI_ISL_626569 | NSP3 | hCoV-19/Mongolia/29432/2020 | I | 62 | insSstop | 2 | 20200812 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | I | 62 | G | 3 | 20230420 |
| EPI_ISL_9304735 | NSP3 | hCoV-19/Brazil/SP-IB_148850/2022 | I | 62 | insLWQMLSCCGRCC | 1 | 20220114 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | I | 62 | insstop | 3 | 20210915 |
| EPI_ISL_1212933 | NSP3 | hCoV-19/Germany/NI-RKI-I-029783/2021 | I | 62 | insLWQRLLVLWQX | 1 | 20210301 |
| EPI_ISL_9476311 | NSP3 | hCoV-19/Brazil/SP-IB_149757/2022 | I | 62 | insLWQMLSCCG | 2 | 20220114 |
| EPI_ISL_17530325 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13902/2023 | I | 62 | H | 13 | 20230405 |
| EPI_ISL_11855326 | NSP3 | hCoV-19/Sweden/461847739726/2021 | I | 62 | insCCGRCCHVLWQMLS | 1 | 20211203 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | I | 62 | insH | 1 | 20200626 |
| EPI_ISL_626626 | NSP3 | hCoV-19/Mongolia/3624/2020 | I | 62 | W | 3 | 20200321 |
| EPI_ISL_18939961 | NSP3 | hCoV-19/France/OCC-ChuMtp-99240322629/2024 | I | 62 | L | 316 | 20240201 |
| EPI_ISL_13894519 | NSP3 | hCoV-19/Israel/CVL-8008307/2022 | I | 62 | J | 60 | 20220708 |
| EPI_ISL_5934824 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689492_CAM_IZSM_COLLI_TIGEM/2021 | I | 62 | insLW | 3 | 20211015 |
| EPI_ISL_10511969 | NSP3 | hCoV-19/Thailand/NIC_BKK_SEQ1894/2022 | I | 62 | stop | 10 | 20220105 |
| EPI_ISL_626626 | NSP3 | hCoV-19/Mongolia/3624/2020 | I | 62 | insQMLSstop | 3 | 20200321 |
| EPI_ISL_12450794 | NSP3 | hCoV-19/USA/NY-PRL_0422_00J15/2022 | K | 63 | T | 14 | 20220421 |
| EPI_ISL_11755374 | NSP3 | hCoV-19/Thailand/NIC_SSK_SEQ12257/2022 | K | 63 | B | 2 | 20220306 |
| EPI_ISL_19348678 | NSP3 | hCoV-19/Morocco/4/2020 | K | 63 | insKKSLSHQL | 1 | 20201206 |
| EPI_ISL_19750838 | NSP3 | hCoV-19/Japan/FR021-0099/2025 | K | 63 | R | 541 | 20250127 |
| EPI_ISL_19417423 | NSP3 | hCoV-19/Canada/ON-PHL-202413812/2024 | K | 63 | E | 500 | 20240910 |
| EPI_ISL_8812970 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-102921-1222/2021 | K | 63 | W | 1 | 20211029 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | K | 63 | P | 2 | 20240316 |
| EPI_ISL_3922796 | NSP3 | hCoV-19/USA/ID-IBL-635961/2020 | K | 63 | H | 1 | 20200727 |
| EPI_ISL_3543441 | NSP3 | hCoV-19/USA/ID-IBL-637585/2020 | K | 63 | insstopKL | 1 | 20200731 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | K | 63 | S | 5 | 20220726 |
| EPI_ISL_1909249 | NSP3 | hCoV-19/Morocco/FMP-284/2021 | K | 63 | F | 1 | 20210416 |
| EPI_ISL_16468263 | NSP3 | hCoV-19/England/QEUH-326844AF/2022 | K | 63 | stop | 10 | 20221229 |
| EPI_ISL_18958771 | NSP3 | hCoV-19/USA/MO-MSPHL-009394/2023 | K | 63 | N | 46 | 20231111 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | K | 63 | A | 2 | 20230217 |
| EPI_ISL_18327930 | NSP3 | hCoV-19/USA/CA-HLX-STM-BSCTC5NFQ/2023 | K | 63 | Q | 30 | 20230911 |
| EPI_ISL_9873638 | NSP3 | hCoV-19/Thailand/NIC_BKK_SEQ25506/2021 | K | 63 | D | 1 | 20211231 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | K | 63 | V | 7 | 20230414 |
| EPI_ISL_18269226 | NSP3 | hCoV-19/USA/CA_SACPHL_23SAC0147/2023 | K | 63 | I | 6 | 20230817 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | K | 63 | del | 50 | 20240320 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | K | 63 | L | 4 | 20220901 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | K | 63 | G | 5 | 20240319 |
| EPI_ISL_9476306 | NSP3 | hCoV-19/Brazil/SP-IB_149954/2022 | T | 64 | W | 2 | 20220118 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | T | 64 | C | 2 | 20210809 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | T | 64 | insGHstop | 1 | 20210809 |
| EPI_ISL_9476311 | NSP3 | hCoV-19/Brazil/SP-IB_149757/2022 | T | 64 | G | 3 | 20220114 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 64 | Y | 7 | 20220210 |
| EPI_ISL_6849243 | NSP3 | hCoV-19/Thailand/TRG_SEQ20153/2021 | T | 64 | E | 1 | 20211105 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | T | 64 | L | 21 | 20240316 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | T | 64 | Q | 2 | 20230131 |
| EPI_ISL_11887839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0814/2022 | T | 64 | K | 1 | 20220122 |
| EPI_ISL_19819594 | NSP3 | hCoV-19/Australia/SA2507532/2025 | T | 64 | I | 10105 | 20250326 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 64 | P | 3 | 20220210 |
| EPI_ISL_18743631 | NSP3 | hCoV-19/USA/TX-HMH-M-136711/2023 | T | 64 | V | 5 | 20231222 |
| EPI_ISL_18936256 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00164/2023 | T | 64 | stop | 47 | 20230422 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | T | 64 | del | 58 | 20240320 |
| EPI_ISL_19450800 | NSP3 | hCoV-19/England/CLIMB-CM7YETT1/2024 | T | 64 | A | 93 | 20240920 |
| EPI_ISL_19362600 | NSP3 | hCoV-19/USA/CA-LACPHL-AY07941/2024 | T | 64 | N | 116 | 20240809 |
| EPI_ISL_7853197 | NSP3 | hCoV-19/Mexico/JAL_LANGEBIO_IMSS_3977/2021 | T | 64 | M | 24 | 20211124 |
| EPI_ISL_8718066 | NSP3 | hCoV-19/USA/ID-IBL-781480/2021 | T | 64 | F | 3 | 20211216 |
| EPI_ISL_13782759 | NSP3 | hCoV-19/Paraguay/465809/2022 | T | 64 | S | 15 | 20220519 |
| EPI_ISL_3556844 | NSP3 | hCoV-19/USA/ID-IBL-633079/2020 | T | 64 | insS | 1 | 20200721 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | L | 65 | T | 1 | 20230213 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | L | 65 | insHL | 1 | 20210801 |
| EPI_ISL_3242922 | NSP3 | hCoV-19/USA/ID-IBL-640883/2020 | L | 65 | K | 2 | 20200809 |
| EPI_ISL_13692802 | NSP3 | hCoV-19/Finland/THL-202214797/2022 | L | 65 | stop | 3 | 20220611 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | L | 65 | Q | 3 | 20220901 |
| EPI_ISL_8718066 | NSP3 | hCoV-19/USA/ID-IBL-781480/2021 | L | 65 | A | 1 | 20211216 |
| EPI_ISL_5881201 | NSP3 | hCoV-19/Thailand/Chai Nat_SEQ19115/2021 | L | 65 | R | 3 | 20211018 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | L | 65 | E | 3 | 20230420 |
| EPI_ISL_11449560 | NSP3 | hCoV-19/Thailand/NIC_BKK_FRS737/2022 | L | 65 | Y | 5 | 20220217 |
| EPI_ISL_18743631 | NSP3 | hCoV-19/USA/TX-HMH-M-136711/2023 | L | 65 | F | 86 | 20231222 |
| EPI_ISL_15036069 | NSP3 | hCoV-19/Philippines/PH-VUI-126529/2022 | L | 65 | S | 4 | 20220818 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | L | 65 | del | 51 | 20240320 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | L | 65 | P | 1 | 20240319 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 65 | G | 2 | 20220210 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | L | 65 | C | 14 | 20220727 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | L | 65 | H | 1 | 20240316 |
| EPI_ISL_15162758 | NSP3 | hCoV-19/India/MH-NCCS-589147419/2021 | L | 65 | I | 3 | 20211201 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | L | 65 | W | 10 | 20230925 |
| EPI_ISL_17372599 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2616/2023 | L | 65 | M | 52 | 20230113 |
| EPI_ISL_3923091 | NSP3 | hCoV-19/USA/ID-IBL-749073/2021 | L | 65 | insG | 1 | 20210813 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | L | 65 | insA | 1 | 20210806 |
| EPI_ISL_14584723 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-16698/2022 | L | 65 | V | 13 | 20220809 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | L | 65 | N | 2 | 20230217 |
| EPI_ISL_11739701 | NSP3 | hCoV-19/Thailand/NIC_SSK_SEQ12262/2022 | Q | 66 | J | 1 | 20220228 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | Q | 66 | del | 41 | 20240320 |
| EPI_ISL_11755374 | NSP3 | hCoV-19/Thailand/NIC_SSK_SEQ12257/2022 | Q | 66 | I | 2 | 20220306 |
| EPI_ISL_13812251 | NSP3 | hCoV-19/USA/ID-IBL-831278/2022 | Q | 66 | S | 50 | 20220623 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 66 | T | 3 | 20220210 |
| EPI_ISL_19081797 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y87EQ/2024 | Q | 66 | L | 124 | 20240409 |
| EPI_ISL_18743631 | NSP3 | hCoV-19/USA/TX-HMH-M-136711/2023 | Q | 66 | M | 4 | 20231222 |
| EPI_ISL_19528159 | NSP3 | hCoV-19/USA/NY-CDC-LC1124663/2024 | Q | 66 | Z | 6 | 20241025 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | Q | 66 | Y | 2 | 20210813 |
| EPI_ISL_19684101 | NSP3 | hCoV-19/USA/CO-CDPHE-42779368/2025 | Q | 66 | E | 275 | 20250108 |
| EPI_ISL_19719072 | NSP3 | hCoV-19/env/Germany/BY-LGL-6469113/2024 | Q | 66 | R | 185 | 20241209 |
| EPI_ISL_18936159 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00106/2023 | Q | 66 | insFY | 1 | 20230414 |
| EPI_ISL_18806374 | NSP3 | hCoV-19/Canada/BC-BCCDC-691941/2024 | Q | 66 | stop | 14 | 20240105 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | Q | 66 | N | 15 | 20220727 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | Q | 66 | V | 3 | 20240319 |
| EPI_ISL_19407207 | NSP3 | hCoV-19/USA/IL-S24WGS0452/2024 | Q | 66 | K | 116 | 20240323 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | Q | 66 | F | 1 | 20220726 |
| EPI_ISL_17530325 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13902/2023 | Q | 66 | A | 16 | 20230405 |
| EPI_ISL_12308598 | NSP3 | hCoV-19/Russia/RYA-CRIE-7725530639/2022 | Q | 66 | P | 2 | 20220128 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | Q | 66 | G | 2 | 20230217 |
| EPI_ISL_19633157 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6928/2024 | Q | 66 | H | 61 | 20240903 |
| EPI_ISL_3556844 | NSP3 | hCoV-19/USA/ID-IBL-633079/2020 | P | 67 | insS | 1 | 20200721 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | P | 67 | stop | 2 | 20210809 |
| EPI_ISL_18787687 | NSP3 | hCoV-19/Canada/AB-ABPHL-112507/2024 | P | 67 | T | 88 | 20240103 |
| EPI_ISL_19161504 | NSP3 | hCoV-19/South Korea/KDCA293139/2024 | P | 67 | Q | 51 | 20240430 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | P | 67 | C | 5 | 20240319 |
| EPI_ISL_3543441 | NSP3 | hCoV-19/USA/ID-IBL-637585/2020 | P | 67 | G | 1 | 20200731 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | P | 67 | del | 91 | 20240320 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | P | 67 | F | 1 | 20240316 |
| EPI_ISL_12754233 | NSP3 | hCoV-19/USA/MS-MSPHL-203/2021 | P | 67 | K | 1 | 20210817 |
| EPI_ISL_15439817 | NSP3 | hCoV-19/Germany/BW-RKI-I-992692/2022 | P | 67 | R | 13 | 20220912 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | P | 67 | H | 4 | 20220118 |
| EPI_ISL_17715087 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-78/2023 | P | 67 | insA | 1 | 20230425 |
| EPI_ISL_9476311 | NSP3 | hCoV-19/Brazil/SP-IB_149757/2022 | P | 67 | V | 3 | 20220114 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | P | 67 | M | 9 | 20220307 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | P | 67 | Y | 1 | 20210801 |
| EPI_ISL_19800180 | NSP3 | hCoV-19/Japan/FR048-0072/2025 | P | 67 | A | 22 | 20250226 |
| EPI_ISL_3543368 | NSP3 | hCoV-19/USA/ID-IBL-630916/2020 | P | 67 | insstop | 1 | 20200714 |
| EPI_ISL_19784559 | NSP3 | hCoV-19/Australia/QLD0x0152F5/2025 | P | 67 | S | 2154 | 20250219 |
| EPI_ISL_19806333 | NSP3 | hCoV-19/Canada/ON-HRL-20251018767457-v1/2025 | P | 67 | L | 4116 | 20250215 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | V | 68 | del | 70 | 20230415 |
| EPI_ISL_18098343 | NSP3 | hCoV-19/Kenya/KNPHLGEN129/2022 | V | 68 | S | 12 | 20221218 |
| EPI_ISL_19764070 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56430/2025 | V | 68 | I | 385 | 20250213 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | V | 68 | E | 2 | 20240316 |
| EPI_ISL_18823346 | NSP3 | hCoV-19/South Korea/KDCA282544/2023 | V | 68 | G | 12 | 20231226 |
| EPI_ISL_12881767 | NSP3 | hCoV-19/USA/MA-MGB-06158/2022 | V | 68 | M | 3 | 20220505 |
| EPI_ISL_5309848 | NSP3 | hCoV-19/Sweden/UUH-000200140149/2021 | V | 68 | insXXXXXXXX | 1 | 20210826 |
| EPI_ISL_19481142 | NSP3 | hCoV-19/Japan/FR032-0209/2024 | V | 68 | L | 310 | 20240826 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | V | 68 | W | 4 | 20220118 |
| EPI_ISL_19449430 | NSP3 | hCoV-19/USA/CA-SEARCH-142021/2024 | V | 68 | A | 461 | 20240817 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | V | 68 | H | 1 | 20240320 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | V | 68 | C | 13 | 20220124 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | V | 68 | T | 9 | 20220726 |
| EPI_ISL_14333795 | NSP3 | hCoV-19/USA/ID-IBL-839632/2022 | V | 68 | Y | 12 | 20220725 |
| EPI_ISL_2445020 | NSP3 | hCoV-19/USA/AZ-ASPHL-2278/2020 | S | 69 | insCCGRstop | 1 | 20200718 |
| EPI_ISL_3543441 | NSP3 | hCoV-19/USA/ID-IBL-637585/2020 | S | 69 | R | 1 | 20200731 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | S | 69 | stop | 5 | 20220727 |
| EPI_ISL_13183054 | NSP3 | hCoV-19/Belgium/UGent-3984/2022 | S | 69 | H | 1 | 20220517 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | S | 69 | V | 1 | 20220728 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | S | 69 | E | 1 | 20240316 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | S | 69 | N | 6 | 20221229 |
| EPI_ISL_18936163 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00114/2023 | S | 69 | del | 20 | 20230417 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | S | 69 | insstop | 1 | 20210803 |
| EPI_ISL_5433623 | NSP3 | hCoV-19/Sweden/UUH-000200008574/2021 | S | 69 | insXXXXXXHW | 1 | 20210513 |
| EPI_ISL_19334603 | NSP3 | hCoV-19/Egypt/CPHL-EGY24159/2024 | S | 69 | T | 27 | 20240625 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | S | 69 | Q | 2 | 20220210 |
| EPI_ISL_14333795 | NSP3 | hCoV-19/USA/ID-IBL-839632/2022 | S | 69 | L | 14 | 20220725 |
| EPI_ISL_5934824 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689492_CAM_IZSM_COLLI_TIGEM/2021 | S | 69 | G | 5 | 20211015 |
| EPI_ISL_18823616 | NSP3 | hCoV-19/South Korea/KDCA282832/2024 | S | 69 | P | 179 | 20240103 |
| EPI_ISL_18098343 | NSP3 | hCoV-19/Kenya/KNPHLGEN129/2022 | S | 69 | I | 8 | 20221218 |
| EPI_ISL_3556823 | NSP3 | hCoV-19/USA/ID-IBL-631022/2020 | S | 69 | D | 1 | 20200714 |
| EPI_ISL_19716839 | NSP3 | hCoV-19/USA/NJ-CDC-LC1130037/2025 | S | 69 | A | 392 | 20250123 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | S | 69 | insYLHHW | 1 | 20220128 |
| EPI_ISL_9476308 | NSP3 | hCoV-19/Brazil/SP-IB_149951/2022 | S | 69 | W | 16 | 20220120 |
| EPI_ISL_19799491 | NSP3 | hCoV-19/USA/TX-HMH-M-147434/2025 | S | 69 | F | 2233 | 20250202 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | S | 69 | K | 7 | 20240320 |
| EPI_ISL_19513527 | NSP3 | hCoV-19/Sweden/O-2024-GX-3616/2024 | S | 69 | Y | 129 | 20240808 |
| EPI_ISL_19603438 | NSP3 | hCoV-19/Chile/VS-93733/2024 | S | 69 | C | 31 | 20241124 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | E | 70 | T | 1 | 20210118 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | E | 70 | del | 34 | 20240710 |
| EPI_ISL_5309844 | NSP3 | hCoV-19/Sweden/UUH-000200131504/2021 | E | 70 | insXXLHHWA | 1 | 20210826 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | E | 70 | F | 1 | 20220727 |
| EPI_ISL_19668218 | NSP3 | hCoV-19/USA/NJ-CDC-QDX28607915/2024 | E | 70 | A | 311 | 20241226 |
| EPI_ISL_10549924 | NSP3 | hCoV-19/England/NEWC-374952A/2022 | E | 70 | Z | 2 | 20220216 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | E | 70 | N | 25 | 20240320 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | E | 70 | I | 6 | 20220726 |
| EPI_ISL_18263311 | NSP3 | hCoV-19/India/WB-INSACOG-1930600513295/2023 | E | 70 | Q | 43 | 20230517 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | E | 70 | H | 1 | 20210813 |
| EPI_ISL_8806967 | NSP3 | hCoV-19/India/GA-NCCS-212690329/2021 | E | 70 | Y | 2 | 20210926 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | E | 70 | P | 43 | 20210419 |
| EPI_ISL_18913672 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000103301/2024 | E | 70 | G | 163 | 20240130 |
| EPI_ISL_19449334 | NSP3 | hCoV-19/USA/CA-SEARCH-141890/2024 | E | 70 | K | 139 | 20240809 |
| EPI_ISL_18833807 | NSP3 | hCoV-19/Ireland/G-GUH-N2245/2024 | E | 70 | V | 43 | 20240108 |
| EPI_ISL_18103688 | NSP3 | hCoV-19/Malaysia/TIDREC-NSC2799/2023 | E | 70 | stop | 20 | 20230510 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | E | 70 | S | 2 | 20230405 |
| EPI_ISL_9873638 | NSP3 | hCoV-19/Thailand/NIC_BKK_SEQ25506/2021 | E | 70 | R | 4 | 20211231 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | E | 70 | M | 1 | 20210809 |
| EPI_ISL_19358412 | NSP3 | hCoV-19/USA/NY-Wadsworth-24050225-01/2024 | E | 70 | D | 257 | 20240810 |
| EPI_ISL_10497762 | NSP3 | hCoV-19/USA/CO-CDC-2-5571228/2022 | L | 71 | J | 5 | 20220119 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | L | 71 | E | 3 | 20240316 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | L | 71 | del | 32 | 20240710 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 71 | D | 1 | 20220210 |
| EPI_ISL_18157916 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-SG-510/2023 | L | 71 | stop | 10 | 20230803 |
| EPI_ISL_17182120 | NSP3 | hCoV-19/USA/TX-HMH-M-126102/2023 | L | 71 | Y | 30 | 20230221 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 71 | T | 3 | 20221229 |
| EPI_ISL_19563104 | NSP3 | hCoV-19/Netherlands/GE-RIVM-143588/2024 | L | 71 | V | 81 | 20241025 |
| EPI_ISL_9476311 | NSP3 | hCoV-19/Brazil/SP-IB_149757/2022 | L | 71 | A | 7 | 20220114 |
| EPI_ISL_19806473 | NSP3 | hCoV-19/Canada/ON-HSC-202500957-v1/2025 | L | 71 | S | 170 | 20250122 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 71 | N | 1 | 20210318 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | L | 71 | I | 31 | 20230405 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | L | 71 | M | 23 | 20230415 |
| EPI_ISL_3556837 | NSP3 | hCoV-19/USA/ID-IBL-632716/2020 | L | 71 | insT | 1 | 20200721 |
| EPI_ISL_19366181 | NSP3 | hCoV-19/USA/TX-HMH-M-144763/2024 | L | 71 | F | 35 | 20240813 |
| EPI_ISL_11907644 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-23/2022 | L | 71 | C | 1 | 20220207 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 71 | P | 2 | 20220210 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | L | 71 | K | 8 | 20220307 |
| EPI_ISL_19747260 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YEEGP/2025 | L | 72 | J | 4 | 20250121 |
| EPI_ISL_17521499 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2069/2023 | L | 72 | T | 21 | 20230330 |
| EPI_ISL_10944013 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8941/2022 | L | 72 | G | 2 | 20220209 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | L | 72 | K | 1 | 20221224 |
| EPI_ISL_19805248 | NSP3 | hCoV-19/Russia/SPE-RII-MH229763S/2025 | L | 72 | V | 13 | 20250311 |
| EPI_ISL_5934793 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702444256_CAM_IZSM_COLLI_TIGEM/2021 | L | 72 | Q | 2 | 20211014 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | L | 72 | A | 9 | 20240320 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | L | 72 | insFRstop | 1 | 20210701 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | L | 72 | R | 4 | 20230415 |
| EPI_ISL_3556823 | NSP3 | hCoV-19/USA/ID-IBL-631022/2020 | L | 72 | S | 1 | 20200714 |
| EPI_ISL_19747277 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGYA9/2025 | L | 72 | I | 220 | 20250129 |
| EPI_ISL_2157876 | NSP3 | hCoV-19/Turkey/HSGM-11135/2021 | L | 72 | insL | 1 | 20210311 |
| EPI_ISL_19778956 | NSP3 | hCoV-19/South Korea/KDCA297079/2025 | L | 72 | F | 2329 | 20250207 |
| EPI_ISL_13318545 | NSP3 | hCoV-19/Canada/BC-BCCDC-436862/2022 | L | 72 | H | 6 | 20220509 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | L | 72 | C | 5 | 20240316 |
| EPI_ISL_17441554 | NSP3 | hCoV-19/Netherlands/LI-MUMC-7298/2023 | L | 72 | P | 8 | 20230315 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 72 | Y | 4 | 20220210 |
| EPI_ISL_19366181 | NSP3 | hCoV-19/USA/TX-HMH-M-144763/2024 | L | 72 | del | 50 | 20240813 |
| EPI_ISL_13574316 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2537/2022 | T | 73 | L | 3 | 20220609 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | T | 73 | E | 1 | 20210118 |
| EPI_ISL_14086217 | NSP3 | hCoV-19/Bahrain/22970064629/2022 | T | 73 | R | 4 | 20220213 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | T | 73 | insS | 1 | 20220726 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | T | 73 | del | 71 | 20240118 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | T | 73 | C | 5 | 20220307 |
| EPI_ISL_3242922 | NSP3 | hCoV-19/USA/ID-IBL-640883/2020 | T | 73 | insY | 1 | 20200809 |
| EPI_ISL_9191019 | NSP3 | hCoV-19/Chile/RM-199381/2021 | T | 73 | V | 12 | 20211228 |
| EPI_ISL_18990726 | NSP3 | hCoV-19/Canada/ON-KHS-01530-v1/2024 | T | 73 | K | 65 | 20240308 |
| EPI_ISL_19192488 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16006/2024 | T | 73 | P | 14 | 20240315 |
| EPI_ISL_14333795 | NSP3 | hCoV-19/USA/ID-IBL-839632/2022 | T | 73 | H | 11 | 20220725 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | T | 73 | D | 3 | 20240316 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | T | 73 | S | 25 | 20230415 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | T | 73 | stop | 9 | 20221224 |
| EPI_ISL_19520638 | NSP3 | hCoV-19/Spain/CT-HUB09253/2024 | T | 73 | A | 276 | 20240917 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | T | 73 | insstopNFATSIstopITY | 1 | 20220728 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | T | 73 | N | 6 | 20220124 |
| EPI_ISL_19829183 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136422/2025 | T | 73 | I | 8380 | 20250403 |
| EPI_ISL_9190968 | NSP3 | hCoV-19/Chile/RM-199374/2021 | T | 73 | Q | 4 | 20211228 |
| EPI_ISL_17521499 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2069/2023 | T | 73 | Y | 12 | 20230330 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | P | 74 | V | 2 | 20221224 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | P | 74 | del | 73 | 20240118 |
| EPI_ISL_19628852 | NSP3 | hCoV-19/USA/CA-CDPH-500142020/2024 | P | 74 | A | 51 | 20240821 |
| EPI_ISL_14333795 | NSP3 | hCoV-19/USA/ID-IBL-839632/2022 | P | 74 | H | 12 | 20220725 |
| EPI_ISL_19538511 | NSP3 | hCoV-19/Canada/ON-PHL-202420454/2024 | P | 74 | Q | 168 | 20241102 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | P | 74 | stop | 2 | 20210813 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | P | 74 | M | 8 | 20220916 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | P | 74 | G | 2 | 20240316 |
| EPI_ISL_19794239 | NSP3 | hCoV-19/Singapore/Y25R12MSC63/2025 | P | 74 | T | 279 | 20250313 |
| EPI_ISL_19828648 | NSP3 | hCoV-19/Japan/FR055-0165/2025 | P | 74 | L | 1412 | 20250321 |
| EPI_ISL_11934719 | NSP3 | hCoV-19/England/DHSC-CYD41Z5/2022 | P | 74 | insSFKKGAKLL | 1 | 20220206 |
| EPI_ISL_9191019 | NSP3 | hCoV-19/Chile/RM-199381/2021 | P | 74 | E | 10 | 20211228 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | P | 74 | insGHstopFRstopVE | 1 | 20230401 |
| EPI_ISL_11443101 | NSP3 | hCoV-19/Denmark/DCGC-445984/2022 | P | 74 | R | 9 | 20220320 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | P | 74 | N | 5 | 20220307 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | P | 74 | Y | 3 | 20220124 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 74 | K | 2 | 20210318 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | P | 74 | insstopFRstopVE | 1 | 20210628 |
| EPI_ISL_10944013 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8941/2022 | P | 74 | I | 3 | 20220209 |
| EPI_ISL_9476308 | NSP3 | hCoV-19/Brazil/SP-IB_149951/2022 | P | 74 | C | 17 | 20220120 |
| EPI_ISL_19825125 | NSP3 | hCoV-19/USA/CA-PFZ04937/2025 | P | 74 | S | 8515 | 20250320 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 75 | K | 3 | 20221229 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | L | 75 | insHHWALIstopMS | 2 | 20220124 |
| EPI_ISL_14333795 | NSP3 | hCoV-19/USA/ID-IBL-839632/2022 | L | 75 | W | 14 | 20220725 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | L | 75 | I | 21 | 20240320 |
| EPI_ISL_19686176 | NSP3 | hCoV-19/Ireland/G-GUH-N3356/2024 | L | 75 | M | 3366 | 20241224 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 75 | D | 1 | 20210318 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | L | 75 | F | 1 | 20211015 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | L | 75 | del | 68 | 20240118 |
| EPI_ISL_19826579 | NSP3 | hCoV-19/USA/NY-PRL-250408_81H02/2025 | L | 75 | P | 87 | 20250317 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | L | 75 | Y | 12 | 20230401 |
| EPI_ISL_17949784 | NSP3 | hCoV-19/India/KA-RFNB-20161/2023 | L | 75 | V | 22 | 20230506 |
| EPI_ISL_19694295 | NSP3 | hCoV-19/USA/CO-CDPHE-42822096/2024 | L | 75 | Q | 943 | 20241229 |
| EPI_ISL_3922909 | NSP3 | hCoV-19/USA/ID-IBL-749545/2021 | L | 75 | H | 3 | 20210815 |
| EPI_ISL_9476308 | NSP3 | hCoV-19/Brazil/SP-IB_149951/2022 | L | 75 | C | 18 | 20220120 |
| EPI_ISL_19563340 | NSP3 | hCoV-19/Netherlands/NB-RIVM-143824/2024 | L | 75 | R | 23 | 20241104 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | L | 75 | A | 1 | 20210801 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | L | 75 | S | 7 | 20220128 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | L | 75 | E | 1 | 20240316 |
| EPI_ISL_18867482 | NSP3 | hCoV-19/India/MP-DRDE-1197/2023 | L | 75 | T | 16 | 20231229 |
| EPI_ISL_12955833 | NSP3 | hCoV-19/Russia/LIP-CRIE-7734003619/2022 | G | 76 | T | 3 | 20220228 |
| EPI_ISL_2628165 | NSP3 | hCoV-19/Spain/CT-HUVH-E99932/2021 | G | 76 | insRXXXX | 1 | 20210603 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | G | 76 | P | 1 | 20230415 |
| EPI_ISL_19800146 | NSP3 | hCoV-19/USA/IA-SHL-2601109/2025 | G | 76 | S | 1347 | 20250319 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | G | 76 | E | 1 | 20240316 |
| EPI_ISL_9476287 | NSP3 | hCoV-19/Brazil/SP-IB_149733/2022 | G | 76 | insRCCRV | 1 | 20220114 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | G | 76 | del | 67 | 20240118 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | G | 76 | K | 1 | 20210118 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | G | 76 | Y | 7 | 20220307 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | G | 76 | H | 1 | 20210805 |
| EPI_ISL_19143507 | NSP3 | hCoV-19/Pakistan/GRH42652/2024 | G | 76 | stop | 20 | 20240320 |
| EPI_ISL_19739424 | NSP3 | hCoV-19/USA/NJ-CDC-LC1131705/2025 | G | 76 | C | 1298 | 20250204 |
| EPI_ISL_3922909 | NSP3 | hCoV-19/USA/ID-IBL-749545/2021 | G | 76 | insAL | 1 | 20210815 |
| EPI_ISL_19348678 | NSP3 | hCoV-19/Morocco/4/2020 | G | 76 | N | 1 | 20201206 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | G | 76 | I | 2 | 20211015 |
| EPI_ISL_3922909 | NSP3 | hCoV-19/USA/ID-IBL-749545/2021 | G | 76 | W | 1 | 20210815 |
| EPI_ISL_18882872 | NSP3 | hCoV-19/France/OCC-ChuMtp-99240201517/2024 | G | 76 | V | 92 | 20240120 |
| EPI_ISL_13812251 | NSP3 | hCoV-19/USA/ID-IBL-831278/2022 | G | 76 | insL | 3 | 20220623 |
| EPI_ISL_10944013 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8941/2022 | G | 76 | L | 7 | 20220209 |
| EPI_ISL_14333795 | NSP3 | hCoV-19/USA/ID-IBL-839632/2022 | G | 76 | A | 18 | 20220725 |
| EPI_ISL_9476308 | NSP3 | hCoV-19/Brazil/SP-IB_149951/2022 | G | 76 | insRCCR | 14 | 20220120 |
| EPI_ISL_19821067 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11215/2025 | G | 76 | D | 2218 | 20250318 |
| EPI_ISL_18276593 | NSP3 | hCoV-19/USA/MA-CDC-QDX84735642/2023 | G | 76 | R | 7 | 20230902 |
| EPI_ISL_14866506 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-113569/2022 | I | 77 | J | 3 | 20220828 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | I | 77 | stop | 1 | 20211015 |
| EPI_ISL_18867482 | NSP3 | hCoV-19/India/MP-DRDE-1197/2023 | I | 77 | H | 15 | 20231229 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | I | 77 | del | 68 | 20240118 |
| EPI_ISL_15315601 | NSP3 | hCoV-19/Finland/THL-202218722/2022 | I | 77 | S | 7 | 20220909 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 77 | R | 1 | 20210318 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | I | 77 | E | 3 | 20240316 |
| EPI_ISL_18849722 | NSP3 | hCoV-19/USA/NJ-CDC-LC1089031/2024 | I | 77 | F | 126 | 20240118 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | I | 77 | Y | 10 | 20230401 |
| EPI_ISL_18322336 | NSP3 | hCoV-19/USA/TX-HMH-M-133457/2023 | I | 77 | M | 23 | 20230906 |
| EPI_ISL_18956075 | NSP3 | hCoV-19/Slovenia/IMI-V0-1767/2024 | I | 77 | T | 31 | 20240201 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | I | 77 | N | 11 | 20220210 |
| EPI_ISL_16453788 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-121969/2022 | I | 77 | insIstop | 10 | 20221230 |
| EPI_ISL_19795482 | NSP3 | hCoV-19/Canada/ON-KHS-202500731-v1/2025 | I | 77 | V | 801 | 20250226 |
| EPI_ISL_17789311 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-21E23-MM00022R/2023 | I | 77 | L | 62 | 20230521 |
| EPI_ISL_18421996 | NSP3 | hCoV-19/USA/MD-MDH-8952/2023 | D | 78 | H | 7 | 20230814 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | D | 78 | Q | 1 | 20230415 |
| EPI_ISL_16453788 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-121969/2022 | D | 78 | M | 10 | 20221230 |
| EPI_ISL_18867482 | NSP3 | hCoV-19/India/MP-DRDE-1197/2023 | D | 78 | stop | 19 | 20231229 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | D | 78 | insY | 5 | 20220307 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | D | 78 | S | 3 | 20220703 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | D | 78 | T | 3 | 20210809 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | D | 78 | insKV | 1 | 20221229 |
| EPI_ISL_18501035 | NSP3 | hCoV-19/Sweden/H-23-083255/2023 | D | 78 | A | 24 | 20231105 |
| EPI_ISL_19348699 | NSP3 | hCoV-19/Morocco/25/2020 | D | 78 | K | 2 | 20200923 |
| EPI_ISL_14333795 | NSP3 | hCoV-19/USA/ID-IBL-839632/2022 | D | 78 | insstopM | 8 | 20220725 |
| EPI_ISL_12836616 | NSP3 | hCoV-19/env/USA/CA-SEARCH-87272/2022 | D | 78 | V | 12 | 20220412 |
| EPI_ISL_8806967 | NSP3 | hCoV-19/India/GA-NCCS-212690329/2021 | D | 78 | insstop | 1 | 20210926 |
| EPI_ISL_10858387 | NSP3 | hCoV-19/Turkey/HSGM-G2123/2022 | D | 78 | R | 2 | 20220217 |
| EPI_ISL_18936163 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00114/2023 | D | 78 | del | 88 | 20230417 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | D | 78 | I | 17 | 20230401 |
| EPI_ISL_19823779 | NSP3 | hCoV-19/Brazil/TO-FIOCRUZ-542/2025 | D | 78 | N | 45 | 20250205 |
| EPI_ISL_18967598 | NSP3 | hCoV-19/USA/NY-URMC-O1S1L596-1/2024 | D | 78 | E | 124 | 20240122 |
| EPI_ISL_17348012 | NSP3 | hCoV-19/Puerto Rico/RCMI-1172242/2023 | D | 78 | Y | 16 | 20230117 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | D | 78 | B | 4 | 20230217 |
| EPI_ISL_17668530 | NSP3 | hCoV-19/Greece/NPHO-3593/2023 | D | 78 | G | 70 | 20230227 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | L | 79 | E | 1 | 20240316 |
| EPI_ISL_3556878 | NSP3 | hCoV-19/USA/ID-IBL-634702/2020 | L | 79 | G | 1 | 20200723 |
| EPI_ISL_19700904 | NSP3 | hCoV-19/Japan/FR302-1759/2024 | L | 79 | I | 19 | 20241216 |
| EPI_ISL_9434792 | NSP3 | hCoV-19/Canada/BC-BCCDC-319903/2022 | L | 79 | J | 3 | 20220102 |
| EPI_ISL_3756838 | NSP3 | hCoV-19/USA/ID-IBL-747076/2021 | L | 79 | W | 1 | 20210806 |
| EPI_ISL_18936163 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00114/2023 | L | 79 | del | 86 | 20230417 |
| EPI_ISL_19144208 | NSP3 | hCoV-19/Ireland/D-SVUH-FAY39985-007/2024 | L | 79 | F | 39 | 20240506 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 79 | D | 1 | 20210318 |
| EPI_ISL_16969083 | NSP3 | hCoV-19/England/BRBR-326CB239/2023 | L | 79 | insMS | 1 | 20230210 |
| EPI_ISL_19348699 | NSP3 | hCoV-19/Morocco/25/2020 | L | 79 | R | 1 | 20200923 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 79 | K | 1 | 20220210 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | L | 79 | Y | 4 | 20210809 |
| EPI_ISL_18874346 | NSP3 | hCoV-19/USA/TX-HMH-M-138326/2024 | L | 79 | S | 39 | 20240123 |
| EPI_ISL_12582770 | NSP3 | hCoV-19/Turkey/HSGM-GS2003/2022 | L | 79 | stop | 6 | 20220410 |
| EPI_ISL_19535461 | NSP3 | hCoV-19/Hungary/101864-UPL24-004455/2024 | L | 79 | V | 64 | 20240923 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 79 | T | 2 | 20220210 |
| EPI_ISL_13812251 | NSP3 | hCoV-19/USA/ID-IBL-831278/2022 | L | 79 | M | 8 | 20220623 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | L | 79 | insLIstop | 4 | 20220209 |
| EPI_ISL_8718066 | NSP3 | hCoV-19/USA/ID-IBL-781480/2021 | L | 79 | C | 1 | 20211216 |
| EPI_ISL_19767666 | NSP3 | hCoV-19/South Korea/KDCA297036/2025 | D | 80 | A | 59 | 20250207 |
| EPI_ISL_3242922 | NSP3 | hCoV-19/USA/ID-IBL-640883/2020 | D | 80 | K | 1 | 20200809 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | D | 80 | C | 1 | 20221224 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | D | 80 | F | 1 | 20220110 |
| EPI_ISL_7493998 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081421-992/2021 | D | 80 | insG | 4 | 20210814 |
| EPI_ISL_19538085 | NSP3 | hCoV-19/Canada/ON-PHL-202420006/2024 | D | 80 | N | 386 | 20241029 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | D | 80 | insTRHstopFRstopA | 1 | 20210809 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | D | 80 | insIstopstop | 2 | 20230401 |
| EPI_ISL_16867071 | NSP3 | hCoV-19/England/BRBR-326B82D5/2023 | D | 80 | H | 14 | 20230131 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | D | 80 | R | 10 | 20220728 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | D | 80 | P | 1 | 20220210 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | D | 80 | L | 3 | 20230401 |
| EPI_ISL_3922775 | NSP3 | hCoV-19/USA/ID-IBL-632750/2020 | D | 80 | insMSG | 1 | 20200720 |
| EPI_ISL_18936163 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00114/2023 | D | 80 | del | 80 | 20230417 |
| EPI_ISL_1023841 | NSP3 | hCoV-19/Brazil/RJ-NIL1PL04/2020 | D | 80 | I | 2 | 20200810 |
| EPI_ISL_3922775 | NSP3 | hCoV-19/USA/ID-IBL-632750/2020 | D | 80 | Q | 1 | 20200720 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | D | 80 | stop | 5 | 20220209 |
| EPI_ISL_18226344 | NSP3 | hCoV-19/env/India/MH-FMR_K4-51a/2023 | D | 80 | insGSG | 1 | 20230227 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | D | 80 | V | 7 | 20231121 |
| EPI_ISL_15123472 | NSP3 | hCoV-19/USA/CA-CDPH-500069854/2022 | D | 80 | B | 6 | 20220714 |
| EPI_ISL_19464607 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55214/2024 | D | 80 | G | 161 | 20240922 |
| EPI_ISL_19304000 | NSP3 | hCoV-19/Thailand/NIC_BKK_P2712/2024 | D | 80 | E | 251 | 20240626 |
| EPI_ISL_3923091 | NSP3 | hCoV-19/USA/ID-IBL-749073/2021 | D | 80 | M | 2 | 20210813 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | D | 80 | insGG | 2 | 20230401 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | D | 80 | T | 2 | 20210809 |
| EPI_ISL_19688845 | NSP3 | hCoV-19/USA/NY-URMC-P0S1T473-1/2024 | D | 80 | Y | 81 | 20241006 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | D | 80 | S | 8 | 20230408 |
| EPI_ISL_8724991 | NSP3 | hCoV-19/Colombia/VAC-UV-20030255/2022 | D | 80 | insstopVE | 1 | 20220103 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | E | 81 | insSGV | 1 | 20220103 |
| EPI_ISL_19756548 | NSP3 | hCoV-19/Russia/SPE-RII-MH223238S/2024 | E | 81 | D | 708 | 20241220 |
| EPI_ISL_17781415 | NSP3 | hCoV-19/Czech Republic/NRL_s2003/2023 | E | 81 | K | 33 | 20230323 |
| EPI_ISL_8724991 | NSP3 | hCoV-19/Colombia/VAC-UV-20030255/2022 | E | 81 | stop | 10 | 20220103 |
| EPI_ISL_16633556 | NSP3 | hCoV-19/England/BRBR-326A2FF5/2023 | E | 81 | Z | 6 | 20230116 |
| EPI_ISL_19612003 | NSP3 | hCoV-19/USA/CA-CDPH-500140551/2024 | E | 81 | A | 40 | 20240706 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 81 | L | 3 | 20220210 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | E | 81 | H | 13 | 20220307 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | E | 81 | insGV | 3 | 20240327 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | E | 81 | W | 5 | 20220728 |
| EPI_ISL_3922909 | NSP3 | hCoV-19/USA/ID-IBL-749545/2021 | E | 81 | insV | 1 | 20210815 |
| EPI_ISL_3922796 | NSP3 | hCoV-19/USA/ID-IBL-635961/2020 | E | 81 | insGHstopFRstopGGV | 1 | 20200727 |
| EPI_ISL_3922796 | NSP3 | hCoV-19/USA/ID-IBL-635961/2020 | E | 81 | T | 1 | 20200727 |
| EPI_ISL_18936163 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00114/2023 | E | 81 | del | 77 | 20230417 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | E | 81 | Q | 4 | 20221224 |
| EPI_ISL_3299514 | NSP3 | hCoV-19/Sweden/UUH-000199846222N2/2021 | E | 81 | insXXXXXXXXXLIstopstopV | 1 | 20210428 |
| EPI_ISL_19778933 | NSP3 | hCoV-19/South Korea/KDCA297054/2025 | E | 81 | G | 143 | 20250218 |
| EPI_ISL_12999282 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733537475/2022 | E | 81 | Y | 3 | 20220225 |
| EPI_ISL_3543441 | NSP3 | hCoV-19/USA/ID-IBL-637585/2020 | E | 81 | insVGV | 1 | 20200731 |
| EPI_ISL_19539276 | NSP3 | hCoV-19/Canada/NL-NML-745127/2024 | E | 81 | V | 52 | 20241003 |
| EPI_ISL_14313820 | NSP3 | hCoV-19/USA/TX-HMH-M-109926/2022 | E | 81 | insstopV | 7 | 20220731 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | E | 81 | S | 4 | 20230415 |
| EPI_ISL_14846535 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-135/2022 | E | 81 | insLLF | 1 | 20220427 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | E | 81 | P | 2 | 20240316 |
| EPI_ISL_9476332 | NSP3 | hCoV-19/Brazil/SP-IB_149977/2022 | E | 81 | insXXXXXXXXXXX | 1 | 20220111 |
| EPI_ISL_3242922 | NSP3 | hCoV-19/USA/ID-IBL-640883/2020 | E | 81 | I | 1 | 20200809 |
| EPI_ISL_17016679 | NSP3 | hCoV-19/England/BRBR-326D5A16/2023 | E | 81 | insQYGYILLIstopstopV | 1 | 20230216 |
| EPI_ISL_16331135 | NSP3 | hCoV-19/Germany/NW-RKI-I-1073723/2022 | W | 82 | C | 25 | 20221218 |
| EPI_ISL_13514326 | NSP3 | hCoV-19/Australia/SA157908/2022 | W | 82 | S | 11 | 20220314 |
| EPI_ISL_19724615 | NSP3 | hCoV-19/Canada/QC-L00839135001/2025 | W | 82 | L | 507 | 20250127 |
| EPI_ISL_19215103 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20446/2024 | W | 82 | del | 24 | 20240523 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | W | 82 | F | 14 | 20221226 |
| EPI_ISL_12955763 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748456/2022 | W | 82 | stop | 5 | 20220227 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | W | 82 | D | 1 | 20210118 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | W | 82 | insVG | 1 | 20200626 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | W | 82 | Y | 5 | 20211015 |
| EPI_ISL_11884209 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-1955/2021 | W | 82 | G | 5 | 20211231 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | W | 82 | P | 1 | 20240316 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | W | 82 | I | 1 | 20231121 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | W | 82 | M | 2 | 20221224 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | W | 82 | E | 2 | 20230408 |
| EPI_ISL_13339064 | NSP3 | hCoV-19/Switzerland/AG-ETHZ-37397024/2022 | W | 82 | R | 7 | 20220506 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | W | 82 | K | 3 | 20230415 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | W | 82 | V | 5 | 20210719 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | S | 83 | insstop | 1 | 20210805 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | S | 83 | A | 26 | 20221119 |
| EPI_ISL_11394668 | NSP3 | hCoV-19/Brazil/CE-ITV-178833/2021 | S | 83 | H | 1 | 20210316 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | S | 83 | W | 1 | 20220718 |
| EPI_ISL_17591982 | NSP3 | hCoV-19/Nepal/NPHL-S-2435/2023 | S | 83 | insVW | 1 | 20230327 |
| EPI_ISL_19716768 | NSP3 | hCoV-19/USA/NJ-CDC-LC1129995/2025 | S | 83 | N | 403 | 20250122 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | S | 83 | Q | 43 | 20210419 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | S | 83 | F | 1 | 20230408 |
| EPI_ISL_19746943 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015948/2024 | S | 83 | I | 1167 | 20241220 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | S | 83 | insR | 1 | 20210114 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | S | 83 | L | 59 | 20240327 |
| EPI_ISL_17715103 | NSP3 | hCoV-19/India/UP-MRU-ICMR-86/2023 | S | 83 | insW | 1 | 20230425 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | S | 83 | stop | 9 | 20230401 |
| EPI_ISL_19348686 | NSP3 | hCoV-19/Morocco/12/2020 | S | 83 | D | 1 | 20201107 |
| EPI_ISL_19829161 | NSP3 | hCoV-19/USA/PA-CDC-LC1136630/2025 | S | 83 | R | 140 | 20250402 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | S | 83 | K | 3 | 20231121 |
| EPI_ISL_17715103 | NSP3 | hCoV-19/India/UP-MRU-ICMR-86/2023 | S | 83 | V | 4 | 20230425 |
| EPI_ISL_19706144 | NSP3 | hCoV-19/South Korea/KDCA296819/2024 | S | 83 | G | 187 | 20241228 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | S | 83 | Y | 4 | 20240316 |
| EPI_ISL_19405161 | NSP3 | hCoV-19/USA/HI-H2330651/2024 | S | 83 | C | 42 | 20240716 |
| EPI_ISL_19215103 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20446/2024 | S | 83 | del | 18 | 20240523 |
| EPI_ISL_15982999 | NSP3 | hCoV-19/Brazil/CE-FIOCRUZ-132142CE/2022 | S | 83 | T | 14 | 20220718 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 83 | E | 5 | 20221226 |
| EPI_ISL_19796742 | NSP3 | hCoV-19/England/CLIMB-CM7YGIE7/2025 | M | 84 | I | 602 | 20250210 |
| EPI_ISL_16666996 | NSP3 | hCoV-19/USA/LA-CDC-QDX45278140/2023 | M | 84 | R | 13 | 20230103 |
| EPI_ISL_12955774 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733747717/2022 | M | 84 | W | 2 | 20220227 |
| EPI_ISL_5369001 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-59947/2021 | M | 84 | insIstopMSGV | 1 | 20210830 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | M | 84 | F | 1 | 20240316 |
| EPI_ISL_19773145 | NSP3 | hCoV-19/USA/MD-CDC-LC1134414/2025 | M | 84 | V | 5754 | 20250225 |
| EPI_ISL_15162783 | NSP3 | hCoV-19/India/MH-NCCS-588275764/2021 | M | 84 | insIstopstopVEY | 1 | 20211130 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | M | 84 | H | 59 | 20240327 |
| EPI_ISL_19394683 | NSP3 | hCoV-19/USA/PA-CDC-LC1117680/2024 | M | 84 | L | 64 | 20240825 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | M | 84 | insstopIG | 9 | 20230401 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | M | 84 | Y | 11 | 20220801 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | M | 84 | del | 22 | 20240710 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | M | 84 | G | 2 | 20221226 |
| EPI_ISL_3543398 | NSP3 | hCoV-19/USA/ID-IBL-632742/2020 | M | 84 | insLH | 1 | 20200721 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | M | 84 | C | 11 | 20221119 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | M | 84 | E | 2 | 20230408 |
| EPI_ISL_19508716 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS100938/2024 | M | 84 | K | 25 | 20241018 |
| EPI_ISL_19613094 | NSP3 | hCoV-19/Netherlands/FR-RIVM-144519/2024 | M | 84 | T | 216 | 20241011 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | M | 84 | S | 2 | 20211006 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | A | 85 | C | 2 | 20230415 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | A | 85 | insstopMVVW | 1 | 20210806 |
| EPI_ISL_11936641 | NSP3 | hCoV-19/England/DHSC-CYDEXNQ/2022 | A | 85 | P | 6 | 20220115 |
| EPI_ISL_17715103 | NSP3 | hCoV-19/India/UP-MRU-ICMR-86/2023 | A | 85 | H | 4 | 20230425 |
| EPI_ISL_3543445 | NSP3 | hCoV-19/USA/ID-IBL-642217/2020 | A | 85 | insstopMAGVWLH | 1 | 20200812 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | A | 85 | insstopMSEKH | 1 | 20210806 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | A | 85 | insLLIstopstopVWstopVstopIGF | 1 | 20210804 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 85 | N | 2 | 20210318 |
| EPI_ISL_19473958 | NSP3 | hCoV-19/Australia/QLD0x014B2B/2024 | A | 85 | S | 205 | 20240921 |
| EPI_ISL_19822802 | NSP3 | hCoV-19/Denmark/DCGC-692071/2025 | A | 85 | V | 19755 | 20250317 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | A | 85 | F | 10 | 20230401 |
| EPI_ISL_3556837 | NSP3 | hCoV-19/USA/ID-IBL-632716/2020 | A | 85 | insYILLIstopstopVWstopVstopIGF | 1 | 20200721 |
| EPI_ISL_14846535 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-135/2022 | A | 85 | L | 48 | 20220427 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | A | 85 | M | 1 | 20220801 |
| EPI_ISL_3756619 | NSP3 | hCoV-19/USA/ID-IBL-744731/2021 | A | 85 | Y | 2 | 20210802 |
| EPI_ISL_16185635 | NSP3 | hCoV-19/France/PDL-HMN-22122020514/2022 | A | 85 | G | 13 | 20221121 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | A | 85 | insH | 2 | 20210917 |
| EPI_ISL_16677266 | NSP3 | hCoV-19/France/NAQ-HCL723000098701/2023 | A | 85 | D | 41 | 20230116 |
| EPI_ISL_19799516 | NSP3 | hCoV-19/USA/TX-HMH-M-147503/2025 | A | 85 | T | 1155 | 20250207 |
| EPI_ISL_19348678 | NSP3 | hCoV-19/Morocco/4/2020 | A | 85 | insP | 1 | 20201206 |
| EPI_ISL_19215103 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20446/2024 | A | 85 | del | 21 | 20240523 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | A | 85 | I | 14 | 20220307 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | A | 85 | E | 2 | 20230408 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | A | 85 | insstopMSGVWLH | 8 | 20220307 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | A | 85 | K | 1 | 20221224 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | A | 85 | W | 2 | 20220718 |
| EPI_ISL_17020441 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4854/2023 | T | 86 | S | 51 | 20230131 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | T | 86 | H | 2 | 20220801 |
| EPI_ISL_16997003 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-44883/2022 | T | 86 | R | 4 | 20221210 |
| EPI_ISL_19762582 | NSP3 | hCoV-19/Japan/FR062-0094/2025 | T | 86 | I | 1455 | 20250220 |
| EPI_ISL_18572269 | NSP3 | hCoV-19/Italy/SIC-AOUME-UOSD-GCL-197504126-2021-2385/2021 | T | 86 | Q | 1 | 20210929 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | T | 86 | N | 1 | 20230415 |
| EPI_ISL_19745184 | NSP3 | hCoV-19/USA/LA-EVTL23437/2025 | T | 86 | K | 89 | 20250201 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | T | 86 | Y | 2 | 20210719 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | T | 86 | L | 5 | 20230217 |
| EPI_ISL_17800929 | NSP3 | hCoV-19/Argentina/INEI124115/2022 | T | 86 | P | 12 | 20221223 |
| EPI_ISL_19537766 | NSP3 | hCoV-19/Canada/ON-PHL-202419367-v2/2024 | T | 86 | A | 346 | 20241025 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | T | 86 | stop | 2 | 20210802 |
| EPI_ISL_9191019 | NSP3 | hCoV-19/Chile/RM-199381/2021 | T | 86 | V | 8 | 20211228 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | T | 86 | D | 1 | 20210118 |
| EPI_ISL_19215103 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20446/2024 | T | 86 | del | 22 | 20240523 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 86 | G | 2 | 20220210 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | T | 86 | C | 1 | 20240316 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | T | 86 | E | 3 | 20230408 |
| EPI_ISL_19226631 | NSP3 | hCoV-19/USA/HI-H2329061/2024 | Y | 87 | C | 258 | 20240529 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | Y | 87 | Q | 1 | 20230415 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | Y | 87 | K | 1 | 20221224 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Y | 87 | D | 3 | 20221226 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | Y | 87 | V | 1 | 20211015 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Y | 87 | A | 2 | 20220210 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | Y | 87 | S | 7 | 20220801 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | Y | 87 | L | 5 | 20230217 |
| EPI_ISL_19532784 | NSP3 | hCoV-19/Canada/AB-ABPHL-126099/2024 | Y | 87 | H | 303 | 20241024 |
| EPI_ISL_19215103 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20446/2024 | Y | 87 | del | 27 | 20240523 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | Y | 87 | E | 2 | 20230408 |
| EPI_ISL_11887839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0814/2022 | Y | 87 | P | 5 | 20220122 |
| EPI_ISL_3543369 | NSP3 | hCoV-19/USA/ID-IBL-630925/2020 | Y | 87 | insT | 1 | 20200714 |
| EPI_ISL_14690435 | NSP3 | hCoV-19/Finland/THL-202217122/2022 | Y | 87 | stop | 45 | 20220805 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 87 | F | 1 | 20211006 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | Y | 87 | G | 4 | 20220124 |
| EPI_ISL_16800091 | NSP3 | hCoV-19/United Arab Emirates/BTC-10809/2022 | Y | 87 | N | 3 | 20220301 |
| EPI_ISL_18423697 | NSP3 | hCoV-19/USA/TX-HMH-134910/2023 | Y | 87 | T | 17 | 20231013 |
| EPI_ISL_14846535 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-135/2022 | Y | 87 | I | 3 | 20220427 |
| EPI_ISL_8035953 | NSP3 | hCoV-19/USA/CA-HLX-ATM-5B96D8KZG/2021 | Y | 88 | W | 1 | 20211202 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | Y | 88 | A | 4 | 20220801 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 88 | E | 1 | 20211006 |
| EPI_ISL_19215103 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20446/2024 | Y | 88 | del | 30 | 20240523 |
| EPI_ISL_18114502 | NSP3 | hCoV-19/USA/OH-ODH-SC3031858/2023 | Y | 88 | F | 4 | 20230718 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | Y | 88 | M | 1 | 20240316 |
| EPI_ISL_15362702 | NSP3 | hCoV-19/Italy/SIC-CQRC-3422060799/2022 | Y | 88 | N | 23 | 20221004 |
| EPI_ISL_19824277 | NSP3 | hCoV-19/South Korea/KDCA297267/2025 | Y | 88 | H | 1101 | 20250318 |
| EPI_ISL_8806967 | NSP3 | hCoV-19/India/GA-NCCS-212690329/2021 | Y | 88 | stop | 1 | 20210926 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | Y | 88 | K | 44 | 20210419 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | Y | 88 | S | 1 | 20211015 |
| EPI_ISL_11887839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0814/2022 | Y | 88 | D | 1 | 20220122 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | Y | 88 | I | 5 | 20211102 |
| EPI_ISL_14421179 | NSP3 | hCoV-19/Germany/SN-RKI-I-944617/2022 | Y | 88 | insY | 1 | 20220505 |
| EPI_ISL_19473822 | NSP3 | hCoV-19/South Korea/KDCA295869/2024 | Y | 88 | C | 62 | 20240906 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | Y | 88 | V | 13 | 20230401 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | Y | 88 | L | 64 | 20240327 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | L | 89 | M | 59 | 20240327 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 89 | Y | 1 | 20210318 |
| EPI_ISL_19563544 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-144028/2024 | L | 89 | I | 13 | 20241031 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | L | 89 | stop | 6 | 20220124 |
| EPI_ISL_10813873 | NSP3 | hCoV-19/Israel/ICH-741122127/2022 | L | 89 | S | 7 | 20220201 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 89 | E | 1 | 20211006 |
| EPI_ISL_7722966 | NSP3 | hCoV-19/England/NEWC-2DE2F13/2021 | L | 89 | J | 1 | 20211209 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | L | 89 | F | 42 | 20220727 |
| EPI_ISL_19215103 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20446/2024 | L | 89 | del | 28 | 20240523 |
| EPI_ISL_18096971 | NSP3 | hCoV-19/Japan/PG-552426/2023 | L | 89 | V | 51 | 20230711 |
| EPI_ISL_8035953 | NSP3 | hCoV-19/USA/CA-HLX-ATM-5B96D8KZG/2021 | L | 89 | A | 1 | 20211202 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 89 | K | 1 | 20220210 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | L | 89 | insstop | 1 | 20220727 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | L | 89 | D | 1 | 20230408 |
| EPI_ISL_4117794 | NSP3 | hCoV-19/Thailand/Yala_SEQ15202/2021 | L | 89 | P | 1 | 20210827 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | L | 89 | H | 1 | 20240316 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | L | 89 | insstopstopVWstopVstopIG | 1 | 20211019 |
| EPI_ISL_19348699 | NSP3 | hCoV-19/Morocco/25/2020 | F | 90 | W | 1 | 20200923 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | F | 90 | K | 2 | 20220801 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | F | 90 | G | 2 | 20230408 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | F | 90 | E | 2 | 20220210 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | F | 90 | S | 57 | 20240327 |
| EPI_ISL_18690334 | NSP3 | hCoV-19/USA/TX-HMH-M-135788/2023 | F | 90 | I | 5 | 20231125 |
| EPI_ISL_19215103 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20446/2024 | F | 90 | del | 33 | 20240523 |
| EPI_ISL_19629221 | NSP3 | hCoV-19/USA/CA-CDPH-500144634/2024 | F | 90 | L | 140 | 20241031 |
| EPI_ISL_18672466 | NSP3 | hCoV-19/Sweden/D-6560811776/2023 | F | 90 | C | 79 | 20231210 |
| EPI_ISL_18914190 | NSP3 | hCoV-19/Canada/ON-PHL-202405304-v2/2024 | F | 90 | V | 98 | 20240210 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | F | 90 | stop | 1 | 20210801 |
| EPI_ISL_19014215 | NSP3 | hCoV-19/Germany/NW-RKI-I-1143089/2024 | F | 90 | Y | 54 | 20240228 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | F | 90 | M | 12 | 20220307 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | D | 91 | insstopV | 5 | 20220124 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | D | 91 | K | 1 | 20221224 |
| EPI_ISL_18362023 | NSP3 | hCoV-19/Singapore/R72MR88/2023 | D | 91 | B | 6 | 20231002 |
| EPI_ISL_19677649 | NSP3 | hCoV-19/Argentina/INEI127091/2024 | D | 91 | G | 257 | 20241009 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | D | 91 | S | 11 | 20220307 |
| EPI_ISL_3543445 | NSP3 | hCoV-19/USA/ID-IBL-642217/2020 | D | 91 | insLV | 1 | 20200812 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | D | 91 | F | 4 | 20220801 |
| EPI_ISL_9476311 | NSP3 | hCoV-19/Brazil/SP-IB_149757/2022 | D | 91 | insXXXXXXXXXXX | 1 | 20220114 |
| EPI_ISL_19215103 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20446/2024 | D | 91 | del | 51 | 20240523 |
| EPI_ISL_5934824 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689492_CAM_IZSM_COLLI_TIGEM/2021 | D | 91 | I | 5 | 20211015 |
| EPI_ISL_19756534 | NSP3 | hCoV-19/Russia/SPE-RII-MH223201S/2024 | D | 91 | N | 267 | 20241217 |
| EPI_ISL_12999275 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748912/2022 | D | 91 | H | 3 | 20220227 |
| EPI_ISL_15162800 | NSP3 | hCoV-19/India/MH-NCCS-589456922/2021 | D | 91 | V | 2 | 20211201 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | D | 91 | T | 3 | 20220210 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | D | 91 | Y | 5 | 20221226 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | D | 91 | stop | 1 | 20210801 |
| EPI_ISL_19430980 | NSP3 | hCoV-19/Greece/PHLnetwork_3838/2024 | D | 91 | A | 107 | 20240710 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | D | 91 | insstopstop | 2 | 20210801 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | D | 91 | R | 5 | 20220124 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | D | 91 | insI | 1 | 20211222 |
| EPI_ISL_19161437 | NSP3 | hCoV-19/South Korea/KDCA293067/2024 | D | 91 | E | 300 | 20240430 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | D | 91 | L | 24 | 20240327 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 91 | Q | 1 | 20210318 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | D | 91 | C | 2 | 20220727 |
| EPI_ISL_19348678 | NSP3 | hCoV-19/Morocco/4/2020 | D | 91 | insL | 1 | 20201206 |
| EPI_ISL_18076969 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA8044-P0/2023 | E | 92 | Q | 49 | 20230714 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 92 | C | 1 | 20211006 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | E | 92 | T | 3 | 20221226 |
| EPI_ISL_19215103 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20446/2024 | E | 92 | del | 49 | 20240523 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | E | 92 | S | 6 | 20220718 |
| EPI_ISL_19774639 | NSP3 | hCoV-19/Slovenia/1002781/2024 | E | 92 | V | 70 | 20241226 |
| EPI_ISL_19659029 | NSP3 | hCoV-19/South Korea/KDCA296616/2024 | E | 92 | K | 213 | 20240912 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | E | 92 | Y | 2 | 20211019 |
| EPI_ISL_7852063 | NSP3 | hCoV-19/USA/NY-PRL-2021_1208_00K14/2021 | E | 92 | stop | 5 | 20211206 |
| EPI_ISL_19603137 | NSP3 | hCoV-19/Chile/RM-92027/2024 | E | 92 | G | 443 | 20241118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 92 | P | 3 | 20220210 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | E | 92 | L | 6 | 20240316 |
| EPI_ISL_9307604 | NSP3 | hCoV-19/England/BRBR-34216BF/2022 | E | 92 | Z | 5 | 20220125 |
| EPI_ISL_19464425 | NSP3 | hCoV-19/Australia/SA1955983/2024 | E | 92 | A | 70 | 20240918 |
| EPI_ISL_780102 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-9959/2020 | E | 92 | R | 1 | 20200706 |
| EPI_ISL_19782781 | NSP3 | hCoV-19/Chile/VS-ISPC-18571/2025 | E | 92 | D | 975 | 20250303 |
| EPI_ISL_19610821 | NSP3 | hCoV-19/South Korea/KDCA296478/2024 | S | 93 | P | 46 | 20241118 |
| EPI_ISL_18640525 | NSP3 | hCoV-19/Netherlands/UT-RIVM-134502/2023 | S | 93 | C | 14 | 20231203 |
| EPI_ISL_18322094 | NSP3 | hCoV-19/USA/TX-HMH-M-134179/2023 | S | 93 | del | 50 | 20230920 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | S | 93 | M | 2 | 20210809 |
| EPI_ISL_15777430 | NSP3 | hCoV-19/Russia/SVE-RII-MH103541S/2022 | S | 93 | T | 9 | 20221006 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | S | 93 | L | 7 | 20220118 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | S | 93 | D | 1 | 20211006 |
| EPI_ISL_11173081 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95732/2022 | S | 93 | V | 3 | 20220307 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | S | 93 | G | 2 | 20220801 |
| EPI_ISL_19833002 | NSP3 | hCoV-19/Japan/FR022-0029/2025 | S | 93 | Y | 392 | 20250203 |
| EPI_ISL_19831927 | NSP3 | hCoV-19/England/CLIMB-CM7YKHEO/2025 | S | 93 | F | 2855 | 20250401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 93 | I | 2 | 20220210 |
| EPI_ISL_3556837 | NSP3 | hCoV-19/USA/ID-IBL-632716/2020 | S | 93 | N | 1 | 20200721 |
| EPI_ISL_19568044 | NSP3 | hCoV-19/Japan/FR065-0032/2024 | S | 93 | A | 383 | 20240914 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | S | 93 | E | 2 | 20230408 |
| EPI_ISL_11887823 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0797/2022 | S | 93 | stop | 2 | 20220117 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | S | 93 | K | 2 | 20240316 |
| EPI_ISL_3543445 | NSP3 | hCoV-19/USA/ID-IBL-642217/2020 | G | 94 | N | 1 | 20200812 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | G | 94 | W | 3 | 20220916 |
| EPI_ISL_5343849 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-48737/2020 | G | 94 | R | 1 | 20200715 |
| EPI_ISL_18322094 | NSP3 | hCoV-19/USA/TX-HMH-M-134179/2023 | G | 94 | del | 56 | 20230920 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 94 | I | 1 | 20210318 |
| EPI_ISL_18525842 | NSP3 | hCoV-19/Germany/BY-MVP-000022252/2023 | G | 94 | D | 124 | 20231101 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | G | 94 | F | 2 | 20240316 |
| EPI_ISL_19348686 | NSP3 | hCoV-19/Morocco/12/2020 | G | 94 | H | 1 | 20201107 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | G | 94 | K | 1 | 20221226 |
| EPI_ISL_19793505 | NSP3 | hCoV-19/Japan/FPIPH-FR007-0007/2025 | G | 94 | S | 389 | 20250120 |
| EPI_ISL_8021203 | NSP3 | hCoV-19/Netherlands/NB-RIVM-76321/2021 | G | 94 | A | 2 | 20211208 |
| EPI_ISL_17372582 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2611/2022 | G | 94 | V | 29 | 20221228 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | G | 94 | L | 65 | 20240327 |
| EPI_ISL_19802723 | NSP3 | hCoV-19/South Korea/KDCA297167/2025 | G | 94 | C | 102 | 20250227 |
| EPI_ISL_5511691 | NSP3 | hCoV-19/USA/ID-IBL-758629/2021 | G | 94 | insYILLIstopstopVWstop | 1 | 20210916 |
| EPI_ISL_5934824 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689492_CAM_IZSM_COLLI_TIGEM/2021 | E | 95 | W | 2 | 20211015 |
| EPI_ISL_10944012 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8849/2022 | E | 95 | insstopGstopRRRstopLstopRRRVstopAINSIstopVWYstopRstopLPRstopT | 2 | 20220208 |
| EPI_ISL_12999282 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733537475/2022 | E | 95 | Q | 9 | 20220225 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | E | 95 | insL | 1 | 20200729 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | E | 95 | N | 64 | 20240327 |
| EPI_ISL_19749623 | NSP3 | hCoV-19/USA/DE-DHSS-1174/2025 | E | 95 | G | 1219 | 20250209 |
| EPI_ISL_18546600 | NSP3 | hCoV-19/USA/TX-HMH-M-135183/2023 | E | 95 | stop | 12 | 20231024 |
| EPI_ISL_19817213 | NSP3 | hCoV-19/England/CLIMB-CM7YKKPI/2025 | E | 95 | D | 13083 | 20250319 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | E | 95 | Y | 6 | 20220124 |
| EPI_ISL_19778933 | NSP3 | hCoV-19/South Korea/KDCA297054/2025 | E | 95 | K | 157 | 20250218 |
| EPI_ISL_17084471 | NSP3 | hCoV-19/Chile/LI-13711/2023 | E | 95 | V | 76 | 20230220 |
| EPI_ISL_19503746 | NSP3 | hCoV-19/Russia/TAM-RII-MH202067S/2024 | E | 95 | A | 227 | 20240912 |
| EPI_ISL_17372582 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2611/2022 | E | 95 | S | 8 | 20221228 |
| EPI_ISL_1909249 | NSP3 | hCoV-19/Morocco/FMP-284/2021 | E | 95 | I | 1 | 20210416 |
| EPI_ISL_10944012 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8849/2022 | E | 95 | R | 2 | 20220208 |
| EPI_ISL_17201059 | NSP3 | hCoV-19/England/BRBR-326FAAFD/2023 | E | 95 | Z | 13 | 20230307 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | E | 95 | L | 3 | 20221226 |
| EPI_ISL_18322094 | NSP3 | hCoV-19/USA/TX-HMH-M-134179/2023 | E | 95 | del | 56 | 20230920 |
| EPI_ISL_16414544 | NSP3 | hCoV-19/Turkey/KSS-BDSKEAH4930370886/2022 | F | 96 | Y | 69 | 20221219 |
| EPI_ISL_18971872 | NSP3 | hCoV-19/USA/CO-CDPHE-41731138/2024 | F | 96 | N | 2 | 20240126 |
| EPI_ISL_18706317 | NSP3 | hCoV-19/France/COR-RELAB-HCL723001817001/2023 | F | 96 | C | 15 | 20231206 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | F | 96 | D | 2 | 20230408 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | F | 96 | K | 2 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 96 | T | 1 | 20210318 |
| EPI_ISL_19793971 | NSP3 | hCoV-19/Australia/QLD0x0153AB/2025 | F | 96 | L | 149 | 20250309 |
| EPI_ISL_9152938 | NSP3 | hCoV-19/USA/ID-IBL-784497/2022 | F | 96 | insD | 1 | 20220112 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | F | 96 | W | 23 | 20240327 |
| EPI_ISL_18322094 | NSP3 | hCoV-19/USA/TX-HMH-M-134179/2023 | F | 96 | M | 5 | 20230920 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | F | 96 | G | 1 | 20240316 |
| EPI_ISL_3556871 | NSP3 | hCoV-19/USA/ID-IBL-634211/2020 | F | 96 | stop | 1 | 20200723 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 96 | A | 2 | 20220210 |
| EPI_ISL_17372582 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2611/2022 | F | 96 | H | 1 | 20221228 |
| EPI_ISL_3543368 | NSP3 | hCoV-19/USA/ID-IBL-630916/2020 | F | 96 | insstop | 1 | 20200714 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | F | 96 | E | 1 | 20211006 |
| EPI_ISL_12517895 | NSP3 | hCoV-19/Germany/BY-RKI-I-763165/2022 | F | 96 | I | 17 | 20220423 |
| EPI_ISL_19478412 | NSP3 | hCoV-19/England/CLIMB-CM7Y8EQH/2024 | F | 96 | S | 336 | 20241003 |
| EPI_ISL_17551654 | NSP3 | hCoV-19/USA/AZ-ASPHL-1130/2023 | F | 96 | V | 12 | 20230417 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | F | 96 | del | 44 | 20230415 |
| EPI_ISL_10944012 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8849/2022 | K | 97 | G | 2 | 20220208 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | K | 97 | F | 1 | 20220801 |
| EPI_ISL_19824841 | NSP3 | hCoV-19/Spain/MD-H12O_015/2025 | K | 97 | E | 160 | 20250206 |
| EPI_ISL_19162038 | NSP3 | hCoV-19/Japan/FR043-0005/2024 | K | 97 | T | 10 | 20240303 |
| EPI_ISL_17164322 | NSP3 | hCoV-19/South Korea/KDCA217138/2023 | K | 97 | I | 12 | 20230221 |
| EPI_ISL_2445020 | NSP3 | hCoV-19/USA/AZ-ASPHL-2278/2020 | K | 97 | W | 1 | 20200718 |
| EPI_ISL_3543445 | NSP3 | hCoV-19/USA/ID-IBL-642217/2020 | K | 97 | H | 1 | 20200812 |
| EPI_ISL_1909249 | NSP3 | hCoV-19/Morocco/FMP-284/2021 | K | 97 | V | 2 | 20210416 |
| EPI_ISL_14333795 | NSP3 | hCoV-19/USA/ID-IBL-839632/2022 | K | 97 | L | 61 | 20220725 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | K | 97 | Y | 1 | 20230413 |
| EPI_ISL_19317863 | NSP3 | hCoV-19/USA/TX-HMH-M-142694/2024 | K | 97 | stop | 29 | 20240715 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | K | 97 | del | 50 | 20240327 |
| EPI_ISL_19413746 | NSP3 | hCoV-19/Japan/FR021-0818/2024 | K | 97 | N | 54 | 20240830 |
| EPI_ISL_17372582 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2611/2022 | K | 97 | Q | 7 | 20221228 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | K | 97 | P | 1 | 20230408 |
| EPI_ISL_11531853 | NSP3 | hCoV-19/USA/UT-UPHL-220326976506/2022 | K | 97 | A | 3 | 20220122 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | K | 97 | S | 5 | 20240316 |
| EPI_ISL_19715343 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YFH79/2025 | K | 97 | R | 223 | 20250105 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 97 | D | 1 | 20210318 |
| EPI_ISL_15279960 | NSP3 | hCoV-19/USA/ID-IBL-854745/2022 | L | 98 | I | 31 | 20220916 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | L | 98 | del | 53 | 20240327 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | L | 98 | E | 2 | 20240316 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | L | 98 | P | 1 | 20230408 |
| EPI_ISL_19662574 | NSP3 | hCoV-19/Singapore/R59MQ12/2024 | L | 98 | F | 136 | 20241024 |
| EPI_ISL_8718066 | NSP3 | hCoV-19/USA/ID-IBL-781480/2021 | L | 98 | insstop | 1 | 20211216 |
| EPI_ISL_13075125 | NSP3 | hCoV-19/Israel/ICH-741226959/2022 | L | 98 | insDKTFPPTE | 1 | 20220524 |
| EPI_ISL_12294090 | NSP3 | hCoV-19/Thailand/NIC_BKK_16830/2022 | L | 98 | A | 1 | 20220326 |
| EPI_ISL_18916302 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00020109_01/2023 | L | 98 | W | 45 | 20231205 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | L | 98 | N | 1 | 20211015 |
| EPI_ISL_9262093 | NSP3 | hCoV-19/USA/AZ-TG1187425/2022 | L | 98 | stop | 3 | 20220116 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 98 | T | 1 | 20220210 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | L | 98 | H | 43 | 20210419 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | L | 98 | insIstopstopVWstopVstop | 1 | 20210803 |
| EPI_ISL_18519123 | NSP3 | hCoV-19/USA/NY-NYULH-17114/2023 | L | 98 | M | 14 | 20231107 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 98 | D | 3 | 20211006 |
| EPI_ISL_3922852 | NSP3 | hCoV-19/USA/ID-IBL-639947/2020 | L | 98 | G | 1 | 20200806 |
| EPI_ISL_19071016 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6705/2024 | L | 98 | S | 18 | 20240313 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | L | 98 | K | 2 | 20240628 |
| EPI_ISL_19092821 | NSP3 | hCoV-19/South Korea/KDCA292031/2024 | L | 98 | V | 123 | 20240408 |
| EPI_ISL_17372582 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2611/2022 | A | 99 | N | 2 | 20221228 |
| EPI_ISL_19458728 | NSP3 | hCoV-19/France/BFC-IPP10562/2024 | A | 99 | D | 108 | 20240916 |
| EPI_ISL_19768146 | NSP3 | hCoV-19/USA/TX-USAFSAM-S23386/2024 | A | 99 | S | 225 | 20241210 |
| EPI_ISL_19728204 | NSP3 | hCoV-19/USA/NY-URMC-P3S1T967-1/2025 | A | 99 | V | 766 | 20250120 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | A | 99 | G | 13 | 20230413 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | A | 99 | Q | 1 | 20211019 |
| EPI_ISL_16441620 | NSP3 | hCoV-19/England/BRBR-326652C8/2022 | A | 99 | P | 10 | 20221228 |
| EPI_ISL_19348686 | NSP3 | hCoV-19/Morocco/12/2020 | A | 99 | F | 1 | 20201107 |
| EPI_ISL_10829307 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-86426/2022 | A | 99 | I | 10 | 20220126 |
| EPI_ISL_2445020 | NSP3 | hCoV-19/USA/AZ-ASPHL-2278/2020 | A | 99 | H | 1 | 20200718 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | A | 99 | del | 72 | 20240327 |
| EPI_ISL_10944012 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8849/2022 | A | 99 | W | 2 | 20220208 |
| EPI_ISL_3543445 | NSP3 | hCoV-19/USA/ID-IBL-642217/2020 | A | 99 | C | 1 | 20200812 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | A | 99 | insstopstopVWstopVstopI | 5 | 20220124 |
| EPI_ISL_3756838 | NSP3 | hCoV-19/USA/ID-IBL-747076/2021 | A | 99 | insF | 1 | 20210806 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | A | 99 | L | 5 | 20221224 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | A | 99 | Y | 2 | 20230408 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | A | 99 | K | 1 | 20240628 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | A | 99 | stop | 1 | 20220718 |
| EPI_ISL_19697019 | NSP3 | hCoV-19/USA/IL-RIPHL_15185_G/2025 | A | 99 | T | 966 | 20250108 |
| EPI_ISL_12610869 | NSP3 | hCoV-19/Turkey/HSGM-GS2683/2022 | A | 99 | E | 2 | 20220407 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | S | 100 | C | 3 | 20220718 |
| EPI_ISL_12582767 | NSP3 | hCoV-19/Turkey/HSGM-GS1924/2022 | S | 100 | stop | 3 | 20220401 |
| EPI_ISL_18973530 | NSP3 | hCoV-19/USA/OH-ODH-SC4030882/2024 | S | 100 | P | 443 | 20240226 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | S | 100 | Y | 1 | 20220801 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | S | 100 | K | 2 | 20240628 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | S | 100 | del | 42 | 20230415 |
| EPI_ISL_19481261 | NSP3 | hCoV-19/Hubei/HCDC-XG7356/2024 | S | 100 | A | 161 | 20240911 |
| EPI_ISL_19348686 | NSP3 | hCoV-19/Morocco/12/2020 | S | 100 | E | 1 | 20201107 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | S | 100 | I | 2 | 20220210 |
| EPI_ISL_17372582 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2611/2022 | S | 100 | M | 2 | 20221228 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | S | 100 | D | 5 | 20221119 |
| EPI_ISL_19586112 | NSP3 | hCoV-19/USA/NY-URMC-P0S1S511-1/2024 | S | 100 | L | 222 | 20241023 |
| EPI_ISL_11077816 | NSP3 | hCoV-19/England/BRBR-39FED84/2022 | S | 100 | G | 75 | 20220310 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | S | 100 | F | 7 | 20240316 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | S | 100 | W | 2 | 20220728 |
| EPI_ISL_17063132 | NSP3 | hCoV-19/Northern Ireland/NIRE-0200d5/2023 | S | 100 | T | 122 | 20230202 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | S | 100 | N | 1 | 20230413 |
| EPI_ISL_3922899 | NSP3 | hCoV-19/USA/ID-IBL-749246/2021 | S | 100 | H | 4 | 20210814 |
| EPI_ISL_18322094 | NSP3 | hCoV-19/USA/TX-HMH-M-134179/2023 | S | 100 | insLNWL | 7 | 20230920 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | H | 101 | K | 2 | 20240628 |
| EPI_ISL_18100471 | NSP3 | hCoV-19/Japan/PG-555396/2023 | H | 101 | N | 87 | 20230720 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | H | 101 | S | 2 | 20230408 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 101 | E | 1 | 20220210 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | H | 101 | A | 4 | 20221119 |
| EPI_ISL_3922899 | NSP3 | hCoV-19/USA/ID-IBL-749246/2021 | H | 101 | I | 3 | 20210814 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | H | 101 | V | 1 | 20220210 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | H | 101 | M | 1 | 20211019 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | H | 101 | del | 32 | 20230415 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | H | 101 | insstopFRstopVEYGYILLIstopstopVWstopVstopIGF | 43 | 20210419 |
| EPI_ISL_19348699 | NSP3 | hCoV-19/Morocco/25/2020 | H | 101 | stop | 1 | 20200923 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | H | 101 | L | 320 | 20240316 |
| EPI_ISL_19807223 | NSP3 | hCoV-19/Canada/ON-KHS-202500780-v1/2025 | H | 101 | Y | 2994 | 20250309 |
| EPI_ISL_2445020 | NSP3 | hCoV-19/USA/AZ-ASPHL-2278/2020 | H | 101 | C | 1 | 20200718 |
| EPI_ISL_18828730 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC45013/2024 | H | 101 | P | 17 | 20240101 |
| EPI_ISL_19348686 | NSP3 | hCoV-19/Morocco/12/2020 | H | 101 | G | 1 | 20201107 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | H | 101 | T | 5 | 20220801 |
| EPI_ISL_11077816 | NSP3 | hCoV-19/England/BRBR-39FED84/2022 | H | 101 | F | 31 | 20220310 |
| EPI_ISL_19755675 | NSP3 | hCoV-19/USA/IL-RIPHL_81584_G/2025 | H | 101 | R | 516 | 20250128 |
| EPI_ISL_7660321 | NSP3 | hCoV-19/Italy/ABR-CAST-N5251/2021 | H | 101 | D | 2 | 20211206 |
| EPI_ISL_19746878 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10418/2025 | H | 101 | Q | 15 | 20250115 |
| EPI_ISL_955138 | NSP3 | hCoV-19/Belgium/UZA-UA-4136/2021 | M | 102 | S | 2 | 20210120 |
| EPI_ISL_18918552 | NSP3 | hCoV-19/Poland/Kce-223/2024 | M | 102 | L | 35 | 20240209 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | M | 102 | A | 1 | 20220801 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | M | 102 | insGFT | 1 | 20240628 |
| EPI_ISL_18539829 | NSP3 | hCoV-19/South Korea/KDCA273274/2023 | M | 102 | T | 86 | 20231030 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 102 | Q | 2 | 20220210 |
| EPI_ISL_3772682 | NSP3 | hCoV-19/South Korea/KDCA9528/2021 | M | 102 | K | 3 | 20210801 |
| EPI_ISL_12955778 | NSP3 | hCoV-19/Russia/PER-CRIE-7733743272/2022 | M | 102 | R | 3 | 20220226 |
| EPI_ISL_19176783 | NSP3 | hCoV-19/England/CLIMB-CM7YJFNH/2024 | M | 102 | V | 73 | 20240519 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | M | 102 | insLF | 1 | 20211222 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | M | 102 | P | 1 | 20211006 |
| EPI_ISL_19548897 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-105809/2024 | M | 102 | I | 1436 | 20241003 |
| EPI_ISL_19310892 | NSP3 | hCoV-19/USA/NY-NPHL-240729_82D11/2024 | M | 102 | del | 33 | 20240723 |
| EPI_ISL_3743150 | NSP3 | hCoV-19/USA/ID-IBL-744772/2021 | M | 102 | insC | 2 | 20210802 |
| EPI_ISL_10944012 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8849/2022 | M | 102 | F | 2 | 20220208 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | M | 102 | C | 4 | 20230408 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | M | 102 | Y | 5 | 20240316 |
| EPI_ISL_11023783 | NSP3 | hCoV-19/Turkey/HSGM-G2550/2022 | M | 102 | N | 1 | 20220217 |
| EPI_ISL_19348686 | NSP3 | hCoV-19/Morocco/12/2020 | Y | 103 | E | 1 | 20201107 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 103 | V | 8 | 20220210 |
| EPI_ISL_17393439 | NSP3 | hCoV-19/USA/CA-CDC-LC1032997/2023 | Y | 103 | S | 9 | 20230321 |
| EPI_ISL_19466660 | NSP3 | hCoV-19/USA/NY-GBW-GKISBBBE21868/2024 | Y | 103 | stop | 4 | 20240929 |
| EPI_ISL_16354122 | NSP3 | hCoV-19/Italy/LOM-ASST-69251961/2022 | Y | 103 | D | 2 | 20221227 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Y | 103 | A | 2 | 20220210 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | Y | 103 | I | 7 | 20221119 |
| EPI_ISL_19310892 | NSP3 | hCoV-19/USA/NY-NPHL-240729_82D11/2024 | Y | 103 | del | 34 | 20240723 |
| EPI_ISL_17194654 | NSP3 | hCoV-19/USA/TX-PHH-23V-060G0421/2023 | Y | 103 | F | 26 | 20230301 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | Y | 103 | W | 2 | 20210805 |
| EPI_ISL_17281398 | NSP3 | hCoV-19/England/BRBR-32709EA3/2023 | Y | 103 | L | 7 | 20230317 |
| EPI_ISL_19564836 | NSP3 | hCoV-19/England/CLIMB-CM7YEYQW/2024 | Y | 103 | C | 800 | 20241102 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | Y | 103 | T | 1 | 20230217 |
| EPI_ISL_12145152 | NSP3 | hCoV-19/Turkey/Omega1546/2022 | Y | 103 | N | 1 | 20220312 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | Y | 103 | K | 3 | 20230413 |
| EPI_ISL_19819936 | NSP3 | hCoV-19/Canada/ON-HRL-20251019494850-v1/2025 | Y | 103 | H | 448 | 20250320 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | Y | 103 | Q | 1 | 20220801 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | C | 104 | del | 33 | 20230415 |
| EPI_ISL_8724991 | NSP3 | hCoV-19/Colombia/VAC-UV-20030255/2022 | C | 104 | L | 9 | 20220103 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | C | 104 | M | 1 | 20230408 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | C | 104 | T | 5 | 20240316 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | C | 104 | K | 4 | 20221119 |
| EPI_ISL_19431732 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341175/2024 | C | 104 | F | 124 | 20240828 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | C | 104 | I | 22 | 20240327 |
| EPI_ISL_19348686 | NSP3 | hCoV-19/Morocco/12/2020 | C | 104 | D | 1 | 20201107 |
| EPI_ISL_1097027 | NSP3 | hCoV-19/Egypt/MASRI-012/2020 | C | 104 | W | 1 | 20200608 |
| EPI_ISL_13868532 | NSP3 | hCoV-19/Israel/SMC-7088579/2022 | C | 104 | S | 7 | 20220706 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | C | 104 | G | 1 | 20230413 |
| EPI_ISL_19001684 | NSP3 | hCoV-19/South Korea/KDCA288238/2024 | C | 104 | Y | 183 | 20240220 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | C | 104 | A | 2 | 20220801 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | C | 104 | V | 90 | 20240628 |
| EPI_ISL_19506239 | NSP3 | hCoV-19/South Korea/KDCA296111/2024 | S | 105 | A | 66 | 20240930 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | S | 105 | K | 1 | 20211019 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 105 | D | 1 | 20220210 |
| EPI_ISL_18081225 | NSP3 | hCoV-19/env/Germany/BY-LGL-5943472/2023 | S | 105 | F | 417 | 20230712 |
| EPI_ISL_16124146 | NSP3 | hCoV-19/USA/PA-DHSS-B1127055/2021 | S | 105 | C | 2 | 20210912 |
| EPI_ISL_18322094 | NSP3 | hCoV-19/USA/TX-HMH-M-134179/2023 | S | 105 | M | 2 | 20230920 |
| EPI_ISL_15156517 | NSP3 | hCoV-19/Australia/ACT8046/2022 | S | 105 | P | 4 | 20220808 |
| EPI_ISL_19431732 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341175/2024 | S | 105 | L | 99 | 20240828 |
| EPI_ISL_12146075 | NSP3 | hCoV-19/Turkey/HSGM-GS1549/2022 | S | 105 | Y | 62 | 20220401 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | S | 105 | del | 38 | 20230415 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | S | 105 | H | 3 | 20230408 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | S | 105 | V | 20 | 20240327 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | S | 105 | Q | 1 | 20230413 |
| EPI_ISL_19646000 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015578/2024 | S | 105 | T | 73 | 20241112 |
| EPI_ISL_13812251 | NSP3 | hCoV-19/USA/ID-IBL-831278/2022 | S | 105 | I | 2 | 20220623 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 106 | G | 2 | 20220210 |
| EPI_ISL_13812251 | NSP3 | hCoV-19/USA/ID-IBL-831278/2022 | F | 106 | V | 4 | 20220623 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | F | 106 | M | 1 | 20240316 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | F | 106 | del | 26 | 20230415 |
| EPI_ISL_19455100 | NSP3 | hCoV-19/USA/TX-DSHS-26655/2024 | F | 106 | L | 193 | 20240829 |
| EPI_ISL_2445020 | NSP3 | hCoV-19/USA/AZ-ASPHL-2278/2020 | F | 106 | T | 1 | 20200718 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | F | 106 | Y | 8 | 20230413 |
| EPI_ISL_19499224 | NSP3 | hCoV-19/USA/TX-HMH-M-146624/2024 | F | 106 | S | 17 | 20240929 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | F | 106 | A | 2 | 20220812 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | F | 106 | I | 1 | 20210805 |
| EPI_ISL_11271700 | NSP3 | hCoV-19/England/LSPA-3AE0856/2022 | F | 106 | C | 16 | 20220315 |
| EPI_ISL_19411415 | NSP3 | hCoV-19/South Korea/KDCA295103/2024 | Y | 107 | S | 7 | 20240808 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | Y | 107 | A | 2 | 20230408 |
| EPI_ISL_19211230 | NSP3 | hCoV-19/USA/TX-KVI400790/2024 | Y | 107 | N | 84 | 20240514 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | Y | 107 | D | 9 | 20230413 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | Y | 107 | insL | 5 | 20220124 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Y | 107 | G | 2 | 20220210 |
| EPI_ISL_19475596 | NSP3 | hCoV-19/Haiti/LNSP-99170078/2024 | Y | 107 | L | 162 | 20240715 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | Y | 107 | del | 39 | 20231117 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 107 | V | 1 | 20220210 |
| EPI_ISL_19422167 | NSP3 | hCoV-19/Spain/MD-HULP-200271593/2024 | Y | 107 | C | 223 | 20240823 |
| EPI_ISL_14681135 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-1402HAV041/2022 | Y | 107 | stop | 3 | 20220203 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | Y | 107 | F | 113 | 20240628 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | Y | 107 | Q | 3 | 20221119 |
| EPI_ISL_18226358 | NSP3 | hCoV-19/env/India/MH-FMR_K4-59b/2023 | Y | 107 | T | 18 | 20230403 |
| EPI_ISL_19831992 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YKKXA/2025 | Y | 107 | H | 900 | 20250330 |
| EPI_ISL_12005434 | NSP3 | hCoV-19/Thailand/NIC_TRG_13944/2022 | Y | 107 | I | 3 | 20220315 |
| EPI_ISL_3556878 | NSP3 | hCoV-19/USA/ID-IBL-634702/2020 | Y | 107 | insT | 1 | 20200723 |
| EPI_ISL_19800825 | NSP3 | hCoV-19/Japan/FR062-0112/2025 | P | 108 | L | 1122 | 20250307 |
| EPI_ISL_18370643 | NSP3 | hCoV-19/Georgia/Tb-s7982/2023 | P | 108 | R | 11 | 20230914 |
| EPI_ISL_10944012 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8849/2022 | P | 108 | stop | 2 | 20220208 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | P | 108 | E | 1 | 20220210 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | P | 108 | W | 1 | 20240316 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | P | 108 | del | 38 | 20231117 |
| EPI_ISL_3588767 | NSP3 | hCoV-19/USA/ID-IBL-746455/2021 | P | 108 | insL | 2 | 20210803 |
| EPI_ISL_19348686 | NSP3 | hCoV-19/Morocco/12/2020 | P | 108 | Y | 1 | 20201107 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | P | 108 | D | 1 | 20230413 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 108 | M | 1 | 20211006 |
| EPI_ISL_18971123 | NSP3 | hCoV-19/USA/RI_SHL2400856/2024 | P | 108 | A | 120 | 20240223 |
| EPI_ISL_19833199 | NSP3 | hCoV-19/Poland/Kce-45/2025 | P | 108 | S | 1720 | 20250411 |
| EPI_ISL_19228795 | NSP3 | hCoV-19/Australia/NSW-ICPMR-54308/2024 | P | 108 | T | 275 | 20240611 |
| EPI_ISL_19771456 | NSP3 | hCoV-19/USA/SC-SCDHEC-0009/2025 | P | 108 | H | 4917 | 20250206 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 108 | I | 1 | 20220210 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | P | 108 | V | 1 | 20211019 |
| EPI_ISL_2445020 | NSP3 | hCoV-19/USA/AZ-ASPHL-2278/2020 | P | 108 | Q | 1 | 20200718 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 108 | G | 1 | 20210318 |
| EPI_ISL_19693419 | NSP3 | hCoV-19/USA/MA-UM-G25X85P8/2024 | P | 109 | Q | 100 | 20241202 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | P | 109 | K | 3 | 20230408 |
| EPI_ISL_2445020 | NSP3 | hCoV-19/USA/AZ-ASPHL-2278/2020 | P | 109 | M | 1 | 20200718 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | P | 109 | E | 3 | 20240316 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 109 | H | 1 | 20211006 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | P | 109 | S | 858 | 20240801 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 109 | Y | 1 | 20220210 |
| EPI_ISL_7462775 | NSP3 | hCoV-19/England/NORW-30F84D1/2021 | P | 109 | insXXXXXX | 1 | 20211124 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | P | 109 | R | 22 | 20230401 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | P | 109 | V | 3 | 20221119 |
| EPI_ISL_13811829 | NSP3 | hCoV-19/USA/ID-IBL-690598/2020 | P | 109 | W | 1 | 20201211 |
| EPI_ISL_19473448 | NSP3 | hCoV-19/France/GES-IPP10787/2024 | P | 109 | T | 90 | 20240916 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | P | 109 | A | 122 | 20230217 |
| EPI_ISL_19823362 | NSP3 | hCoV-19/USA/NY-SUNYQB-X1147385/2025 | P | 109 | L | 10124 | 20250329 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | P | 109 | del | 39 | 20231117 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | D | 110 | stop | 2 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 110 | P | 2 | 20220210 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | D | 110 | insM | 7 | 20220128 |
| EPI_ISL_19796742 | NSP3 | hCoV-19/England/CLIMB-CM7YGIE7/2025 | D | 110 | E | 1276 | 20250210 |
| EPI_ISL_17188920 | NSP3 | hCoV-19/USA/WI-MCRI-900197/2023 | D | 110 | H | 29 | 20230115 |
| EPI_ISL_17974711 | NSP3 | hCoV-19/France/ARA-HCL723000862001/2023 | D | 110 | K | 11 | 20230619 |
| EPI_ISL_17500720 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13778/2023 | D | 110 | Q | 17 | 20230321 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | D | 110 | F | 1 | 20230408 |
| EPI_ISL_18322094 | NSP3 | hCoV-19/USA/TX-HMH-M-134179/2023 | D | 110 | S | 55 | 20230920 |
| EPI_ISL_18226358 | NSP3 | hCoV-19/env/India/MH-FMR_K4-59b/2023 | D | 110 | M | 21 | 20230403 |
| EPI_ISL_10525665 | NSP3 | hCoV-19/USA/MN-CDC-IBX569356065210/2022 | D | 110 | insDDEEED | 1 | 20220216 |
| EPI_ISL_17016679 | NSP3 | hCoV-19/England/BRBR-326D5A16/2023 | D | 110 | R | 12 | 20230216 |
| EPI_ISL_19795163 | NSP3 | hCoV-19/USA/NY-CDC-LC1135177/2025 | D | 110 | A | 313 | 20250306 |
| EPI_ISL_19803575 | NSP3 | hCoV-19/USA/WI-WSLH-2500778/2025 | D | 110 | Y | 5457 | 20250209 |
| EPI_ISL_16376718 | NSP3 | hCoV-19/Hong Kong/VZ22360487/2022 | D | 110 | B | 16 | 20221210 |
| EPI_ISL_19183671 | NSP3 | hCoV-19/USA/OH-ODH-SC4031962/2024 | D | 110 | V | 43 | 20240514 |
| EPI_ISL_15942276 | NSP3 | hCoV-19/USA/MI-MDHHS-SC43031/2022 | D | 110 | insAMTHPY | 1 | 20221111 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | D | 110 | L | 2 | 20230217 |
| EPI_ISL_19778735 | NSP3 | hCoV-19/Japan/FR010-0007/2025 | D | 110 | N | 551 | 20250225 |
| EPI_ISL_18916237 | NSP3 | hCoV-19/Denmark/DCGC-670752/2024 | D | 110 | del | 47 | 20240129 |
| EPI_ISL_19588860 | NSP3 | hCoV-19/Canary Islands/CN-HUC-924295915/2024 | D | 110 | G | 900 | 20241021 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | D | 110 | T | 2 | 20230413 |
| EPI_ISL_17292259 | NSP3 | hCoV-19/England/BRBR-3270AD96/2023 | E | 111 | insW | 1 | 20230317 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | E | 111 | N | 1 | 20220812 |
| EPI_ISL_11355262 | NSP3 | hCoV-19/France/GES-ChNa-210064702401/2021 | E | 111 | insstop | 45 | 20210810 |
| EPI_ISL_19802134 | NSP3 | hCoV-19/USA/CA-PFZ04773/2025 | E | 111 | V | 124 | 20250303 |
| EPI_ISL_3556854 | NSP3 | hCoV-19/USA/ID-IBL-633404/2020 | E | 111 | S | 2 | 20200721 |
| EPI_ISL_19716756 | NSP3 | hCoV-19/USA/NJ-CDC-LC1129893/2025 | E | 111 | G | 776 | 20250122 |
| EPI_ISL_17016679 | NSP3 | hCoV-19/England/BRBR-326D5A16/2023 | E | 111 | stop | 16 | 20230216 |
| EPI_ISL_18780051 | NSP3 | hCoV-19/USA/CT-CDC-QDX90761571/2023 | E | 111 | Q | 12 | 20231229 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | E | 111 | del | 46 | 20240315 |
| EPI_ISL_18322094 | NSP3 | hCoV-19/USA/TX-HMH-M-134179/2023 | E | 111 | R | 78 | 20230920 |
| EPI_ISL_3246408 | NSP3 | hCoV-19/Malaysia/2613/2021 | E | 111 | Y | 1 | 20210411 |
| EPI_ISL_19760532 | NSP3 | hCoV-19/Canada/AB-ABPHL-131216/2025 | E | 111 | D | 2133 | 20250212 |
| EPI_ISL_19760156 | NSP3 | hCoV-19/USA/NJ-CDC-LC1132968/2025 | E | 111 | K | 276 | 20250210 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | E | 111 | M | 8 | 20220703 |
| EPI_ISL_11957711 | NSP3 | hCoV-19/England/PHEC-YYD6SBE/2022 | E | 111 | Z | 4 | 20220321 |
| EPI_ISL_19645253 | NSP3 | hCoV-19/Bulgaria/24BG_NC_024362_Run51/2024 | E | 111 | A | 165 | 20240830 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | E | 111 | L | 3 | 20240316 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | D | 112 | P | 1 | 20230217 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | D | 112 | del | 67 | 20240315 |
| EPI_ISL_19783484 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGSF1/2025 | D | 112 | G | 740 | 20250302 |
| EPI_ISL_18555132 | NSP3 | hCoV-19/USA/UT-UPHL-1124669216/2023 | D | 112 | H | 6 | 20231109 |
| EPI_ISL_17031741 | NSP3 | hCoV-19/Hebei/ZJK-65/2023 | D | 112 | V | 7 | 20230125 |
| EPI_ISL_15793258 | NSP3 | hCoV-19/USA/TX-PHH-CS-01927/2022 | D | 112 | insXXXXXX | 1 | 20221009 |
| EPI_ISL_17021243 | NSP3 | hCoV-19/Chile/TA-199237/2021 | D | 112 | Q | 2 | 20211227 |
| EPI_ISL_10951115 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9327/2022 | D | 112 | I | 3 | 20220210 |
| EPI_ISL_18226358 | NSP3 | hCoV-19/env/India/MH-FMR_K4-59b/2023 | D | 112 | M | 27 | 20230403 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | D | 112 | insK | 1 | 20200626 |
| EPI_ISL_3242922 | NSP3 | hCoV-19/USA/ID-IBL-640883/2020 | D | 112 | insGstop | 2 | 20200809 |
| EPI_ISL_19828583 | NSP3 | hCoV-19/Sweden/25-DE-4412/2025 | D | 112 | A | 191 | 20250301 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | D | 112 | S | 1 | 20211019 |
| EPI_ISL_19813547 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-50545/2024 | D | 112 | K | 5 | 20241231 |
| EPI_ISL_18322094 | NSP3 | hCoV-19/USA/TX-HMH-M-134179/2023 | D | 112 | stop | 7 | 20230920 |
| EPI_ISL_19276337 | NSP3 | hCoV-19/England/CLIMB-CM7YGYC5/2024 | D | 112 | B | 30 | 20240621 |
| EPI_ISL_19587958 | NSP3 | hCoV-19/USA/MD-UW-22091599951/2022 | D | 112 | insDE | 1 | 20220915 |
| EPI_ISL_12955762 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748833/2022 | D | 112 | T | 2 | 20220227 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | D | 112 | L | 4 | 20221119 |
| EPI_ISL_19750142 | NSP3 | hCoV-19/Canada/AB-ABPHL-131174/2025 | D | 112 | Y | 1153 | 20250203 |
| EPI_ISL_15927193 | NSP3 | hCoV-19/Spain/CT-HUVH-EXE60215/2022 | D | 112 | C | 289 | 20221122 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | D | 112 | R | 9 | 20220703 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | D | 112 | insstop | 4 | 20211229 |
| EPI_ISL_19812381 | NSP3 | hCoV-19/Germany/MV-RKI-I-1147943/2025 | D | 112 | N | 1097 | 20250310 |
| EPI_ISL_19801656 | NSP3 | hCoV-19/Brazil/RR-IEC-25-008920/2025 | D | 112 | E | 462 | 20250313 |
| EPI_ISL_12146072 | NSP3 | hCoV-19/Turkey/HSGM-GS1543/2022 | D | 112 | F | 1 | 20220401 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | E | 113 | T | 3 | 20231117 |
| EPI_ISL_18900141 | NSP3 | hCoV-19/South Korea/KDCA284794/2024 | E | 113 | V | 25 | 20240126 |
| EPI_ISL_17016679 | NSP3 | hCoV-19/England/BRBR-326D5A16/2023 | E | 113 | stop | 76 | 20230216 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | E | 113 | S | 2 | 20230408 |
| EPI_ISL_19831539 | NSP3 | hCoV-19/Germany/NI-RKI-I-1148018/2025 | E | 113 | G | 581 | 20250319 |
| EPI_ISL_13576105 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-10672/2022 | E | 113 | I | 1 | 20220609 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | E | 113 | del | 78 | 20240802 |
| EPI_ISL_17350563 | NSP3 | hCoV-19/England/BRBR-3270F098/2023 | E | 113 | Z | 7 | 20230320 |
| EPI_ISL_3556878 | NSP3 | hCoV-19/USA/ID-IBL-634702/2020 | E | 113 | insG | 1 | 20200723 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | E | 113 | L | 3 | 20221119 |
| EPI_ISL_19713404 | NSP3 | hCoV-19/Canada/BC-BCCDC-765573/2025 | E | 113 | A | 152 | 20250121 |
| EPI_ISL_10951115 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9327/2022 | E | 113 | N | 2 | 20220210 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | E | 113 | R | 8 | 20230401 |
| EPI_ISL_19813547 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-50545/2024 | E | 113 | K | 191 | 20241231 |
| EPI_ISL_19831297 | NSP3 | hCoV-19/Australia/WA16914/2025 | E | 113 | D | 297 | 20250327 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | E | 113 | M | 5 | 20220703 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | E | 113 | Q | 4 | 20230419 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | E | 114 | Z | 16 | 20230217 |
| EPI_ISL_10951115 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9327/2022 | E | 114 | S | 2 | 20220210 |
| EPI_ISL_2445020 | NSP3 | hCoV-19/USA/AZ-ASPHL-2278/2020 | E | 114 | insVIV | 1 | 20200718 |
| EPI_ISL_11907644 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-23/2022 | E | 114 | insL | 1 | 20220207 |
| EPI_ISL_17417903 | NSP3 | hCoV-19/USA/IL-SHIELD-3302023024/2023 | E | 114 | stop | 18 | 20230323 |
| EPI_ISL_18615488 | NSP3 | hCoV-19/USA/HI-H2326352/2023 | E | 114 | Q | 81 | 20231118 |
| EPI_ISL_18501477 | NSP3 | hCoV-19/Canada/SK-RRPL-664899/2023 | E | 114 | V | 27 | 20231025 |
| EPI_ISL_19820172 | NSP3 | hCoV-19/USA/NY-PRL-250401_84C12/2025 | E | 114 | K | 450 | 20250325 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | E | 114 | R | 60 | 20230401 |
| EPI_ISL_19803448 | NSP3 | hCoV-19/USA/WI-WSLH-2500949/2025 | E | 114 | G | 158 | 20250302 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | E | 114 | T | 3 | 20221119 |
| EPI_ISL_19687917 | NSP3 | hCoV-19/Slovenia/IMI-V1-987/2025 | E | 114 | D | 291 | 20250120 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | E | 114 | Y | 1 | 20230413 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 114 | F | 1 | 20211006 |
| EPI_ISL_19317473 | NSP3 | hCoV-19/USA/TX-HMH-M-142317/2024 | E | 114 | A | 65 | 20240704 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | E | 114 | del | 78 | 20240802 |
| EPI_ISL_19570023 | NSP3 | hCoV-19/USA/MD-UW-22091469448/2022 | E | 114 | insV | 1 | 20220914 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | E | 114 | L | 2 | 20231117 |
| EPI_ISL_12955763 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748456/2022 | E | 115 | Y | 1 | 20220227 |
| EPI_ISL_19813547 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-50545/2024 | E | 115 | K | 655 | 20241231 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 115 | T | 1 | 20210318 |
| EPI_ISL_11340444 | NSP3 | hCoV-19/England/BRBR-3B0BCD0/2022 | E | 115 | Z | 3 | 20220316 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | E | 115 | del | 107 | 20240802 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | E | 115 | P | 2 | 20221119 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 115 | L | 1 | 20220210 |
| EPI_ISL_19365730 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-144685/2024 | E | 115 | insDEDEEE | 33 | 20240808 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | E | 115 | M | 1 | 20210521 |
| EPI_ISL_19457332 | NSP3 | hCoV-19/Canada/ON-PHL-202414825/2024 | E | 115 | insE | 441 | 20240917 |
| EPI_ISL_19009767 | NSP3 | hCoV-19/Australia/QLD0x014175/2024 | E | 115 | V | 678 | 20240303 |
| EPI_ISL_19829117 | NSP3 | hCoV-19/USA/NY-CDC-LC1136555/2025 | E | 115 | G | 384 | 20250401 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | E | 115 | Q | 11 | 20231117 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | E | 115 | I | 4 | 20220812 |
| EPI_ISL_19807231 | NSP3 | hCoV-19/Canada/ON-KHS-202500794-v1/2025 | E | 115 | D | 366 | 20250312 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | E | 115 | R | 55 | 20230401 |
| EPI_ISL_14588276 | NSP3 | hCoV-19/USA/ID-IBL-844610/2022 | E | 115 | stop | 4 | 20220810 |
| EPI_ISL_19624336 | NSP3 | hCoV-19/Slovenia/IMI-V1-14383/2024 | E | 115 | A | 1312 | 20241212 |
| EPI_ISL_19014042 | NSP3 | hCoV-19/Japan/7517659_S41/2024 | G | 116 | R | 94 | 20240118 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | G | 116 | K | 5 | 20220703 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | G | 116 | Y | 2 | 20220210 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | G | 116 | stop | 3 | 20230401 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | G | 116 | M | 2 | 20231117 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | G | 116 | del | 101 | 20240802 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | G | 116 | T | 2 | 20230413 |
| EPI_ISL_13576105 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-10672/2022 | G | 116 | A | 4 | 20220609 |
| EPI_ISL_9190968 | NSP3 | hCoV-19/Chile/RM-199374/2021 | G | 116 | E | 4 | 20211228 |
| EPI_ISL_19736445 | NSP3 | hCoV-19/France/PAC-RELAB-HCL725000027401/2025 | G | 116 | V | 557 | 20250205 |
| EPI_ISL_19825062 | NSP3 | hCoV-19/USA/CA-PFZ04969/2025 | G | 116 | D | 760 | 20250318 |
| EPI_ISL_10924463 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11731/2022 | G | 116 | N | 1 | 20220227 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | G | 116 | Q | 2 | 20230217 |
| EPI_ISL_19773269 | NSP3 | hCoV-19/USA/NJ-CDC-LC1134260/2025 | G | 116 | C | 2076 | 20250227 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | G | 116 | F | 11 | 20230408 |
| EPI_ISL_17713258 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200466957N2/2022 | G | 116 | insXX | 1 | 20220922 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | G | 116 | I | 2 | 20240307 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | G | 116 | L | 3 | 20221119 |
| EPI_ISL_19804304 | NSP3 | hCoV-19/Ireland/D-SVUH-FBA52164-022/2025 | G | 116 | S | 1761 | 20250324 |
| EPI_ISL_18861797 | NSP3 | hCoV-19/USA/NY-CDC-QDX91770531/2024 | D | 117 | E | 237 | 20240121 |
| EPI_ISL_11906889 | NSP3 | hCoV-19/Pakistan/PACP-PB-PPHRL-21/2022 | D | 117 | F | 1 | 20220206 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | D | 117 | P | 2 | 20220210 |
| EPI_ISL_18226358 | NSP3 | hCoV-19/env/India/MH-FMR_K4-59b/2023 | D | 117 | I | 29 | 20230403 |
| EPI_ISL_19781917 | NSP3 | hCoV-19/USA/NY-Wadsworth-25021484-01/2025 | D | 117 | G | 9694 | 20250304 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | D | 117 | R | 3 | 20231117 |
| EPI_ISL_19554376 | NSP3 | hCoV-19/USA/NM-NMDOH-033294/2024 | D | 117 | Y | 296 | 20240930 |
| EPI_ISL_19432534 | NSP3 | hCoV-19/Canada/ON-PHL-202414546/2024 | D | 117 | B | 19 | 20240916 |
| EPI_ISL_19758879 | NSP3 | hCoV-19/Sweden/D-04_SE100_25CS500094/2025 | D | 117 | A | 252 | 20250128 |
| EPI_ISL_16852163 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_TECRME2U2VRNG2CS/2023 | D | 117 | H | 15 | 20230130 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | D | 117 | L | 2 | 20230408 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 117 | T | 2 | 20220210 |
| EPI_ISL_8146143 | NSP3 | hCoV-19/Sweden/UUH-500000065913SP/2021 | D | 117 | insVI | 1 | 20211209 |
| EPI_ISL_17016679 | NSP3 | hCoV-19/England/BRBR-326D5A16/2023 | D | 117 | stop | 54 | 20230216 |
| EPI_ISL_11385204 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-49/2022 | D | 117 | insL | 1 | 20220225 |
| EPI_ISL_19821919 | NSP3 | hCoV-19/USA/FL-CDC-LC1136376/2025 | D | 117 | N | 705 | 20250327 |
| EPI_ISL_19240845 | NSP3 | hCoV-19/USA/FL-GBW-GKISBBBD08566/2024 | D | 117 | V | 82 | 20240625 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | D | 117 | del | 140 | 20240802 |
| EPI_ISL_2445020 | NSP3 | hCoV-19/USA/AZ-ASPHL-2278/2020 | D | 117 | K | 1 | 20200718 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | D | 117 | S | 6 | 20230422 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | C | 118 | N | 3 | 20230422 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | C | 118 | del | 145 | 20240802 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | C | 118 | A | 3 | 20220210 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | C | 118 | insR | 1 | 20210806 |
| EPI_ISL_12676410 | NSP3 | hCoV-19/Germany/RP-RKI-I-786942/2022 | C | 118 | insG | 2 | 20220430 |
| EPI_ISL_3759988 | NSP3 | hCoV-19/USA/ID-IBL-747478/2021 | C | 118 | insM | 1 | 20210809 |
| EPI_ISL_18501326 | NSP3 | hCoV-19/Germany/BY-LGL-6049137/2023 | C | 118 | F | 60 | 20231023 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | C | 118 | M | 2 | 20231117 |
| EPI_ISL_19513862 | NSP3 | hCoV-19/USA/UT-USAFSAM-S23108/2024 | C | 118 | W | 36 | 20240930 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | C | 118 | E | 1 | 20211006 |
| EPI_ISL_19620723 | NSP3 | hCoV-19/Canada/ON-PHL-202424448/2024 | C | 118 | S | 205 | 20241209 |
| EPI_ISL_19298079 | NSP3 | hCoV-19/USA/FL-CDC-LC1110225/2024 | C | 118 | G | 24 | 20240712 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | C | 118 | P | 1 | 20230413 |
| EPI_ISL_19508347 | NSP3 | hCoV-19/Germany/BY-RKI-I-1145417/2024 | C | 118 | Y | 770 | 20240925 |
| EPI_ISL_8718070 | NSP3 | hCoV-19/USA/ID-IBL-781586/2022 | C | 118 | stop | 4 | 20220104 |
| EPI_ISL_19240845 | NSP3 | hCoV-19/USA/FL-GBW-GKISBBBD08566/2024 | C | 118 | L | 21 | 20240625 |
| EPI_ISL_18226358 | NSP3 | hCoV-19/env/India/MH-FMR_K4-59b/2023 | C | 118 | V | 27 | 20230403 |
| EPI_ISL_19722238 | NSP3 | hCoV-19/Japan/FR082-0012/2025 | C | 118 | R | 225 | 20250131 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | C | 118 | I | 7 | 20221119 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | E | 119 | S | 2 | 20230422 |
| EPI_ISL_9558540 | NSP3 | hCoV-19/England/LSPA-349F18E/2022 | E | 119 | Q | 3 | 20220126 |
| EPI_ISL_14615134 | NSP3 | hCoV-19/USA/MA-NEB-acda-62948/2022 | E | 119 | Z | 2 | 20220707 |
| EPI_ISL_19716685 | NSP3 | hCoV-19/USA/NC-CDC-LC1130449/2025 | E | 119 | G | 641 | 20250121 |
| EPI_ISL_12999282 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733537475/2022 | E | 119 | T | 1 | 20220225 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | E | 119 | del | 124 | 20240802 |
| EPI_ISL_19522451 | NSP3 | hCoV-19/Wales/CLIMB-CM7YM19Q/2024 | E | 119 | A | 219 | 20241018 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | E | 119 | Y | 1 | 20230408 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | E | 119 | stop | 28 | 20230401 |
| EPI_ISL_19733776 | NSP3 | hCoV-19/USA/HI-H2531422/2025 | E | 119 | K | 323 | 20250108 |
| EPI_ISL_9190968 | NSP3 | hCoV-19/Chile/RM-199374/2021 | E | 119 | L | 6 | 20211228 |
| EPI_ISL_19430491 | NSP3 | hCoV-19/Australia/QLD0x014A69/2024 | E | 119 | D | 306 | 20240908 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | E | 119 | I | 4 | 20220804 |
| EPI_ISL_19657205 | NSP3 | hCoV-19/USA/NJ-CDC-LC1127592/2024 | E | 119 | V | 168 | 20241219 |
| EPI_ISL_14588276 | NSP3 | hCoV-19/USA/ID-IBL-844610/2022 | E | 119 | R | 8 | 20220810 |
| EPI_ISL_19634303 | NSP3 | hCoV-19/Malaysia/MKAK_CL_84816/2024 | E | 120 | V | 86 | 20241105 |
| EPI_ISL_19131289 | NSP3 | hCoV-19/env/Ukraine/83691/2023 | E | 120 | Q | 19 | 20231127 |
| EPI_ISL_19823354 | NSP3 | hCoV-19/USA/NY-SUNYQB-X3783731/2025 | E | 120 | G | 723 | 20250320 |
| EPI_ISL_11907648 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-27/2022 | E | 120 | N | 1 | 20220211 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 120 | I | 1 | 20220210 |
| EPI_ISL_17273858 | NSP3 | hCoV-19/England/BRBR-32707D11/2023 | E | 120 | Z | 11 | 20230314 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | E | 120 | del | 105 | 20240802 |
| EPI_ISL_14588276 | NSP3 | hCoV-19/USA/ID-IBL-844610/2022 | E | 120 | insLstop | 1 | 20220810 |
| EPI_ISL_19686747 | NSP3 | hCoV-19/New Zealand/25YA0151/2025 | E | 120 | D | 282 | 20250101 |
| EPI_ISL_19669195 | NSP3 | hCoV-19/Canada/SK-RRPL-758374/2024 | E | 120 | K | 365 | 20241210 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | E | 120 | R | 18 | 20230401 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | E | 120 | T | 1 | 20230408 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | E | 120 | F | 3 | 20230413 |
| EPI_ISL_4530175 | NSP3 | hCoV-19/England/PHEC-3G072G79/2021 | E | 120 | M | 1 | 20210919 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | E | 120 | L | 2 | 20221119 |
| EPI_ISL_19666064 | NSP3 | hCoV-19/USA/NJ-CDC-LC1127828/2025 | E | 120 | A | 283 | 20250101 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | E | 120 | S | 5 | 20230422 |
| EPI_ISL_17247006 | NSP3 | hCoV-19/Slovenia/6833/2023 | E | 120 | stop | 12 | 20230213 |
| EPI_ISL_17051879 | NSP3 | hCoV-19/USA/TX-UTEP-B002527631/2022 | E | 121 | stop | 7 | 20220714 |
| EPI_ISL_19463017 | NSP3 | hCoV-19/Brazil/TO-FIOCRUZ-10644/2024 | E | 121 | V | 74 | 20240816 |
| EPI_ISL_19828723 | NSP3 | hCoV-19/USA/NJ-GBW-GKPLAAAA48385/2025 | E | 121 | D | 423 | 20250407 |
| EPI_ISL_19230351 | NSP3 | hCoV-19/Netherlands/UT-RIVM-138731/2024 | E | 121 | insGDCEEE | 2 | 20240613 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | E | 121 | H | 21 | 20211019 |
| EPI_ISL_19519657 | NSP3 | hCoV-19/USA/IA-SHL-2515131/2024 | E | 121 | G | 585 | 20241022 |
| EPI_ISL_18494485 | NSP3 | hCoV-19/Denmark/DCGC-662514/2023 | E | 121 | Z | 26 | 20231030 |
| EPI_ISL_17514538 | NSP3 | hCoV-19/Sweden/03_SE600_000200495831N2/2022 | E | 121 | insXXX | 1 | 20221124 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | E | 121 | S | 2 | 20230422 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | E | 121 | R | 20 | 20230401 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 121 | L | 2 | 20211006 |
| EPI_ISL_19125512 | NSP3 | hCoV-19/Japan/FR033-0050/2024 | E | 121 | A | 122 | 20240308 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | E | 121 | del | 89 | 20240802 |
| EPI_ISL_16528837 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12944/2022 | E | 121 | Q | 16 | 20221228 |
| EPI_ISL_19806429 | NSP3 | hCoV-19/Canada/ON-HRL-20251019069505-v1/2025 | E | 121 | K | 652 | 20250301 |
| EPI_ISL_3543396 | NSP3 | hCoV-19/USA/ID-IBL-632714/2020 | E | 121 | insG | 1 | 20200721 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | E | 121 | insVstopAI | 1 | 20220117 |
| EPI_ISL_17741741 | NSP3 | hCoV-19/South Korea/KDCA391510/2021 | E | 121 | insSLSH | 3 | 20211113 |
| EPI_ISL_19439438 | NSP3 | hCoV-19/USA/CA-CDPH-500141544/2024 | E | 122 | insE | 696 | 20240805 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | E | 122 | S | 23 | 20230422 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 122 | L | 2 | 20220210 |
| EPI_ISL_3923063 | NSP3 | hCoV-19/USA/ID-IBL-749041/2021 | E | 122 | I | 1 | 20210813 |
| EPI_ISL_19805692 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U758-1/2025 | E | 122 | K | 459 | 20250310 |
| EPI_ISL_19831305 | NSP3 | hCoV-19/Hong Kong/VB25110378/2025 | E | 122 | D | 2446 | 20250331 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | E | 122 | W | 2 | 20230217 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | E | 122 | del | 126 | 20240802 |
| EPI_ISL_19265591 | NSP3 | hCoV-19/Belgium/Sciensano-LS-S5150/2024 | E | 122 | A | 295 | 20240625 |
| EPI_ISL_19541433 | NSP3 | hCoV-19/USA/DE-CDC-LC1125103/2024 | E | 122 | V | 175 | 20241026 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | E | 122 | N | 3 | 20230415 |
| EPI_ISL_19808149 | NSP3 | hCoV-19/Canada/ON-PHL-202504272/2025 | E | 122 | G | 941 | 20250213 |
| EPI_ISL_16985873 | NSP3 | hCoV-19/England/BRBR-326CE2DC/2023 | E | 122 | Z | 20 | 20230211 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | E | 122 | M | 2 | 20230408 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 122 | Y | 1 | 20211006 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | E | 122 | R | 13 | 20230401 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | E | 122 | insD | 1 | 20220105 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | E | 122 | T | 1 | 20210805 |
| EPI_ISL_19167582 | NSP3 | hCoV-19/Hubei/HCDC-XT5292/2024 | E | 122 | Q | 17 | 20240507 |
| EPI_ISL_17016679 | NSP3 | hCoV-19/England/BRBR-326D5A16/2023 | E | 122 | stop | 7 | 20230216 |
| EPI_ISL_9190941 | NSP3 | hCoV-19/Chile/VS-199364/2021 | F | 123 | T | 2 | 20211228 |
| EPI_ISL_19749598 | NSP3 | hCoV-19/USA/DE-DHSS-1149/2025 | F | 123 | L | 2740 | 20250205 |
| EPI_ISL_15527444 | NSP3 | hCoV-19/Chile/LI-120693/2022 | F | 123 | insXXXGAT | 1 | 20221017 |
| EPI_ISL_19705966 | NSP3 | hCoV-19/Germany/BE-RKI-I-1147487/2025 | F | 123 | S | 267 | 20250116 |
| EPI_ISL_19014042 | NSP3 | hCoV-19/Japan/7517659_S41/2024 | F | 123 | E | 2 | 20240118 |
| EPI_ISL_2603416 | NSP3 | hCoV-19/France/ARA-CHUGA-1065843103/2021 | F | 123 | K | 1 | 20210608 |
| EPI_ISL_19645464 | NSP3 | hCoV-19/Japan/FR012-0721/2024 | F | 123 | del | 143 | 20241205 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | F | 123 | W | 2 | 20221119 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | F | 123 | stop | 4 | 20230401 |
| EPI_ISL_18633364 | NSP3 | hCoV-19/Australia/NSW-ICPMR-51818/2023 | F | 123 | Y | 69 | 20231126 |
| EPI_ISL_19411415 | NSP3 | hCoV-19/South Korea/KDCA295103/2024 | F | 123 | C | 153 | 20240808 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | F | 123 | Q | 2 | 20230422 |
| EPI_ISL_3556844 | NSP3 | hCoV-19/USA/ID-IBL-633079/2020 | F | 123 | insGAIQL | 1 | 20200721 |
| EPI_ISL_17429121 | NSP3 | hCoV-19/USA/CA-CDC-QDX48365706/2023 | F | 123 | V | 38 | 20230322 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | F | 123 | I | 9 | 20231117 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | F | 123 | D | 1 | 20210727 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | F | 123 | A | 2 | 20210319 |
| EPI_ISL_14333795 | NSP3 | hCoV-19/USA/ID-IBL-839632/2022 | F | 123 | H | 1 | 20220725 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | E | 124 | insstopGstopRRRstopLstopRRVstop | 1 | 20210805 |
| EPI_ISL_10924623 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11597/2022 | E | 124 | Y | 2 | 20220226 |
| EPI_ISL_19802280 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10950/2025 | E | 124 | K | 317 | 20250307 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | E | 124 | N | 9 | 20221224 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 124 | L | 2 | 20230420 |
| EPI_ISL_18726233 | NSP3 | hCoV-19/Singapore/R1MQ179/2023 | E | 124 | Z | 9 | 20231212 |
| EPI_ISL_17484390 | NSP3 | hCoV-19/Slovakia/23-1593/2023 | E | 124 | Q | 7 | 20230206 |
| EPI_ISL_19363929 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14032/2024 | E | 124 | stop | 21 | 20240324 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | E | 124 | W | 1 | 20230408 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | E | 124 | S | 23 | 20230422 |
| EPI_ISL_3556854 | NSP3 | hCoV-19/USA/ID-IBL-633404/2020 | E | 124 | H | 1 | 20200721 |
| EPI_ISL_19644727 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBE15583/2024 | E | 124 | V | 234 | 20241223 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 124 | T | 4 | 20220210 |
| EPI_ISL_19825976 | NSP3 | hCoV-19/Singapore/Y25R15MSC55/2025 | E | 124 | G | 1276 | 20250407 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | E | 124 | R | 1 | 20210805 |
| EPI_ISL_19667010 | NSP3 | hCoV-19/Denmark/DCGC-691341/2024 | E | 124 | D | 374 | 20241216 |
| EPI_ISL_19785810 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147897/2025 | E | 124 | A | 149 | 20250304 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | E | 124 | del | 140 | 20240802 |
| EPI_ISL_19793803 | NSP3 | hCoV-19/Canada/AB-ABPHL-131397/2025 | P | 125 | S | 4769 | 20250304 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | P | 125 | G | 1 | 20201004 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | P | 125 | M | 11 | 20221224 |
| EPI_ISL_14588276 | NSP3 | hCoV-19/USA/ID-IBL-844610/2022 | P | 125 | H | 15 | 20220810 |
| EPI_ISL_19347575 | NSP3 | hCoV-19/USA/NY-CDC-LC1112089/2024 | P | 125 | del | 192 | 20240802 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | P | 125 | E | 2 | 20230408 |
| EPI_ISL_19795183 | NSP3 | hCoV-19/USA/NJ-CDC-LC1135110/2025 | P | 125 | L | 3056 | 20250309 |
| EPI_ISL_15527444 | NSP3 | hCoV-19/Chile/LI-120693/2022 | P | 125 | A | 26 | 20221017 |
| EPI_ISL_19714108 | NSP3 | hCoV-19/Russia/SPE-RII-MH217986S/2024 | P | 125 | Q | 83 | 20241210 |
| EPI_ISL_19691973 | NSP3 | hCoV-19/Canada/ON-PHL-202502315/2025 | P | 125 | T | 123 | 20250119 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | P | 125 | C | 1 | 20230413 |
| EPI_ISL_19014042 | NSP3 | hCoV-19/Japan/7517659_S41/2024 | P | 125 | R | 75 | 20240118 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | P | 125 | D | 1 | 20230217 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | P | 125 | I | 9 | 20230401 |
| EPI_ISL_15879330 | NSP3 | hCoV-19/USA/TN-5-44807-3/2021 | S | 126 | insKSVKV | 1 | 20210202 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | S | 126 | I | 13 | 20211102 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | S | 126 | T | 80 | 20240316 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | S | 126 | N | 7 | 20230401 |
| EPI_ISL_19650469 | NSP3 | hCoV-19/Spain/CU-80773/2024 | S | 126 | A | 154 | 20241011 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | S | 126 | Q | 16 | 20230420 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 126 | C | 1 | 20210318 |
| EPI_ISL_19718016 | NSP3 | hCoV-19/Finland/THL-01406/2025 | S | 126 | del | 230 | 20250127 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | S | 126 | D | 4 | 20230413 |
| EPI_ISL_19824824 | NSP3 | hCoV-19/Spain/PV-HUD-39370314/2025 | S | 126 | L | 46745 | 20250404 |
| EPI_ISL_17987709 | NSP3 | hCoV-19/Shanghai/SCDC-XG06-9735/2023 | S | 126 | V | 1 | 20230624 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | S | 126 | G | 2 | 20211015 |
| EPI_ISL_19640725 | NSP3 | hCoV-19/Canada/SK-RRPL-757574/2024 | S | 126 | Y | 2 | 20241207 |
| EPI_ISL_18269009 | NSP3 | hCoV-19/USA/MS-MSPHL-0538/2023 | S | 126 | stop | 5 | 20230815 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | S | 126 | R | 2 | 20231117 |
| EPI_ISL_14788856 | NSP3 | hCoV-19/Ireland/G-MUH-N315/2022 | S | 126 | insTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEXFEPS | 1 | 20220812 |
| EPI_ISL_14588276 | NSP3 | hCoV-19/USA/ID-IBL-844610/2022 | S | 126 | H | 1 | 20220810 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | S | 126 | M | 2 | 20211006 |
| EPI_ISL_11385204 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-49/2022 | S | 126 | K | 2 | 20220225 |
| EPI_ISL_19802646 | NSP3 | hCoV-19/Japan/FR055-0148/2025 | S | 126 | P | 1512 | 20250305 |
| EPI_ISL_3543375 | NSP3 | hCoV-19/USA/ID-IBL-631523/2020 | T | 127 | insL | 1 | 20200716 |
| EPI_ISL_19756503 | NSP3 | hCoV-19/Russia/SPE-RII-MH223094S/2025 | T | 127 | I | 2341 | 20250109 |
| EPI_ISL_18971666 | NSP3 | hCoV-19/Shanghai/SCDC-HG0208-385/2024 | T | 127 | P | 14 | 20240206 |
| EPI_ISL_19301045 | NSP3 | hCoV-19/Spain/VC-CVA_LAFE-124519/2024 | T | 127 | A | 121 | 20240320 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | T | 127 | H | 7 | 20220703 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | T | 127 | insIstopV | 1 | 20220118 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | T | 127 | M | 9 | 20221224 |
| EPI_ISL_19684348 | NSP3 | hCoV-19/Japan/FR049-1205/2024 | T | 127 | del | 219 | 20241216 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | T | 127 | E | 1 | 20210727 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | T | 127 | L | 19 | 20240316 |
| EPI_ISL_19659016 | NSP3 | hCoV-19/South Korea/KDCA296602/2024 | T | 127 | S | 22 | 20240801 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | T | 127 | K | 2 | 20230420 |
| EPI_ISL_3556871 | NSP3 | hCoV-19/USA/ID-IBL-634211/2020 | T | 127 | R | 1 | 20200723 |
| EPI_ISL_3411058 | NSP3 | hCoV-19/USA/WA-CDC-UW21073148473/2021 | T | 127 | C | 1 | 20210731 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | T | 127 | V | 6 | 20220727 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | T | 127 | G | 1 | 20230413 |
| EPI_ISL_19803193 | NSP3 | hCoV-19/France/IDF-RELAB-IPP02956/2025 | T | 127 | N | 1186 | 20250217 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | T | 127 | Q | 1 | 20220804 |
| EPI_ISL_7551900 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100221-1078/2021 | Q | 128 | insIstopVW | 2 | 20211002 |
| EPI_ISL_19374067 | NSP3 | hCoV-19/Japan/FR067-0189/2024 | Q | 128 | P | 44 | 20240807 |
| EPI_ISL_19014042 | NSP3 | hCoV-19/Japan/7517659_S41/2024 | Q | 128 | E | 16 | 20240118 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | Q | 128 | S | 16 | 20230422 |
| EPI_ISL_9979075 | NSP3 | hCoV-19/France/IDF-HMN-22022090243/2022 | Q | 128 | Z | 2 | 20220207 |
| EPI_ISL_15857504 | NSP3 | hCoV-19/Thailand/NIC_TRG_24148/2022 | Q | 128 | K | 31 | 20221019 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | Q | 128 | V | 12 | 20231117 |
| EPI_ISL_19646328 | NSP3 | hCoV-19/Slovenia/IMI-V1-15124/2024 | Q | 128 | R | 515 | 20241230 |
| EPI_ISL_9190968 | NSP3 | hCoV-19/Chile/RM-199374/2021 | Q | 128 | G | 4 | 20211228 |
| EPI_ISL_14588276 | NSP3 | hCoV-19/USA/ID-IBL-844610/2022 | Q | 128 | M | 2 | 20220810 |
| EPI_ISL_19684348 | NSP3 | hCoV-19/Japan/FR049-1205/2024 | Q | 128 | del | 218 | 20241216 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Q | 128 | I | 5 | 20230420 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | Q | 128 | W | 1 | 20220118 |
| EPI_ISL_19600426 | NSP3 | hCoV-19/USA/CA-CDPH-6000021027/2024 | Q | 128 | L | 110 | 20240917 |
| EPI_ISL_17434096 | NSP3 | hCoV-19/India/DL-779649830/2022 | Q | 128 | stop | 6 | 20221006 |
| EPI_ISL_19006628 | NSP3 | hCoV-19/England/CLIMB-CM7YGS46/2024 | Q | 128 | H | 95 | 20240313 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Q | 128 | D | 2 | 20220210 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | Q | 128 | Y | 2 | 20221119 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | Q | 128 | N | 9 | 20220128 |
| EPI_ISL_7178236 | NSP3 | hCoV-19/USA/IL-CDC-ASC210484152/2021 | Q | 128 | insSNFLGNLIIstopTHPEKLGHLIKAF | 2 | 20211117 |
| EPI_ISL_14770298 | NSP3 | hCoV-19/USA/AZ-ASU89656/2022 | Y | 129 | D | 2 | 20220823 |
| EPI_ISL_3543382 | NSP3 | hCoV-19/USA/ID-IBL-632544/2020 | Y | 129 | insstopVWYstopRstopLPRstop | 1 | 20200718 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | Y | 129 | insstop | 1 | 20210809 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | Y | 129 | S | 6 | 20230422 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | Y | 129 | E | 2 | 20230413 |
| EPI_ISL_19684348 | NSP3 | hCoV-19/Japan/FR049-1205/2024 | Y | 129 | del | 193 | 20241216 |
| EPI_ISL_15005651 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1112/2021 | Y | 129 | K | 2 | 20211009 |
| EPI_ISL_18731873 | NSP3 | hCoV-19/USA/IL-RIPHL_62314_G/2023 | Y | 129 | stop | 9 | 20231117 |
| EPI_ISL_3923063 | NSP3 | hCoV-19/USA/ID-IBL-749041/2021 | Y | 129 | insQLN | 1 | 20210813 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | Y | 129 | Q | 9 | 20230217 |
| EPI_ISL_19806390 | NSP3 | hCoV-19/Canada/ON-HRL-20251018874872-v1/2025 | Y | 129 | C | 411 | 20250220 |
| EPI_ISL_19793542 | NSP3 | hCoV-19/USA/MN-MDH-46454/2025 | Y | 129 | H | 9739 | 20250227 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | Y | 129 | M | 11 | 20230405 |
| EPI_ISL_13054714 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-98019/2022 | Y | 129 | I | 12 | 20220521 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | Y | 129 | V | 3 | 20240316 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | Y | 129 | F | 37 | 20230928 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Y | 129 | T | 1 | 20230420 |
| EPI_ISL_15527444 | NSP3 | hCoV-19/Chile/LI-120693/2022 | Y | 129 | P | 4 | 20221017 |
| EPI_ISL_16302381 | NSP3 | hCoV-19/Israel/SMC-7110826/2022 | Y | 129 | N | 33 | 20221206 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | Y | 129 | L | 16 | 20221224 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 130 | F | 1 | 20210318 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | E | 130 | P | 1 | 20210727 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | E | 130 | N | 8 | 20220703 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 130 | T | 4 | 20230420 |
| EPI_ISL_19704127 | NSP3 | hCoV-19/USA/NE-RP250651/2025 | E | 130 | D | 719 | 20250106 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | E | 130 | R | 3 | 20230405 |
| EPI_ISL_18207844 | NSP3 | hCoV-19/Brazil/AL-FIOCRUZ-6579/2023 | E | 130 | A | 80 | 20230607 |
| EPI_ISL_19717332 | NSP3 | hCoV-19/Australia/QLD0x015197/2025 | E | 130 | G | 135 | 20250126 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | E | 130 | L | 3 | 20221119 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | E | 130 | V | 57 | 20230401 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | E | 130 | W | 5 | 20230217 |
| EPI_ISL_15684511 | NSP3 | hCoV-19/Hong Kong/HK-HKPU-PU22MM041737/2022 | E | 130 | Q | 8 | 20220408 |
| EPI_ISL_19773633 | NSP3 | hCoV-19/USA/CA-CDPH-500145794/2025 | E | 130 | del | 406 | 20250118 |
| EPI_ISL_19444130 | NSP3 | hCoV-19/Australia/WA16381/2024 | E | 130 | K | 62 | 20240906 |
| EPI_ISL_16997919 | NSP3 | hCoV-19/Slovenia/068249-MB/2022 | E | 130 | stop | 17 | 20221227 |
| EPI_ISL_14300318 | NSP3 | hCoV-19/England/PHEC-YYGMATJ/2022 | E | 130 | Z | 2 | 20220722 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | E | 130 | S | 13 | 20230422 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 130 | H | 1 | 20220210 |
| EPI_ISL_13777241 | NSP3 | hCoV-19/Israel/SMC-7086957/2022 | Y | 131 | stop | 3 | 20220703 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | Y | 131 | I | 3 | 20210801 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | Y | 131 | F | 12 | 20221119 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | Y | 131 | P | 3 | 20230928 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | Y | 131 | W | 3 | 20230401 |
| EPI_ISL_19550818 | NSP3 | hCoV-19/USA/CA-SCPHL-24WGS00916/2024 | Y | 131 | H | 48 | 20241031 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | Y | 131 | V | 7 | 20230217 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | Y | 131 | R | 3 | 20220118 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | Y | 131 | Q | 1 | 20210727 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Y | 131 | T | 3 | 20230420 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Y | 131 | L | 4 | 20220210 |
| EPI_ISL_15527444 | NSP3 | hCoV-19/Chile/LI-120693/2022 | Y | 131 | E | 2 | 20221017 |
| EPI_ISL_18936265 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00181/2023 | Y | 131 | S | 7 | 20230422 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | Y | 131 | D | 14 | 20230413 |
| EPI_ISL_19773633 | NSP3 | hCoV-19/USA/CA-CDPH-500145794/2025 | Y | 131 | del | 358 | 20250118 |
| EPI_ISL_19518992 | NSP3 | hCoV-19/USA/NY-PRL-241022_83C04/2024 | Y | 131 | C | 562 | 20241015 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | Y | 131 | M | 27 | 20230405 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | G | 132 | Q | 1 | 20230420 |
| EPI_ISL_17344611 | NSP3 | hCoV-19/Israel/ICH-741197121/2023 | G | 132 | C | 27 | 20230322 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 132 | N | 3 | 20220210 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | G | 132 | stop | 4 | 20220118 |
| EPI_ISL_15346103 | NSP3 | hCoV-19/Japan/TKYmbc9368/2022 | G | 132 | A | 3 | 20220823 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | G | 132 | E | 4 | 20230413 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | G | 132 | T | 1 | 20220210 |
| EPI_ISL_6658889 | NSP3 | hCoV-19/USA/MN-CDC-IBX825798438360/2021 | G | 132 | R | 15 | 20211105 |
| EPI_ISL_19786574 | NSP3 | hCoV-19/Brazil/AL-LACENAL-270293049/2025 | G | 132 | S | 395 | 20250120 |
| EPI_ISL_17021243 | NSP3 | hCoV-19/Chile/TA-199237/2021 | G | 132 | W | 7 | 20211227 |
| EPI_ISL_19821923 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136040/2025 | G | 132 | D | 570 | 20250327 |
| EPI_ISL_19140424 | NSP3 | hCoV-19/Australia/TAS007158/2024 | G | 132 | V | 544 | 20240311 |
| EPI_ISL_19640725 | NSP3 | hCoV-19/Canada/SK-RRPL-757574/2024 | G | 132 | del | 117 | 20241207 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | G | 132 | K | 2 | 20230405 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | G | 132 | Y | 1 | 20210716 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | G | 132 | L | 3 | 20210727 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | G | 132 | I | 9 | 20221224 |
| EPI_ISL_13940562 | NSP3 | hCoV-19/Germany/BW-RKI-I-907361/2022 | T | 133 | P | 5 | 20220707 |
| EPI_ISL_18936203 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00048/2023 | T | 133 | G | 2 | 20230411 |
| EPI_ISL_19812830 | NSP3 | hCoV-19/USA/NE-RP252157/2025 | T | 133 | I | 7444 | 20250323 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | T | 133 | stop | 2 | 20220727 |
| EPI_ISL_3556854 | NSP3 | hCoV-19/USA/ID-IBL-633404/2020 | T | 133 | H | 1 | 20200721 |
| EPI_ISL_19640725 | NSP3 | hCoV-19/Canada/SK-RRPL-757574/2024 | T | 133 | del | 58 | 20241207 |
| EPI_ISL_19821924 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136323/2025 | T | 133 | N | 225 | 20250327 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | T | 133 | E | 3 | 20221119 |
| EPI_ISL_16948502 | NSP3 | hCoV-19/Japan/PG-435720/2023 | T | 133 | S | 333 | 20230110 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | T | 133 | K | 1 | 20230405 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | T | 133 | insL | 1 | 20220118 |
| EPI_ISL_18936247 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00138/2023 | T | 133 | L | 15 | 20230419 |
| EPI_ISL_9526762 | NSP3 | hCoV-19/USA/CT-CDC-ASC210584604/2022 | T | 133 | C | 1 | 20220112 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | T | 133 | D | 1 | 20230413 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | T | 133 | V | 1 | 20220118 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | T | 133 | Q | 3 | 20230217 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | T | 133 | M | 7 | 20220703 |
| EPI_ISL_19760176 | NSP3 | hCoV-19/USA/AZ-CDC-LC1133694/2025 | T | 133 | A | 608 | 20250212 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | T | 133 | Y | 5 | 20211102 |
| EPI_ISL_15157244 | NSP3 | hCoV-19/India/GA-NCCS-3055200215425/2021 | E | 134 | insMITKV | 1 | 20211206 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | E | 134 | insGIR | 1 | 20230217 |
| EPI_ISL_19635362 | NSP3 | hCoV-19/USA/CO-CDPHE-42590937/2024 | E | 134 | K | 1045 | 20241214 |
| EPI_ISL_19693528 | NSP3 | hCoV-19/Brazil/PB-IEC-25-001618/2025 | E | 134 | V | 321 | 20250108 |
| EPI_ISL_18421668 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y8EUZ/2023 | E | 134 | Q | 1099 | 20231009 |
| EPI_ISL_19667191 | NSP3 | hCoV-19/Denmark/DCGC-691393/2024 | E | 134 | D | 613 | 20241230 |
| EPI_ISL_3556871 | NSP3 | hCoV-19/USA/ID-IBL-634211/2020 | E | 134 | I | 1 | 20200723 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | E | 134 | S | 4 | 20221119 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | E | 134 | P | 4 | 20230413 |
| EPI_ISL_18489437 | NSP3 | hCoV-19/England/CLIMB-CM7YFIX9/2023 | E | 134 | Z | 12 | 20231029 |
| EPI_ISL_3543393 | NSP3 | hCoV-19/USA/ID-IBL-632632/2020 | E | 134 | insMVL | 1 | 20200719 |
| EPI_ISL_19819641 | NSP3 | hCoV-19/Spain/GA-SCQ_148247/2025 | E | 134 | G | 439 | 20250310 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | E | 134 | R | 2 | 20211222 |
| EPI_ISL_15005651 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1112/2021 | E | 134 | H | 1 | 20211009 |
| EPI_ISL_9301830 | NSP3 | hCoV-19/USA/WA-UW-22010402821/2022 | E | 134 | stop | 12 | 20220104 |
| EPI_ISL_19640725 | NSP3 | hCoV-19/Canada/SK-RRPL-757574/2024 | E | 134 | del | 71 | 20241207 |
| EPI_ISL_11385204 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-49/2022 | E | 134 | N | 4 | 20220225 |
| EPI_ISL_18021300 | NSP3 | hCoV-19/Wales/QEUH-2E9FBECD/2022 | E | 134 | insSVAK | 6 | 20220328 |
| EPI_ISL_19227830 | NSP3 | hCoV-19/Singapore/R36MQ45/2024 | E | 134 | A | 201 | 20240603 |
| EPI_ISL_18444916 | NSP3 | hCoV-19/Singapore/R78MR209/2023 | D | 135 | B | 10 | 20231025 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 135 | I | 2 | 20220210 |
| EPI_ISL_19775845 | NSP3 | hCoV-19/USA/CO-CDPHE-43093619/2025 | D | 135 | E | 64 | 20250220 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | D | 135 | L | 7 | 20220703 |
| EPI_ISL_4647835 | NSP3 | hCoV-19/Japan/PG-105260/2021 | D | 135 | C | 1 | 20210823 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | D | 135 | R | 7 | 20220118 |
| EPI_ISL_19737361 | NSP3 | hCoV-19/USA/MN-MDH-46077/2025 | D | 135 | G | 563 | 20250128 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | D | 135 | M | 6 | 20220118 |
| EPI_ISL_18811823 | NSP3 | hCoV-19/Sweden/T-48922555052/2023 | D | 135 | V | 50 | 20231203 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | D | 135 | P | 1 | 20230413 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | D | 135 | S | 1 | 20210727 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 135 | K | 2 | 20210318 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | D | 135 | stop | 2 | 20211222 |
| EPI_ISL_19821845 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136199/2025 | D | 135 | Y | 4776 | 20250325 |
| EPI_ISL_19640725 | NSP3 | hCoV-19/Canada/SK-RRPL-757574/2024 | D | 135 | del | 70 | 20241207 |
| EPI_ISL_17280583 | NSP3 | hCoV-19/Australia/NSW-ICPMR-43768/2023 | D | 135 | H | 23 | 20230315 |
| EPI_ISL_19803550 | NSP3 | hCoV-19/USA/WI-WSLH-2500751/2025 | D | 135 | N | 1189 | 20250204 |
| EPI_ISL_19771467 | NSP3 | hCoV-19/USA/NY-PRL-250304_82D11/2025 | D | 135 | A | 222 | 20250219 |
| EPI_ISL_14333822 | NSP3 | hCoV-19/USA/ID-IBL-840748/2022 | D | 136 | stop | 8 | 20220727 |
| EPI_ISL_19512558 | NSP3 | hCoV-19/England/CLIMB-CM7YMBD7/2024 | D | 136 | E | 123 | 20241010 |
| EPI_ISL_15157244 | NSP3 | hCoV-19/India/GA-NCCS-3055200215425/2021 | D | 136 | L | 1 | 20211206 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | D | 136 | I | 9 | 20230405 |
| EPI_ISL_15634712 | NSP3 | hCoV-19/Denmark/DCGC-604683/2022 | D | 136 | insD | 2 | 20221024 |
| EPI_ISL_19504390 | NSP3 | hCoV-19/Canada/AB-ABPHL-124550/2024 | D | 136 | Y | 235 | 20241005 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | D | 136 | del | 72 | 20240315 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | D | 136 | insRstop | 1 | 20210716 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | D | 136 | K | 7 | 20220703 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | D | 136 | P | 1 | 20220210 |
| EPI_ISL_19793501 | NSP3 | hCoV-19/Japan/FPIPH-FR007-0011/2025 | D | 136 | A | 129 | 20250217 |
| EPI_ISL_17668179 | NSP3 | hCoV-19/Greece/NPHO-185125/2023 | D | 136 | V | 16 | 20230308 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | D | 136 | S | 2 | 20230420 |
| EPI_ISL_15005651 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1112/2021 | D | 136 | Q | 1 | 20211009 |
| EPI_ISL_18361846 | NSP3 | hCoV-19/Singapore/R71MR40/2023 | D | 136 | B | 7 | 20230928 |
| EPI_ISL_19681298 | NSP3 | hCoV-19/Germany/RP-RKI-I-1147167/2024 | D | 136 | G | 790 | 20241211 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | D | 136 | T | 6 | 20220117 |
| EPI_ISL_19767330 | NSP3 | hCoV-19/Wales/CLIMB-CM7YMGTZ/2025 | D | 136 | N | 236 | 20250222 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | D | 136 | insL | 6 | 20221224 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | D | 136 | R | 1 | 20230217 |
| EPI_ISL_18699623 | NSP3 | hCoV-19/USA/NY-Wadsworth-23066521-01/2023 | D | 136 | H | 20 | 20231109 |
| EPI_ISL_19670612 | NSP3 | hCoV-19/USA/IA-SHL-2557218/2025 | Y | 137 | H | 108 | 20250107 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | Y | 137 | S | 4 | 20230217 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Y | 137 | del | 69 | 20240315 |
| EPI_ISL_14584794 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16846/2022 | Y | 137 | E | 1 | 20220727 |
| EPI_ISL_5441282 | NSP3 | hCoV-19/USA/ID-IBL-758459/2021 | Y | 137 | insstopRstopLP | 1 | 20210915 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Y | 137 | G | 2 | 20230420 |
| EPI_ISL_14488424 | NSP3 | hCoV-19/USA/ID-IBL-842148/2022 | Y | 137 | stop | 4 | 20220802 |
| EPI_ISL_12583838 | NSP3 | hCoV-19/Turkey/HSGM-GS2767/2022 | Y | 137 | D | 7 | 20220407 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | Y | 137 | insstop | 1 | 20230401 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | Y | 137 | V | 1 | 20230405 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | Y | 137 | A | 2 | 20210727 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | Y | 137 | W | 9 | 20221224 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | Y | 137 | L | 7 | 20211222 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 137 | I | 1 | 20220210 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | Y | 137 | F | 9 | 20230413 |
| EPI_ISL_18693752 | NSP3 | hCoV-19/Australia/SA1128408/2023 | Y | 137 | C | 56 | 20231213 |
| EPI_ISL_9152980 | NSP3 | hCoV-19/USA/ID-IBL-785006/2022 | Y | 137 | T | 11 | 20220118 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | Y | 137 | M | 6 | 20220703 |
| EPI_ISL_19777545 | NSP3 | hCoV-19/France/PAC-RELAB-HCL725000034301/2025 | Y | 137 | N | 9 | 20250218 |
| EPI_ISL_11385204 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-49/2022 | Y | 137 | K | 1 | 20220225 |
| EPI_ISL_8049918 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7089/2021 | Q | 138 | T | 2 | 20211129 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | Q | 138 | F | 4 | 20220118 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | Q | 138 | I | 6 | 20220703 |
| EPI_ISL_19342691 | NSP3 | hCoV-19/Japan/FR051-0063/2024 | Q | 138 | L | 55 | 20240501 |
| EPI_ISL_19646578 | NSP3 | hCoV-19/France/PAC-RELAB-HCL024199131101/2024 | Q | 138 | R | 401 | 20241210 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | Q | 138 | G | 1 | 20210727 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | Q | 138 | V | 1 | 20230217 |
| EPI_ISL_17777425 | NSP3 | hCoV-19/Netherlands/ZH-LUMC-4280/2023 | Q | 138 | P | 15 | 20230309 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | Q | 138 | S | 2 | 20230413 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | Q | 138 | E | 3 | 20230217 |
| EPI_ISL_17021241 | NSP3 | hCoV-19/Chile/RM-199235/2021 | Q | 138 | A | 2 | 20211227 |
| EPI_ISL_3556844 | NSP3 | hCoV-19/USA/ID-IBL-633079/2020 | Q | 138 | W | 2 | 20200721 |
| EPI_ISL_19620010 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004208213/2024 | Q | 138 | H | 75 | 20241014 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 138 | Y | 2 | 20220210 |
| EPI_ISL_19459380 | NSP3 | hCoV-19/Spain/CB-HUMV-151968/2024 | Q | 138 | K | 193 | 20240626 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Q | 138 | D | 2 | 20230420 |
| EPI_ISL_19539567 | NSP3 | hCoV-19/Turkey/DEU-S45/2020 | Q | 138 | insGKPLEFGATSAALQPEEEQEEDWLDDDTEDDYQ | 1 | 20200821 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | Q | 138 | N | 9 | 20221224 |
| EPI_ISL_18357622 | NSP3 | hCoV-19/USA/WA-GBW-H10-016-9022/2023 | Q | 138 | stop | 11 | 20230927 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Q | 138 | del | 55 | 20240315 |
| EPI_ISL_19718248 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-145041/2025 | G | 139 | D | 305 | 20250120 |
| EPI_ISL_11507475 | NSP3 | hCoV-19/Turkey/HSGM-G7770/2022 | G | 139 | R | 7 | 20220311 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | G | 139 | N | 5 | 20220718 |
| EPI_ISL_3756838 | NSP3 | hCoV-19/USA/ID-IBL-747076/2021 | G | 139 | insR | 1 | 20210806 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | G | 139 | F | 1 | 20210727 |
| EPI_ISL_18134175 | NSP3 | hCoV-19/Japan/PG-554387/2023 | G | 139 | A | 8 | 20230706 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | G | 139 | T | 12 | 20220703 |
| EPI_ISL_19706581 | NSP3 | hCoV-19/Brazil/RJ-FIOCRUZ-13536/2024 | G | 139 | C | 126 | 20241210 |
| EPI_ISL_19080971 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-0787/2024 | G | 139 | V | 71 | 20240414 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | G | 139 | L | 9 | 20221224 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | G | 139 | Q | 2 | 20230420 |
| EPI_ISL_3759989 | NSP3 | hCoV-19/USA/ID-IBL-747479/2021 | G | 139 | insstop | 1 | 20210809 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | G | 139 | I | 3 | 20211222 |
| EPI_ISL_3756838 | NSP3 | hCoV-19/USA/ID-IBL-747076/2021 | G | 139 | E | 1 | 20210806 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | G | 139 | del | 57 | 20240315 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | G | 139 | K | 2 | 20230405 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | G | 139 | stop | 6 | 20230401 |
| EPI_ISL_19693332 | NSP3 | hCoV-19/USA/MI-UM-10061379474/2024 | G | 139 | S | 264 | 20241218 |
| EPI_ISL_18936149 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00083/2023 | K | 140 | Y | 1 | 20230413 |
| EPI_ISL_18210504 | NSP3 | hCoV-19/Denmark/DCGC-658932/2023 | K | 140 | T | 80 | 20230814 |
| EPI_ISL_11507475 | NSP3 | hCoV-19/Turkey/HSGM-G7770/2022 | K | 140 | stop | 5 | 20220311 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | K | 140 | L | 3 | 20230401 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | K | 140 | V | 8 | 20221224 |
| EPI_ISL_19516807 | NSP3 | hCoV-19/USA/CA-Stanford-197_S08/2024 | K | 140 | Q | 7 | 20240912 |
| EPI_ISL_19387734 | NSP3 | hCoV-19/Italy/UMB-LAOP-161-3-23/2024 | K | 140 | N | 209 | 20240816 |
| EPI_ISL_9191019 | NSP3 | hCoV-19/Chile/RM-199381/2021 | K | 140 | A | 6 | 20211228 |
| EPI_ISL_19757043 | NSP3 | hCoV-19/Sweden/S-1261055811R4/2025 | K | 140 | E | 412 | 20250210 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | K | 140 | S | 1 | 20220718 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | K | 140 | del | 55 | 20240315 |
| EPI_ISL_19804885 | NSP3 | hCoV-19/USA/NM-USAFSAM-S23506/2025 | K | 140 | I | 76 | 20250303 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | K | 140 | G | 2 | 20230217 |
| EPI_ISL_19749696 | NSP3 | hCoV-19/USA/AZ-CDC-LC1132278/2025 | K | 140 | R | 670 | 20250206 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | P | 141 | I | 3 | 20220718 |
| EPI_ISL_19788842 | NSP3 | hCoV-19/Wales/CLIMB-CM7YR8YI/2025 | P | 141 | L | 1278 | 20250303 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | P | 141 | V | 8 | 20220703 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | P | 141 | del | 55 | 20240315 |
| EPI_ISL_9191080 | NSP3 | hCoV-19/Chile/RM-199232/2021 | P | 141 | C | 2 | 20211227 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | P | 141 | stop | 2 | 20210815 |
| EPI_ISL_19790237 | NSP3 | hCoV-19/Netherlands/NH-RIVM-145201/2025 | P | 141 | T | 367 | 20250224 |
| EPI_ISL_17881533 | NSP3 | hCoV-19/Japan/PG-526761/2023 | P | 141 | F | 5 | 20230502 |
| EPI_ISL_19735543 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56362/2025 | P | 141 | H | 241 | 20250205 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | P | 141 | W | 5 | 20220118 |
| EPI_ISL_19130325 | NSP3 | hCoV-19/South Korea/KDCA292483/2024 | P | 141 | A | 33 | 20240412 |
| EPI_ISL_15982748 | NSP3 | hCoV-19/Brazil/MG_LBI_1266/2021 | P | 141 | insF | 1 | 20211221 |
| EPI_ISL_19826570 | NSP3 | hCoV-19/USA/NY-PRL-250408_82F10/2025 | P | 141 | S | 30268 | 20250325 |
| EPI_ISL_9191019 | NSP3 | hCoV-19/Chile/RM-199381/2021 | P | 141 | D | 5 | 20211228 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | P | 141 | Q | 5 | 20230217 |
| EPI_ISL_16987500 | NSP3 | hCoV-19/Canada/QC-LSPQ-L00584535001/2023 | P | 141 | N | 4 | 20230206 |
| EPI_ISL_18672120 | NSP3 | hCoV-19/Henan/KFCDC128/2023 | P | 141 | R | 3 | 20231118 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | P | 141 | G | 3 | 20230420 |
| EPI_ISL_9191019 | NSP3 | hCoV-19/Chile/RM-199381/2021 | L | 142 | A | 5 | 20211228 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | L | 142 | del | 48 | 20240315 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | L | 142 | insstop | 1 | 20230401 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | L | 142 | I | 9 | 20220718 |
| EPI_ISL_3543369 | NSP3 | hCoV-19/USA/ID-IBL-630925/2020 | L | 142 | insW | 1 | 20200714 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | L | 142 | V | 53 | 20230420 |
| EPI_ISL_19297242 | NSP3 | hCoV-19/Russia/AMU-RII-MH192297S/2024 | L | 142 | M | 26 | 20240421 |
| EPI_ISL_17211184 | NSP3 | hCoV-19/env/France/NAQ-CHUL-57-43/2023 | L | 142 | stop | 12 | 20230207 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | L | 142 | R | 2 | 20230401 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | L | 142 | P | 2 | 20211222 |
| EPI_ISL_19608424 | NSP3 | hCoV-19/Germany/BB-RKI-I-1146658/2024 | L | 142 | F | 297 | 20241125 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | L | 142 | T | 1 | 20230217 |
| EPI_ISL_17013912 | NSP3 | hCoV-19/Australia/NSW-ICPMR-42491/2023 | L | 142 | W | 19 | 20230209 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | L | 142 | insGIWC | 1 | 20211009 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | L | 142 | N | 8 | 20230419 |
| EPI_ISL_19469186 | NSP3 | hCoV-19/env/Ukraine/86377/2024 | L | 142 | S | 71 | 20240729 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | L | 142 | E | 1 | 20211019 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | L | 142 | C | 7 | 20220726 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 142 | Q | 1 | 20210318 |
| EPI_ISL_4348472 | NSP3 | hCoV-19/Thailand/ChaiNat_SEQ16151/2021 | L | 142 | insXXXXXXXXXXX | 1 | 20210905 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | L | 142 | Y | 4 | 20230928 |
| EPI_ISL_18512024 | NSP3 | hCoV-19/USA/RI-RISHL-E06904/2023 | E | 143 | Q | 17 | 20230920 |
| EPI_ISL_19661665 | NSP3 | hCoV-19/New Zealand/24YA7859/2024 | E | 143 | K | 374 | 20241210 |
| EPI_ISL_17715547 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-18/2023 | E | 143 | N | 9 | 20230429 |
| EPI_ISL_8049918 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7089/2021 | E | 143 | insXXXXXXXXNDESGD | 1 | 20211129 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 143 | T | 4 | 20230420 |
| EPI_ISL_17741741 | NSP3 | hCoV-19/South Korea/KDCA391510/2021 | E | 143 | insLL | 3 | 20211113 |
| EPI_ISL_3556871 | NSP3 | hCoV-19/USA/ID-IBL-634211/2020 | E | 143 | insRstopT | 1 | 20200723 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | E | 143 | L | 13 | 20220703 |
| EPI_ISL_6917388 | NSP3 | hCoV-19/England/BRBR-2BE1D76/2021 | E | 143 | Z | 3 | 20211125 |
| EPI_ISL_19458823 | NSP3 | hCoV-19/France/BFC-RELAB-IPP10487/2024 | E | 143 | D | 105 | 20240909 |
| EPI_ISL_6949418 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-50609/2020 | E | 143 | stop | 2 | 20200717 |
| EPI_ISL_18830084 | NSP3 | hCoV-19/Germany/BY-MVP-000023836/2024 | E | 143 | V | 62 | 20240102 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | E | 143 | R | 2 | 20220726 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | E | 143 | H | 6 | 20220118 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | E | 143 | del | 50 | 20240315 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | E | 143 | S | 3 | 20230405 |
| EPI_ISL_19389302 | NSP3 | hCoV-19/Spain/MC-HCUVA-12015476/2024 | E | 143 | G | 127 | 20240727 |
| EPI_ISL_3556871 | NSP3 | hCoV-19/USA/ID-IBL-634211/2020 | E | 143 | P | 1 | 20200723 |
| EPI_ISL_19715680 | NSP3 | hCoV-19/USA/NY-NYULH-22007/2025 | E | 143 | A | 77 | 20250120 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | F | 144 | W | 8 | 20220703 |
| EPI_ISL_10033108 | NSP3 | hCoV-19/France/BFC-HMN-22012110052/2022 | F | 144 | N | 1 | 20220103 |
| EPI_ISL_9519761 | NSP3 | hCoV-19/France/IDF-HMN-22012240663/2022 | F | 144 | A | 1 | 20220124 |
| EPI_ISL_19074529 | NSP3 | hCoV-19/Japan/FR008-0071/2024 | F | 144 | V | 69 | 20240301 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | F | 144 | R | 2 | 20220726 |
| EPI_ISL_19739279 | NSP3 | hCoV-19/Netherlands/UT-RIVM-145095/2025 | F | 144 | L | 382 | 20250131 |
| EPI_ISL_3636272 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ13948/2021 | F | 144 | G | 2 | 20210806 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | F | 144 | T | 3 | 20230217 |
| EPI_ISL_16365408 | NSP3 | hCoV-19/Germany/ST-MD12669/2022 | F | 144 | S | 34 | 20221208 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | F | 144 | D | 1 | 20211019 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | F | 144 | del | 45 | 20240315 |
| EPI_ISL_19829406 | NSP3 | hCoV-19/USA/DC-CDC-2-8365466/2025 | F | 144 | I | 21 | 20250125 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | F | 144 | H | 2 | 20230405 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | F | 144 | Q | 2 | 20230420 |
| EPI_ISL_19608394 | NSP3 | hCoV-19/Germany/RP-RKI-I-1146626/2024 | F | 144 | Y | 26 | 20241112 |
| EPI_ISL_18476093 | NSP3 | hCoV-19/Cyprus/BMV8502/2022 | F | 144 | C | 205 | 20220725 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | F | 144 | K | 1 | 20230419 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | G | 145 | Q | 4 | 20230420 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | G | 145 | insIW | 2 | 20230401 |
| EPI_ISL_10830735 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83863/2022 | G | 145 | W | 4 | 20220119 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | G | 145 | del | 43 | 20240315 |
| EPI_ISL_19825996 | NSP3 | hCoV-19/Singapore/Y25R15MSC76/2025 | G | 145 | D | 2351 | 20250408 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | G | 145 | I | 1 | 20230217 |
| EPI_ISL_19756678 | NSP3 | hCoV-19/Australia/QLD0x015235/2025 | G | 145 | S | 1845 | 20250208 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | G | 145 | N | 10 | 20220703 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | G | 145 | H | 2 | 20221119 |
| EPI_ISL_19822733 | NSP3 | hCoV-19/Finland/THL-01162/2025 | G | 145 | C | 5714 | 20250306 |
| EPI_ISL_17766977 | NSP3 | hCoV-19/Morocco/INH-261305/2021 | G | 145 | M | 1 | 20210115 |
| EPI_ISL_18293400 | NSP3 | hCoV-19/South Korea/KDCA263588/2023 | G | 145 | R | 55 | 20230828 |
| EPI_ISL_18716165 | NSP3 | hCoV-19/USA/VA-CDC-LC1077804/2023 | G | 145 | A | 11 | 20231223 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | G | 145 | stop | 2 | 20220726 |
| EPI_ISL_17053674 | NSP3 | hCoV-19/USA/CA-GBW-H20-292-6183/2023 | G | 145 | insIC | 4 | 20230216 |
| EPI_ISL_5352049 | NSP3 | hCoV-19/Japan/20210502-23626/2021 | G | 145 | F | 1 | 20210502 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | G | 145 | K | 2 | 20230419 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 145 | L | 2 | 20220210 |
| EPI_ISL_18512404 | NSP3 | hCoV-19/France/OCC-CHU-TLS-2328213462/2023 | G | 145 | Y | 4 | 20231009 |
| EPI_ISL_19351648 | NSP3 | hCoV-19/Netherlands/OV-RIVM-140667/2024 | G | 145 | V | 347 | 20240722 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | A | 146 | Q | 3 | 20230217 |
| EPI_ISL_19486305 | NSP3 | hCoV-19/USA/OK-KVI401137/2024 | A | 146 | D | 124 | 20240923 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | A | 146 | M | 2 | 20221119 |
| EPI_ISL_19550234 | NSP3 | hCoV-19/Sichuan/BZCDC-0315/2024 | A | 146 | S | 689 | 20240908 |
| EPI_ISL_19317607 | NSP3 | hCoV-19/USA/TX-HMH-M-142399/2024 | A | 146 | G | 28 | 20240711 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | A | 146 | E | 1 | 20210424 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | A | 146 | del | 34 | 20240315 |
| EPI_ISL_19032949 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6354/2024 | A | 146 | F | 5 | 20240120 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | A | 146 | H | 2 | 20210815 |
| EPI_ISL_18603035 | NSP3 | hCoV-19/USA/CA-CDPH-500124712/2023 | A | 146 | I | 2 | 20230818 |
| EPI_ISL_19819725 | NSP3 | hCoV-19/Singapore/Y25R14MSC103/2025 | A | 146 | V | 5426 | 20250326 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | A | 146 | C | 11 | 20230401 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | A | 146 | N | 1 | 20220728 |
| EPI_ISL_19819900 | NSP3 | hCoV-19/Canada/ON-HRL-20251019288719-v1/2025 | A | 146 | T | 641 | 20250311 |
| EPI_ISL_19388964 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YJJFZ/2024 | A | 146 | P | 14 | 20240815 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | A | 146 | L | 17 | 20230405 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | A | 146 | Y | 2 | 20210727 |
| EPI_ISL_8049918 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7089/2021 | T | 147 | insXXXXXXX | 1 | 20211129 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | T | 147 | V | 7 | 20220703 |
| EPI_ISL_17741741 | NSP3 | hCoV-19/South Korea/KDCA391510/2021 | T | 147 | R | 3 | 20211113 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | T | 147 | F | 1 | 20210815 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | T | 147 | E | 3 | 20230419 |
| EPI_ISL_19761606 | NSP3 | hCoV-19/USA/NY-URMC-P3S1U036-1/2025 | T | 147 | A | 324 | 20250123 |
| EPI_ISL_19758263 | NSP3 | hCoV-19/USA/MN-MDH-46226/2025 | T | 147 | I | 1707 | 20250208 |
| EPI_ISL_19768157 | NSP3 | hCoV-19/France/OCC-RELAB-HCL725000034001/2025 | T | 147 | N | 387 | 20250211 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | T | 147 | D | 2 | 20230420 |
| EPI_ISL_17766977 | NSP3 | hCoV-19/Morocco/INH-261305/2021 | T | 147 | C | 1 | 20210115 |
| EPI_ISL_17715547 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-18/2023 | T | 147 | L | 10 | 20230429 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | T | 147 | H | 2 | 20230401 |
| EPI_ISL_19515758 | NSP3 | hCoV-19/Japan/FR049-1076/2024 | T | 147 | P | 126 | 20241016 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | T | 147 | Y | 1 | 20221119 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | T | 147 | del | 27 | 20240315 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 147 | K | 2 | 20220210 |
| EPI_ISL_19374243 | NSP3 | hCoV-19/Guatemala/0950-DLNS/2024 | T | 147 | S | 74 | 20240727 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | S | 148 | D | 2 | 20230420 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 148 | E | 1 | 20230217 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | S | 148 | I | 7 | 20230217 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | S | 148 | M | 1 | 20230405 |
| EPI_ISL_19829060 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136742/2025 | S | 148 | F | 2095 | 20250331 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | S | 148 | Q | 1 | 20210424 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | S | 148 | N | 1 | 20230217 |
| EPI_ISL_19192496 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16084/2024 | S | 148 | C | 13 | 20240411 |
| EPI_ISL_17741741 | NSP3 | hCoV-19/South Korea/KDCA391510/2021 | S | 148 | R | 3 | 20211113 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | S | 148 | del | 26 | 20240315 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | S | 148 | V | 1 | 20211019 |
| EPI_ISL_17715547 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-18/2023 | S | 148 | L | 11 | 20230429 |
| EPI_ISL_19617654 | NSP3 | hCoV-19/USA/WI-WSLH-2402797/2024 | S | 148 | A | 169 | 20241013 |
| EPI_ISL_19757290 | NSP3 | hCoV-19/Australia/QLD-PHV-FSS-1521D/2025 | S | 148 | P | 685 | 20250204 |
| EPI_ISL_19261466 | NSP3 | hCoV-19/England/CLIMB-CM7YRQ1M/2024 | S | 148 | T | 46 | 20240702 |
| EPI_ISL_6749618 | NSP3 | hCoV-19/South Korea/KDCA17415/2021 | S | 148 | insS | 5 | 20211024 |
| EPI_ISL_19795790 | NSP3 | hCoV-19/USA/MA-MASPHL-13765/2025 | S | 148 | Y | 175 | 20250220 |
| EPI_ISL_17097832 | NSP3 | hCoV-19/Sweden/14_SE300_DC23-001185/2023 | A | 149 | G | 22 | 20230119 |
| EPI_ISL_17715547 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-18/2023 | A | 149 | L | 16 | 20230429 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 149 | E | 3 | 20220210 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | A | 149 | N | 2 | 20230217 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | A | 149 | del | 22 | 20240315 |
| EPI_ISL_19814892 | NSP3 | hCoV-19/Canada/AB-ABPHL-131489/2025 | A | 149 | T | 1188 | 20250310 |
| EPI_ISL_19426475 | NSP3 | hCoV-19/USA/CA-Stanford-193_S23/2024 | A | 149 | P | 65 | 20240808 |
| EPI_ISL_19828730 | NSP3 | hCoV-19/USA/NY-GBW-GKPLAAAA55518/2025 | A | 149 | S | 1374 | 20250407 |
| EPI_ISL_19192496 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16084/2024 | A | 149 | C | 1 | 20240411 |
| EPI_ISL_19824831 | NSP3 | hCoV-19/Spain/PV-HUD-96050143/2025 | A | 149 | V | 7344 | 20250404 |
| EPI_ISL_19688311 | NSP3 | hCoV-19/Canada/SK-RRPL-761016/2024 | A | 149 | D | 391 | 20241106 |
| EPI_ISL_5352049 | NSP3 | hCoV-19/Japan/20210502-23626/2021 | A | 149 | F | 3 | 20210502 |
| EPI_ISL_12787733 | NSP3 | hCoV-19/France/GES-HMN-22042270452/2022 | A | 149 | insSALTL | 1 | 20220425 |
| EPI_ISL_16284105 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223292480/2022 | A | 149 | insALQPEEEQEKPLEFGATSA | 1 | 20221125 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | A | 149 | Q | 1 | 20230419 |
| EPI_ISL_2445020 | NSP3 | hCoV-19/USA/AZ-ASPHL-2278/2020 | A | 149 | M | 1 | 20200718 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | A | 150 | N | 1 | 20201004 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | A | 150 | Q | 1 | 20230419 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | A | 150 | del | 71 | 20240315 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | A | 150 | E | 11 | 20230217 |
| EPI_ISL_19357444 | NSP3 | hCoV-19/France/ARA-HCL024122630801/2024 | A | 150 | P | 28 | 20240802 |
| EPI_ISL_17741741 | NSP3 | hCoV-19/South Korea/KDCA391510/2021 | A | 150 | R | 4 | 20211113 |
| EPI_ISL_15900637 | NSP3 | hCoV-19/Germany/SN-RKI-I-1029212/2022 | A | 150 | insA | 2 | 20220809 |
| EPI_ISL_19050898 | NSP3 | hCoV-19/Chile/ML-26062/2024 | A | 150 | D | 546 | 20240328 |
| EPI_ISL_19758080 | NSP3 | hCoV-19/New Zealand/25YA0592/2025 | A | 150 | S | 142 | 20250221 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | A | 150 | stop | 6 | 20220118 |
| EPI_ISL_18752141 | NSP3 | hCoV-19/South Korea/KDCA280889/2023 | A | 150 | G | 18 | 20231207 |
| EPI_ISL_2768153 | NSP3 | hCoV-19/Japan/PG-52692/2021 | A | 150 | C | 2 | 20210517 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | A | 150 | F | 1 | 20221119 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | A | 150 | M | 1 | 20230405 |
| EPI_ISL_19820095 | NSP3 | hCoV-19/Canada/ON-SHL-202501327/2025 | A | 150 | T | 1474 | 20250323 |
| EPI_ISL_17715547 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-18/2023 | A | 150 | L | 28 | 20230429 |
| EPI_ISL_19829465 | NSP3 | hCoV-19/Brazil/RR-IEC-011688/2025 | A | 150 | V | 1861 | 20250319 |
| EPI_ISL_4057095 | NSP3 | hCoV-19/USA/AL-CDC-ASC210275516/2021 | L | 151 | N | 1 | 20210805 |
| EPI_ISL_19828117 | NSP3 | hCoV-19/Australia/QLD0x0154B9/2025 | L | 151 | F | 3707 | 20250329 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | L | 151 | del | 25 | 20240315 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | L | 151 | W | 1 | 20230420 |
| EPI_ISL_19192496 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16084/2024 | L | 151 | S | 5 | 20240411 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | L | 151 | M | 2 | 20230217 |
| EPI_ISL_19481003 | NSP3 | hCoV-19/USA/CO-CDPHE-42323432/2024 | L | 151 | H | 48 | 20240918 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | L | 151 | G | 2 | 20230419 |
| EPI_ISL_17275345 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45871/2023 | L | 151 | Y | 2 | 20230217 |
| EPI_ISL_19259827 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA11051-P0/2024 | L | 151 | R | 175 | 20240531 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 151 | T | 3 | 20220210 |
| EPI_ISL_18677694 | NSP3 | hCoV-19/Canada/AB-ABPHL-110804/2023 | L | 151 | J | 24 | 20231209 |
| EPI_ISL_19698064 | NSP3 | hCoV-19/Wales/CLIMB-CM7YK3WU/2025 | L | 151 | I | 194 | 20250116 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | L | 151 | E | 1 | 20210424 |
| EPI_ISL_19614926 | NSP3 | hCoV-19/Russia/SPE-RII-MH210352S/2024 | L | 151 | P | 600 | 20241031 |
| EPI_ISL_19641967 | NSP3 | hCoV-19/USA/CA-PFZ01071/2024 | L | 151 | V | 39 | 20240905 |
| EPI_ISL_9476308 | NSP3 | hCoV-19/Brazil/SP-IB_149951/2022 | L | 151 | A | 15 | 20220120 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Q | 152 | del | 28 | 20240315 |
| EPI_ISL_19589657 | NSP3 | hCoV-19/Israel/SMC-7118461/2024 | Q | 152 | H | 115 | 20241010 |
| EPI_ISL_19192496 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16084/2024 | Q | 152 | T | 4 | 20240411 |
| EPI_ISL_19225911 | NSP3 | hCoV-19/Italy/LOM_Unimi-3294/2024 | Q | 152 | P | 30 | 20240508 |
| EPI_ISL_17381572 | NSP3 | hCoV-19/England/PHEC-YYEXBQ7/2023 | Q | 152 | E | 17 | 20230317 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Q | 152 | D | 8 | 20230420 |
| EPI_ISL_19081489 | NSP3 | hCoV-19/Russia/MAG-RII-MH184350S/2024 | Q | 152 | K | 879 | 20240402 |
| EPI_ISL_19412215 | NSP3 | hCoV-19/Italy/LOM_IZSLER_273910_5/2024 | Q | 152 | L | 212 | 20240816 |
| EPI_ISL_18424155 | NSP3 | hCoV-19/USA/TX-HMH-134543/2023 | Q | 152 | N | 64 | 20230930 |
| EPI_ISL_2768153 | NSP3 | hCoV-19/Japan/PG-52692/2021 | Q | 152 | S | 2 | 20210517 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | Q | 152 | A | 1 | 20211019 |
| EPI_ISL_8915104 | NSP3 | hCoV-19/Canada/BC-BCCDC-317033/2021 | Q | 152 | Z | 1 | 20211227 |
| EPI_ISL_13779019 | NSP3 | hCoV-19/USA/FL-CDC-LC0743697/2022 | Q | 152 | insRKRL | 1 | 20220621 |
| EPI_ISL_12582762 | NSP3 | hCoV-19/Turkey/HSGM-G8497/2022 | Q | 152 | stop | 4 | 20220410 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | Q | 152 | Y | 1 | 20210727 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | Q | 152 | V | 1 | 20230419 |
| EPI_ISL_12050177 | NSP3 | hCoV-19/USA/FL-CDC-ASC210720240/2022 | Q | 152 | insKTHH | 1 | 20220326 |
| EPI_ISL_19797189 | NSP3 | hCoV-19/Ireland/CO-CUH-SC0014/2025 | Q | 152 | R | 541 | 20250213 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 152 | F | 1 | 20210318 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | P | 153 | K | 3 | 20230405 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | P | 153 | G | 1 | 20211019 |
| EPI_ISL_15527444 | NSP3 | hCoV-19/Chile/LI-120693/2022 | P | 153 | D | 2 | 20221017 |
| EPI_ISL_19269377 | NSP3 | hCoV-19/USA/CO-CDPHE-42011975/2024 | P | 153 | A | 30 | 20240627 |
| EPI_ISL_6649814 | NSP3 | hCoV-19/Puerto Rico/PR-UPRRP-4371/2021 | P | 153 | Y | 1 | 20210812 |
| EPI_ISL_19825984 | NSP3 | hCoV-19/Singapore/Y25R15MSC80/2025 | P | 153 | L | 39135 | 20250408 |
| EPI_ISL_19762894 | NSP3 | hCoV-19/Egypt/CPHL-EGY24442/2024 | P | 153 | R | 36 | 20241219 |
| EPI_ISL_17241637 | NSP3 | hCoV-19/Israel/ICH-741196588/2023 | P | 153 | insHHE | 2 | 20230310 |
| EPI_ISL_18510289 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA9617-P0/2023 | P | 153 | N | 8 | 20231030 |
| EPI_ISL_14880089 | NSP3 | hCoV-19/Japan/PG-342353/2022 | P | 153 | insRKRN | 6 | 20220608 |
| EPI_ISL_16113350 | NSP3 | hCoV-19/USA/TX-HMH-M-119286/2022 | P | 153 | Q | 19 | 20221201 |
| EPI_ISL_19192496 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16084/2024 | P | 153 | stop | 1 | 20240411 |
| EPI_ISL_19231961 | NSP3 | hCoV-19/Russia/PER-RII-MH191102S/2024 | P | 153 | F | 42 | 20240404 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | P | 153 | del | 30 | 20240315 |
| EPI_ISL_17766977 | NSP3 | hCoV-19/Morocco/INH-261305/2021 | P | 153 | M | 1 | 20210115 |
| EPI_ISL_19795892 | NSP3 | hCoV-19/Australia/WA16847/2025 | P | 153 | T | 253 | 20250305 |
| EPI_ISL_18936247 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00138/2023 | P | 153 | V | 8 | 20230419 |
| EPI_ISL_19810414 | NSP3 | hCoV-19/Singapore/Y25R13MSC39/2025 | P | 153 | H | 569 | 20250324 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | P | 153 | E | 2 | 20230420 |
| EPI_ISL_19829147 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136508/2025 | P | 153 | S | 11572 | 20250402 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | E | 154 | M | 1 | 20230405 |
| EPI_ISL_8934221 | NSP3 | hCoV-19/USA/CA-CDC-FG-234999/2022 | E | 154 | insDNL | 1 | 20220104 |
| EPI_ISL_19646623 | NSP3 | hCoV-19/Singapore/Y25R1MSC45/2024 | E | 154 | D | 549 | 20241227 |
| EPI_ISL_10011374 | NSP3 | hCoV-19/DRC/ILRI_COVM02238/2021 | E | 154 | insDAG | 1 | 20210628 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | E | 154 | Y | 1 | 20210727 |
| EPI_ISL_19459317 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16229/2024 | E | 154 | del | 30 | 20240619 |
| EPI_ISL_19816718 | NSP3 | hCoV-19/Australia/WA16882/2025 | E | 154 | V | 62 | 20250321 |
| EPI_ISL_18631444 | NSP3 | hCoV-19/Germany/BY-LGL-6083374/2023 | E | 154 | Z | 8 | 20231120 |
| EPI_ISL_18881922 | NSP3 | hCoV-19/England/CLIMB-CM7YKWAY/2024 | E | 154 | insGGS | 1 | 20240124 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | E | 154 | N | 7 | 20220703 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | E | 154 | F | 1 | 20211019 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | E | 154 | R | 8 | 20220118 |
| EPI_ISL_15737894 | NSP3 | hCoV-19/Germany/BW-RKI-I-1022358/2022 | E | 154 | insSG | 4 | 20221028 |
| EPI_ISL_5352049 | NSP3 | hCoV-19/Japan/20210502-23626/2021 | E | 154 | S | 2 | 20210502 |
| EPI_ISL_18931382 | NSP3 | hCoV-19/USA/CA-GBW-H10-020-2950/2024 | E | 154 | insATR | 1 | 20240214 |
| EPI_ISL_1738038 | NSP3 | hCoV-19/USA/PA-CDC-QDX23760591/2021 | E | 154 | insNPHLE | 61 | 20210407 |
| EPI_ISL_9476308 | NSP3 | hCoV-19/Brazil/SP-IB_149951/2022 | E | 154 | P | 15 | 20220120 |
| EPI_ISL_19802699 | NSP3 | hCoV-19/South Korea/KDCA297143/2025 | E | 154 | G | 263 | 20250304 |
| EPI_ISL_19819790 | NSP3 | hCoV-19/Wales/CLIMB-CM7YR3EY/2025 | E | 154 | K | 1414 | 20250324 |
| EPI_ISL_13112198 | NSP3 | hCoV-19/Israel/SMC-7069234/2022 | E | 154 | insRIR | 3 | 20220509 |
| EPI_ISL_19376125 | NSP3 | hCoV-19/USA/GA-GPHL-0726/2024 | E | 154 | Q | 238 | 20240717 |
| EPI_ISL_15005651 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1112/2021 | E | 154 | H | 1 | 20211009 |
| EPI_ISL_19680097 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09614/2024 | E | 154 | insQFQ | 1 | 20241208 |
| EPI_ISL_8988647 | NSP3 | hCoV-19/USA/AZ-ASU35476/2022 | E | 154 | insNRG | 1 | 20220106 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 154 | T | 1 | 20220210 |
| EPI_ISL_18914970 | NSP3 | hCoV-19/env/Ukraine/80861/2023 | E | 154 | stop | 11 | 20231009 |
| EPI_ISL_19702088 | NSP3 | hCoV-19/Canada/ON-PHL-202502544/2025 | E | 154 | A | 387 | 20250119 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | E | 154 | L | 3 | 20240101 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | E | 154 | insXFDKNLY | 1 | 20211122 |
| EPI_ISL_13914861 | NSP3 | hCoV-19/USA/SC-CDC-LC0768057/2022 | E | 155 | insAEGE | 4 | 20220703 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | E | 155 | S | 3 | 20240101 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | E | 155 | I | 1 | 20230405 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 155 | T | 1 | 20220210 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | E | 155 | L | 10 | 20230217 |
| EPI_ISL_17592075 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3051/2023 | E | 155 | R | 12 | 20230406 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | E | 155 | insstop | 1 | 20210801 |
| EPI_ISL_19620563 | NSP3 | hCoV-19/Canada/ON-PHL-202424229/2024 | E | 155 | A | 103 | 20241206 |
| EPI_ISL_17766977 | NSP3 | hCoV-19/Morocco/INH-261305/2021 | E | 155 | M | 1 | 20210115 |
| EPI_ISL_19832215 | NSP3 | hCoV-19/USA/MI-UM-10062810647/2025 | E | 155 | K | 1433 | 20250310 |
| EPI_ISL_15763448 | NSP3 | hCoV-19/Spain/GA-SCQ_22-307282/2022 | E | 155 | stop | 10 | 20221004 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | E | 155 | del | 28 | 20230928 |
| EPI_ISL_19506818 | NSP3 | hCoV-19/USA/NY-Wadsworth-24063853-01/2024 | E | 155 | V | 58 | 20241010 |
| EPI_ISL_14180124 | NSP3 | hCoV-19/USA/TX-HMH-M-108760/2022 | E | 155 | N | 1 | 20220723 |
| EPI_ISL_19819492 | NSP3 | hCoV-19/Taiwan/CDC-W42120/2025 | E | 155 | D | 388 | 20250331 |
| EPI_ISL_19832664 | NSP3 | hCoV-19/Canada/BC-BCCDC-771190/2025 | E | 155 | G | 564 | 20250307 |
| EPI_ISL_9313728 | NSP3 | hCoV-19/England/NEWC-33E0C42/2022 | E | 155 | Z | 2 | 20220123 |
| EPI_ISL_18103730 | NSP3 | hCoV-19/Malaysia/TIDREC-NSC2732/2023 | E | 155 | Q | 15 | 20230505 |
| EPI_ISL_15900656 | NSP3 | hCoV-19/Germany/SN-RKI-I-1029231/2022 | E | 156 | insE | 18 | 20220809 |
| EPI_ISL_19823310 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4203007/2025 | E | 156 | V | 47 | 20250318 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | E | 156 | L | 2 | 20211019 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | E | 156 | T | 2 | 20230405 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | E | 156 | insLVRstopstopstop | 5 | 20220118 |
| EPI_ISL_10951210 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-10085/2022 | E | 156 | N | 8 | 20220214 |
| EPI_ISL_17592075 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3051/2023 | E | 156 | R | 10 | 20230406 |
| EPI_ISL_18821326 | NSP3 | hCoV-19/Malaysia/UNIMAS-TMCGP3709/2024 | E | 156 | stop | 7 | 20240105 |
| EPI_ISL_19824781 | NSP3 | hCoV-19/France/ARA-HCL025053030601/2025 | E | 156 | K | 561 | 20250329 |
| EPI_ISL_19645858 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015378/2024 | E | 156 | A | 579 | 20241025 |
| EPI_ISL_19829402 | NSP3 | hCoV-19/USA/LA-CDC-2-8366102/2025 | E | 156 | G | 355 | 20250212 |
| EPI_ISL_8530894 | NSP3 | hCoV-19/England/BRBR-30FE28E/2022 | E | 156 | Z | 3 | 20220102 |
| EPI_ISL_19186331 | NSP3 | hCoV-19/env/Germany/BY-LGL-6247688/2024 | E | 156 | S | 28 | 20240506 |
| EPI_ISL_19660776 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-29L-MM00042R/2024 | E | 156 | del | 104 | 20241229 |
| EPI_ISL_19758508 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10476/2025 | E | 156 | D | 1256 | 20250207 |
| EPI_ISL_18575334 | NSP3 | hCoV-19/USA/NY-SUNYQB-X7346/2023 | E | 156 | Q | 33 | 20231121 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | E | 156 | F | 2 | 20240101 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | Q | 157 | A | 4 | 20240118 |
| EPI_ISL_15527444 | NSP3 | hCoV-19/Chile/LI-120693/2022 | Q | 157 | insTVG | 1 | 20221017 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | Q | 157 | del | 87 | 20230928 |
| EPI_ISL_18373807 | NSP3 | hCoV-19/Slovenia/18461/2023 | Q | 157 | P | 35 | 20231001 |
| EPI_ISL_19588296 | NSP3 | hCoV-19/Denmark/DCGC-690896/2024 | Q | 157 | R | 374 | 20241118 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | Q | 157 | S | 12 | 20220118 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | Q | 157 | C | 6 | 20230217 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Q | 157 | N | 1 | 20230104 |
| EPI_ISL_19186331 | NSP3 | hCoV-19/env/Germany/BY-LGL-6247688/2024 | Q | 157 | K | 91 | 20240506 |
| EPI_ISL_16407941 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1109/2022 | Q | 157 | stop | 6 | 20221219 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | Q | 157 | insIGstopMMIV | 1 | 20201004 |
| EPI_ISL_19555155 | NSP3 | hCoV-19/Ukraine/89058/2024 | Q | 157 | H | 105 | 20241007 |
| EPI_ISL_19785516 | NSP3 | hCoV-19/Japan/FR302-0232/2025 | Q | 157 | L | 175 | 20250218 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Q | 157 | E | 13 | 20240315 |
| EPI_ISL_1016506 | NSP3 | hCoV-19/Puerto Rico/PR-BXU2/2021 | Q | 157 | Z | 1 | 20210101 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | Q | 157 | insV | 1 | 20210804 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | Q | 157 | M | 4 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 157 | W | 1 | 20210318 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | Q | 157 | T | 2 | 20240101 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | Q | 157 | D | 1 | 20230419 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | E | 158 | P | 1 | 20210727 |
| EPI_ISL_19312284 | NSP3 | hCoV-19/Wales/CLIMB-CM7YJSZB/2024 | E | 158 | D | 888 | 20240722 |
| EPI_ISL_17016504 | NSP3 | hCoV-19/England/BRBR-326D7856/2023 | E | 158 | Z | 5 | 20230218 |
| EPI_ISL_19266772 | NSP3 | hCoV-19/USA/UT-UPHL-240715931948/2024 | E | 158 | K | 135 | 20240703 |
| EPI_ISL_17592075 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3051/2023 | E | 158 | R | 3 | 20230406 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | E | 158 | T | 7 | 20240118 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 158 | L | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 158 | I | 1 | 20210318 |
| EPI_ISL_15527444 | NSP3 | hCoV-19/Chile/LI-120693/2022 | E | 158 | Q | 6 | 20221017 |
| EPI_ISL_18936262 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00176/2023 | E | 158 | V | 12 | 20230424 |
| EPI_ISL_8049918 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7089/2021 | E | 158 | insXXQSD | 1 | 20211129 |
| EPI_ISL_19459314 | NSP3 | hCoV-19/India/MH-ICMR-NIV-243691/2024 | E | 158 | del | 90 | 20240826 |
| EPI_ISL_18597036 | NSP3 | hCoV-19/South Korea/KDCA275440/2023 | E | 158 | G | 81 | 20231107 |
| EPI_ISL_18941874 | NSP3 | hCoV-19/USA/HI-TAMC_3309/2024 | E | 158 | A | 38 | 20240124 |
| EPI_ISL_14245205 | NSP3 | hCoV-19/USA/UT-UPHL-220730813688/2022 | E | 158 | stop | 12 | 20220711 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | E | 158 | S | 8 | 20230217 |
| EPI_ISL_10944006 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8905/2022 | E | 158 | N | 3 | 20220208 |
| EPI_ISL_17259345 | NSP3 | hCoV-19/USA/PA-CDC-LC1027033/2023 | E | 159 | Q | 6 | 20230306 |
| EPI_ISL_13281831 | NSP3 | hCoV-19/Kazakhstan/ALA-NRL-S1569/2022 | E | 159 | stop | 5 | 20220414 |
| EPI_ISL_19384495 | NSP3 | hCoV-19/Hubei/HCDC-EZ6850/2024 | E | 159 | G | 189 | 20240806 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 159 | T | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 159 | L | 1 | 20210318 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | E | 159 | S | 1 | 20211122 |
| EPI_ISL_19186331 | NSP3 | hCoV-19/env/Germany/BY-LGL-6247688/2024 | E | 159 | K | 716 | 20240506 |
| EPI_ISL_19825358 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-04D-MM00063R/2025 | E | 159 | D | 1021 | 20250404 |
| EPI_ISL_18529771 | NSP3 | hCoV-19/Peru/CAL-INS-46953/2023 | E | 159 | V | 22 | 20231013 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 159 | C | 1 | 20220210 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | E | 159 | insIGstop | 1 | 20210114 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | E | 159 | N | 7 | 20240118 |
| EPI_ISL_19821811 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136081/2025 | E | 159 | insE | 38 | 20250325 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 159 | P | 1 | 20230420 |
| EPI_ISL_19518198 | NSP3 | hCoV-19/Finland/THL-06723/2024 | E | 159 | A | 143 | 20240923 |
| EPI_ISL_19408583 | NSP3 | hCoV-19/Ireland/SO-NVRL-GIRL00064199/2024 | E | 159 | del | 117 | 20240829 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | E | 159 | F | 1 | 20210622 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | E | 159 | Z | 1 | 20230217 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | E | 159 | Y | 1 | 20230217 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | E | 159 | insG | 3 | 20221119 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | E | 159 | R | 6 | 20240101 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | D | 160 | T | 2 | 20220811 |
| EPI_ISL_19351274 | NSP3 | hCoV-19/Netherlands/OV-RIVM-140703/2024 | D | 160 | Y | 115 | 20240723 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | D | 160 | P | 1 | 20240101 |
| EPI_ISL_18397304 | NSP3 | hCoV-19/Singapore/R74MR121/2023 | D | 160 | B | 7 | 20231010 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | D | 160 | stop | 2 | 20210622 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | D | 160 | M | 1 | 20210114 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | D | 160 | del | 102 | 20230928 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | D | 160 | S | 2 | 20230217 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | D | 160 | Q | 4 | 20230420 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | D | 160 | C | 10 | 20240118 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | D | 160 | H | 4 | 20230104 |
| EPI_ISL_12291391 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1125/2022 | D | 160 | F | 2 | 20220123 |
| EPI_ISL_18184008 | NSP3 | hCoV-19/Japan/JU-65484/2022 | D | 160 | K | 4 | 20220622 |
| EPI_ISL_19544108 | NSP3 | hCoV-19/Canada/BC-BCCDC-747732/2024 | D | 160 | G | 150 | 20241028 |
| EPI_ISL_18918575 | NSP3 | hCoV-19/Poland/Kce-256/2024 | D | 160 | N | 150 | 20240201 |
| EPI_ISL_19550910 | NSP3 | hCoV-19/Japan/FR055-0309/2024 | D | 160 | A | 16 | 20241103 |
| EPI_ISL_18936262 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00176/2023 | D | 160 | R | 3 | 20230424 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | D | 160 | insCRstopstopSTNC | 1 | 20210812 |
| EPI_ISL_15292737 | NSP3 | hCoV-19/India/GA-NCCS-3055200222104/2021 | D | 160 | I | 3 | 20211216 |
| EPI_ISL_19325791 | NSP3 | hCoV-19/Uganda/UVRI_ARU2345/2024 | D | 160 | E | 47 | 20240404 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | D | 160 | L | 4 | 20230419 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | D | 160 | V | 7 | 20220819 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | W | 161 | Q | 2 | 20240101 |
| EPI_ISL_12934197 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010422-1490/2022 | W | 161 | M | 2 | 20220104 |
| EPI_ISL_19425903 | NSP3 | hCoV-19/USA/TX-HMH-M-145202/2024 | W | 161 | R | 60 | 20240816 |
| EPI_ISL_11793451 | NSP3 | hCoV-19/India/KA-SEQ_14221_S82_R1_001/2022 | W | 161 | S | 2 | 20220215 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | W | 161 | K | 3 | 20220210 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | W | 161 | insNLVPLLLL | 1 | 20230405 |
| EPI_ISL_15527444 | NSP3 | hCoV-19/Chile/LI-120693/2022 | W | 161 | G | 5 | 20221017 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | W | 161 | C | 53 | 20240315 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | W | 161 | Y | 3 | 20230217 |
| EPI_ISL_18255148 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-08/2023 | W | 161 | I | 2 | 20230316 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | W | 161 | E | 5 | 20230217 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | W | 161 | del | 104 | 20230928 |
| EPI_ISL_11370187 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-45/2022 | W | 161 | F | 3 | 20220220 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | W | 161 | T | 3 | 20230403 |
| EPI_ISL_18112511 | NSP3 | hCoV-19/France/IDF-IPP16808/2023 | W | 161 | L | 39 | 20230731 |
| EPI_ISL_19014042 | NSP3 | hCoV-19/Japan/7517659_S41/2024 | W | 161 | stop | 39 | 20240118 |
| EPI_ISL_19599143 | NSP3 | hCoV-19/USA/CA-CDPH-500144354/2024 | L | 162 | S | 26 | 20241010 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | L | 162 | del | 116 | 20240118 |
| EPI_ISL_18936247 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00138/2023 | L | 162 | H | 1 | 20230419 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | L | 162 | I | 7 | 20230217 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | L | 162 | E | 5 | 20240315 |
| EPI_ISL_10826770 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-87474/2022 | L | 162 | M | 2 | 20220129 |
| EPI_ISL_14773214 | NSP3 | hCoV-19/Finland/THL-202218109/2022 | L | 162 | stop | 17 | 20220811 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | L | 162 | J | 1 | 20230217 |
| EPI_ISL_18442448 | NSP3 | hCoV-19/USA/NY-URMC-N7S1K365-1/2023 | L | 162 | F | 44 | 20230929 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | L | 162 | R | 2 | 20210909 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | L | 162 | C | 8 | 20220811 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | L | 162 | N | 2 | 20210701 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | L | 162 | V | 15 | 20240101 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | L | 162 | D | 1 | 20230419 |
| EPI_ISL_10598428 | NSP3 | hCoV-19/USA/CA-CDC-ASC210821919/2022 | L | 162 | insVGGA | 1 | 20220217 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | L | 162 | A | 1 | 20230420 |
| EPI_ISL_8049918 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7089/2021 | L | 162 | W | 1 | 20211129 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 162 | P | 1 | 20230217 |
| EPI_ISL_18255148 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-08/2023 | L | 162 | T | 1 | 20230316 |
| EPI_ISL_18936415 | NSP3 | hCoV-19/England/CLIMB-CM7YFU1A/2024 | D | 163 | B | 10 | 20240216 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | D | 163 | S | 3 | 20220811 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | D | 163 | P | 1 | 20210909 |
| EPI_ISL_19630975 | NSP3 | hCoV-19/Australia/TAS008626/2024 | D | 163 | G | 1702 | 20241122 |
| EPI_ISL_18936262 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00176/2023 | D | 163 | R | 4 | 20230424 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | D | 163 | M | 2 | 20210813 |
| EPI_ISL_18228273 | NSP3 | hCoV-19/Spain/PV-HUD-70046725/2023 | D | 163 | V | 25 | 20230830 |
| EPI_ISL_15292737 | NSP3 | hCoV-19/India/GA-NCCS-3055200222104/2021 | D | 163 | stop | 1 | 20211216 |
| EPI_ISL_19464548 | NSP3 | hCoV-19/Hong Kong/VB24302571/2024 | D | 163 | A | 173 | 20240924 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | D | 163 | K | 3 | 20220703 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | D | 163 | del | 122 | 20240118 |
| EPI_ISL_18255148 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-08/2023 | D | 163 | L | 3 | 20230316 |
| EPI_ISL_16741178 | NSP3 | hCoV-19/India/TN-CORES_24780/2022 | D | 163 | C | 3 | 20220103 |
| EPI_ISL_19785717 | NSP3 | hCoV-19/USA/NY-Wadsworth-25020771-01/2025 | D | 163 | Y | 2334 | 20250226 |
| EPI_ISL_19393256 | NSP3 | hCoV-19/Spain/CT-LabRefCat-4195748/2024 | D | 163 | H | 17 | 20240806 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | D | 163 | insstop | 1 | 20200729 |
| EPI_ISL_19611044 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000634501/2024 | D | 163 | N | 208 | 20241122 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 163 | insstopstopstop | 2 | 20230101 |
| EPI_ISL_19080143 | NSP3 | hCoV-19/South Korea/KDCA291717/2024 | D | 163 | E | 463 | 20240401 |
| EPI_ISL_18255148 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-08/2023 | D | 164 | F | 8 | 20230316 |
| EPI_ISL_17275343 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45869/2023 | D | 164 | J | 1 | 20230217 |
| EPI_ISL_9682875 | NSP3 | hCoV-19/India/MH-RFIP06240/2021 | D | 164 | insCYVCISCX | 1 | 20211104 |
| EPI_ISL_17372599 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2616/2023 | D | 164 | K | 7 | 20230113 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | D | 164 | insITQIIT | 1 | 20240101 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | D | 164 | L | 3 | 20230405 |
| EPI_ISL_19688038 | NSP3 | hCoV-19/USA/UT-UPHL-250117896958/2025 | D | 164 | insFT | 1 | 20250109 |
| EPI_ISL_19762894 | NSP3 | hCoV-19/Egypt/CPHL-EGY24442/2024 | D | 164 | E | 134 | 20241219 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | D | 164 | P | 6 | 20230217 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | D | 164 | M | 5 | 20211122 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | D | 164 | S | 7 | 20230420 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | D | 164 | W | 1 | 20210701 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | D | 164 | Q | 2 | 20230429 |
| EPI_ISL_19459921 | NSP3 | hCoV-19/Kosovo/1948_08/2024 | D | 164 | N | 239 | 20240731 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | D | 164 | T | 2 | 20230217 |
| EPI_ISL_15292737 | NSP3 | hCoV-19/India/GA-NCCS-3055200222104/2021 | D | 164 | stop | 3 | 20211216 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | D | 164 | del | 137 | 20240118 |
| EPI_ISL_19615488 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09192/2024 | D | 164 | Y | 108 | 20241127 |
| EPI_ISL_19786409 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56668/2025 | D | 164 | G | 1863 | 20250217 |
| EPI_ISL_19521491 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-21J-MM00148S/2024 | D | 164 | A | 211 | 20241021 |
| EPI_ISL_18826473 | NSP3 | hCoV-19/USA/AR-CDC-QDX91017809/2024 | D | 164 | H | 3 | 20240104 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | D | 164 | V | 47 | 20240101 |
| EPI_ISL_19232418 | NSP3 | hCoV-19/England/CLIMB-CM7YG4KR/2024 | D | 164 | B | 18 | 20240616 |
| EPI_ISL_19760504 | NSP3 | hCoV-19/USA/NJ-CDC-LC1133383/2025 | D | 165 | N | 281 | 20250222 |
| EPI_ISL_15292737 | NSP3 | hCoV-19/India/GA-NCCS-3055200222104/2021 | D | 165 | stop | 3 | 20211216 |
| EPI_ISL_19659095 | NSP3 | hCoV-19/Japan/FR027-0179/2024 | D | 165 | del | 183 | 20241214 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | D | 165 | T | 8 | 20240101 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | D | 165 | E | 29 | 20240315 |
| EPI_ISL_9973561 | NSP3 | hCoV-19/France/BFC-HMN-22012270436/2022 | D | 165 | L | 4 | 20220124 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | D | 165 | S | 18 | 20240118 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | D | 165 | V | 15 | 20230403 |
| EPI_ISL_18060037 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-018817/2023 | D | 165 | insD | 44 | 20230706 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | D | 165 | K | 8 | 20230405 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | D | 165 | R | 1 | 20210909 |
| EPI_ISL_19545538 | NSP3 | hCoV-19/Sichuan/DZCDC-CX0277/2024 | D | 165 | Y | 126 | 20240912 |
| EPI_ISL_19819922 | NSP3 | hCoV-19/Canada/ON-HRL-20251019405442-v1/2025 | D | 165 | G | 2267 | 20250313 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | D | 165 | insLLV | 1 | 20210114 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | D | 165 | Q | 1 | 20230419 |
| EPI_ISL_10951210 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-10085/2022 | D | 165 | C | 7 | 20220214 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | D | 165 | M | 1 | 20200729 |
| EPI_ISL_16407939 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1104/2022 | D | 165 | I | 4 | 20221214 |
| EPI_ISL_17347918 | NSP3 | hCoV-19/Puerto Rico/RCMI-1180743/2022 | D | 165 | B | 9 | 20221221 |
| EPI_ISL_18689954 | NSP3 | hCoV-19/USA/TX-HMH-M-136109/2023 | D | 165 | H | 6 | 20231206 |
| EPI_ISL_18714902 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC44801/2023 | D | 165 | A | 172 | 20231214 |
| EPI_ISL_19659095 | NSP3 | hCoV-19/Japan/FR027-0179/2024 | S | 166 | del | 131 | 20241214 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | S | 166 | stop | 1 | 20210809 |
| EPI_ISL_16741178 | NSP3 | hCoV-19/India/TN-CORES_24780/2022 | S | 166 | L | 3 | 20220103 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | S | 166 | D | 10 | 20230928 |
| EPI_ISL_14329141 | NSP3 | hCoV-19/France/CVL-HMN-22072220723/2022 | S | 166 | insGYL | 1 | 20220718 |
| EPI_ISL_19531847 | NSP3 | hCoV-19/USA/CA-NSYMMPHL-NSYM9346/2024 | S | 166 | N | 1764 | 20241022 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | S | 166 | E | 2 | 20230419 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | S | 166 | F | 5 | 20240315 |
| EPI_ISL_19646223 | NSP3 | hCoV-19/Israel/ICH-741227179/2024 | S | 166 | C | 99 | 20241222 |
| EPI_ISL_19527172 | NSP3 | hCoV-19/USA/MI-UM-G88A60G7/2024 | S | 166 | G | 884 | 20240918 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | S | 166 | T | 22 | 20240118 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | S | 166 | Q | 2 | 20240101 |
| EPI_ISL_19760787 | NSP3 | hCoV-19/USA/NM-NMDOH-2025002280/2025 | S | 166 | R | 93 | 20250103 |
| EPI_ISL_19690952 | NSP3 | hCoV-19/Italy/LOM_ASSTCREMONA_CRV-7004888/2025 | S | 166 | I | 1032 | 20250108 |
| EPI_ISL_12702541 | NSP3 | hCoV-19/Luxembourg/LNS3892036/2022 | S | 166 | V | 4 | 20220419 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | S | 166 | K | 7 | 20230405 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | S | 166 | A | 7 | 20230420 |
| EPI_ISL_18166730 | NSP3 | hCoV-19/Jordan/MOH-CPHL-08/2023 | Q | 167 | insC | 1 | 20230731 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | Q | 167 | A | 2 | 20230403 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | Q | 167 | Y | 3 | 20230928 |
| EPI_ISL_18522976 | NSP3 | hCoV-19/USA/NJ-PHEL-V23017482/2023 | Q | 167 | H | 69 | 20231020 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | Q | 167 | N | 9 | 20240101 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Q | 167 | E | 30 | 20240315 |
| EPI_ISL_10944436 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0402/2021 | Q | 167 | insY | 1 | 20211215 |
| EPI_ISL_9917638 | NSP3 | hCoV-19/Canada/ON-PHL-22-07007-v2/2022 | Q | 167 | I | 1 | 20220113 |
| EPI_ISL_17372599 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2616/2023 | Q | 167 | V | 6 | 20230113 |
| EPI_ISL_2603416 | NSP3 | hCoV-19/France/ARA-CHUGA-1065843103/2021 | Q | 167 | M | 1 | 20210608 |
| EPI_ISL_8049918 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7089/2021 | Q | 167 | insXXXQEEEPQLAASXXXXX | 1 | 20211129 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Q | 167 | G | 1 | 20230420 |
| EPI_ISL_19659095 | NSP3 | hCoV-19/Japan/FR027-0179/2024 | Q | 167 | del | 131 | 20241214 |
| EPI_ISL_19699462 | NSP3 | hCoV-19/USA/CA-PFZ03309/2024 | Q | 167 | L | 439 | 20241230 |
| EPI_ISL_19503679 | NSP3 | hCoV-19/Russia/MO-RII-MH201380S/2024 | Q | 167 | R | 761 | 20240912 |
| EPI_ISL_12440245 | NSP3 | hCoV-19/Germany/BY-LGL-IMS-10272-CVDP-0b6af0b7-15cb-41e2-8ee4-7d944ef4d2df/2022 | Q | 167 | Z | 3 | 20220412 |
| EPI_ISL_18255100 | NSP3 | hCoV-19/Pakistan/PACP-B13-S02/2023 | Q | 167 | S | 10 | 20230321 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Q | 167 | C | 4 | 20230101 |
| EPI_ISL_18735122 | NSP3 | hCoV-19/Poland/WSSERZ-SNR23/2023 | Q | 167 | P | 27 | 20231205 |
| EPI_ISL_15527444 | NSP3 | hCoV-19/Chile/LI-120693/2022 | Q | 167 | T | 3 | 20221017 |
| EPI_ISL_19768597 | NSP3 | hCoV-19/Australia/WA16796/2025 | Q | 167 | K | 1701 | 20250210 |
| EPI_ISL_13891668 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-105253/2022 | Q | 167 | stop | 10 | 20220706 |
| EPI_ISL_19658557 | NSP3 | hCoV-19/USA/FL-CDC-LC1127170/2024 | Q | 168 | R | 282 | 20241227 |
| EPI_ISL_11764409 | NSP3 | hCoV-19/USA/AZ-ASU57823/2022 | Q | 168 | stop | 5 | 20220214 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Q | 168 | P | 11 | 20240315 |
| EPI_ISL_18166730 | NSP3 | hCoV-19/Jordan/MOH-CPHL-08/2023 | Q | 168 | W | 4 | 20230731 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Q | 168 | F | 1 | 20230420 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | Q | 168 | D | 1 | 20240101 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | Q | 168 | A | 1 | 20230403 |
| EPI_ISL_19419507 | NSP3 | hCoV-19/USA/PA-CDC-LC1119869/2024 | Q | 168 | Z | 2 | 20240827 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | Q | 168 | S | 9 | 20220811 |
| EPI_ISL_19107627 | NSP3 | hCoV-19/USA/GA-EHC-7826N/2024 | Q | 168 | H | 32 | 20240116 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | Q | 168 | Y | 7 | 20230217 |
| EPI_ISL_15292737 | NSP3 | hCoV-19/India/GA-NCCS-3055200222104/2021 | Q | 168 | N | 5 | 20211216 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | Q | 168 | insCW | 2 | 20211215 |
| EPI_ISL_19659095 | NSP3 | hCoV-19/Japan/FR027-0179/2024 | Q | 168 | del | 215 | 20241214 |
| EPI_ISL_5384980 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-65207/2021 | Q | 168 | insICW | 1 | 20210927 |
| EPI_ISL_17700640 | NSP3 | hCoV-19/Canada/ON-KHS-04171-v1/2023 | Q | 168 | L | 74 | 20230511 |
| EPI_ISL_15527444 | NSP3 | hCoV-19/Chile/LI-120693/2022 | Q | 168 | T | 3 | 20221017 |
| EPI_ISL_10943764 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8063/2022 | Q | 168 | M | 2 | 20220203 |
| EPI_ISL_9624465 | NSP3 | hCoV-19/USA/OH-CDC-QDX32932948/2022 | Q | 168 | insVQN | 1 | 20220110 |
| EPI_ISL_14178972 | NSP3 | hCoV-19/USA/TX-HMH-M-107662/2022 | Q | 168 | insNCW | 16 | 20220718 |
| EPI_ISL_19636312 | NSP3 | hCoV-19/USA/FL-GBW-GKISBBBD55671/2024 | Q | 168 | K | 1071 | 20241219 |
| EPI_ISL_19379524 | NSP3 | hCoV-19/USA/PA-CDC-LC1117431/2024 | Q | 168 | E | 56 | 20240820 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 169 | R | 1 | 20220210 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | T | 169 | E | 8 | 20240101 |
| EPI_ISL_19691385 | NSP3 | hCoV-19/Canada/ON-PHL-202501659/2025 | T | 169 | I | 2225 | 20250113 |
| EPI_ISL_19081790 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRK9W/2024 | T | 169 | P | 26 | 20240404 |
| EPI_ISL_19785501 | NSP3 | hCoV-19/Japan/FR302-0250/2025 | T | 169 | A | 232 | 20250301 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | T | 169 | S | 80 | 20240315 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 169 | D | 1 | 20210424 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | T | 169 | G | 3 | 20230928 |
| EPI_ISL_17702246 | NSP3 | hCoV-19/USA/OR-OHSU-222580287/2022 | T | 169 | Y | 28 | 20220803 |
| EPI_ISL_19756621 | NSP3 | hCoV-19/Liaoning/LNCDC-037-4/2025 | T | 169 | N | 473 | 20250215 |
| EPI_ISL_19659095 | NSP3 | hCoV-19/Japan/FR027-0179/2024 | T | 169 | del | 217 | 20241214 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | T | 169 | Q | 12 | 20240118 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | T | 169 | V | 3 | 20221118 |
| EPI_ISL_16407939 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1104/2022 | T | 169 | L | 5 | 20221214 |
| EPI_ISL_17715547 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-18/2023 | T | 169 | K | 49 | 20230429 |
| EPI_ISL_19050307 | NSP3 | hCoV-19/Japan/FR050-0009/2024 | V | 170 | G | 66 | 20240308 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | V | 170 | P | 1 | 20200608 |
| EPI_ISL_19334598 | NSP3 | hCoV-19/Egypt/CPHL-EGY24137/2024 | V | 170 | D | 18 | 20240624 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | V | 170 | K | 4 | 20230928 |
| EPI_ISL_19513274 | NSP3 | hCoV-19/Sweden/O-24-DH-6895/2024 | V | 170 | A | 360 | 20241013 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | V | 170 | M | 1 | 20220811 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | V | 170 | L | 7 | 20230420 |
| EPI_ISL_16572286 | NSP3 | hCoV-19/USA/CA-CDC-QDX44939805/2022 | V | 170 | insVYR | 1 | 20221223 |
| EPI_ISL_19233649 | NSP3 | hCoV-19/USA/TX-PHH-CS-03942/2024 | V | 170 | F | 1254 | 20240603 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | V | 170 | T | 31 | 20240315 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | V | 170 | Q | 2 | 20230419 |
| EPI_ISL_14915275 | NSP3 | hCoV-19/Poland/Kce-4705/2022 | V | 170 | C | 5 | 20220823 |
| EPI_ISL_18831506 | NSP3 | hCoV-19/Pakistan/DUHS-18/2024 | V | 170 | stop | 18 | 20240118 |
| EPI_ISL_10944436 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0402/2021 | V | 170 | H | 1 | 20211215 |
| EPI_ISL_8049919 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7131/2021 | V | 170 | E | 1 | 20211201 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | V | 170 | S | 2 | 20240101 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | V | 170 | Y | 7 | 20240320 |
| EPI_ISL_7591215 | NSP3 | hCoV-19/Russia/SPE-RII-2580S/2021 | V | 170 | N | 2 | 20211105 |
| EPI_ISL_19674195 | NSP3 | hCoV-19/Australia/QLD0x015013/2024 | V | 170 | del | 228 | 20241225 |
| EPI_ISL_19772284 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10661/2025 | V | 170 | I | 1180 | 20250204 |
| EPI_ISL_10943764 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8063/2022 | G | 171 | insKL | 1 | 20220203 |
| EPI_ISL_18225040 | NSP3 | hCoV-19/USA/HI-H2324084/2023 | G | 171 | A | 34 | 20230816 |
| EPI_ISL_19747027 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015785/2025 | G | 171 | V | 5597 | 20250129 |
| EPI_ISL_19692699 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09702/2025 | G | 171 | D | 2423 | 20250110 |
| EPI_ISL_18139468 | NSP3 | hCoV-19/Egypt/CPHL-EGY23977/2022 | G | 171 | stop | 1 | 20220815 |
| EPI_ISL_16407939 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1104/2022 | G | 171 | K | 9 | 20221214 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | G | 171 | T | 1 | 20230217 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | G | 171 | L | 2 | 20230419 |
| EPI_ISL_19668382 | NSP3 | hCoV-19/USA/CT-DPH-1269167001/2024 | G | 171 | S | 1104 | 20241228 |
| EPI_ISL_19819974 | NSP3 | hCoV-19/Canada/ON-KHS-202500836-v1/2025 | G | 171 | C | 452 | 20250325 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | G | 171 | W | 1 | 20210809 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 171 | E | 2 | 20220210 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | G | 171 | insL | 1 | 20200721 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | G | 171 | Q | 4 | 20240315 |
| EPI_ISL_19674195 | NSP3 | hCoV-19/Australia/QLD0x015013/2024 | G | 171 | del | 235 | 20241225 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | G | 171 | P | 5 | 20230928 |
| EPI_ISL_3796463 | NSP3 | hCoV-19/Sweden/101504536/2021 | G | 171 | insstopM | 1 | 20210329 |
| EPI_ISL_18166730 | NSP3 | hCoV-19/Jordan/MOH-CPHL-08/2023 | G | 171 | R | 115 | 20230731 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 171 | I | 1 | 20210318 |
| EPI_ISL_10943764 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8063/2022 | G | 171 | N | 2 | 20220203 |
| EPI_ISL_17715547 | NSP3 | hCoV-19/India/UP-MRU-ICMR-Insacog-18/2023 | Q | 172 | stop | 55 | 20230429 |
| EPI_ISL_18545715 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGNQY/2023 | Q | 172 | S | 3 | 20231110 |
| EPI_ISL_14651076 | NSP3 | hCoV-19/USA/NY-CDC-LC0827698/2022 | Q | 172 | Z | 1 | 20220805 |
| EPI_ISL_19364002 | NSP3 | hCoV-19/India/RJ-INSACOG-GBRC14111/2024 | Q | 172 | H | 66 | 20240424 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Q | 172 | Y | 4 | 20240315 |
| EPI_ISL_8049918 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7089/2021 | Q | 172 | G | 1 | 20211129 |
| EPI_ISL_19674195 | NSP3 | hCoV-19/Australia/QLD0x015013/2024 | Q | 172 | del | 233 | 20241225 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | Q | 172 | A | 2 | 20230419 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | Q | 172 | R | 467 | 20250329 |
| EPI_ISL_12702541 | NSP3 | hCoV-19/Luxembourg/LNS3892036/2022 | Q | 172 | I | 1 | 20220419 |
| EPI_ISL_8482878 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-70094/2021 | Q | 172 | N | 4 | 20211218 |
| EPI_ISL_18435041 | NSP3 | hCoV-19/Australia/QLD0x013A5C/2023 | Q | 172 | E | 8 | 20231010 |
| EPI_ISL_3796463 | NSP3 | hCoV-19/Sweden/101504536/2021 | Q | 172 | M | 1 | 20210329 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | Q | 172 | V | 5 | 20230403 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | Q | 172 | D | 2 | 20240101 |
| EPI_ISL_19780718 | NSP3 | hCoV-19/USA/PA-DHSS-1237/2025 | Q | 172 | P | 75 | 20250302 |
| EPI_ISL_8812980 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111321-1253/2021 | Q | 172 | insRR | 1 | 20211113 |
| EPI_ISL_19721556 | NSP3 | hCoV-19/USA/WI-WSLH-2403377/2024 | Q | 172 | L | 890 | 20241217 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | Q | 172 | insTTEMLAKAL | 3 | 20230425 |
| EPI_ISL_19603184 | NSP3 | hCoV-19/Chile/VS-85530/2024 | Q | 172 | K | 76 | 20241025 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | Q | 172 | T | 6 | 20230217 |
| EPI_ISL_10834859 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82579/2022 | Q | 173 | insMIV | 2 | 20220118 |
| EPI_ISL_16258482 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2062/2022 | Q | 173 | V | 2 | 20220730 |
| EPI_ISL_18867756 | NSP3 | hCoV-19/Canada/ON-KHS-00738-v1/2024 | Q | 173 | P | 34 | 20240124 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | Q | 173 | T | 2 | 20230403 |
| EPI_ISL_3796463 | NSP3 | hCoV-19/Sweden/101504536/2021 | Q | 173 | I | 1 | 20210329 |
| EPI_ISL_8049918 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7089/2021 | Q | 173 | F | 1 | 20211129 |
| EPI_ISL_19262606 | NSP3 | hCoV-19/env/Germany/BY-LGL-6270260/2024 | Q | 173 | stop | 22 | 20240626 |
| EPI_ISL_19726243 | NSP3 | hCoV-19/Italy/VEN-ULSS2-0107375501_TV/2025 | Q | 173 | R | 1409 | 20250107 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Q | 173 | G | 1 | 20230420 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | Q | 173 | Y | 1 | 20200608 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Q | 173 | E | 77 | 20240315 |
| EPI_ISL_19414629 | NSP3 | hCoV-19/Brazil/RS-LGBM-HMV-01-0676-F/2024 | Q | 173 | L | 188 | 20240307 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | Q | 173 | N | 1 | 20221118 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | Q | 173 | insV | 1 | 20221118 |
| EPI_ISL_10834859 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82579/2022 | Q | 173 | M | 46 | 20220118 |
| EPI_ISL_10477741 | NSP3 | hCoV-19/England/ALDP-370B946/2022 | Q | 173 | insFGVH | 1 | 20220215 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | Q | 173 | insS | 1 | 20230419 |
| EPI_ISL_16407939 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1104/2022 | Q | 173 | C | 1 | 20221214 |
| EPI_ISL_18545715 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGNQY/2023 | Q | 173 | D | 2 | 20231110 |
| EPI_ISL_19805315 | NSP3 | hCoV-19/USA/NY-URMC-P2S1U368-1/2024 | Q | 173 | K | 92 | 20241226 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | Q | 173 | del | 452 | 20250322 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | Q | 173 | A | 2 | 20230419 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 173 | S | 11 | 20220210 |
| EPI_ISL_19693018 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YR1R6/2025 | Q | 173 | H | 389 | 20250106 |
| EPI_ISL_18770856 | NSP3 | hCoV-19/Singapore/R2MQ52/2024 | Q | 173 | Z | 3 | 20240105 |
| EPI_ISL_14147673 | NSP3 | hCoV-19/Luxembourg/LNS8540602/2022 | D | 174 | H | 3 | 20220706 |
| EPI_ISL_19765331 | NSP3 | hCoV-19/USA/WI-UW-17009/2024 | D | 174 | C | 1 | 20240717 |
| EPI_ISL_19503529 | NSP3 | hCoV-19/USA/IL-RIPHL_123551_G/2024 | D | 174 | G | 1068 | 20241005 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | D | 174 | R | 2 | 20220205 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | D | 174 | insQstop | 2 | 20220205 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | D | 174 | T | 3 | 20230419 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | D | 174 | L | 3 | 20230217 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | D | 174 | del | 296 | 20250322 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | D | 174 | P | 2 | 20230403 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | D | 174 | K | 4 | 20230425 |
| EPI_ISL_18247101 | NSP3 | hCoV-19/USA/MS-MSPHL-0487/2023 | D | 174 | V | 4 | 20230828 |
| EPI_ISL_19818370 | NSP3 | hCoV-19/France/IDF-RELAB-IPP03656/2025 | D | 174 | N | 893 | 20250304 |
| EPI_ISL_9808231 | NSP3 | hCoV-19/env/USA/CA-SEARCH-68174/2022 | D | 174 | insGR | 1 | 20220113 |
| EPI_ISL_19792183 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGBCP/2025 | D | 174 | Y | 2438 | 20250303 |
| EPI_ISL_15005651 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1112/2021 | D | 174 | I | 1 | 20211009 |
| EPI_ISL_19799905 | NSP3 | hCoV-19/USA/TX-HMH-M-147116/2024 | D | 174 | B | 24 | 20241220 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | D | 174 | F | 3 | 20230928 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | D | 174 | Q | 3 | 20240101 |
| EPI_ISL_18166730 | NSP3 | hCoV-19/Jordan/MOH-CPHL-08/2023 | D | 174 | stop | 27 | 20230731 |
| EPI_ISL_18115377 | NSP3 | hCoV-19/Vietnam/HCMC-M170-S47/2023 | D | 174 | A | 190 | 20230527 |
| EPI_ISL_13271284 | NSP3 | hCoV-19/France/OCC-cerba-22T0838083/2022 | D | 174 | S | 3 | 20220530 |
| EPI_ISL_19789228 | NSP3 | hCoV-19/Greece/PHLnetwork_6317/2024 | D | 174 | E | 123 | 20241122 |
| EPI_ISL_15889705 | NSP3 | hCoV-19/USA/AK-USAFSAM-S20227/2022 | G | 175 | W | 1 | 20220816 |
| EPI_ISL_19773779 | NSP3 | hCoV-19/Japan/NCIPHE-FR055-0112/2025 | G | 175 | S | 19901 | 20250213 |
| EPI_ISL_19755081 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC46232/2025 | G | 175 | C | 1678 | 20250116 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | G | 175 | I | 1 | 20211122 |
| EPI_ISL_18451057 | NSP3 | hCoV-19/Israel/ICH-741199630/2023 | G | 175 | N | 17 | 20231017 |
| EPI_ISL_17766977 | NSP3 | hCoV-19/Morocco/INH-261305/2021 | G | 175 | L | 1 | 20210115 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | G | 175 | A | 5 | 20230419 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | G | 175 | T | 3 | 20220804 |
| EPI_ISL_19813274 | NSP3 | hCoV-19/Japan/FR050-0081/2025 | G | 175 | D | 2219 | 20250310 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | G | 175 | K | 7 | 20230403 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | G | 175 | insK | 1 | 20210803 |
| EPI_ISL_19688409 | NSP3 | hCoV-19/Canada/AB-ABPHL-130485/2025 | G | 175 | V | 469 | 20250102 |
| EPI_ISL_18545715 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGNQY/2023 | G | 175 | Y | 2 | 20231110 |
| EPI_ISL_18473733 | NSP3 | hCoV-19/Italy/EMR_AUSLRomagna_C045-23-33/2023 | G | 175 | R | 8 | 20231026 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | G | 175 | del | 564 | 20250322 |
| EPI_ISL_18545715 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGNQY/2023 | S | 176 | Y | 14 | 20231110 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | S | 176 | M | 43 | 20210419 |
| EPI_ISL_14903128 | NSP3 | hCoV-19/USA/CA-HLX-STM-M7F8FHRNX/2022 | S | 176 | insGQE | 1 | 20220816 |
| EPI_ISL_19819656 | NSP3 | hCoV-19/Singapore/Y25R14MSC80/2025 | S | 176 | N | 1455 | 20250401 |
| EPI_ISL_19470095 | NSP3 | hCoV-19/Italy/LOM-UNIBS-09183697/2024 | S | 176 | C | 619 | 20240918 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | S | 176 | V | 4 | 20230403 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | S | 176 | A | 5 | 20230928 |
| EPI_ISL_12471217 | NSP3 | hCoV-19/USA/ID-IBL-814757/2022 | S | 176 | K | 5 | 20220419 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | S | 176 | D | 1 | 20230420 |
| EPI_ISL_19560681 | NSP3 | hCoV-19/Brazil/SP-IAL-358001101/2024 | S | 176 | R | 200 | 20241019 |
| EPI_ISL_19803505 | NSP3 | hCoV-19/USA/WI-WSLH-2501011/2025 | S | 176 | I | 954 | 20250305 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | S | 176 | P | 3 | 20230425 |
| EPI_ISL_15889705 | NSP3 | hCoV-19/USA/AK-USAFSAM-S20227/2022 | S | 176 | L | 3 | 20220816 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | S | 176 | E | 1 | 20210803 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | S | 176 | del | 524 | 20250322 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | S | 176 | T | 22 | 20240315 |
| EPI_ISL_19821968 | NSP3 | hCoV-19/USA/NY-CDC-LC1136165/2025 | S | 176 | G | 1116 | 20250328 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | S | 176 | Q | 28 | 20230217 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | E | 177 | N | 2 | 20220804 |
| EPI_ISL_9152765 | NSP3 | hCoV-19/USA/AZ-TG1170473/2021 | E | 177 | I | 44 | 20211217 |
| EPI_ISL_17343297 | NSP3 | hCoV-19/USA/AZ-ASU99890/2023 | E | 177 | Q | 18 | 20230310 |
| EPI_ISL_19002199 | NSP3 | hCoV-19/Wales/CLIMB-CM7YKWET/2024 | E | 177 | Z | 16 | 20240305 |
| EPI_ISL_19782532 | NSP3 | hCoV-19/USA/NC-UM-G25Y06K6/2025 | E | 177 | G | 620 | 20250107 |
| EPI_ISL_19825244 | NSP3 | hCoV-19/USA/NY-NYULH-22523/2025 | E | 177 | D | 8762 | 20250402 |
| EPI_ISL_19735483 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56302/2025 | E | 177 | K | 3583 | 20250123 |
| EPI_ISL_17675510 | NSP3 | hCoV-19/Brazil/MG-LBI-GP54/2021 | E | 177 | insGGG | 1 | 20210601 |
| EPI_ISL_19732268 | NSP3 | hCoV-19/Sweden/C-000200822405N2/2025 | E | 177 | A | 470 | 20250109 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | E | 177 | insstopQS | 1 | 20210803 |
| EPI_ISL_18545715 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGNQY/2023 | E | 177 | S | 27 | 20231110 |
| EPI_ISL_16761930 | NSP3 | hCoV-19/USA/TX-HMH-M-124157/2023 | E | 177 | stop | 9 | 20230124 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | E | 177 | del | 522 | 20250322 |
| EPI_ISL_13871230 | NSP3 | hCoV-19/USA/ID-IBL-833144/2022 | E | 177 | R | 3 | 20220630 |
| EPI_ISL_19821975 | NSP3 | hCoV-19/USA/PA-CDC-LC1136171/2025 | E | 177 | V | 105 | 20250328 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | E | 177 | F | 1 | 20230419 |
| EPI_ISL_19747125 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00051/2022 | E | 177 | insS | 1 | 20221220 |
| EPI_ISL_10834859 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82579/2022 | E | 177 | L | 3 | 20220118 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | E | 177 | T | 6 | 20230425 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | E | 177 | Y | 9 | 20220118 |
| EPI_ISL_17766977 | NSP3 | hCoV-19/Morocco/INH-261305/2021 | E | 177 | H | 2 | 20210115 |
| EPI_ISL_19497402 | NSP3 | hCoV-19/Sweden/F-91625533LC/2024 | D | 178 | E | 66 | 20241006 |
| EPI_ISL_19803163 | NSP3 | hCoV-19/France/IDF-RELAB-IPP03462/2025 | D | 178 | N | 1178 | 20250228 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | D | 178 | S | 9 | 20220118 |
| EPI_ISL_17766977 | NSP3 | hCoV-19/Morocco/INH-261305/2021 | D | 178 | insL | 1 | 20210115 |
| EPI_ISL_19478720 | NSP3 | hCoV-19/Canada/ON-KHS-04766-v1/2024 | D | 178 | G | 545 | 20241001 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | D | 178 | del | 529 | 20250322 |
| EPI_ISL_19068369 | NSP3 | hCoV-19/USA/CA-CDPH-500136026/2024 | D | 178 | B | 24 | 20240122 |
| EPI_ISL_15699673 | NSP3 | hCoV-19/Ireland/SO-NVRL-ecS22IRL00452941/2022 | D | 178 | H | 32 | 20221007 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | D | 178 | I | 4 | 20211122 |
| EPI_ISL_9152765 | NSP3 | hCoV-19/USA/AZ-TG1170473/2021 | D | 178 | R | 1 | 20211217 |
| EPI_ISL_19791389 | NSP3 | hCoV-19/Russia/SPE-RII-MH225713S/2025 | D | 178 | Y | 2569 | 20250210 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | D | 178 | A | 39 | 20240101 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 178 | T | 5 | 20220210 |
| EPI_ISL_12448686 | NSP3 | hCoV-19/Luxembourg/LNS2918668/2022 | D | 178 | insV | 1 | 20220225 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | D | 178 | V | 52 | 20230217 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | D | 178 | K | 6 | 20230412 |
| EPI_ISL_18863870 | NSP3 | hCoV-19/Italy/LOM-UniMI184/2024 | D | 178 | L | 2 | 20240112 |
| EPI_ISL_8035693 | NSP3 | hCoV-19/Pakistan/Nano B3 S-07/2021 | D | 178 | Q | 2 | 20211211 |
| EPI_ISL_19699714 | NSP3 | hCoV-19/USA/CA-PFZ03418/2025 | N | 179 | T | 139 | 20250102 |
| EPI_ISL_8049919 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7131/2021 | N | 179 | F | 1 | 20211201 |
| EPI_ISL_19805367 | NSP3 | hCoV-19/USA/NY-URMC-P2S1U422-1/2024 | N | 179 | K | 227 | 20241227 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | N | 179 | L | 2 | 20230419 |
| EPI_ISL_18824077 | NSP3 | hCoV-19/Nigeria/NCDC-NRL-GL-006/2024 | N | 179 | H | 36 | 20240104 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | N | 179 | Q | 1 | 20220201 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 179 | C | 1 | 20210318 |
| EPI_ISL_17801404 | NSP3 | hCoV-19/Argentina/INEI124328/2022 | N | 179 | I | 18 | 20221229 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | N | 179 | insY | 1 | 20221119 |
| EPI_ISL_16282075 | NSP3 | hCoV-19/Scotland/SCOT-22246/2022 | N | 179 | R | 2 | 20221127 |
| EPI_ISL_19688522 | NSP3 | hCoV-19/Canada/AB-ABPHL-130638/2025 | N | 179 | D | 683 | 20250103 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | N | 179 | insXCstop | 1 | 20210716 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | N | 179 | A | 2 | 20230403 |
| EPI_ISL_19663017 | NSP3 | hCoV-19/Canada/ON-PHL-202426954/2024 | N | 179 | Y | 434 | 20241227 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | N | 179 | B | 8 | 20240105 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | N | 179 | G | 5 | 20230217 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | N | 179 | P | 1 | 20211122 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | N | 179 | insI | 2 | 20210805 |
| EPI_ISL_19140716 | NSP3 | hCoV-19/Pakistan/13086498/2024 | N | 179 | stop | 1 | 20240101 |
| EPI_ISL_15005651 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1112/2021 | N | 179 | M | 1 | 20211009 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | N | 179 | V | 2 | 20220210 |
| EPI_ISL_19784937 | NSP3 | hCoV-19/Italy/EMR-IZSLER-063335-001-01/2025 | N | 179 | S | 519 | 20250210 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | N | 179 | del | 223 | 20250322 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | Q | 180 | insCstopG | 2 | 20220118 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Q | 180 | G | 4 | 20230420 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | Q | 180 | N | 8 | 20220118 |
| EPI_ISL_18863870 | NSP3 | hCoV-19/Italy/LOM-UniMI184/2024 | Q | 180 | A | 2 | 20240112 |
| EPI_ISL_11887726 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0688/2021 | Q | 180 | W | 1 | 20211229 |
| EPI_ISL_18414722 | NSP3 | hCoV-19/USA/NJ-PHEL-V23016814/2023 | Q | 180 | E | 15 | 20231009 |
| EPI_ISL_15249939 | NSP3 | hCoV-19/USA/WA-PHL-027651/2022 | Q | 180 | stop | 10 | 20220912 |
| EPI_ISL_19664105 | NSP3 | hCoV-19/USA/NJ-PHEL-V24014865/2024 | Q | 180 | L | 55 | 20241104 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | Q | 180 | insYSNNCstopG | 1 | 20220205 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | Q | 180 | V | 2 | 20210802 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | Q | 180 | M | 4 | 20230415 |
| EPI_ISL_16968889 | NSP3 | hCoV-19/England/BRBR-326CC3DB/2023 | Q | 180 | Z | 2 | 20230213 |
| EPI_ISL_19810394 | NSP3 | hCoV-19/Singapore/Y25R13MSC80/2025 | Q | 180 | K | 85 | 20250324 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | Q | 180 | del | 223 | 20250322 |
| EPI_ISL_19826031 | NSP3 | hCoV-19/Singapore/Y25R15MSC84/2025 | Q | 180 | H | 14439 | 20250408 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | Q | 180 | Y | 9 | 20230425 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 180 | F | 1 | 20220210 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | Q | 180 | S | 5 | 20230217 |
| EPI_ISL_18529717 | NSP3 | hCoV-19/USA/NY-SUNYQB-X7151/2023 | Q | 180 | P | 38 | 20231025 |
| EPI_ISL_19802017 | NSP3 | hCoV-19/USA/IL-RIPHL_81620_G/2025 | Q | 180 | R | 304 | 20250225 |
| EPI_ISL_19678597 | NSP3 | hCoV-19/USA/CT-DPH-1266937001/2024 | T | 181 | P | 65 | 20241209 |
| EPI_ISL_18821694 | NSP3 | hCoV-19/Ukraine/83460/2023 | T | 181 | S | 16 | 20231201 |
| EPI_ISL_19802129 | NSP3 | hCoV-19/USA/CA-PFZ04767/2025 | T | 181 | A | 406 | 20250305 |
| EPI_ISL_19365319 | NSP3 | hCoV-19/Canada/BC-BCCDC-727501/2024 | T | 181 | K | 138 | 20240811 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | T | 181 | N | 2 | 20220630 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | T | 181 | C | 2 | 20211009 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | T | 181 | del | 238 | 20250322 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | T | 181 | W | 1 | 20220105 |
| EPI_ISL_18247590 | NSP3 | hCoV-19/USA/NY-URMC-N6S1J286-1/2023 | T | 181 | F | 3 | 20230824 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | T | 181 | Y | 5 | 20230420 |
| EPI_ISL_18863870 | NSP3 | hCoV-19/Italy/LOM-UniMI184/2024 | T | 181 | V | 1 | 20240112 |
| EPI_ISL_19826514 | NSP3 | hCoV-19/USA/NY-PRL-250408_82G09/2025 | T | 181 | I | 13870 | 20250324 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | T | 181 | G | 2 | 20221119 |
| EPI_ISL_14093735 | NSP3 | hCoV-19/Colombia/ANT-CWOHC-VG-SEC03844V/2022 | T | 181 | insPAA | 1 | 20220620 |
| EPI_ISL_10831668 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83755/2022 | T | 181 | D | 1 | 20220120 |
| EPI_ISL_18465488 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-W03817/2023 | T | 181 | R | 9 | 20230515 |
| EPI_ISL_15889705 | NSP3 | hCoV-19/USA/AK-USAFSAM-S20227/2022 | T | 181 | Q | 10 | 20220816 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | T | 181 | E | 5 | 20230403 |
| EPI_ISL_15513744 | NSP3 | hCoV-19/Chile/AR-117494/2022 | T | 181 | L | 46 | 20221005 |
| EPI_ISL_8049919 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7131/2021 | T | 182 | F | 1 | 20211201 |
| EPI_ISL_19603328 | NSP3 | hCoV-19/Chile/AI-91364/2024 | T | 182 | A | 140 | 20241111 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | T | 182 | M | 3 | 20230415 |
| EPI_ISL_10834859 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82579/2022 | T | 182 | insVR | 2 | 20220118 |
| EPI_ISL_9152765 | NSP3 | hCoV-19/USA/AZ-TG1170473/2021 | T | 182 | Y | 2 | 20211217 |
| EPI_ISL_19813455 | NSP3 | hCoV-19/France/PAC-RELAB-HCL725000040001/2025 | T | 182 | I | 10254 | 20250321 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | T | 182 | stop | 1 | 20211009 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | T | 182 | R | 1 | 20210805 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | T | 182 | K | 4 | 20221119 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | T | 182 | V | 2 | 20230403 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | T | 182 | W | 2 | 20230412 |
| EPI_ISL_19816733 | NSP3 | hCoV-19/Australia/WA16897/2025 | T | 182 | del | 285 | 20250327 |
| EPI_ISL_19188991 | NSP3 | hCoV-19/USA/CA-SEARCH-140171/2024 | T | 182 | S | 17 | 20240413 |
| EPI_ISL_16453736 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-121956/2022 | T | 182 | L | 54 | 20221231 |
| EPI_ISL_15889705 | NSP3 | hCoV-19/USA/AK-USAFSAM-S20227/2022 | T | 182 | Q | 2 | 20220816 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | T | 182 | E | 6 | 20231007 |
| EPI_ISL_19342212 | NSP3 | hCoV-19/England/CLIMB-CM7YJW4Y/2024 | T | 182 | N | 308 | 20240810 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | T | 182 | D | 2 | 20220201 |
| EPI_ISL_19046640 | NSP3 | hCoV-19/Canada/AB-ABPHL-116467/2024 | T | 182 | P | 67 | 20240330 |
| EPI_ISL_19831933 | NSP3 | hCoV-19/England/CLIMB-CM7YGII8/2025 | T | 183 | I | 761199 | 20250406 |
| EPI_ISL_17711373 | NSP3 | hCoV-19/Thailand/NIC_SRN_2796/2023 | T | 183 | stop | 1 | 20230508 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | T | 183 | H | 1 | 20220804 |
| EPI_ISL_19489003 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-11J-MM00078R/2024 | T | 183 | S | 35 | 20241011 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | T | 183 | L | 12 | 20230412 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | T | 183 | W | 1 | 20220201 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | T | 183 | Y | 3 | 20230420 |
| EPI_ISL_19752442 | NSP3 | hCoV-19/Poland/WSSEGorzow-24S0321/2024 | T | 183 | insT | 32 | 20241120 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | T | 183 | V | 74 | 20230415 |
| EPI_ISL_13321905 | NSP3 | hCoV-19/France/GES-HMN-22052170694/2022 | T | 183 | insRYSC | 2 | 20220502 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | T | 183 | Q | 1 | 20200608 |
| EPI_ISL_19789439 | NSP3 | hCoV-19/Greece/PHLnetwork_ILI_175/2025 | T | 183 | N | 114 | 20250123 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | T | 183 | C | 1 | 20230217 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | T | 183 | P | 3 | 20221119 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | T | 183 | insstopYY | 1 | 20210804 |
| EPI_ISL_19772208 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10689/2025 | T | 183 | insKRG | 2 | 20250212 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | T | 183 | insD | 1 | 20230403 |
| EPI_ISL_19562390 | NSP3 | hCoV-19/Canada/ON-PHL-202421977/2024 | T | 183 | A | 211 | 20241115 |
| EPI_ISL_12448686 | NSP3 | hCoV-19/Luxembourg/LNS2918668/2022 | T | 183 | G | 1 | 20220225 |
| EPI_ISL_17207362 | NSP3 | hCoV-19/Singapore/R19MR149/2023 | T | 183 | insSLI | 2 | 20230306 |
| EPI_ISL_10563929 | NSP3 | hCoV-19/Thailand/NIC_CMI_SEQ3945/2022 | T | 183 | K | 2 | 20220110 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | T | 183 | D | 2 | 20220630 |
| EPI_ISL_15513744 | NSP3 | hCoV-19/Chile/AR-117494/2022 | T | 183 | F | 3 | 20221005 |
| EPI_ISL_19816733 | NSP3 | hCoV-19/Australia/WA16897/2025 | T | 183 | del | 400 | 20250327 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | I | 184 | A | 2 | 20230403 |
| EPI_ISL_19339384 | NSP3 | hCoV-19/Japan/6GA-236/2024 | I | 184 | V | 265 | 20240709 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | I | 184 | Y | 7 | 20230425 |
| EPI_ISL_19816568 | NSP3 | hCoV-19/South Korea/KDCA297191/2025 | I | 184 | N | 58 | 20250310 |
| EPI_ISL_19816733 | NSP3 | hCoV-19/Australia/WA16897/2025 | I | 184 | del | 339 | 20250327 |
| EPI_ISL_10959095 | NSP3 | hCoV-19/England/BRBR-395DF50/2022 | I | 184 | insPRRR | 1 | 20220305 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | I | 184 | P | 1 | 20220804 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | I | 184 | insVAD | 1 | 20230217 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | I | 184 | E | 3 | 20220811 |
| EPI_ISL_19768636 | NSP3 | hCoV-19/Taiwan/CDC-W41633/2025 | I | 184 | S | 329 | 20250210 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | I | 184 | Q | 1 | 20230420 |
| EPI_ISL_17255996 | NSP3 | hCoV-19/Germany/BB-RKI-I-1121870/2023 | I | 184 | K | 13 | 20230307 |
| EPI_ISL_19027080 | NSP3 | hCoV-19/Australia/NSW-ICPMR-53286/2024 | I | 184 | F | 130 | 20240317 |
| EPI_ISL_2603416 | NSP3 | hCoV-19/France/ARA-CHUGA-1065843103/2021 | I | 184 | R | 2 | 20210608 |
| EPI_ISL_15513744 | NSP3 | hCoV-19/Chile/AR-117494/2022 | I | 184 | G | 8 | 20221005 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | I | 184 | insPGQGLNG | 3 | 20230425 |
| EPI_ISL_19574125 | NSP3 | hCoV-19/USA/DE-CDC-LC1125635/2024 | I | 184 | M | 43 | 20241113 |
| EPI_ISL_11507493 | NSP3 | hCoV-19/Turkey/HSGM-G7540/2022 | I | 184 | D | 1 | 20220311 |
| EPI_ISL_19784156 | NSP3 | hCoV-19/USA/PA-CDC-LC1134900/2025 | I | 184 | T | 1072 | 20250306 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | I | 184 | insCstop | 1 | 20210803 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | I | 184 | L | 208 | 20231007 |
| EPI_ISL_19673121 | NSP3 | hCoV-19/USA/CA-CDPH-500145370/2024 | Q | 185 | L | 652 | 20241217 |
| EPI_ISL_19782090 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10810/2025 | Q | 185 | H | 152 | 20250221 |
| EPI_ISL_18247101 | NSP3 | hCoV-19/USA/MS-MSPHL-0487/2023 | Q | 185 | Y | 5 | 20230828 |
| EPI_ISL_19738454 | NSP3 | hCoV-19/Chile/AN-7327/2025 | Q | 185 | R | 591 | 20250118 |
| EPI_ISL_19076900 | NSP3 | hCoV-19/Mexico/CMX-INMEGEN-122-17/2024 | Q | 185 | E | 37 | 20240307 |
| EPI_ISL_19575308 | NSP3 | hCoV-19/Japan/NCGM-08074/2022 | Q | 185 | stop | 15 | 20221216 |
| EPI_ISL_13306878 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3801/2022 | Q | 185 | S | 3 | 20220427 |
| EPI_ISL_15292749 | NSP3 | hCoV-19/India/GA-NCCS-3055200226533/2021 | Q | 185 | F | 2 | 20211223 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | Q | 185 | insDG | 1 | 20220205 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | Q | 185 | A | 6 | 20230217 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | Q | 185 | D | 1 | 20220201 |
| EPI_ISL_19327948 | NSP3 | hCoV-19/Canada/NS-NSH-722237/2024 | Q | 185 | P | 196 | 20240712 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | Q | 185 | V | 1 | 20220811 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | Q | 185 | insFGA | 1 | 20221119 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | Q | 185 | N | 5 | 20230403 |
| EPI_ISL_18685084 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YESAM/2023 | Q | 185 | T | 4 | 20231212 |
| EPI_ISL_19513882 | NSP3 | hCoV-19/USA/FL-USAFSAM-S23135/2024 | Q | 185 | K | 461 | 20240918 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | Q | 185 | G | 1 | 20210803 |
| EPI_ISL_19816733 | NSP3 | hCoV-19/Australia/WA16897/2025 | Q | 185 | del | 416 | 20250327 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | T | 186 | F | 1 | 20211122 |
| EPI_ISL_18685084 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YESAM/2023 | T | 186 | S | 9 | 20231212 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 186 | N | 6 | 20230101 |
| EPI_ISL_19826634 | NSP3 | hCoV-19/USA/NY-PRL-250408_81G05/2025 | T | 186 | I | 3093 | 20250316 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | T | 186 | Y | 1 | 20200729 |
| EPI_ISL_19816733 | NSP3 | hCoV-19/Australia/WA16897/2025 | T | 186 | del | 562 | 20250327 |
| EPI_ISL_18423671 | NSP3 | hCoV-19/USA/TX-HMH-134642/2023 | T | 186 | Q | 31 | 20231003 |
| EPI_ISL_19831932 | NSP3 | hCoV-19/England/CLIMB-CM7YGUNB/2025 | T | 186 | P | 78 | 20250405 |
| EPI_ISL_19566681 | NSP3 | hCoV-19/Luxembourg/LNS4588403/2024 | T | 186 | K | 332 | 20240819 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | T | 186 | insP | 1 | 20210802 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | T | 186 | E | 2 | 20220201 |
| EPI_ISL_12320672 | NSP3 | hCoV-19/Turkey/HSGM-GS2191/2022 | T | 186 | R | 3 | 20220410 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | T | 186 | V | 3 | 20230217 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | T | 186 | D | 3 | 20220118 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | T | 186 | M | 5 | 20230415 |
| EPI_ISL_19667147 | NSP3 | hCoV-19/Denmark/DCGC-691496/2024 | T | 186 | A | 991 | 20241223 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | T | 186 | L | 4 | 20231007 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 187 | C | 3 | 20230101 |
| EPI_ISL_19765243 | NSP3 | hCoV-19/USA/NY-PRL-250225_81D06/2025 | I | 187 | L | 259 | 20250209 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | I | 187 | D | 1 | 20220811 |
| EPI_ISL_19385465 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGOJ4/2024 | I | 187 | M | 8 | 20240810 |
| EPI_ISL_19756802 | NSP3 | hCoV-19/Wales/CLIMB-CM7YKFS3/2025 | I | 187 | V | 636 | 20250214 |
| EPI_ISL_19497709 | NSP3 | hCoV-19/Canada/ON-KHS-04946-v1/2024 | I | 187 | insIGSF | 1 | 20241013 |
| EPI_ISL_19767023 | NSP3 | hCoV-19/USA/NE-RP251799/2025 | I | 187 | T | 321 | 20250225 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | I | 187 | Y | 3 | 20231007 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | I | 187 | K | 1 | 20230412 |
| EPI_ISL_18560665 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200650358N2/2023 | I | 187 | insRXXXXXXX | 1 | 20231120 |
| EPI_ISL_19195227 | NSP3 | hCoV-19/Canary Islands/CN-HUC-924150931/2024 | I | 187 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20240529 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | I | 187 | G | 3 | 20220118 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | I | 187 | P | 2 | 20230420 |
| EPI_ISL_10944436 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0402/2021 | I | 187 | H | 2 | 20211215 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | I | 187 | A | 44 | 20221118 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | I | 187 | del | 696 | 20250322 |
| EPI_ISL_19291552 | NSP3 | hCoV-19/France/ARA-HCL024113481601/2024 | I | 187 | S | 132 | 20240716 |
| EPI_ISL_15381067 | NSP3 | hCoV-19/USA/NY-PRL-221007_00K19/2022 | I | 187 | J | 4 | 20221005 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | I | 187 | E | 1 | 20210522 |
| EPI_ISL_18923372 | NSP3 | hCoV-19/New Zealand/24ZA1185/2024 | I | 187 | N | 11 | 20240206 |
| EPI_ISL_16886451 | NSP3 | hCoV-19/Germany/BB-RKI-I-1104199/2023 | I | 187 | F | 16 | 20230201 |
| EPI_ISL_18423671 | NSP3 | hCoV-19/USA/TX-HMH-134642/2023 | V | 188 | L | 39 | 20231003 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | V | 188 | insLFNLKKSKKKIGstopM | 1 | 20220105 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | V | 188 | E | 5 | 20230425 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | V | 188 | C | 4 | 20220804 |
| EPI_ISL_12896107 | NSP3 | hCoV-19/Denmark/DCGC-518822/2022 | V | 188 | D | 11 | 20220510 |
| EPI_ISL_19536691 | NSP3 | hCoV-19/England/CLIMB-CM7YGWDR/2024 | V | 188 | A | 265 | 20241031 |
| EPI_ISL_19782130 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10872/2025 | V | 188 | I | 512 | 20250220 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | V | 188 | T | 8 | 20230415 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | V | 188 | stop | 1 | 20200729 |
| EPI_ISL_18226341 | NSP3 | hCoV-19/env/India/MH-FMR_D3-54a/2023 | V | 188 | M | 1 | 20230313 |
| EPI_ISL_19195250 | NSP3 | hCoV-19/Wales/CLIMB-CM7YMIFO/2024 | V | 188 | F | 271 | 20240529 |
| EPI_ISL_18685084 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YESAM/2023 | V | 188 | R | 8 | 20231212 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 188 | K | 1 | 20230217 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | V | 188 | del | 880 | 20250322 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 188 | N | 1 | 20210318 |
| EPI_ISL_17962932 | NSP3 | hCoV-19/Austria/AGES-1140577/2023 | V | 188 | G | 34 | 20230627 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | V | 188 | Y | 2 | 20230403 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 188 | P | 1 | 20220210 |
| EPI_ISL_18226341 | NSP3 | hCoV-19/env/India/MH-FMR_D3-54a/2023 | E | 189 | M | 3 | 20230313 |
| EPI_ISL_19775760 | NSP3 | hCoV-19/USA/CO-CDPHE-43093443/2025 | E | 189 | D | 1126 | 20250225 |
| EPI_ISL_19572793 | NSP3 | hCoV-19/Spain/AS-HUCA-232486364/2024 | E | 189 | stop | 7 | 20241120 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | E | 189 | N | 4 | 20220811 |
| EPI_ISL_19711683 | NSP3 | hCoV-19/Japan/EIS11-252/2024 | E | 189 | G | 239 | 20241215 |
| EPI_ISL_18915336 | NSP3 | hCoV-19/USA/CA-SLOPH-C2247/2024 | E | 189 | V | 69 | 20240117 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | E | 189 | Y | 3 | 20220118 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | E | 189 | I | 2 | 20210522 |
| EPI_ISL_3825323 | NSP3 | hCoV-19/USA/NV-NSPHL-394943/2021 | E | 189 | insLL | 1 | 20210730 |
| EPI_ISL_18685084 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YESAM/2023 | E | 189 | Q | 21 | 20231212 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | E | 189 | del | 855 | 20250322 |
| EPI_ISL_10057479 | NSP3 | hCoV-19/USA/ID-IBL-789587/2022 | E | 189 | F | 2 | 20220126 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 189 | R | 50 | 20230101 |
| EPI_ISL_19765848 | NSP3 | hCoV-19/USA/CT-DPH-1276570001/2025 | E | 189 | K | 304 | 20250129 |
| EPI_ISL_18097197 | NSP3 | hCoV-19/Hong Kong/VB23129330/2023 | E | 189 | L | 2 | 20230729 |
| EPI_ISL_10149329 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-346160/2022 | E | 189 | W | 1 | 20220210 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | E | 189 | S | 1 | 20220205 |
| EPI_ISL_19656922 | NSP3 | hCoV-19/Germany/BW-RKI-I-1147022/2024 | E | 189 | A | 187 | 20241128 |
| EPI_ISL_16937537 | NSP3 | hCoV-19/England/BRBR-326C6D79/2023 | E | 189 | Z | 8 | 20230208 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | E | 189 | T | 3 | 20230412 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | V | 190 | K | 4 | 20220811 |
| EPI_ISL_16258482 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2062/2022 | V | 190 | P | 1 | 20220730 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | V | 190 | E | 1 | 20221118 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | V | 190 | Y | 1 | 20230412 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | V | 190 | S | 1 | 20211122 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | V | 190 | N | 3 | 20230403 |
| EPI_ISL_19565578 | NSP3 | hCoV-19/Sweden/X-87797639PL/2024 | V | 190 | L | 43 | 20241112 |
| EPI_ISL_19780335 | NSP3 | hCoV-19/Gansu/BYCDC-018/2025 | V | 190 | I | 953 | 20250225 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | V | 190 | del | 876 | 20250322 |
| EPI_ISL_2603416 | NSP3 | hCoV-19/France/ARA-CHUGA-1065843103/2021 | V | 190 | Q | 1 | 20210608 |
| EPI_ISL_19756612 | NSP3 | hCoV-19/Liaoning/LNCDC-034-2/2025 | V | 190 | F | 396 | 20250220 |
| EPI_ISL_14907032 | NSP3 | hCoV-19/USA/ID-IBL-848184/2022 | V | 190 | C | 2 | 20220822 |
| EPI_ISL_19663498 | NSP3 | hCoV-19/Canada/ON-PHL-202500405/2024 | V | 190 | A | 1327 | 20241226 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | V | 190 | stop | 1 | 20210803 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | V | 190 | T | 47 | 20220118 |
| EPI_ISL_14648017 | NSP3 | hCoV-19/England/LSPA-3F697BD/2022 | V | 190 | insLF | 3 | 20220815 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | V | 190 | D | 1 | 20210522 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | V | 190 | R | 1 | 20220804 |
| EPI_ISL_3588754 | NSP3 | hCoV-19/USA/ID-IBL-746258/2021 | V | 190 | insLSNNCstopG | 1 | 20210801 |
| EPI_ISL_13306958 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3832/2022 | V | 190 | G | 6 | 20220510 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | Q | 191 | T | 1 | 20210803 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | Q | 191 | F | 1 | 20221118 |
| EPI_ISL_18423776 | NSP3 | hCoV-19/USA/TX-HMH-134797/2023 | Q | 191 | Z | 4 | 20231010 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | Q | 191 | del | 920 | 20250322 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | Q | 191 | I | 46 | 20220811 |
| EPI_ISL_19803721 | NSP3 | hCoV-19/USA/WI-WSLH-2500576/2025 | Q | 191 | R | 1710 | 20250128 |
| EPI_ISL_19557372 | NSP3 | hCoV-19/France/BFC-IPP12320/2024 | Q | 191 | L | 263 | 20241029 |
| EPI_ISL_15669004 | NSP3 | hCoV-19/USA/NY-PRL-221028_02B09/2022 | Q | 191 | insF | 3 | 20221024 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | Q | 191 | D | 1 | 20230403 |
| EPI_ISL_19198808 | NSP3 | hCoV-19/Canada/BC-BCCDC-715211/2024 | Q | 191 | K | 99 | 20240521 |
| EPI_ISL_18247101 | NSP3 | hCoV-19/USA/MS-MSPHL-0487/2023 | Q | 191 | stop | 4 | 20230828 |
| EPI_ISL_7159751 | NSP3 | hCoV-19/USA/NY-PA-PBRI-CT-1307/2021 | Q | 191 | C | 1 | 20211129 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | Q | 191 | S | 9 | 20220205 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | Q | 191 | E | 7 | 20230217 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | Q | 191 | M | 2 | 20230412 |
| EPI_ISL_18874037 | NSP3 | hCoV-19/USA/TX-DSHS-26359/2024 | Q | 191 | P | 58 | 20240121 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | Q | 191 | insLNstopRWNL | 1 | 20210804 |
| EPI_ISL_18785129 | NSP3 | hCoV-19/USA/CA-HLX-STM-B7R7T4E4K/2023 | Q | 191 | H | 9 | 20231217 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | Q | 191 | A | 1 | 20210522 |
| EPI_ISL_18226341 | NSP3 | hCoV-19/env/India/MH-FMR_D3-54a/2023 | Q | 191 | V | 2 | 20230313 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | Q | 191 | N | 13 | 20231007 |
| EPI_ISL_10057479 | NSP3 | hCoV-19/USA/ID-IBL-789587/2022 | Q | 191 | insLLRFNLNstopRWNL | 3 | 20220126 |
| EPI_ISL_17789668 | NSP3 | hCoV-19/Canada/ON-PHL-23-25634/2023 | P | 192 | R | 54 | 20230605 |
| EPI_ISL_14907032 | NSP3 | hCoV-19/USA/ID-IBL-848184/2022 | P | 192 | V | 2 | 20220822 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | P | 192 | D | 3 | 20220205 |
| EPI_ISL_19833049 | NSP3 | hCoV-19/France/ARA-HCL025056183701/2025 | P | 192 | H | 326 | 20250404 |
| EPI_ISL_19563692 | NSP3 | hCoV-19/Netherlands/GE-RIVM-143168/2024 | P | 192 | A | 6 | 20241005 |
| EPI_ISL_10219504 | NSP3 | hCoV-19/France/GES-HMN-22022030597/2022 | P | 192 | I | 1 | 20220131 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | P | 192 | Q | 3 | 20221118 |
| EPI_ISL_15669004 | NSP3 | hCoV-19/USA/NY-PRL-221028_02B09/2022 | P | 192 | K | 6 | 20221024 |
| EPI_ISL_19827129 | NSP3 | hCoV-19/Chile/CO-ISPC-27041/2025 | P | 192 | S | 2456 | 20250330 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | P | 192 | W | 1 | 20210803 |
| EPI_ISL_19826781 | NSP3 | hCoV-19/USA/MN-MDH-46644/2025 | P | 192 | L | 2672 | 20250327 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | P | 192 | E | 1 | 20220210 |
| EPI_ISL_19713002 | NSP3 | hCoV-19/USA/NY-Wadsworth-25000170-01/2024 | P | 192 | T | 176 | 20241228 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | P | 192 | del | 750 | 20250322 |
| EPI_ISL_18226341 | NSP3 | hCoV-19/env/India/MH-FMR_D3-54a/2023 | P | 192 | N | 5 | 20230313 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | P | 192 | insFNstopRWNLH | 1 | 20210812 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | P | 192 | G | 1 | 20231007 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | P | 192 | Y | 1 | 20220811 |
| EPI_ISL_19710685 | NSP3 | hCoV-19/Canada/ON-KHS-05896-v1/2024 | Q | 193 | H | 265 | 20241209 |
| EPI_ISL_17959320 | NSP3 | hCoV-19/Canada/QC-L00628380001/2023 | Q | 193 | P | 56 | 20230620 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | Q | 193 | V | 5 | 20230425 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | Q | 193 | del | 809 | 20250322 |
| EPI_ISL_19483027 | NSP3 | hCoV-19/Canada/ON-PHL-202416195/2024 | Q | 193 | R | 635 | 20241002 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | Q | 193 | E | 13 | 20230928 |
| EPI_ISL_19756445 | NSP3 | hCoV-19/Russia/SPE-RII-MH222980S/2024 | Q | 193 | K | 44 | 20241211 |
| EPI_ISL_4808533 | NSP3 | hCoV-19/USA/MN-CDC-IBX306216703309/2021 | Q | 193 | insPQ | 2 | 20210917 |
| EPI_ISL_11887726 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0688/2021 | Q | 193 | A | 1 | 20211229 |
| EPI_ISL_19411252 | NSP3 | hCoV-19/USA/RI_RISHL_01743/2024 | Q | 193 | L | 131 | 20240816 |
| EPI_ISL_1797590 | NSP3 | hCoV-19/France/BRE-B7-22/2020 | Q | 193 | Z | 8 | 20200408 |
| EPI_ISL_2370880 | NSP3 | hCoV-19/Greece/196399/2021 | Q | 193 | G | 2 | 20210501 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | Q | 193 | Y | 2 | 20220205 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | Q | 193 | N | 8 | 20231007 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | Q | 193 | W | 1 | 20210622 |
| EPI_ISL_19188645 | NSP3 | hCoV-19/USA/TX-HMH-M-140963/2024 | Q | 193 | stop | 3 | 20240417 |
| EPI_ISL_19140722 | NSP3 | hCoV-19/Pakistan/CHL30086/2023 | Q | 193 | F | 1 | 20230823 |
| EPI_ISL_10831668 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83755/2022 | Q | 193 | S | 6 | 20220120 |
| EPI_ISL_18604860 | NSP3 | hCoV-19/Singapore/R89MR287/2023 | L | 194 | J | 2 | 20231202 |
| EPI_ISL_19574014 | NSP3 | hCoV-19/Germany/NW-RKI-I-1146243/2024 | L | 194 | S | 101 | 20241104 |
| EPI_ISL_19090793 | NSP3 | hCoV-19/Russia/PRI-P383/2023 | L | 194 | F | 110 | 20231201 |
| EPI_ISL_18226336 | NSP3 | hCoV-19/env/India/MH-FMR_D2-53b/2023 | L | 194 | stop | 11 | 20230308 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | L | 194 | K | 3 | 20230403 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 194 | P | 4 | 20220210 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | L | 194 | del | 815 | 20250322 |
| EPI_ISL_7572818 | NSP3 | hCoV-19/England/MILK-2D7C321/2021 | L | 194 | insLRFK | 1 | 20211206 |
| EPI_ISL_18052710 | NSP3 | hCoV-19/Wales/CLIMB-CM7YKZAE/2023 | L | 194 | V | 20 | 20230708 |
| EPI_ISL_12471217 | NSP3 | hCoV-19/USA/ID-IBL-814757/2022 | L | 194 | D | 1 | 20220419 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | L | 194 | insR | 1 | 20210804 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | L | 194 | Y | 1 | 20211104 |
| EPI_ISL_14567780 | NSP3 | hCoV-19/England/LSPA-3F592FB/2022 | L | 194 | T | 13 | 20220810 |
| EPI_ISL_18936138 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00045/2023 | L | 194 | Q | 4 | 20230410 |
| EPI_ISL_19799537 | NSP3 | hCoV-19/USA/TX-HMH-M-147474/2025 | L | 194 | I | 33 | 20250205 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | L | 194 | H | 1 | 20221118 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | L | 194 | N | 2 | 20220811 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | L | 194 | E | 5 | 20230928 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | E | 195 | L | 51 | 20230403 |
| EPI_ISL_11150267 | NSP3 | hCoV-19/England/NEWC-3A521AF/2022 | E | 195 | Z | 14 | 20220310 |
| EPI_ISL_10057479 | NSP3 | hCoV-19/USA/ID-IBL-789587/2022 | E | 195 | F | 5 | 20220126 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | E | 195 | insKCKSA | 3 | 20230425 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | E | 195 | S | 2 | 20230412 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | E | 195 | H | 2 | 20231007 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | E | 195 | del | 755 | 20250322 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | E | 195 | Y | 1 | 20210522 |
| EPI_ISL_19695060 | NSP3 | hCoV-19/Denmark/DCGC-691585/2024 | E | 195 | Q | 41 | 20241209 |
| EPI_ISL_19212905 | NSP3 | hCoV-19/env/India/MH-NCL-246-26/2024 | E | 195 | stop | 17 | 20240226 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | E | 195 | I | 3 | 20221118 |
| EPI_ISL_19733147 | NSP3 | hCoV-19/Canada/AB-ABPHL-131153/2025 | E | 195 | G | 262 | 20250128 |
| EPI_ISL_17530358 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13977/2023 | E | 195 | R | 20 | 20230406 |
| EPI_ISL_18215766 | NSP3 | hCoV-19/Japan/PG-557955/2023 | E | 195 | V | 16 | 20230807 |
| EPI_ISL_19671367 | NSP3 | hCoV-19/Finland/THL-09581/2024 | E | 195 | D | 6766 | 20241212 |
| EPI_ISL_13306958 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3832/2022 | E | 195 | W | 1 | 20220510 |
| EPI_ISL_19140722 | NSP3 | hCoV-19/Pakistan/CHL30086/2023 | E | 195 | N | 3 | 20230823 |
| EPI_ISL_19825279 | NSP3 | hCoV-19/USA/NY-NYULH-22561/2025 | E | 195 | K | 1561 | 20250403 |
| EPI_ISL_18731379 | NSP3 | hCoV-19/Chile/RM-94425/2023 | E | 195 | A | 97 | 20231208 |
| EPI_ISL_19825347 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-31C-MM00036U/2025 | M | 196 | I | 3531 | 20250331 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | M | 196 | S | 1 | 20211104 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | M | 196 | Q | 8 | 20230928 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | M | 196 | D | 5 | 20230217 |
| EPI_ISL_19597981 | NSP3 | hCoV-19/Netherlands/OV-RIVM-144254/2024 | M | 196 | V | 742 | 20241118 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | M | 196 | del | 788 | 20250322 |
| EPI_ISL_19784788 | NSP3 | hCoV-19/Japan/FR021-0178/2025 | M | 196 | L | 441 | 20250214 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | M | 196 | F | 48 | 20230425 |
| EPI_ISL_1236222 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-26442/2021 | M | 196 | C | 1 | 20210302 |
| EPI_ISL_19813267 | NSP3 | hCoV-19/Japan/FR085-0010/2025 | M | 196 | T | 1134 | 20250321 |
| EPI_ISL_17305643 | NSP3 | hCoV-19/Guinea/CERFIG-38322/2023 | M | 196 | N | 10 | 20230216 |
| EPI_ISL_19802216 | NSP3 | hCoV-19/USA/CA-PFZ04886/2025 | M | 196 | K | 424 | 20250313 |
| EPI_ISL_16258482 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2062/2022 | M | 196 | E | 3 | 20220730 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | M | 196 | Y | 1 | 20230403 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | M | 196 | G | 1 | 20210804 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | M | 196 | W | 16 | 20230415 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | M | 196 | P | 1 | 20231007 |
| EPI_ISL_19453101 | NSP3 | hCoV-19/USA/CO-CDPHE-42269474/2024 | M | 196 | R | 53 | 20240815 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | E | 197 | Y | 5 | 20230425 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | E | 197 | L | 15 | 20240227 |
| EPI_ISL_18255167 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-19/2023 | E | 197 | insRL | 3 | 20230419 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | E | 197 | I | 2 | 20220804 |
| EPI_ISL_19220017 | NSP3 | hCoV-19/USA/VA-VCUVAS3-MIAD493806/2023 | E | 197 | V | 12 | 20231130 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | E | 197 | N | 30 | 20230415 |
| EPI_ISL_12471217 | NSP3 | hCoV-19/USA/ID-IBL-814757/2022 | E | 197 | H | 1 | 20220419 |
| EPI_ISL_19334598 | NSP3 | hCoV-19/Egypt/CPHL-EGY24137/2024 | E | 197 | Q | 6 | 20240624 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | E | 197 | T | 3 | 20221118 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | E | 197 | insKQDDKKIKAC | 1 | 20211122 |
| EPI_ISL_3756619 | NSP3 | hCoV-19/USA/ID-IBL-744731/2021 | E | 197 | W | 1 | 20210802 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | E | 197 | del | 798 | 20250322 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | E | 197 | P | 1 | 20210622 |
| EPI_ISL_8994349 | NSP3 | hCoV-19/England/BRBR-32DB6F2/2022 | E | 197 | Z | 4 | 20220116 |
| EPI_ISL_18689959 | NSP3 | hCoV-19/USA/TX-HMH-M-136045/2023 | E | 197 | stop | 10 | 20231207 |
| EPI_ISL_19156199 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00020291_01/2023 | E | 197 | D | 41 | 20231227 |
| EPI_ISL_19641077 | NSP3 | hCoV-19/USA/CA-PFZ02220/2024 | E | 197 | G | 740 | 20241207 |
| EPI_ISL_19819652 | NSP3 | hCoV-19/Singapore/Y25R14MSC26/2025 | E | 197 | K | 3494 | 20250325 |
| EPI_ISL_17500711 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13654/2023 | E | 197 | R | 3 | 20230321 |
| EPI_ISL_18943510 | NSP3 | hCoV-19/USA/NY-SUNYQB-X8766/2024 | E | 197 | A | 140 | 20240208 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | L | 198 | A | 2 | 20230217 |
| EPI_ISL_19832985 | NSP3 | hCoV-19/Japan/FR032-0076/2025 | L | 198 | F | 3640 | 20250225 |
| EPI_ISL_2603416 | NSP3 | hCoV-19/France/ARA-CHUGA-1065843103/2021 | L | 198 | stop | 2 | 20210608 |
| EPI_ISL_11930093 | NSP3 | hCoV-19/England/DHSC-CYBJFB4/2022 | L | 198 | Y | 2 | 20220221 |
| EPI_ISL_19802563 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11005/2025 | L | 198 | insKFW | 1 | 20250228 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | L | 198 | G | 2 | 20230412 |
| EPI_ISL_19543947 | NSP3 | hCoV-19/Canada/BC-BCCDC-747533/2024 | L | 198 | P | 236 | 20241026 |
| EPI_ISL_3756619 | NSP3 | hCoV-19/USA/ID-IBL-744731/2021 | L | 198 | N | 2 | 20210802 |
| EPI_ISL_19032861 | NSP3 | hCoV-19/India/MH_BJCOG_6506/2024 | L | 198 | H | 209 | 20240215 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | L | 198 | del | 848 | 20250322 |
| EPI_ISL_19143509 | NSP3 | hCoV-19/Pakistan/GRH42662/2024 | L | 198 | Q | 7 | 20240320 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | L | 198 | D | 1 | 20210522 |
| EPI_ISL_19662195 | NSP3 | hCoV-19/Singapore/R66MQ36/2024 | L | 198 | R | 105 | 20241206 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | L | 198 | V | 7 | 20230217 |
| EPI_ISL_19812366 | NSP3 | hCoV-19/Germany/MV-RKI-I-1147928/2025 | L | 198 | I | 233 | 20250306 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | L | 198 | T | 4 | 20220804 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | L | 198 | S | 5 | 20231007 |
| EPI_ISL_19512737 | NSP3 | hCoV-19/Singapore/R58MQ62/2024 | L | 198 | J | 13 | 20241023 |
| EPI_ISL_18226341 | NSP3 | hCoV-19/env/India/MH-FMR_D3-54a/2023 | L | 198 | K | 5 | 20230313 |
| EPI_ISL_8130444 | NSP3 | hCoV-19/Turkey/HSGM-F10723/2021 | L | 198 | insNINR | 2 | 20211220 |
| EPI_ISL_17530288 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14029/2023 | L | 198 | E | 4 | 20230407 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | T | 199 | L | 7 | 20230425 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | T | 199 | E | 2 | 20211122 |
| EPI_ISL_19143509 | NSP3 | hCoV-19/Pakistan/GRH42662/2024 | T | 199 | S | 10 | 20240320 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | T | 199 | F | 1 | 20230403 |
| EPI_ISL_18998732 | NSP3 | hCoV-19/Canada/NS-NSH-704506/2024 | T | 199 | R | 13 | 20240305 |
| EPI_ISL_16900655 | NSP3 | hCoV-19/South Korea/KDCA205624/2023 | T | 199 | P | 20 | 20230115 |
| EPI_ISL_10831668 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83755/2022 | T | 199 | Y | 4 | 20220120 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | T | 199 | C | 1 | 20221119 |
| EPI_ISL_19802563 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11005/2025 | T | 199 | A | 664 | 20250228 |
| EPI_ISL_17530288 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14029/2023 | T | 199 | Q | 5 | 20230407 |
| EPI_ISL_11887733 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0695/2021 | T | 199 | M | 1 | 20211228 |
| EPI_ISL_17500711 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13654/2023 | T | 199 | N | 5 | 20230321 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | T | 199 | G | 1 | 20230412 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | T | 199 | W | 1 | 20220602 |
| EPI_ISL_19819601 | NSP3 | hCoV-19/Australia/SA2511308/2025 | T | 199 | I | 3421 | 20250328 |
| EPI_ISL_19334598 | NSP3 | hCoV-19/Egypt/CPHL-EGY24137/2024 | T | 199 | K | 190 | 20240624 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | T | 199 | V | 2 | 20230415 |
| EPI_ISL_13394207 | NSP3 | hCoV-19/USA/WI-UW-11725/2022 | T | 199 | H | 6 | 20220610 |
| EPI_ISL_14038145 | NSP3 | hCoV-19/Chile/RM-86893/2022 | T | 199 | D | 2 | 20220712 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | T | 199 | del | 888 | 20250322 |
| EPI_ISL_19752836 | NSP3 | hCoV-19/Brazil/AC-IEC-002381/2025 | P | 200 | Q | 109 | 20250104 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | P | 200 | H | 1 | 20200608 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 200 | K | 1 | 20220210 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | P | 200 | Y | 1 | 20220811 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | P | 200 | F | 2 | 20230412 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | P | 200 | del | 906 | 20250322 |
| EPI_ISL_16258482 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2062/2022 | P | 200 | D | 1 | 20220730 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | P | 200 | N | 3 | 20220602 |
| EPI_ISL_16612019 | NSP3 | hCoV-19/Italy/SIC-CQRC-3422073193/2022 | P | 200 | R | 2 | 20221228 |
| EPI_ISL_19823425 | NSP3 | hCoV-19/Japan/FR021-0261/2025 | P | 200 | L | 4366 | 20250306 |
| EPI_ISL_18255167 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-19/2023 | P | 200 | stop | 12 | 20230419 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | P | 200 | V | 2 | 20220205 |
| EPI_ISL_19069405 | NSP3 | hCoV-19/Australia/QLD0x0142F4/2024 | P | 200 | A | 6 | 20240403 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | P | 200 | G | 1 | 20210804 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | P | 200 | E | 1 | 20211122 |
| EPI_ISL_19143509 | NSP3 | hCoV-19/Pakistan/GRH42662/2024 | P | 200 | C | 3 | 20240320 |
| EPI_ISL_19712374 | NSP3 | hCoV-19/France/PAC-RELAB-HCL725000018901/2025 | P | 200 | T | 388 | 20250116 |
| EPI_ISL_19762723 | NSP3 | hCoV-19/Chile/AI-ISPC-14933/2025 | P | 200 | S | 6406 | 20250216 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | P | 200 | insLKstop | 2 | 20210818 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | P | 200 | I | 1 | 20220804 |
| EPI_ISL_2603416 | NSP3 | hCoV-19/France/ARA-CHUGA-1065843103/2021 | P | 200 | W | 1 | 20210608 |
| EPI_ISL_19758364 | NSP3 | hCoV-19/USA/UT-USAFSAM-S23325/2025 | V | 201 | I | 428 | 20250203 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | V | 201 | Q | 3 | 20230217 |
| EPI_ISL_14394397 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-006149/2022 | V | 201 | D | 7 | 20220727 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | V | 201 | insKstop | 1 | 20210803 |
| EPI_ISL_19527499 | NSP3 | hCoV-19/Spain/CT-HCB-4272/2024 | V | 201 | G | 37 | 20240904 |
| EPI_ISL_19485203 | NSP3 | hCoV-19/Luxembourg/LNS4683963/2024 | V | 201 | L | 22 | 20240911 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | V | 201 | K | 1 | 20210522 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | V | 201 | S | 10 | 20230425 |
| EPI_ISL_19786208 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12602-P0/2025 | V | 201 | F | 1296 | 20250224 |
| EPI_ISL_19683643 | NSP3 | hCoV-19/Spain/CB-HUMV-8802201/2025 | V | 201 | A | 137 | 20250106 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | V | 201 | N | 3 | 20230403 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 201 | M | 1 | 20220210 |
| EPI_ISL_8049925 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6812/2021 | V | 201 | C | 4 | 20211007 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | V | 201 | del | 832 | 20250322 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | V | 201 | insLSAGDPIHSLRVC | 1 | 20221118 |
| EPI_ISL_19143509 | NSP3 | hCoV-19/Pakistan/GRH42662/2024 | V | 201 | T | 8 | 20240320 |
| EPI_ISL_18263496 | NSP3 | hCoV-19/Morocco/INH-4999/2021 | V | 201 | R | 1 | 20210524 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 201 | E | 1 | 20220210 |
| EPI_ISL_16909396 | NSP3 | hCoV-19/USA/CO-CDPHE-2103777077/2023 | V | 202 | D | 9 | 20230130 |
| EPI_ISL_19773608 | NSP3 | hCoV-19/USA/CA-CDPH-500145767/2025 | V | 202 | F | 830 | 20250114 |
| EPI_ISL_19143509 | NSP3 | hCoV-19/Pakistan/GRH42662/2024 | V | 202 | Q | 2 | 20240320 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | V | 202 | W | 1 | 20210201 |
| EPI_ISL_10563929 | NSP3 | hCoV-19/Thailand/NIC_CMI_SEQ3945/2022 | V | 202 | B | 1 | 20220110 |
| EPI_ISL_8951849 | NSP3 | hCoV-19/USA/CO-CDC-MMB12421187/2021 | V | 202 | insHQW | 1 | 20211224 |
| EPI_ISL_19409520 | NSP3 | hCoV-19/Hubei/HCDC-JZ6979/2024 | V | 202 | L | 13 | 20240826 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | V | 202 | H | 1 | 20220602 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | V | 202 | insC | 1 | 20210805 |
| EPI_ISL_10523144 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-9810/2022 | V | 202 | R | 1 | 20220208 |
| EPI_ISL_19767033 | NSP3 | hCoV-19/Canada/SK-RRPL-768697/2025 | V | 202 | A | 403 | 20250205 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | V | 202 | insDstopYstop | 1 | 20200729 |
| EPI_ISL_18255171 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-22/2023 | V | 202 | stop | 2 | 20230403 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | V | 202 | N | 2 | 20230412 |
| EPI_ISL_12471217 | NSP3 | hCoV-19/USA/ID-IBL-814757/2022 | V | 202 | C | 7 | 20220419 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | V | 202 | del | 850 | 20250322 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | V | 202 | T | 5 | 20221118 |
| EPI_ISL_19824388 | NSP3 | hCoV-19/Mexico/CMX-INER-INMEGEN-3218/2025 | V | 202 | I | 1860 | 20250326 |
| EPI_ISL_11333352 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-38/2022 | V | 202 | P | 1 | 20220208 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | V | 202 | S | 2 | 20220811 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 202 | E | 1 | 20220210 |
| EPI_ISL_19702037 | NSP3 | hCoV-19/Canada/ON-PHL-202502486/2025 | V | 202 | G | 17 | 20250121 |
| EPI_ISL_15542528 | NSP3 | hCoV-19/Sweden/03_SE600_500000168872SP/2022 | Q | 203 | stop | 82 | 20221022 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | Q | 203 | F | 1 | 20220811 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | Q | 203 | I | 3 | 20230425 |
| EPI_ISL_18800766 | NSP3 | hCoV-19/England/CLIMB-CM7YF1PP/2024 | Q | 203 | P | 40 | 20240113 |
| EPI_ISL_19266934 | NSP3 | hCoV-19/Henan/PYCDC-XG0167/2024 | Q | 203 | L | 195 | 20240519 |
| EPI_ISL_13178977 | NSP3 | hCoV-19/Germany/BY-LGL-IMS-10272-CVDP-563ed465-1807-404f-981d-36b6a2099694/2022 | Q | 203 | Z | 1 | 20220501 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | Q | 203 | S | 8 | 20231007 |
| EPI_ISL_18750697 | NSP3 | hCoV-19/USA/MN-MDH-39513/2023 | Q | 203 | K | 90 | 20231226 |
| EPI_ISL_19827089 | NSP3 | hCoV-19/Chile/AP-ISPC-25227/2025 | Q | 203 | R | 1074 | 20250318 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | Q | 203 | G | 2 | 20211019 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | Q | 203 | N | 3 | 20220801 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | Q | 203 | T | 2 | 20220804 |
| EPI_ISL_19683435 | NSP3 | hCoV-19/Canada/AB-ABPHL-130281/2025 | Q | 203 | E | 120 | 20250103 |
| EPI_ISL_15005651 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1112/2021 | Q | 203 | C | 1 | 20211009 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | Q | 203 | del | 696 | 20250322 |
| EPI_ISL_12448686 | NSP3 | hCoV-19/Luxembourg/LNS2918668/2022 | Q | 203 | insDG | 1 | 20220225 |
| EPI_ISL_19803441 | NSP3 | hCoV-19/USA/WI-WSLH-2500942/2025 | Q | 203 | H | 2860 | 20250226 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | Q | 203 | D | 2 | 20221118 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | Q | 203 | V | 2 | 20230412 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | Q | 203 | Y | 2 | 20210522 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | Q | 203 | A | 1 | 20210803 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | T | 204 | Q | 1 | 20220804 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | T | 204 | D | 6 | 20231007 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | T | 204 | K | 2 | 20220801 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | T | 204 | Y | 1 | 20220630 |
| EPI_ISL_17730368 | NSP3 | hCoV-19/South Korea/KDCA238201/2023 | T | 204 | S | 11 | 20230510 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | T | 204 | insA | 1 | 20230217 |
| EPI_ISL_19434282 | NSP3 | hCoV-19/Australia/SA1947229/2024 | T | 204 | N | 226 | 20240905 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | T | 204 | insETDLstop | 1 | 20230217 |
| EPI_ISL_922221 | NSP3 | hCoV-19/England/OXON-F506E2/2021 | T | 204 | insI | 1 | 20210110 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | T | 204 | M | 1 | 20230217 |
| EPI_ISL_16282441 | NSP3 | hCoV-19/Canary Islands/HUGCDN-01620027/2022 | T | 204 | V | 10 | 20221112 |
| EPI_ISL_18566503 | NSP3 | hCoV-19/Australia/NSW-ICPMR-51420/2023 | T | 204 | P | 801 | 20231114 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | T | 204 | G | 2 | 20230217 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | T | 204 | L | 67 | 20230415 |
| EPI_ISL_19512429 | NSP3 | hCoV-19/Japan/FR004-0502/2024 | T | 204 | A | 524 | 20241015 |
| EPI_ISL_11336335 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0531/2021 | T | 204 | H | 4 | 20211218 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | T | 204 | E | 1 | 20230412 |
| EPI_ISL_19760387 | NSP3 | hCoV-19/USA/NJ-CDC-LC1133181/2025 | T | 204 | del | 697 | 20250219 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 204 | F | 1 | 20220210 |
| EPI_ISL_19826301 | NSP3 | hCoV-19/Canada/ON-HSC-202501571-v1/2025 | T | 204 | I | 9748 | 20250329 |
| EPI_ISL_3796463 | NSP3 | hCoV-19/Sweden/101504536/2021 | T | 204 | R | 1 | 20210329 |
| EPI_ISL_19818746 | NSP3 | hCoV-19/Italy/LOM-UNIBS-03123141/2025 | I | 205 | T | 703 | 20250312 |
| EPI_ISL_19239385 | NSP3 | hCoV-19/Wales/CLIMB-CM7YGRGH/2024 | I | 205 | M | 51 | 20240617 |
| EPI_ISL_2370880 | NSP3 | hCoV-19/Greece/196399/2021 | I | 205 | insV | 1 | 20210501 |
| EPI_ISL_3796463 | NSP3 | hCoV-19/Sweden/101504536/2021 | I | 205 | W | 1 | 20210329 |
| EPI_ISL_18371168 | NSP3 | hCoV-19/Turkey/HSGM-AA00614/2023 | I | 205 | L | 85 | 20230913 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | I | 205 | A | 1 | 20221118 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | I | 205 | F | 14 | 20230415 |
| EPI_ISL_19572367 | NSP3 | hCoV-19/USA/UT-UM-G56Z68O1/2024 | I | 205 | S | 97 | 20241009 |
| EPI_ISL_10831668 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83755/2022 | I | 205 | Y | 5 | 20220120 |
| EPI_ISL_19780515 | NSP3 | hCoV-19/USA/NY-NYULH-22343/2025 | I | 205 | V | 676 | 20250303 |
| EPI_ISL_18553779 | NSP3 | hCoV-19/USA/NJ-GBW-H10-018-0300/2023 | I | 205 | N | 14 | 20231117 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | I | 205 | R | 1 | 20210201 |
| EPI_ISL_19827122 | NSP3 | hCoV-19/Chile/LR-ISPC-26731/2025 | I | 205 | del | 2073 | 20250325 |
| EPI_ISL_18371116 | NSP3 | hCoV-19/Turkey/HSGM-AA00548/2023 | I | 205 | J | 35 | 20230828 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | I | 205 | P | 1 | 20200608 |
| EPI_ISL_12448686 | NSP3 | hCoV-19/Luxembourg/LNS2918668/2022 | I | 205 | E | 2 | 20220225 |
| EPI_ISL_18936176 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00152/2023 | I | 205 | stop | 2 | 20230420 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | I | 205 | K | 3 | 20211019 |
| EPI_ISL_18226341 | NSP3 | hCoV-19/env/India/MH-FMR_D3-54a/2023 | E | 206 | R | 51 | 20230313 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | E | 206 | N | 8 | 20230415 |
| EPI_ISL_19816888 | NSP3 | hCoV-19/Norway/4651/2025 | E | 206 | del | 2962 | 20250318 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | E | 206 | H | 1 | 20200608 |
| EPI_ISL_19174762 | NSP3 | hCoV-19/Henan/SMXCDC-XGCX063/2024 | E | 206 | Q | 14 | 20240422 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | E | 206 | L | 5 | 20220801 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | E | 206 | Y | 1 | 20211104 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | E | 206 | T | 1 | 20230412 |
| EPI_ISL_13246406 | NSP3 | hCoV-19/Germany/RP-RKI-I-851445/2022 | E | 206 | insGTQQP | 3 | 20220526 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 206 | W | 1 | 20211006 |
| EPI_ISL_19687578 | NSP3 | hCoV-19/USA/NY-PRL-250114_82E10/2025 | E | 206 | D | 594 | 20250107 |
| EPI_ISL_18505842 | NSP3 | hCoV-19/Xinjiang/XJCDCKS-246/2023 | E | 206 | V | 29 | 20231009 |
| EPI_ISL_13822609 | NSP3 | hCoV-19/Italy/PIE_IRCC_15885191/2022 | E | 206 | insEPSSR | 35 | 20220705 |
| EPI_ISL_18473653 | NSP3 | hCoV-19/Singapore/R80MR135/2023 | E | 206 | Z | 10 | 20231030 |
| EPI_ISL_19804467 | NSP3 | hCoV-19/USA/VA-VCUVAS3-YQCT311205/2025 | E | 206 | G | 396 | 20250315 |
| EPI_ISL_19827122 | NSP3 | hCoV-19/Chile/LR-ISPC-26731/2025 | E | 206 | K | 1067 | 20250325 |
| EPI_ISL_19480544 | NSP3 | hCoV-19/USA/NY-UM-L5721752399271/2024 | E | 206 | A | 140 | 20240820 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | E | 206 | F | 1 | 20210522 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 206 | S | 2 | 20220210 |
| EPI_ISL_10083919 | NSP3 | hCoV-19/Iran/Tehran-NIC-32/2022 | E | 206 | stop | 13 | 20220129 |
| EPI_ISL_16282441 | NSP3 | hCoV-19/Canary Islands/HUGCDN-01620027/2022 | E | 206 | I | 10 | 20221112 |
| EPI_ISL_17849620 | NSP3 | hCoV-19/Australia/SA543314/2023 | V | 207 | T | 3 | 20230614 |
| EPI_ISL_19828185 | NSP3 | hCoV-19/Australia/QLD0x0154DF/2025 | V | 207 | A | 8485 | 20250402 |
| EPI_ISL_19766344 | NSP3 | hCoV-19/Brazil/PA-IEC-25-004768/2024 | V | 207 | M | 391 | 20241231 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | V | 207 | Y | 2 | 20211019 |
| EPI_ISL_19736007 | NSP3 | hCoV-19/Spain/CT-BST-910115006/2025 | V | 207 | L | 2184 | 20250121 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | V | 207 | Q | 7 | 20230412 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | V | 207 | insIstop | 1 | 20211102 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | V | 207 | insstop | 1 | 20220602 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | V | 207 | I | 11 | 20231007 |
| EPI_ISL_14506033 | NSP3 | hCoV-19/USA/NY-NYULH8013/2022 | V | 207 | insGA | 1 | 20220801 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | V | 207 | N | 1 | 20221118 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | V | 207 | E | 6 | 20220811 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | V | 207 | H | 1 | 20220602 |
| EPI_ISL_10831668 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83755/2022 | V | 207 | S | 8 | 20220120 |
| EPI_ISL_19816888 | NSP3 | hCoV-19/Norway/4651/2025 | V | 207 | del | 2925 | 20250318 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | V | 207 | K | 4 | 20230425 |
| EPI_ISL_17530288 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14029/2023 | V | 207 | stop | 17 | 20230407 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | V | 207 | insstopGQSD | 1 | 20210201 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | V | 207 | G | 17 | 20240627 |
| EPI_ISL_6762735 | NSP3 | hCoV-19/England/PLYM-2B34697/2021 | V | 207 | F | 45 | 20211118 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | V | 207 | insK | 1 | 20230415 |
| EPI_ISL_19140722 | NSP3 | hCoV-19/Pakistan/CHL30086/2023 | N | 208 | E | 9 | 20230823 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | N | 208 | M | 1 | 20220210 |
| EPI_ISL_19515721 | NSP3 | hCoV-19/Japan/FR050-0344/2024 | N | 208 | T | 947 | 20241010 |
| EPI_ISL_18305788 | NSP3 | hCoV-19/Germany/BY-LGL-5997071/2023 | N | 208 | L | 7 | 20230830 |
| EPI_ISL_19725323 | NSP3 | hCoV-19/Spain/PV-HUD-39316752/2025 | N | 208 | del | 2122 | 20250209 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | N | 208 | stop | 3 | 20220630 |
| EPI_ISL_18818085 | NSP3 | hCoV-19/USA/CA-HLX-STM-2U5T7BEF3/2023 | N | 208 | H | 628 | 20231221 |
| EPI_ISL_19778696 | NSP3 | hCoV-19/USA/CA-PFZ04671/2025 | N | 208 | S | 419 | 20250216 |
| EPI_ISL_18564301 | NSP3 | hCoV-19/Sichuan/NJCDC-1123-3/2023 | N | 208 | K | 41 | 20231114 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | N | 208 | Q | 5 | 20230425 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | N | 208 | insLNstopRWNLH | 42 | 20210419 |
| EPI_ISL_19228164 | NSP3 | hCoV-19/Singapore/R37MQ49/2024 | N | 208 | B | 12 | 20240603 |
| EPI_ISL_15688612 | NSP3 | hCoV-19/Chile/AT-121802/2022 | N | 208 | G | 5 | 20221020 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | N | 208 | I | 14 | 20220811 |
| EPI_ISL_19339975 | NSP3 | hCoV-19/Canada/AB-ABPHL-121082/2024 | N | 208 | Y | 46 | 20240725 |
| EPI_ISL_19817921 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U825-1/2025 | N | 208 | D | 247 | 20250312 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | N | 208 | V | 4 | 20230412 |
| EPI_ISL_19474797 | NSP3 | hCoV-19/Russia/BA-RII-MH201557S/2024 | S | 209 | G | 735 | 20240917 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | S | 209 | D | 3 | 20230217 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | S | 209 | V | 12 | 20230412 |
| EPI_ISL_2370880 | NSP3 | hCoV-19/Greece/196399/2021 | S | 209 | P | 2 | 20210501 |
| EPI_ISL_19810382 | NSP3 | hCoV-19/Singapore/Y25R13MSC14/2025 | S | 209 | I | 286 | 20250320 |
| EPI_ISL_19573762 | NSP3 | hCoV-19/Canada/NS-NSH-751206/2024 | S | 209 | del | 1412 | 20241025 |
| EPI_ISL_19133226 | NSP3 | hCoV-19/Brazil/SP-IAL-357683220/2024 | S | 209 | R | 273 | 20240416 |
| EPI_ISL_18305788 | NSP3 | hCoV-19/Germany/BY-LGL-5997071/2023 | S | 209 | K | 6 | 20230830 |
| EPI_ISL_19140722 | NSP3 | hCoV-19/Pakistan/CHL30086/2023 | S | 209 | L | 16 | 20230823 |
| EPI_ISL_7493998 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081421-992/2021 | S | 209 | insstopWL | 1 | 20210814 |
| EPI_ISL_16401555 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1126/2022 | S | 209 | A | 2 | 20221119 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | S | 209 | stop | 8 | 20220630 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | S | 209 | Y | 1 | 20210201 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | S | 209 | E | 6 | 20230425 |
| EPI_ISL_19739929 | NSP3 | hCoV-19/Canada/MB-CPL-763136/2024 | S | 209 | N | 596 | 20241007 |
| EPI_ISL_19748201 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00021388_01/2024 | S | 209 | C | 51 | 20240622 |
| EPI_ISL_18077674 | NSP3 | hCoV-19/Malaysia/IMR_LF04276/2023 | S | 209 | T | 38 | 20230726 |
| EPI_ISL_18540582 | NSP3 | hCoV-19/Germany/BY-MVP-000022390/2023 | F | 210 | L | 599 | 20231109 |
| EPI_ISL_19573762 | NSP3 | hCoV-19/Canada/NS-NSH-751206/2024 | F | 210 | I | 218 | 20241025 |
| EPI_ISL_19133226 | NSP3 | hCoV-19/Brazil/SP-IAL-357683220/2024 | F | 210 | N | 15 | 20240416 |
| EPI_ISL_19069308 | NSP3 | hCoV-19/Japan/FR050-0052/2024 | F | 210 | Y | 34 | 20240409 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | F | 210 | stop | 1 | 20220602 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | F | 210 | P | 1 | 20230412 |
| EPI_ISL_7508606 | NSP3 | hCoV-19/USA/CA-CSMC410/2020 | F | 210 | insstopG | 1 | 20200803 |
| EPI_ISL_19140722 | NSP3 | hCoV-19/Pakistan/CHL30086/2023 | F | 210 | Q | 3 | 20230823 |
| EPI_ISL_18142189 | NSP3 | hCoV-19/Portugal/PT49242/2023 | F | 210 | C | 77 | 20230806 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | F | 210 | del | 1461 | 20240812 |
| EPI_ISL_19040572 | NSP3 | hCoV-19/USA/CA-CDPH-500135220/2024 | F | 210 | V | 63 | 20240218 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | F | 210 | D | 3 | 20220804 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | F | 210 | A | 2 | 20211019 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | F | 210 | E | 1 | 20210522 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | F | 210 | W | 2 | 20230217 |
| EPI_ISL_19769634 | NSP3 | hCoV-19/USA/OR-OHSU-241580335/2023 | F | 210 | S | 18 | 20231014 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | F | 210 | T | 1 | 20230217 |
| EPI_ISL_13282071 | NSP3 | hCoV-19/USA/ID-IBL-656837/2020 | F | 210 | G | 1 | 20200915 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 211 | H | 1 | 20210318 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | S | 211 | V | 6 | 20220811 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | S | 211 | insNNCstop | 1 | 20210201 |
| EPI_ISL_18226341 | NSP3 | hCoV-19/env/India/MH-FMR_D3-54a/2023 | S | 211 | K | 11 | 20230313 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | S | 211 | Q | 3 | 20240315 |
| EPI_ISL_19722183 | NSP3 | hCoV-19/USA/CA-PFZ04134/2025 | S | 211 | N | 884 | 20250122 |
| EPI_ISL_10831668 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83755/2022 | S | 211 | stop | 9 | 20220120 |
| EPI_ISL_18546508 | NSP3 | hCoV-19/USA/TX-HMH-M-135158/2023 | S | 211 | Y | 4 | 20231027 |
| EPI_ISL_19488262 | NSP3 | hCoV-19/France/BFC-RELAB-IPP11049/2024 | S | 211 | I | 549 | 20240916 |
| EPI_ISL_18561702 | NSP3 | hCoV-19/New Zealand/23ZA6345/2023 | S | 211 | T | 36 | 20231120 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | S | 211 | E | 3 | 20230217 |
| EPI_ISL_19799979 | NSP3 | hCoV-19/USA/TX-HMH-M-147334/2025 | S | 211 | R | 61 | 20250128 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | S | 211 | del | 360 | 20240812 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | S | 211 | L | 4 | 20230425 |
| EPI_ISL_19765203 | NSP3 | hCoV-19/USA/NY-PRL-250225_81B03/2025 | S | 211 | G | 4571 | 20250214 |
| EPI_ISL_19385841 | NSP3 | hCoV-19/Brazil/BA-LACEN-293859027/2024 | S | 211 | C | 263 | 20240807 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | S | 211 | F | 2 | 20220602 |
| EPI_ISL_19140722 | NSP3 | hCoV-19/Pakistan/CHL30086/2023 | S | 211 | P | 1 | 20230823 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | S | 211 | A | 4 | 20221227 |
| EPI_ISL_19212801 | NSP3 | hCoV-19/env/India/MH-NCL-224-12/2023 | G | 212 | V | 104 | 20231212 |
| EPI_ISL_19822502 | NSP3 | hCoV-19/Australia/QLD0x015487/2025 | G | 212 | S | 285 | 20250323 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | G | 212 | insENLLL | 1 | 20211122 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | G | 212 | K | 6 | 20230217 |
| EPI_ISL_17695131 | NSP3 | hCoV-19/Slovenia/23-013148-MB/2023 | G | 212 | A | 5 | 20230503 |
| EPI_ISL_18226341 | NSP3 | hCoV-19/env/India/MH-FMR_D3-54a/2023 | G | 212 | Q | 6 | 20230313 |
| EPI_ISL_19691215 | NSP3 | hCoV-19/France/IDF-RELAB-IPP00119/2024 | G | 212 | C | 92 | 20241218 |
| EPI_ISL_17766973 | NSP3 | hCoV-19/Morocco/INH-256813/2021 | G | 212 | F | 1 | 20210101 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | G | 212 | I | 1 | 20230217 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | G | 212 | insL | 1 | 20200721 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | G | 212 | T | 4 | 20211122 |
| EPI_ISL_14454802 | NSP3 | hCoV-19/USA/TX-Curative-438963/2022 | G | 212 | insG | 2 | 20220731 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | G | 212 | L | 5 | 20230412 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | G | 212 | P | 1 | 20221118 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | G | 212 | stop | 3 | 20220602 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | G | 212 | N | 1 | 20211019 |
| EPI_ISL_19687686 | NSP3 | hCoV-19/USA/NY-PRL-250114_81D07/2024 | G | 212 | D | 482 | 20241223 |
| EPI_ISL_12658799 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121021-1272/2021 | G | 212 | W | 5 | 20211210 |
| EPI_ISL_17418019 | NSP3 | hCoV-19/Italy/LOM_ASSTMonza_6000229825_20230326123600/2023 | G | 212 | R | 16 | 20230326 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | G | 212 | del | 183 | 20240812 |
| EPI_ISL_16282441 | NSP3 | hCoV-19/Canary Islands/HUGCDN-01620027/2022 | G | 212 | M | 7 | 20221112 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | Y | 213 | G | 1 | 20210803 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | Y | 213 | insstopSEstopFstopWL | 43 | 20210419 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Y | 213 | P | 2 | 20221229 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | Y | 213 | V | 3 | 20211019 |
| EPI_ISL_18226341 | NSP3 | hCoV-19/env/India/MH-FMR_D3-54a/2023 | Y | 213 | L | 13 | 20230313 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | Y | 213 | Q | 1 | 20210522 |
| EPI_ISL_19289803 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBD35051/2024 | Y | 213 | stop | 4 | 20240717 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | Y | 213 | I | 5 | 20220117 |
| EPI_ISL_16282441 | NSP3 | hCoV-19/Canary Islands/HUGCDN-01620027/2022 | Y | 213 | insT | 2 | 20221112 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | Y | 213 | F | 53 | 20231007 |
| EPI_ISL_17346207 | NSP3 | hCoV-19/France/GES-IPP07304/2023 | Y | 213 | C | 25 | 20230313 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Y | 213 | S | 6 | 20220210 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | Y | 213 | K | 4 | 20221217 |
| EPI_ISL_19280857 | NSP3 | hCoV-19/Spain/MD-HULP-200147626/2024 | Y | 213 | H | 5 | 20240701 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | Y | 213 | del | 84 | 20240812 |
| EPI_ISL_642267 | NSP3 | hCoV-19/England/QEUH-B1172A/2020 | Y | 213 | insY | 1 | 20201102 |
| EPI_ISL_15688612 | NSP3 | hCoV-19/Chile/AT-121802/2022 | Y | 213 | A | 2 | 20221020 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | Y | 213 | N | 4 | 20221227 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | Y | 213 | W | 3 | 20220602 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | Y | 213 | E | 3 | 20230412 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | Y | 213 | T | 3 | 20230425 |
| EPI_ISL_12754235 | NSP3 | hCoV-19/USA/MS-MSPHL-94/2021 | L | 214 | insN | 1 | 20210714 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 214 | K | 3 | 20220210 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | L | 214 | C | 2 | 20230217 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | L | 214 | T | 9 | 20220811 |
| EPI_ISL_15574155 | NSP3 | hCoV-19/Luxembourg/LNS7753508/2022 | L | 214 | I | 11 | 20221018 |
| EPI_ISL_19363988 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14093/2024 | L | 214 | S | 32 | 20240410 |
| EPI_ISL_16453608 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-121831/2022 | L | 214 | stop | 22 | 20221231 |
| EPI_ISL_19536025 | NSP3 | hCoV-19/env/Germany/BY-LGL-6386977/2024 | L | 214 | F | 81 | 20241016 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 214 | G | 1 | 20221229 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | L | 214 | del | 58 | 20240812 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | L | 214 | M | 4 | 20230412 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | L | 214 | V | 62 | 20230425 |
| EPI_ISL_12610866 | NSP3 | hCoV-19/Turkey/HSGM-G8656/2022 | L | 214 | W | 1 | 20220407 |
| EPI_ISL_3085218 | NSP3 | hCoV-19/Italy/UMB-ISS-7092/2021 | L | 214 | J | 2 | 20210210 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | K | 215 | A | 2 | 20230217 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | K | 215 | Y | 4 | 20220630 |
| EPI_ISL_12582757 | NSP3 | hCoV-19/Turkey/HSGM-GS2109/2022 | K | 215 | G | 1 | 20220401 |
| EPI_ISL_19635627 | NSP3 | hCoV-19/Japan/FR035-0390/2024 | K | 215 | T | 46 | 20240822 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | K | 215 | S | 7 | 20230425 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | K | 215 | L | 7 | 20230217 |
| EPI_ISL_12146185 | NSP3 | hCoV-19/Turkey/HSGM-GS1499/2022 | K | 215 | D | 4 | 20220401 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | K | 215 | V | 4 | 20221227 |
| EPI_ISL_14730165 | NSP3 | hCoV-19/Russia/MOW-CRIE-7769164090/2022 | K | 215 | stop | 7 | 20220815 |
| EPI_ISL_18797208 | NSP3 | hCoV-19/USA/CA-SC-282416/2023 | K | 215 | Q | 37 | 20231208 |
| EPI_ISL_12319890 | NSP3 | hCoV-19/Turkey/HSGM-GS1843/2022 | K | 215 | C | 1 | 20220401 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | K | 215 | del | 63 | 20240812 |
| EPI_ISL_18520159 | NSP3 | hCoV-19/Netherlands/NB-MVD-2300582/2023 | K | 215 | I | 6 | 20231112 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | K | 215 | F | 2 | 20220602 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | K | 215 | insN | 2 | 20210813 |
| EPI_ISL_19273169 | NSP3 | hCoV-19/USA/IL-RIPHL_123134_G/2024 | K | 215 | E | 103 | 20240623 |
| EPI_ISL_19525274 | NSP3 | hCoV-19/USA/HI-H2331278/2024 | K | 215 | N | 234 | 20241007 |
| EPI_ISL_19796122 | NSP3 | hCoV-19/Australia/SA2475504/2025 | K | 215 | R | 145 | 20250305 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | L | 216 | K | 6 | 20221118 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | L | 216 | G | 1 | 20210803 |
| EPI_ISL_19134093 | NSP3 | hCoV-19/env/Germany/BY-LGL-6219837/2024 | L | 216 | P | 14 | 20240417 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | L | 216 | R | 3 | 20221217 |
| EPI_ISL_19181306 | NSP3 | hCoV-19/Singapore/R32MQ74/2024 | L | 216 | J | 3 | 20240527 |
| EPI_ISL_19560676 | NSP3 | hCoV-19/Brazil/SP-IAL-357976770/2024 | L | 216 | V | 35 | 20241002 |
| EPI_ISL_19258801 | NSP3 | hCoV-19/England/CLIMB-CM7YJ55Z/2024 | L | 216 | I | 146 | 20240617 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 216 | Y | 8 | 20230217 |
| EPI_ISL_18840365 | NSP3 | hCoV-19/USA/ID-IBL-907123/2024 | L | 216 | T | 55 | 20240109 |
| EPI_ISL_7493998 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081421-992/2021 | L | 216 | C | 4 | 20210814 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | L | 216 | del | 73 | 20240812 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | L | 216 | W | 3 | 20230425 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | L | 216 | H | 2 | 20230217 |
| EPI_ISL_19826528 | NSP3 | hCoV-19/USA/NY-PRL-250408_83D08/2025 | L | 216 | F | 3195 | 20250401 |
| EPI_ISL_12754235 | NSP3 | hCoV-19/USA/MS-MSPHL-94/2021 | L | 216 | A | 1 | 20210714 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | L | 216 | S | 1 | 20200923 |
| EPI_ISL_3161300 | NSP3 | hCoV-19/USA/LA-OD-2970156/2021 | L | 216 | D | 1 | 20210707 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | L | 216 | E | 1 | 20220811 |
| EPI_ISL_17815166 | NSP3 | hCoV-19/USA/MI-UM-L365310291/2023 | L | 216 | M | 4 | 20230513 |
| EPI_ISL_17427522 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2880/2023 | T | 217 | L | 26 | 20230401 |
| EPI_ISL_18881763 | NSP3 | hCoV-19/England/CLIMB-CM7YFHFF/2024 | T | 217 | A | 154 | 20240129 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | T | 217 | insR | 1 | 20230217 |
| EPI_ISL_19819937 | NSP3 | hCoV-19/Canada/ON-HRL-20251019505334-v1/2025 | T | 217 | I | 4489 | 20250319 |
| EPI_ISL_19693086 | NSP3 | hCoV-19/USA/DE-DHSS-843/2025 | T | 217 | N | 148 | 20250108 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | T | 217 | F | 5 | 20221118 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | T | 217 | K | 2 | 20231007 |
| EPI_ISL_18840365 | NSP3 | hCoV-19/USA/ID-IBL-907123/2024 | T | 217 | Y | 51 | 20240109 |
| EPI_ISL_19560656 | NSP3 | hCoV-19/Brazil/SP-IAL-357940936/2024 | T | 217 | S | 20 | 20240911 |
| EPI_ISL_1039254 | NSP3 | hCoV-19/Belgium/UZA-UA-CV0615052041/2021 | T | 217 | H | 1 | 20210121 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 217 | V | 1 | 20220210 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | T | 217 | del | 85 | 20240812 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | T | 217 | M | 5 | 20230217 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | T | 217 | P | 3 | 20211019 |
| EPI_ISL_16946511 | NSP3 | hCoV-19/USA/ID-IBL-873722/2023 | T | 217 | stop | 8 | 20230118 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 217 | E | 1 | 20210318 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 217 | D | 6 | 20220210 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | T | 217 | R | 3 | 20211104 |
| EPI_ISL_16946511 | NSP3 | hCoV-19/USA/ID-IBL-873722/2023 | D | 218 | Q | 10 | 20230118 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | D | 218 | F | 1 | 20210803 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | D | 218 | insK | 1 | 20221118 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | D | 218 | del | 79 | 20240812 |
| EPI_ISL_17427522 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2880/2023 | D | 218 | T | 27 | 20230401 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | D | 218 | I | 1 | 20221229 |
| EPI_ISL_19008574 | NSP3 | hCoV-19/Netherlands/GE-RIVM-138221/2024 | D | 218 | A | 390 | 20240310 |
| EPI_ISL_19696824 | NSP3 | hCoV-19/Turkey/HSGM-AA000490/2024 | D | 218 | H | 12 | 20240702 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | D | 218 | S | 4 | 20230217 |
| EPI_ISL_19612499 | NSP3 | hCoV-19/France/BFC-RELAB-IPP13519/2024 | D | 218 | N | 499 | 20241120 |
| EPI_ISL_18978648 | NSP3 | hCoV-19/USA/NY-CDC-QDX93290973/2024 | D | 218 | G | 635 | 20240225 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | D | 218 | L | 8 | 20230425 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | D | 218 | R | 1 | 20200923 |
| EPI_ISL_19409691 | NSP3 | hCoV-19/France/COR-RELAB-HCL724000410501/2024 | D | 218 | Y | 263 | 20240814 |
| EPI_ISL_19795406 | NSP3 | hCoV-19/USA/NC-CDC-LC1135051/2025 | D | 218 | B | 16 | 20250317 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | D | 218 | P | 7 | 20230217 |
| EPI_ISL_19212862 | NSP3 | hCoV-19/env/India/MH-NCL-254-15/2024 | D | 218 | E | 2017 | 20240215 |
| EPI_ISL_18550562 | NSP3 | hCoV-19/USA/ID-IBL-902825/2023 | D | 218 | stop | 48 | 20231029 |
| EPI_ISL_16326723 | NSP3 | hCoV-19/USA/CA-CDPH-3000321012/2022 | D | 218 | V | 9 | 20220224 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | D | 218 | K | 2 | 20211019 |
| EPI_ISL_13306989 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3817/2022 | N | 219 | P | 1 | 20220503 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | N | 219 | L | 4 | 20230420 |
| EPI_ISL_18428666 | NSP3 | hCoV-19/Singapore/R75MR168/2023 | N | 219 | B | 8 | 20231014 |
| EPI_ISL_9196489 | NSP3 | hCoV-19/Nigeria/PHR-LA-029/2021 | N | 219 | I | 14 | 20211129 |
| EPI_ISL_19555175 | NSP3 | hCoV-19/Ukraine/89112/2024 | N | 219 | T | 167 | 20241021 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | N | 219 | insC | 1 | 20210802 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | N | 219 | Q | 50 | 20221217 |
| EPI_ISL_17440614 | NSP3 | hCoV-19/Italy/ABR-IZSGC-7094/2023 | N | 219 | K | 98 | 20230330 |
| EPI_ISL_18000684 | NSP3 | hCoV-19/Spain/AR-HCULB-00790204/2023 | N | 219 | D | 49 | 20230606 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | N | 219 | A | 1 | 20231007 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | N | 219 | V | 3 | 20221211 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | N | 219 | del | 77 | 20240812 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | N | 219 | H | 21 | 20230217 |
| EPI_ISL_19560676 | NSP3 | hCoV-19/Brazil/SP-IAL-357976770/2024 | N | 219 | Y | 145 | 20241002 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | N | 219 | E | 2 | 20221118 |
| EPI_ISL_13282071 | NSP3 | hCoV-19/USA/ID-IBL-656837/2020 | N | 219 | stop | 1 | 20200915 |
| EPI_ISL_19776559 | NSP3 | hCoV-19/Denmark/DCGC-691929/2025 | N | 219 | S | 439 | 20250217 |
| EPI_ISL_16946511 | NSP3 | hCoV-19/USA/ID-IBL-873722/2023 | N | 219 | C | 8 | 20230118 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | N | 219 | R | 3 | 20230425 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | N | 219 | G | 5 | 20240316 |
| EPI_ISL_18831497 | NSP3 | hCoV-19/Pakistan/DUHS-09/2024 | N | 219 | M | 34 | 20240114 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | V | 220 | T | 7 | 20240316 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | V | 220 | R | 1 | 20221126 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | V | 220 | K | 3 | 20230217 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | V | 220 | del | 86 | 20240812 |
| EPI_ISL_19389208 | NSP3 | hCoV-19/Ireland/G-GUH-N3037/2024 | V | 220 | I | 160 | 20240816 |
| EPI_ISL_19326640 | NSP3 | hCoV-19/Italy/LOM_IZSLER_4341_2_IZSLER/2024 | V | 220 | A | 133 | 20240709 |
| EPI_ISL_18831497 | NSP3 | hCoV-19/Pakistan/DUHS-09/2024 | V | 220 | P | 3 | 20240114 |
| EPI_ISL_12581352 | NSP3 | hCoV-19/Turkey/HSGM-GS2451/2022 | V | 220 | G | 2 | 20220405 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | V | 220 | M | 7 | 20230217 |
| EPI_ISL_11887726 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0688/2021 | V | 220 | S | 1 | 20211229 |
| EPI_ISL_14380930 | NSP3 | hCoV-19/Germany/BW-RKI-I-919277/2022 | V | 220 | insSG | 1 | 20220716 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | V | 220 | N | 3 | 20221211 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | V | 220 | E | 3 | 20230425 |
| EPI_ISL_19794746 | NSP3 | hCoV-19/Japan/FR044-0024/2025 | V | 220 | L | 43 | 20250204 |
| EPI_ISL_14770230 | NSP3 | hCoV-19/India/OR-ILSGS17429/2022 | V | 220 | C | 47 | 20220316 |
| EPI_ISL_17427522 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2880/2023 | V | 220 | Y | 36 | 20230401 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | V | 220 | Q | 3 | 20221217 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 220 | D | 2 | 20221229 |
| EPI_ISL_18226341 | NSP3 | hCoV-19/env/India/MH-FMR_D3-54a/2023 | V | 220 | stop | 4 | 20230313 |
| EPI_ISL_19758102 | NSP3 | hCoV-19/Singapore/Y25R9MSC23/2025 | Y | 221 | H | 1824 | 20250224 |
| EPI_ISL_19524716 | NSP3 | hCoV-19/Ireland/G-PUH-N3259/2024 | Y | 221 | N | 18 | 20241001 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | Y | 221 | R | 3 | 20220201 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | Y | 221 | I | 49 | 20221130 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | Y | 221 | K | 5 | 20221227 |
| EPI_ISL_1307673 | NSP3 | hCoV-19/Papua New Guinea/3/2021 | Y | 221 | F | 1 | 20210109 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | Y | 221 | insT | 2 | 20210804 |
| EPI_ISL_19807375 | NSP3 | hCoV-19/Canada/ON-PHL-202503945/2025 | Y | 221 | C | 274 | 20250212 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | Y | 221 | P | 1 | 20220811 |
| EPI_ISL_17427522 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2880/2023 | Y | 221 | T | 37 | 20230401 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Y | 221 | D | 2 | 20221229 |
| EPI_ISL_2795670 | NSP3 | hCoV-19/Italy/LAZ-INMI-1116/2021 | Y | 221 | Q | 4 | 20210609 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | Y | 221 | W | 6 | 20221217 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | Y | 221 | E | 3 | 20230412 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 221 | V | 3 | 20220210 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | Y | 221 | del | 80 | 20240812 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | Y | 221 | A | 3 | 20221211 |
| EPI_ISL_12559844 | NSP3 | hCoV-19/Indonesia/SS-NIHRD-WGS_22_04560/2022 | Y | 221 | stop | 2 | 20220305 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Y | 221 | G | 1 | 20230420 |
| EPI_ISL_13114412 | NSP3 | hCoV-19/USA/TX-HMH-M-98455/2022 | Y | 221 | S | 6 | 20220524 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | Y | 221 | M | 6 | 20230425 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | I | 222 | E | 2 | 20211006 |
| EPI_ISL_14770230 | NSP3 | hCoV-19/India/OR-ILSGS17429/2022 | I | 222 | H | 47 | 20220316 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | I | 222 | T | 22 | 20240316 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | I | 222 | P | 1 | 20211122 |
| EPI_ISL_19826908 | NSP3 | hCoV-19/USA/TN-SPHL-0143/2025 | I | 222 | V | 232 | 20250206 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | I | 222 | del | 76 | 20240812 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | I | 222 | D | 3 | 20221118 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | I | 222 | C | 2 | 20230217 |
| EPI_ISL_18550554 | NSP3 | hCoV-19/USA/ID-IBL-902790/2023 | I | 222 | L | 131 | 20231024 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | I | 222 | S | 6 | 20221229 |
| EPI_ISL_16946511 | NSP3 | hCoV-19/USA/ID-IBL-873722/2023 | I | 222 | stop | 10 | 20230118 |
| EPI_ISL_18831497 | NSP3 | hCoV-19/Pakistan/DUHS-09/2024 | I | 222 | K | 9 | 20240114 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | I | 222 | A | 4 | 20221211 |
| EPI_ISL_11887726 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0688/2021 | I | 222 | M | 1 | 20211229 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | I | 222 | W | 3 | 20220201 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | I | 222 | Q | 1 | 20220811 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | I | 222 | F | 12 | 20221217 |
| EPI_ISL_13282071 | NSP3 | hCoV-19/USA/ID-IBL-656837/2020 | I | 222 | R | 1 | 20200915 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | I | 222 | Y | 1 | 20210802 |
| EPI_ISL_15754211 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS_82876/2022 | I | 222 | J | 4 | 20220922 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | I | 222 | N | 2 | 20230420 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | K | 223 | N | 9 | 20221211 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 223 | F | 10 | 20220210 |
| EPI_ISL_14259506 | NSP3 | hCoV-19/Scotland/SCOT-16796/2022 | K | 223 | G | 2 | 20220713 |
| EPI_ISL_15335536 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N29/2022 | K | 223 | Q | 5 | 20220819 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | K | 223 | V | 2 | 20231007 |
| EPI_ISL_11793560 | NSP3 | hCoV-19/India/KA-SEQ_14461_S322_R1_001/2022 | K | 223 | insNADIVEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVYIK | 1 | 20220215 |
| EPI_ISL_18831497 | NSP3 | hCoV-19/Pakistan/DUHS-09/2024 | K | 223 | L | 3 | 20240114 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | K | 223 | del | 67 | 20240812 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | K | 223 | I | 20 | 20230412 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | K | 223 | D | 1 | 20211122 |
| EPI_ISL_18711358 | NSP3 | hCoV-19/Australia/TAS006555/2023 | K | 223 | R | 296 | 20231220 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | K | 223 | A | 5 | 20230425 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | K | 223 | S | 6 | 20240316 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 223 | E | 7 | 20221229 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | K | 223 | T | 31 | 20230420 |
| EPI_ISL_14770230 | NSP3 | hCoV-19/India/OR-ILSGS17429/2022 | K | 223 | stop | 51 | 20220316 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | K | 223 | insFYPP | 1 | 20230217 |
| EPI_ISL_19707725 | NSP3 | hCoV-19/Japan/FR011-0031/2025 | N | 224 | S | 359 | 20250114 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | N | 224 | E | 4 | 20221227 |
| EPI_ISL_6587618 | NSP3 | hCoV-19/Turkey/HSGM-E19484/2021 | N | 224 | insVYIKN | 1 | 20211104 |
| EPI_ISL_19418677 | NSP3 | hCoV-19/USA/MD-MDH-10552/2024 | N | 224 | K | 188 | 20240820 |
| EPI_ISL_19309055 | NSP3 | hCoV-19/Japan/FR057-0064/2024 | N | 224 | Y | 42 | 20240625 |
| EPI_ISL_19377480 | NSP3 | hCoV-19/Japan/FR047-0484/2024 | N | 224 | B | 8 | 20240624 |
| EPI_ISL_15335536 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N29/2022 | N | 224 | P | 2 | 20220819 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | N | 224 | Q | 2 | 20230217 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | N | 224 | C | 12 | 20240316 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | N | 224 | V | 5 | 20221229 |
| EPI_ISL_19265273 | NSP3 | hCoV-19/Wales/CLIMB-CM7Y8OX5/2024 | N | 224 | H | 29 | 20240701 |
| EPI_ISL_18398736 | NSP3 | hCoV-19/England/CLIMB-CM7Y8ETO/2023 | N | 224 | I | 27 | 20231007 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | N | 224 | A | 1 | 20230420 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | N | 224 | del | 70 | 20240812 |
| EPI_ISL_19803618 | NSP3 | hCoV-19/USA/WI-WSLH-2500826/2025 | N | 224 | T | 105 | 20250215 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | N | 224 | G | 3 | 20231007 |
| EPI_ISL_10753248 | NSP3 | hCoV-19/India/KA-SEQ_13806_S248_R1_001/2022 | N | 224 | L | 15 | 20220211 |
| EPI_ISL_19280911 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284575/2024 | N | 224 | M | 66 | 20240703 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 224 | R | 1 | 20220210 |
| EPI_ISL_19221336 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBB46819/2024 | N | 224 | D | 128 | 20240617 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | A | 225 | I | 3 | 20230420 |
| EPI_ISL_18831497 | NSP3 | hCoV-19/Pakistan/DUHS-09/2024 | A | 225 | L | 4 | 20240114 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | A | 225 | S | 205 | 20240316 |
| EPI_ISL_16407945 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1113/2022 | A | 225 | stop | 1 | 20221118 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | A | 225 | Y | 1 | 20210806 |
| EPI_ISL_18263937 | NSP3 | hCoV-19/Denmark/DCGC-659193/2023 | A | 225 | G | 7 | 20230904 |
| EPI_ISL_19280911 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284575/2024 | A | 225 | Q | 69 | 20240703 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | A | 225 | F | 1 | 20220811 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | A | 225 | insVTPK | 1 | 20221211 |
| EPI_ISL_14770236 | NSP3 | hCoV-19/India/OR-ILSGS17458/2022 | A | 225 | M | 2 | 20220324 |
| EPI_ISL_15335536 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N29/2022 | A | 225 | P | 3 | 20220819 |
| EPI_ISL_19416597 | NSP3 | hCoV-19/Brazil/RS-LGBM-HMV-02-0581-P/2024 | A | 225 | T | 739 | 20240331 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | A | 225 | E | 65 | 20230928 |
| EPI_ISL_19812075 | NSP3 | hCoV-19/USA/CO-CDPHE-43254856/2025 | A | 225 | V | 4988 | 20250322 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | A | 225 | H | 3 | 20220201 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | A | 225 | K | 3 | 20220205 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 225 | N | 1 | 20230217 |
| EPI_ISL_16946511 | NSP3 | hCoV-19/USA/ID-IBL-873722/2023 | A | 225 | R | 7 | 20230118 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | A | 225 | del | 72 | 20240812 |
| EPI_ISL_13346221 | NSP3 | hCoV-19/USA/ID-IBL-824804/2022 | A | 225 | C | 48 | 20220601 |
| EPI_ISL_18126222 | NSP3 | hCoV-19/USA/NV-SNPHL-775307/2023 | A | 225 | D | 64 | 20230810 |
| EPI_ISL_14770236 | NSP3 | hCoV-19/India/OR-ILSGS17458/2022 | D | 226 | Q | 7 | 20220324 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | D | 226 | del | 73 | 20240812 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | D | 226 | K | 4 | 20230217 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | D | 226 | P | 1 | 20221130 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | D | 226 | F | 1 | 20230412 |
| EPI_ISL_18831497 | NSP3 | hCoV-19/Pakistan/DUHS-09/2024 | D | 226 | M | 2 | 20240114 |
| EPI_ISL_18594162 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-020494/2023 | D | 226 | A | 82 | 20231113 |
| EPI_ISL_13346221 | NSP3 | hCoV-19/USA/ID-IBL-824804/2022 | D | 226 | R | 51 | 20220601 |
| EPI_ISL_17858890 | NSP3 | hCoV-19/Japan/PG-456435/2022 | D | 226 | L | 3 | 20220812 |
| EPI_ISL_19616344 | NSP3 | hCoV-19/France/IDF-RELAB-IPP13206/2024 | D | 226 | H | 82 | 20241105 |
| EPI_ISL_13982724 | NSP3 | hCoV-19/USA/WA-UW-22070690032/2022 | D | 226 | C | 1 | 20220706 |
| EPI_ISL_19280911 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284575/2024 | D | 226 | T | 73 | 20240703 |
| EPI_ISL_19705828 | NSP3 | hCoV-19/USA/UT-UPHL-250131123425/2025 | D | 226 | G | 228 | 20250125 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 226 | S | 1 | 20210318 |
| EPI_ISL_19819862 | NSP3 | hCoV-19/Spain/AS-HUCA-232523861/2025 | D | 226 | Y | 1247 | 20250324 |
| EPI_ISL_18747893 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019643_01/2023 | D | 226 | E | 78 | 20231011 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | D | 226 | I | 2 | 20221126 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | D | 226 | V | 8 | 20221227 |
| EPI_ISL_19801241 | NSP3 | hCoV-19/Netherlands/LI-RIVM-145221/2025 | D | 226 | N | 567 | 20250316 |
| EPI_ISL_19500124 | NSP3 | hCoV-19/USA/FL-CDC-LC1123889/2024 | D | 226 | B | 15 | 20241008 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | I | 227 | A | 2 | 20221229 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | I | 227 | E | 2 | 20230217 |
| EPI_ISL_17858890 | NSP3 | hCoV-19/Japan/PG-456435/2022 | I | 227 | S | 3 | 20220812 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | I | 227 | stop | 3 | 20220205 |
| EPI_ISL_13346221 | NSP3 | hCoV-19/USA/ID-IBL-824804/2022 | I | 227 | H | 49 | 20220601 |
| EPI_ISL_16946511 | NSP3 | hCoV-19/USA/ID-IBL-873722/2023 | I | 227 | C | 9 | 20230118 |
| EPI_ISL_19630896 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS101210/2024 | I | 227 | L | 157 | 20241214 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | I | 227 | F | 28 | 20230217 |
| EPI_ISL_19744593 | NSP3 | hCoV-19/Singapore/Y25R8MSC47/2025 | I | 227 | J | 2 | 20250218 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | I | 227 | del | 83 | 20240812 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | I | 227 | W | 1 | 20230928 |
| EPI_ISL_18268993 | NSP3 | hCoV-19/USA/MS-MSPHL-0522/2023 | I | 227 | T | 10 | 20230808 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | I | 227 | D | 5 | 20230420 |
| EPI_ISL_17018138 | NSP3 | hCoV-19/Austria/AGES-1117021/2023 | I | 227 | M | 9 | 20230213 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | I | 227 | Y | 8 | 20240316 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | I | 227 | K | 1 | 20221211 |
| EPI_ISL_19697587 | NSP3 | hCoV-19/Japan/FR038-0002/2025 | I | 227 | V | 917 | 20250114 |
| EPI_ISL_18548419 | NSP3 | hCoV-19/env/Germany/BY-LGL-6062996/2023 | V | 228 | E | 22 | 20231106 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | V | 228 | del | 86 | 20240812 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | V | 228 | insW | 1 | 20210812 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | V | 228 | F | 6 | 20220201 |
| EPI_ISL_19280911 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284575/2024 | V | 228 | W | 70 | 20240703 |
| EPI_ISL_19149033 | NSP3 | hCoV-19/USA/NM-NMDOH-009937/2024 | V | 228 | G | 12 | 20240224 |
| EPI_ISL_19748364 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00021565_01/2024 | V | 228 | A | 190 | 20240805 |
| EPI_ISL_19143505 | NSP3 | hCoV-19/Pakistan/13759053/2024 | V | 228 | stop | 7 | 20240316 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | V | 228 | K | 1 | 20221211 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | V | 228 | R | 1 | 20210319 |
| EPI_ISL_18640389 | NSP3 | hCoV-19/Netherlands/GE-RIVM-134366/2023 | V | 228 | L | 78 | 20231128 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | V | 228 | P | 1 | 20210803 |
| EPI_ISL_19377937 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55029/2024 | V | 228 | M | 2314 | 20240820 |
| EPI_ISL_18831497 | NSP3 | hCoV-19/Pakistan/DUHS-09/2024 | V | 228 | T | 3 | 20240114 |
| EPI_ISL_13346221 | NSP3 | hCoV-19/USA/ID-IBL-824804/2022 | V | 228 | C | 50 | 20220601 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | V | 228 | D | 2 | 20230420 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 228 | N | 5 | 20221229 |
| EPI_ISL_16258490 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2005/2022 | V | 228 | Y | 1 | 20220811 |
| EPI_ISL_14770236 | NSP3 | hCoV-19/India/OR-ILSGS17458/2022 | E | 229 | W | 2 | 20220324 |
| EPI_ISL_19484988 | NSP3 | hCoV-19/Canary Islands/HUGCDN-04472460/2024 | E | 229 | D | 525 | 20240822 |
| EPI_ISL_19755638 | NSP3 | hCoV-19/USA/IL-RIPHL_15331_G/2025 | E | 229 | K | 935 | 20250211 |
| EPI_ISL_19761948 | NSP3 | hCoV-19/USA/CO-CDPHE-43050007/2025 | E | 229 | A | 74 | 20250216 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | E | 229 | insGDC | 1 | 20230217 |
| EPI_ISL_19479412 | NSP3 | hCoV-19/Mexico/QUE_InDRE_FB1478/2024 | E | 229 | stop | 11 | 20240727 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | E | 229 | N | 6 | 20221229 |
| EPI_ISL_2370880 | NSP3 | hCoV-19/Greece/196399/2021 | E | 229 | M | 2 | 20210501 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | E | 229 | del | 79 | 20240812 |
| EPI_ISL_19827924 | NSP3 | hCoV-19/USA/CA-CDPH-500146088/2025 | E | 229 | G | 1586 | 20250128 |
| EPI_ISL_9062834 | NSP3 | hCoV-19/England/NEWC-33259E0/2022 | E | 229 | Z | 4 | 20220117 |
| EPI_ISL_17523705 | NSP3 | hCoV-19/USA/TX-HMH-M-128091/2023 | E | 229 | R | 10 | 20230405 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 229 | S | 11 | 20230420 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | E | 229 | I | 9 | 20230412 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | E | 229 | T | 1 | 20210803 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 229 | F | 1 | 20210318 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | E | 229 | V | 58 | 20230925 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 229 | C | 1 | 20220210 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | E | 229 | Q | 13 | 20231007 |
| EPI_ISL_11062061 | NSP3 | hCoV-19/Wales/PHWC-PEHF5J/2022 | E | 230 | Z | 6 | 20220226 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 230 | V | 2 | 20220210 |
| EPI_ISL_18967443 | NSP3 | hCoV-19/USA/DE-DHSS-B1289909/2024 | E | 230 | Q | 12 | 20240218 |
| EPI_ISL_16946511 | NSP3 | hCoV-19/USA/ID-IBL-873722/2023 | E | 230 | R | 11 | 20230118 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | E | 230 | T | 4 | 20221229 |
| EPI_ISL_14283389 | NSP3 | hCoV-19/USA/CA-CDC-LC0797473/2022 | E | 230 | A | 5 | 20220719 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | E | 230 | insIDITF | 1 | 20211122 |
| EPI_ISL_17955727 | NSP3 | hCoV-19/USA/TX-HMH-129650/2023 | E | 230 | stop | 6 | 20230622 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 230 | I | 1 | 20211006 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | E | 230 | del | 83 | 20240812 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | E | 230 | N | 1 | 20221227 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | E | 230 | D | 75 | 20230928 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | E | 230 | M | 1 | 20230412 |
| EPI_ISL_19280911 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284575/2024 | E | 230 | K | 99 | 20240703 |
| EPI_ISL_3161300 | NSP3 | hCoV-19/USA/LA-OD-2970156/2021 | E | 230 | H | 1 | 20210707 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | E | 230 | L | 4 | 20220201 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | E | 230 | S | 7 | 20230412 |
| EPI_ISL_12582757 | NSP3 | hCoV-19/Turkey/HSGM-GS2109/2022 | E | 230 | G | 7 | 20220401 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | A | 231 | R | 5 | 20220210 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | A | 231 | Q | 5 | 20210522 |
| EPI_ISL_19251591 | NSP3 | hCoV-19/Australia/QLD0x014685/2024 | A | 231 | S | 721 | 20240619 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | A | 231 | I | 1 | 20211019 |
| EPI_ISL_17158270 | NSP3 | hCoV-19/USA/WI-UW-13667/2022 | A | 231 | insT | 3 | 20221006 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | A | 231 | del | 79 | 20240812 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 231 | Y | 1 | 20211006 |
| EPI_ISL_17523705 | NSP3 | hCoV-19/USA/TX-HMH-M-128091/2023 | A | 231 | stop | 8 | 20230405 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | A | 231 | K | 5 | 20221227 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | A | 231 | N | 1 | 20230412 |
| EPI_ISL_19824826 | NSP3 | hCoV-19/Spain/PV-HUD-39835800/2025 | A | 231 | V | 15095 | 20250404 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | A | 231 | F | 2 | 20221126 |
| EPI_ISL_19280911 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284575/2024 | A | 231 | L | 84 | 20240703 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | A | 231 | W | 10 | 20230214 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | A | 231 | E | 5 | 20230217 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | A | 231 | G | 4 | 20231007 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | A | 231 | C | 1 | 20221118 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | A | 231 | D | 7 | 20230928 |
| EPI_ISL_19514731 | NSP3 | hCoV-19/Canada/ON-PHL-202417887/2024 | A | 231 | T | 357 | 20241015 |
| EPI_ISL_19071003 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6672/2024 | A | 231 | P | 3 | 20240321 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | K | 232 | A | 2 | 20221126 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | K | 232 | Y | 1 | 20211019 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | K | 232 | V | 4 | 20221211 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | K | 232 | G | 2 | 20210909 |
| EPI_ISL_18328678 | NSP3 | hCoV-19/USA/CA-HLX-STM-P898C8D7V/2023 | K | 232 | I | 89 | 20230823 |
| EPI_ISL_19507970 | NSP3 | hCoV-19/England/CLIMB-CM7YG8FB/2024 | K | 232 | T | 195 | 20240917 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | K | 232 | insG | 1 | 20210805 |
| EPI_ISL_19212618 | NSP3 | hCoV-19/env/India/MH-NCL-257-14/2024 | K | 232 | S | 3 | 20240214 |
| EPI_ISL_19672228 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14229/2024 | K | 232 | E | 70 | 20240724 |
| EPI_ISL_18318398 | NSP3 | hCoV-19/USA/CA-HLX-STM-VVBG7SDCG/2023 | K | 232 | N | 22 | 20230828 |
| EPI_ISL_19511448 | NSP3 | hCoV-19/Spain/CT-HUVH-EXE310361/2024 | K | 232 | R | 217 | 20241015 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | K | 232 | Q | 7 | 20230420 |
| EPI_ISL_3299130 | NSP3 | hCoV-19/Sweden/UUH-000199209520/2021 | K | 232 | insstopX | 1 | 20210415 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | K | 232 | F | 4 | 20211104 |
| EPI_ISL_19212815 | NSP3 | hCoV-19/env/India/MH-NCL-238-29/2024 | K | 232 | stop | 17 | 20240129 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 232 | L | 7 | 20220210 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | K | 232 | P | 1 | 20230412 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | K | 232 | insstopNQQWL | 1 | 20220630 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | K | 232 | D | 2 | 20230412 |
| EPI_ISL_19459314 | NSP3 | hCoV-19/India/MH-ICMR-NIV-243691/2024 | K | 232 | del | 83 | 20240826 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | K | 232 | M | 1 | 20210803 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | K | 233 | insstopNQQLL | 1 | 20220117 |
| EPI_ISL_19831287 | NSP3 | hCoV-19/Australia/WA16904/2025 | K | 233 | R | 1042 | 20250402 |
| EPI_ISL_1097310 | NSP3 | hCoV-19/Belgium/UZA-UA-CV0614677276/2021 | K | 233 | insstopHQQWLL | 1 | 20210126 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | K | 233 | insstopNQQWLL | 18 | 20230220 |
| EPI_ISL_19710032 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56178/2025 | K | 233 | E | 367 | 20250120 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | K | 233 | stop | 8 | 20220201 |
| EPI_ISL_3161300 | NSP3 | hCoV-19/USA/LA-OD-2970156/2021 | K | 233 | H | 1 | 20210707 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | K | 233 | del | 86 | 20240812 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | K | 233 | Y | 1 | 20221227 |
| EPI_ISL_2370880 | NSP3 | hCoV-19/Greece/196399/2021 | K | 233 | P | 2 | 20210501 |
| EPI_ISL_19148745 | NSP3 | hCoV-19/USA/CA-MCPHL-GBD00255/2024 | K | 233 | Q | 26 | 20240423 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | K | 233 | insGstopNQQWLL | 1 | 20210812 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | K | 233 | V | 4 | 20221126 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | K | 233 | insstopNQQKLL | 1 | 20210813 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | K | 233 | M | 3 | 20230420 |
| EPI_ISL_19821063 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11225/2025 | K | 233 | N | 1771 | 20250317 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 233 | S | 1 | 20220210 |
| EPI_ISL_19764012 | NSP3 | hCoV-19/Japan/FR015-0051/2025 | K | 233 | T | 86 | 20250214 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | K | 233 | I | 3 | 20221211 |
| EPI_ISL_19192556 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15989/2024 | K | 233 | G | 4 | 20240305 |
| EPI_ISL_12584102 | NSP3 | hCoV-19/Turkey/HSGM-GS2934/2022 | K | 233 | A | 2 | 20220407 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | K | 233 | L | 5 | 20220630 |
| EPI_ISL_19426078 | NSP3 | hCoV-19/USA/TX-HMH-M-145378/2024 | V | 234 | G | 80 | 20240822 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | V | 234 | Q | 1 | 20230928 |
| EPI_ISL_9527059 | NSP3 | hCoV-19/USA/GA-CDC-ASC210599566/2022 | V | 234 | K | 1 | 20220114 |
| EPI_ISL_18969145 | NSP3 | hCoV-19/India/DL-JAN-MAMC-LNHD-10/2024 | V | 234 | stop | 12 | 20240108 |
| EPI_ISL_19300320 | NSP3 | hCoV-19/Austria/MUW_1738033/2024 | V | 234 | A | 539 | 20240708 |
| EPI_ISL_19610945 | NSP3 | hCoV-19/Hungary/102313-UPL24-005073/2024 | V | 234 | I | 648 | 20241007 |
| EPI_ISL_5383613 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-64373/2021 | V | 234 | C | 1 | 20210920 |
| EPI_ISL_16342459 | NSP3 | hCoV-19/India/MH-INSACOG-CSIR-NEERI2808/2022 | V | 234 | E | 13 | 20221017 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | V | 234 | W | 4 | 20211104 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | V | 234 | F | 2 | 20230217 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 234 | D | 3 | 20220210 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 234 | N | 4 | 20230412 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 234 | H | 1 | 20220210 |
| EPI_ISL_19661603 | NSP3 | hCoV-19/New Zealand/24YA7797/2024 | V | 234 | L | 211 | 20241205 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | V | 234 | S | 2 | 20230217 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | V | 234 | del | 70 | 20240812 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | V | 234 | M | 27 | 20230220 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | V | 234 | T | 3 | 20230217 |
| EPI_ISL_19242438 | NSP3 | hCoV-19/Yunnan/YNCDC-1061/2024 | K | 235 | E | 176 | 20240517 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | K | 235 | P | 1 | 20230412 |
| EPI_ISL_17958581 | NSP3 | hCoV-19/Japan/PG-532151/2023 | K | 235 | N | 54 | 20230421 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 235 | S | 1 | 20210318 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | K | 235 | V | 9 | 20230217 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | K | 235 | M | 3 | 20230425 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | K | 235 | A | 4 | 20230217 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | K | 235 | del | 67 | 20240812 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | K | 235 | D | 1 | 20211019 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 235 | G | 3 | 20230108 |
| EPI_ISL_19831711 | NSP3 | hCoV-19/Luxembourg/LNS1434608/2025 | K | 235 | R | 247 | 20250217 |
| EPI_ISL_18731390 | NSP3 | hCoV-19/Chile/LI-94877/2023 | K | 235 | Q | 125 | 20231210 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | K | 235 | F | 3 | 20230412 |
| EPI_ISL_19293090 | NSP3 | hCoV-19/Curacao/CW-RIVM-139907/2024 | K | 235 | I | 20 | 20240701 |
| EPI_ISL_8035693 | NSP3 | hCoV-19/Pakistan/Nano B3 S-07/2021 | K | 235 | stop | 1 | 20211211 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | K | 235 | L | 5 | 20221118 |
| EPI_ISL_18990502 | NSP3 | hCoV-19/Canada/ON-PHL-202406151/2024 | K | 235 | T | 259 | 20240307 |
| EPI_ISL_19014027 | NSP3 | hCoV-19/Japan/6420947_S24/2023 | P | 236 | Q | 20 | 20231201 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | P | 236 | del | 66 | 20240812 |
| EPI_ISL_19785395 | NSP3 | hCoV-19/Japan/FR302-0218/2025 | P | 236 | S | 2772 | 20250207 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | P | 236 | K | 1 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 236 | I | 1 | 20210318 |
| EPI_ISL_8936192 | NSP3 | hCoV-19/France/GES-HMN-21122211126/2021 | P | 236 | R | 19 | 20211213 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | P | 236 | stop | 2 | 20230217 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | P | 236 | F | 4 | 20211104 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | P | 236 | G | 9 | 20230412 |
| EPI_ISL_1420635 | NSP3 | hCoV-19/Brazil/RJ-IC01044_57-20/2020 | P | 236 | insstop | 1 | 20200417 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | P | 236 | V | 4 | 20230928 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | P | 236 | D | 1 | 20221227 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | P | 236 | N | 2 | 20230420 |
| EPI_ISL_19426078 | NSP3 | hCoV-19/USA/TX-HMH-M-145378/2024 | P | 236 | T | 159 | 20240822 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | P | 236 | C | 1 | 20220210 |
| EPI_ISL_19762664 | NSP3 | hCoV-19/Chile/LI-ISPC-12978/2025 | P | 236 | L | 6767 | 20250210 |
| EPI_ISL_18935455 | NSP3 | hCoV-19/Brazil/MS-FIOCRUZ-397/2024 | P | 236 | A | 37 | 20240104 |
| EPI_ISL_19803733 | NSP3 | hCoV-19/USA/WI-WSLH-2500589/2025 | T | 237 | A | 12133 | 20250130 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | T | 237 | W | 1 | 20200715 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | T | 237 | V | 31 | 20230425 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | T | 237 | del | 75 | 20240315 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | T | 237 | G | 4 | 20230928 |
| EPI_ISL_17858890 | NSP3 | hCoV-19/Japan/PG-456435/2022 | T | 237 | F | 2 | 20220812 |
| EPI_ISL_19560676 | NSP3 | hCoV-19/Brazil/SP-IAL-357976770/2024 | T | 237 | R | 18 | 20241002 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 237 | D | 1 | 20220210 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | T | 237 | stop | 1 | 20210803 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | T | 237 | E | 1 | 20221118 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | T | 237 | Q | 10 | 20230217 |
| EPI_ISL_10924623 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11597/2022 | T | 237 | L | 6 | 20220226 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | T | 237 | M | 28 | 20230220 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | T | 237 | H | 1 | 20221126 |
| EPI_ISL_19077568 | NSP3 | hCoV-19/USA/WI-WSLH-2401160/2024 | T | 237 | K | 181 | 20240323 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | T | 237 | Y | 1 | 20211122 |
| EPI_ISL_18918672 | NSP3 | hCoV-19/Belgium/Sciensano-LS-S0840/2024 | T | 237 | P | 79 | 20240115 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | T | 237 | S | 12 | 20230217 |
| EPI_ISL_19772255 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10645/2025 | T | 237 | I | 6275 | 20250221 |
| EPI_ISL_19426078 | NSP3 | hCoV-19/USA/TX-HMH-M-145378/2024 | T | 237 | N | 11 | 20240822 |
| EPI_ISL_19426078 | NSP3 | hCoV-19/USA/TX-HMH-M-145378/2024 | V | 238 | I | 14 | 20240822 |
| EPI_ISL_19493265 | NSP3 | hCoV-19/USA/CA-SCPHL-24WGS00803/2024 | V | 238 | F | 41 | 20240921 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 238 | R | 2 | 20220210 |
| EPI_ISL_18379119 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-019679/2023 | V | 238 | A | 125 | 20230821 |
| EPI_ISL_18744056 | NSP3 | hCoV-19/USA/ID-IBL-903981/2023 | V | 238 | T | 31 | 20231108 |
| EPI_ISL_19561072 | NSP3 | hCoV-19/Israel/ICH-741227067/2024 | V | 238 | M | 886 | 20241110 |
| EPI_ISL_10924623 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11597/2022 | V | 238 | E | 3 | 20220226 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | V | 238 | C | 6 | 20230425 |
| EPI_ISL_19044812 | NSP3 | hCoV-19/USA/NJ-PHEL-V24004278/2024 | V | 238 | W | 6 | 20240322 |
| EPI_ISL_16741178 | NSP3 | hCoV-19/India/TN-CORES_24780/2022 | V | 238 | N | 1 | 20220103 |
| EPI_ISL_10690923 | NSP3 | hCoV-19/England/LSPA-3875F17/2022 | V | 238 | G | 9 | 20220225 |
| EPI_ISL_19833200 | NSP3 | hCoV-19/Poland/Kce-46/2025 | V | 238 | L | 392319 | 20250411 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | V | 238 | S | 4 | 20221126 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | V | 238 | insVGDVVQEG | 1 | 20211122 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | V | 238 | del | 54 | 20240315 |
| EPI_ISL_18263494 | NSP3 | hCoV-19/Morocco/INH-4551/2021 | V | 238 | D | 1 | 20210522 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | V | 238 | K | 3 | 20230217 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 238 | Y | 1 | 20230412 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | V | 238 | insSYTHQV | 1 | 20230217 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | V | 238 | Q | 1 | 20230928 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 239 | D | 2 | 20230412 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | V | 239 | Q | 4 | 20230928 |
| EPI_ISL_19801253 | NSP3 | hCoV-19/Netherlands/UT-RIVM-145224/2025 | V | 239 | I | 792 | 20250312 |
| EPI_ISL_18744056 | NSP3 | hCoV-19/USA/ID-IBL-903981/2023 | V | 239 | Y | 21 | 20231108 |
| EPI_ISL_17838260 | NSP3 | hCoV-19/England/PHEC-YYE5PYW/2023 | V | 239 | L | 19 | 20230609 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | V | 239 | stop | 4 | 20210805 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | V | 239 | del | 56 | 20240315 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | V | 239 | T | 30 | 20230220 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 239 | G | 8 | 20221229 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | V | 239 | W | 1 | 20210717 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | V | 239 | M | 2 | 20221211 |
| EPI_ISL_18840358 | NSP3 | hCoV-19/USA/ID-IBL-906712/2024 | V | 239 | E | 12 | 20240102 |
| EPI_ISL_8806274 | NSP3 | hCoV-19/India/MH-NCCS-2748700649247/2021 | V | 239 | C | 2 | 20211027 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | V | 239 | S | 2 | 20211227 |
| EPI_ISL_19679813 | NSP3 | hCoV-19/USA/NE-NPHL-RP250326/2024 | V | 239 | F | 408 | 20241222 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | V | 239 | K | 3 | 20230420 |
| EPI_ISL_18694296 | NSP3 | hCoV-19/Spain/CT-HUVH-EXE89327/2023 | V | 239 | A | 24 | 20231219 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | V | 239 | N | 1 | 20210803 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | V | 240 | del | 61 | 20240315 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 240 | G | 4 | 20221229 |
| EPI_ISL_19297760 | NSP3 | hCoV-19/Russia/MOS-RII-MH193916S/2024 | V | 240 | A | 211 | 20240619 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | V | 240 | M | 6 | 20230217 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | V | 240 | D | 3 | 20230928 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | V | 240 | Y | 2 | 20230217 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | V | 240 | insFGDDTVIEVQGY | 1 | 20230217 |
| EPI_ISL_19495863 | NSP3 | hCoV-19/Canada/BC-BCCDC-740414/2024 | V | 240 | I | 379 | 20240927 |
| EPI_ISL_8035693 | NSP3 | hCoV-19/Pakistan/Nano B3 S-07/2021 | V | 240 | C | 3 | 20211211 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | V | 240 | N | 4 | 20230420 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 240 | F | 1 | 20220210 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | V | 240 | L | 46 | 20231007 |
| EPI_ISL_5128237 | NSP3 | hCoV-19/France/PAC-HCL021149211501/2021 | V | 240 | K | 1 | 20210810 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | V | 240 | H | 1 | 20221126 |
| EPI_ISL_18744056 | NSP3 | hCoV-19/USA/ID-IBL-903981/2023 | V | 240 | stop | 27 | 20231108 |
| EPI_ISL_13888213 | NSP3 | hCoV-19/USA/NY-PRL-220708_05F11/2022 | V | 240 | insV | 3 | 20220706 |
| EPI_ISL_1147110 | NSP3 | hCoV-19/Germany/NW-RKI-I-016948/2021 | V | 240 | Q | 1 | 20210126 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | V | 240 | E | 4 | 20230425 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 240 | S | 5 | 20220210 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | V | 240 | T | 3 | 20230217 |
| EPI_ISL_18909555 | NSP3 | hCoV-19/Singapore/R12MQ12/2024 | N | 241 | B | 3 | 20240208 |
| EPI_ISL_19525425 | NSP3 | hCoV-19/USA/NY-URMC-07S1S170-1/2024 | N | 241 | S | 230 | 20240729 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | N | 241 | del | 58 | 20240315 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | N | 241 | L | 2 | 20230420 |
| EPI_ISL_18548419 | NSP3 | hCoV-19/env/Germany/BY-LGL-6062996/2023 | N | 241 | K | 9 | 20231106 |
| EPI_ISL_10523937 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL980/2022 | N | 241 | stop | 3 | 20220114 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | N | 241 | Y | 3 | 20230412 |
| EPI_ISL_16258482 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2062/2022 | N | 241 | Q | 7 | 20220730 |
| EPI_ISL_18706348 | NSP3 | hCoV-19/France/PAC-HCL723001821401/2023 | N | 241 | I | 16 | 20231218 |
| EPI_ISL_3161300 | NSP3 | hCoV-19/USA/LA-OD-2970156/2021 | N | 241 | P | 3 | 20210707 |
| EPI_ISL_18501365 | NSP3 | hCoV-19/Chile/MA-75517/2023 | N | 241 | G | 9 | 20230928 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | N | 241 | T | 33 | 20231007 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | N | 241 | H | 2 | 20220210 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | N | 241 | E | 5 | 20230217 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | N | 241 | V | 3 | 20230412 |
| EPI_ISL_18909529 | NSP3 | hCoV-19/Singapore/R12MQ46/2024 | N | 241 | D | 15 | 20240213 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | N | 241 | C | 1 | 20221118 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | N | 241 | M | 4 | 20230227 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | A | 242 | C | 10 | 20230405 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | A | 242 | L | 7 | 20230217 |
| EPI_ISL_18870503 | NSP3 | hCoV-19/Poland/0128WSN2024_wsseol/2023 | A | 242 | P | 6 | 20231212 |
| EPI_ISL_16258482 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2062/2022 | A | 242 | I | 2 | 20220730 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | A | 242 | D | 2 | 20230412 |
| EPI_ISL_18733880 | NSP3 | hCoV-19/South Korea/KDCA279795/2023 | A | 242 | E | 18 | 20231204 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 242 | N | 3 | 20230108 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 242 | F | 2 | 20211006 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 242 | H | 1 | 20221229 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | A | 242 | Q | 7 | 20230227 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | A | 242 | G | 9 | 20221227 |
| EPI_ISL_19823014 | NSP3 | hCoV-19/USA/MI-UM-10062189758/2025 | A | 242 | T | 2167 | 20250204 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | A | 242 | M | 27 | 20230220 |
| EPI_ISL_19474175 | NSP3 | hCoV-19/USA/CA-CDPH-500142534/2024 | A | 242 | S | 157 | 20240830 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | A | 242 | del | 57 | 20240315 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | A | 242 | Y | 2 | 20230217 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | A | 242 | K | 4 | 20230425 |
| EPI_ISL_19792891 | NSP3 | hCoV-19/USA/NY-PRL-250318_81G08/2025 | A | 242 | V | 1062 | 20250307 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | A | 242 | insstopC | 1 | 20210803 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 243 | K | 1 | 20221229 |
| EPI_ISL_16258482 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2062/2022 | A | 243 | insTTQNDE | 1 | 20220730 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | A | 243 | H | 2 | 20221130 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | A | 243 | L | 5 | 20220801 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | A | 243 | W | 2 | 20221211 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | A | 243 | stop | 2 | 20230217 |
| EPI_ISL_3941723 | NSP3 | hCoV-19/USA/KS-KSU-2672/2021 | A | 243 | N | 2 | 20210817 |
| EPI_ISL_19560637 | NSP3 | hCoV-19/Brazil/MS-IAL-357944449/2024 | A | 243 | D | 10 | 20240910 |
| EPI_ISL_18840358 | NSP3 | hCoV-19/USA/ID-IBL-906712/2024 | A | 243 | F | 7 | 20240102 |
| EPI_ISL_18534753 | NSP3 | hCoV-19/USA/VA-CDC-QDX87048245/2023 | A | 243 | S | 190 | 20231030 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | A | 243 | E | 27 | 20230220 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | A | 243 | P | 7 | 20230227 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 243 | Y | 1 | 20211006 |
| EPI_ISL_19649211 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-2286/2024 | A | 243 | V | 700 | 20241021 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | A | 243 | Q | 2 | 20210803 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | A | 243 | C | 1 | 20210805 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | A | 243 | G | 6 | 20230420 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | A | 243 | I | 6 | 20230405 |
| EPI_ISL_15688612 | NSP3 | hCoV-19/Chile/AT-121802/2022 | A | 243 | M | 1 | 20221020 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | A | 243 | R | 1 | 20210114 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | A | 243 | del | 58 | 20240315 |
| EPI_ISL_19802378 | NSP3 | hCoV-19/USA/CO-CDPHE-43210596/2025 | A | 243 | T | 2424 | 20250312 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | N | 244 | V | 5 | 20231007 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | N | 244 | del | 45 | 20240315 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | N | 244 | insPstop | 1 | 20210805 |
| EPI_ISL_18307155 | NSP3 | hCoV-19/Singapore/R68MR16/2023 | N | 244 | B | 3 | 20230918 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | N | 244 | I | 8 | 20230425 |
| EPI_ISL_9709923 | NSP3 | hCoV-19/Chile/RM-19146/2022 | N | 244 | P | 3 | 20220130 |
| EPI_ISL_18536020 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-132993/2023 | N | 244 | D | 64 | 20231004 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | N | 244 | L | 3 | 20221229 |
| EPI_ISL_19533983 | NSP3 | hCoV-19/USA/CO-CDPHE-42384574/2024 | N | 244 | S | 1279 | 20241003 |
| EPI_ISL_19014027 | NSP3 | hCoV-19/Japan/6420947_S24/2023 | N | 244 | Y | 2 | 20231201 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | N | 244 | A | 1 | 20230420 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | N | 244 | M | 4 | 20230227 |
| EPI_ISL_19804356 | NSP3 | hCoV-19/France/OCC-CHU-TLS-6004507814/2024 | N | 244 | T | 110 | 20240129 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | N | 244 | H | 15 | 20230405 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | N | 244 | E | 29 | 20230220 |
| EPI_ISL_10858505 | NSP3 | hCoV-19/Turkey/HSGM-G2388/2022 | N | 244 | K | 3 | 20220217 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | N | 244 | R | 2 | 20210114 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | N | 244 | Q | 7 | 20230412 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | N | 244 | F | 1 | 20221227 |
| EPI_ISL_7507369 | NSP3 | hCoV-19/USA/CA-CSMC19/2021 | V | 245 | D | 1 | 20210630 |
| EPI_ISL_18255168 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-20/2023 | V | 245 | stop | 6 | 20230405 |
| EPI_ISL_17372595 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2520/2022 | V | 245 | S | 2 | 20221227 |
| EPI_ISL_10944925 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95010/2022 | V | 245 | C | 7 | 20220301 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | V | 245 | T | 3 | 20210805 |
| EPI_ISL_19753427 | NSP3 | hCoV-19/New Zealand/25YA0503/2025 | V | 245 | A | 471 | 20250216 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | V | 245 | del | 38 | 20240315 |
| EPI_ISL_19758040 | NSP3 | hCoV-19/New Zealand/25YA0513/2025 | V | 245 | I | 963 | 20250210 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | V | 245 | insCR | 1 | 20210114 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | V | 245 | P | 1 | 20230412 |
| EPI_ISL_18885499 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y8A1M/2024 | V | 245 | G | 726 | 20240202 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 245 | Y | 1 | 20221229 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 245 | M | 7 | 20230412 |
| EPI_ISL_19690669 | NSP3 | hCoV-19/Netherlands/UT-RIVM-144910/2025 | V | 245 | F | 292 | 20250111 |
| EPI_ISL_19560698 | NSP3 | hCoV-19/Brazil/MS-IAL-357981328/2024 | V | 245 | L | 16 | 20240917 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | V | 245 | N | 3 | 20221211 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | V | 245 | E | 2 | 20230412 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | V | 245 | K | 1 | 20211227 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Y | 246 | del | 59 | 20240315 |
| EPI_ISL_12610878 | NSP3 | hCoV-19/Turkey/HSGM-GS2771/2022 | Y | 246 | Q | 1 | 20220407 |
| EPI_ISL_14749442 | NSP3 | hCoV-19/India/OR-ILSGS17659/2022 | Y | 246 | insQEPstopIRLLTMP | 7 | 20220706 |
| EPI_ISL_19782548 | NSP3 | hCoV-19/USA/MI-UM-G25Y08H2/2025 | Y | 246 | C | 1051 | 20250109 |
| EPI_ISL_19782297 | NSP3 | hCoV-19/USA/NY-NYCPHL-019687/2024 | Y | 246 | H | 706 | 20241205 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | Y | 246 | I | 2 | 20230217 |
| EPI_ISL_19657555 | NSP3 | hCoV-19/Canada/AB-ABPHL-129585/2024 | Y | 246 | S | 10 | 20241220 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | Y | 246 | L | 20 | 20230217 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | Y | 246 | insS | 1 | 20230217 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | Y | 246 | T | 12 | 20230227 |
| EPI_ISL_12753097 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726728530/2022 | Y | 246 | F | 7 | 20220203 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | Y | 246 | K | 5 | 20230412 |
| EPI_ISL_16258482 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2062/2022 | Y | 246 | D | 9 | 20220730 |
| EPI_ISL_17372616 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2524/2022 | Y | 246 | stop | 7 | 20221227 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | Y | 246 | insT | 1 | 20220801 |
| EPI_ISL_19226034 | NSP3 | hCoV-19/USA/NM-NMDOH-014560/2024 | Y | 246 | N | 361 | 20240419 |
| EPI_ISL_17372615 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2644/2022 | Y | 246 | W | 4 | 20221231 |
| EPI_ISL_10080768 | NSP3 | hCoV-19/India/KA-SEQ_9863_S273_R1_001/2022 | Y | 246 | R | 1 | 20220102 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | Y | 246 | V | 4 | 20230412 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | Y | 246 | G | 3 | 20230420 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | Y | 246 | insTLKMQTLWK | 1 | 20220105 |
| EPI_ISL_16741178 | NSP3 | hCoV-19/India/TN-CORES_24780/2022 | Y | 246 | insKA | 1 | 20220103 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | Y | 246 | A | 2 | 20230412 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | Y | 246 | insP | 1 | 20230217 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | Y | 246 | P | 2 | 20231007 |
| EPI_ISL_18986413 | NSP3 | hCoV-19/Turkey/HSGM-AA002199/2023 | L | 247 | F | 60 | 20231216 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | L | 247 | V | 4 | 20230412 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | L | 247 | G | 1 | 20230420 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | L | 247 | insstop | 1 | 20210806 |
| EPI_ISL_17500666 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13856/2023 | L | 247 | H | 1 | 20230329 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | L | 247 | R | 2 | 20210805 |
| EPI_ISL_4311886 | NSP3 | hCoV-19/England/PHEC-Z305Z4A2/2021 | L | 247 | insCRSL | 1 | 20210909 |
| EPI_ISL_14999066 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1099/2021 | L | 247 | S | 2 | 20211008 |
| EPI_ISL_7776869 | NSP3 | hCoV-19/USA/AZ-ASU27485/2021 | L | 247 | J | 22 | 20211211 |
| EPI_ISL_14749442 | NSP3 | hCoV-19/India/OR-ILSGS17659/2022 | L | 247 | C | 13 | 20220706 |
| EPI_ISL_14404645 | NSP3 | hCoV-19/DRC/INRB-RDC-820/2022 | L | 247 | P | 29 | 20220601 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | L | 247 | Y | 2 | 20211227 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | L | 247 | M | 1 | 20230217 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | L | 247 | del | 58 | 20230220 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 247 | Q | 8 | 20230412 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | L | 247 | N | 4 | 20230412 |
| EPI_ISL_8803758 | NSP3 | hCoV-19/India/GA-NCCS-3055200157592/2021 | L | 247 | stop | 2 | 20210803 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | L | 247 | A | 2 | 20221130 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | L | 247 | T | 8 | 20231007 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | L | 247 | I | 43 | 20230217 |
| EPI_ISL_15306143 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-116108/2022 | L | 247 | insKHLLHVstopG | 1 | 20220919 |
| EPI_ISL_19232174 | NSP3 | hCoV-19/Japan/FR066-0062/2024 | K | 248 | N | 25 | 20240607 |
| EPI_ISL_17413372 | NSP3 | hCoV-19/Canada/BC-BCCDC-609263/2023 | K | 248 | T | 93 | 20230307 |
| EPI_ISL_16815981 | NSP3 | hCoV-19/Spain/CT-HUJ23-81046/2023 | K | 248 | I | 16 | 20230113 |
| EPI_ISL_5193471 | NSP3 | hCoV-19/Brazil/RR-FIOCRUZ-ILMD2100126/2021 | K | 248 | insXXX | 1 | 20210818 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 248 | A | 2 | 20221229 |
| EPI_ISL_19362567 | NSP3 | hCoV-19/USA/CA-LACPHL-AY07929/2024 | K | 248 | R | 443 | 20240810 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | K | 248 | G | 1 | 20230420 |
| EPI_ISL_19792550 | NSP3 | hCoV-19/Mauritius/MHW-12416/2025 | K | 248 | Q | 11 | 20250120 |
| EPI_ISL_14037979 | NSP3 | hCoV-19/Chile/LR-84965/2022 | K | 248 | W | 3 | 20220706 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | K | 248 | M | 1 | 20230412 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | K | 248 | L | 6 | 20220201 |
| EPI_ISL_18275318 | NSP3 | hCoV-19/Germany/BE-RKI-I-1137777/2021 | K | 248 | S | 1 | 20210408 |
| EPI_ISL_19816943 | NSP3 | hCoV-19/Norway/3803/2025 | K | 248 | E | 315 | 20250305 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | K | 248 | del | 55 | 20230227 |
| EPI_ISL_1167186 | NSP3 | hCoV-19/Egypt/MASRI-C5-003/2020 | K | 248 | D | 1 | 20200525 |
| EPI_ISL_12319888 | NSP3 | hCoV-19/Turkey/HSGM-GS1489/2022 | K | 248 | stop | 6 | 20220401 |
| EPI_ISL_10080768 | NSP3 | hCoV-19/India/KA-SEQ_9863_S273_R1_001/2022 | K | 248 | V | 2 | 20220102 |
| EPI_ISL_19192536 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15947/2024 | K | 248 | insL | 1 | 20240316 |
| EPI_ISL_5881208 | NSP3 | hCoV-19/Thailand/Kamphaengphet_SEQ19109/2021 | K | 248 | H | 1 | 20211014 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | H | 249 | G | 6 | 20220210 |
| EPI_ISL_13017275 | NSP3 | hCoV-19/Belgium/MBLG-CTMAPF29457422/2022 | H | 249 | C | 7 | 20220513 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | H | 249 | del | 62 | 20230227 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | H | 249 | K | 5 | 20231007 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | H | 249 | W | 2 | 20210806 |
| EPI_ISL_10825131 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81341/2022 | H | 249 | insLLHVstopGKH | 1 | 20220116 |
| EPI_ISL_10080768 | NSP3 | hCoV-19/India/KA-SEQ_9863_S273_R1_001/2022 | H | 249 | stop | 4 | 20220102 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | H | 249 | P | 5 | 20221118 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | H | 249 | M | 3 | 20220801 |
| EPI_ISL_19142067 | NSP3 | hCoV-19/New Zealand/24ZA1833/2024 | H | 249 | Y | 1376 | 20240424 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | H | 249 | D | 10 | 20230217 |
| EPI_ISL_5437220 | NSP3 | hCoV-19/Sweden/UUH-000200008713/2021 | H | 249 | insG | 2 | 20210506 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | H | 249 | A | 4 | 20230412 |
| EPI_ISL_17530347 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13893/2023 | H | 249 | S | 9 | 20230403 |
| EPI_ISL_19080582 | NSP3 | hCoV-19/Chongqing/CQCDC-5326/2023 | H | 249 | N | 50 | 20230918 |
| EPI_ISL_15587448 | NSP3 | hCoV-19/Canada/ON-PHL-22-46818/2022 | H | 249 | R | 28 | 20221017 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | H | 249 | F | 2 | 20240315 |
| EPI_ISL_19756655 | NSP3 | hCoV-19/Japan/FR124-0081/2024 | H | 249 | Q | 379 | 20240813 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | H | 249 | insC | 1 | 20211104 |
| EPI_ISL_17500666 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13856/2023 | H | 249 | E | 1 | 20230329 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | H | 249 | T | 7 | 20230412 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | H | 249 | L | 11 | 20230217 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | H | 249 | V | 1 | 20221126 |
| EPI_ISL_17530347 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13893/2023 | G | 250 | D | 2 | 20230403 |
| EPI_ISL_10944925 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95010/2022 | G | 250 | W | 3 | 20220301 |
| EPI_ISL_17500666 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13856/2023 | G | 250 | L | 5 | 20230329 |
| EPI_ISL_5128237 | NSP3 | hCoV-19/France/PAC-HCL021149211501/2021 | G | 250 | T | 2 | 20210810 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | G | 250 | Q | 3 | 20220801 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | G | 250 | C | 5 | 20221130 |
| EPI_ISL_19126519 | NSP3 | hCoV-19/USA/GA-EHC-7821I/2024 | G | 250 | stop | 11 | 20240113 |
| EPI_ISL_19763522 | NSP3 | hCoV-19/USA/NV-SNPHL-835051/2025 | G | 250 | R | 1512 | 20250223 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | G | 250 | K | 4 | 20230420 |
| EPI_ISL_7637874 | NSP3 | hCoV-19/Greece/312001/2021 | G | 250 | S | 3 | 20211122 |
| EPI_ISL_19273557 | NSP3 | hCoV-19/USA/CA-GBW-GKPLAAAA38746/2024 | G | 250 | A | 33 | 20240703 |
| EPI_ISL_18255165 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-18/2023 | G | 250 | del | 67 | 20230425 |
| EPI_ISL_19827093 | NSP3 | hCoV-19/Chile/LI-ISPC-25689/2025 | G | 250 | E | 1676 | 20250321 |
| EPI_ISL_5881208 | NSP3 | hCoV-19/Thailand/Kamphaengphet_SEQ19109/2021 | G | 250 | I | 1 | 20211014 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | G | 250 | M | 3 | 20220201 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | G | 250 | N | 9 | 20230412 |
| EPI_ISL_19677044 | NSP3 | hCoV-19/Poland/33WSN2025_wsseol/2024 | G | 250 | V | 1064 | 20241121 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | G | 251 | C | 8 | 20230214 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | G | 251 | D | 24 | 20220601 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | G | 251 | del | 88 | 20240315 |
| EPI_ISL_19817937 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U842-1/2025 | G | 251 | R | 1842 | 20250314 |
| EPI_ISL_19831396 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56896/2025 | G | 251 | E | 1459 | 20250331 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | G | 251 | K | 4 | 20230412 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | G | 251 | P | 1 | 20220117 |
| EPI_ISL_10080768 | NSP3 | hCoV-19/India/KA-SEQ_9863_S273_R1_001/2022 | G | 251 | T | 1 | 20220102 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | G | 251 | S | 3 | 20231007 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | G | 251 | Q | 2 | 20220201 |
| EPI_ISL_10080730 | NSP3 | hCoV-19/India/KA-SEQ_9783_S177_R1_001/2022 | G | 251 | insGVAGALNKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHGG | 1 | 20220103 |
| EPI_ISL_4311886 | NSP3 | hCoV-19/England/PHEC-Z305Z4A2/2021 | G | 251 | Y | 3 | 20210909 |
| EPI_ISL_19745722 | NSP3 | hCoV-19/USA/NY-SUNYQB-X1337660/2025 | G | 251 | A | 13 | 20250124 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | G | 251 | N | 2 | 20230412 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | G | 251 | I | 4 | 20220128 |
| EPI_ISL_19819862 | NSP3 | hCoV-19/Spain/AS-HUCA-232523861/2025 | G | 251 | V | 208 | 20250324 |
| EPI_ISL_16077949 | NSP3 | hCoV-19/Spain/AS-252293720/2022 | G | 251 | stop | 7 | 20221121 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | G | 251 | L | 9 | 20230420 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | G | 252 | L | 1 | 20220210 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | G | 252 | H | 1 | 20221130 |
| EPI_ISL_17302135 | NSP3 | hCoV-19/Germany/MV-UMG-19008442/2021 | G | 252 | insXXL | 1 | 20210502 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | G | 252 | del | 95 | 20240315 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | G | 252 | Y | 1 | 20230420 |
| EPI_ISL_18844887 | NSP3 | hCoV-19/Japan/PG-562144/2023 | G | 252 | V | 74 | 20230807 |
| EPI_ISL_19385867 | NSP3 | hCoV-19/Brazil/BA-LACEN-293861750/2024 | G | 252 | D | 272 | 20240808 |
| EPI_ISL_19697880 | NSP3 | hCoV-19/Singapore/Y25R4MSC78/2025 | G | 252 | S | 564 | 20250116 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | G | 252 | N | 4 | 20230412 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | G | 252 | insLNLM | 1 | 20221229 |
| EPI_ISL_15131716 | NSP3 | hCoV-19/Germany/SN-RKI-I-976293/2022 | G | 252 | insG | 1 | 20220710 |
| EPI_ISL_19633966 | NSP3 | hCoV-19/Canada/AB-ABPHL-128794/2024 | G | 252 | C | 493 | 20241202 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | G | 252 | K | 3 | 20221229 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | G | 252 | T | 7 | 20230412 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | G | 252 | I | 24 | 20220601 |
| EPI_ISL_15889705 | NSP3 | hCoV-19/USA/AK-USAFSAM-S20227/2022 | G | 252 | Q | 2 | 20220816 |
| EPI_ISL_17500666 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13856/2023 | G | 252 | A | 5 | 20230329 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | G | 252 | P | 1 | 20211005 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 252 | E | 2 | 20220210 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | G | 252 | R | 19 | 20230217 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | G | 252 | stop | 12 | 20230214 |
| EPI_ISL_14749442 | NSP3 | hCoV-19/India/OR-ILSGS17659/2022 | G | 252 | M | 7 | 20220706 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | V | 253 | insstopKGKTNSGCstopCSQCLPstopTW | 1 | 20210201 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | V | 253 | insstopKGKTNSGCstopCSQCLPstop | 2 | 20220703 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | V | 253 | stop | 2 | 20211104 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 253 | H | 1 | 20220210 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | V | 253 | Y | 1 | 20210809 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | V | 253 | M | 3 | 20230227 |
| EPI_ISL_15889705 | NSP3 | hCoV-19/USA/AK-USAFSAM-S20227/2022 | V | 253 | Q | 5 | 20220816 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 253 | E | 1 | 20210318 |
| EPI_ISL_18936138 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00045/2023 | V | 253 | S | 7 | 20230410 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | V | 253 | del | 88 | 20240315 |
| EPI_ISL_19707300 | NSP3 | hCoV-19/Canada/NS-NSH-764111/2025 | V | 253 | F | 154 | 20250101 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | V | 253 | K | 1 | 20200923 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | V | 253 | T | 5 | 20231007 |
| EPI_ISL_18540119 | NSP3 | hCoV-19/Denmark/DCGC-663649/2023 | V | 253 | L | 22 | 20231113 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | V | 253 | insstopKRstopTN | 1 | 20210812 |
| EPI_ISL_19008385 | NSP3 | hCoV-19/Brazil/BA-LACEN-293405446/2024 | V | 253 | C | 15 | 20240103 |
| EPI_ISL_19808366 | NSP3 | hCoV-19/Canada/ON-PHL-202504723/2025 | V | 253 | I | 3571 | 20250306 |
| EPI_ISL_17500666 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13856/2023 | V | 253 | D | 15 | 20230329 |
| EPI_ISL_19777558 | NSP3 | hCoV-19/USA/NE-RP251872/2025 | V | 253 | A | 1156 | 20250306 |
| EPI_ISL_17647710 | NSP3 | hCoV-19/South Korea/KDCA233923/2023 | V | 253 | G | 18 | 20230419 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | V | 253 | P | 1 | 20221126 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | A | 254 | R | 3 | 20220117 |
| EPI_ISL_10306138 | NSP3 | hCoV-19/India/KA-CBR-1402CTD089/2022 | A | 254 | stop | 1 | 20220209 |
| EPI_ISL_18832474 | NSP3 | hCoV-19/Spain/MD-HGUGM-64234721/2024 | A | 254 | G | 14 | 20240107 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | A | 254 | Y | 1 | 20220119 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 254 | Q | 5 | 20220210 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | A | 254 | W | 3 | 20220201 |
| EPI_ISL_1167186 | NSP3 | hCoV-19/Egypt/MASRI-C5-003/2020 | A | 254 | M | 1 | 20200525 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | A | 254 | P | 4 | 20230217 |
| EPI_ISL_18255165 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-18/2023 | A | 254 | del | 75 | 20230425 |
| EPI_ISL_19030232 | NSP3 | hCoV-19/USA/FL-CDC-LC1101816/2024 | A | 254 | S | 86 | 20240311 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 254 | D | 2 | 20230217 |
| EPI_ISL_19254101 | NSP3 | hCoV-19/env/Germany/BY-LGL-6273234/2024 | A | 254 | V | 99 | 20240619 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | A | 254 | K | 3 | 20230412 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | A | 254 | N | 2 | 20230420 |
| EPI_ISL_19008385 | NSP3 | hCoV-19/Brazil/BA-LACEN-293405446/2024 | A | 254 | C | 12 | 20240103 |
| EPI_ISL_19254525 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBC89093/2024 | A | 254 | T | 183 | 20240628 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | A | 254 | I | 1 | 20211005 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | A | 254 | E | 33 | 20230227 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | A | 254 | L | 7 | 20220128 |
| EPI_ISL_4311886 | NSP3 | hCoV-19/England/PHEC-Z305Z4A2/2021 | G | 255 | H | 2 | 20210909 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | G | 255 | P | 1 | 20221229 |
| EPI_ISL_19761329 | NSP3 | hCoV-19/Japan/FR049-0153/2025 | G | 255 | E | 2157 | 20250221 |
| EPI_ISL_14607754 | NSP3 | hCoV-19/India/TN-CBR-CL1685/2021 | G | 255 | insTstopA | 2 | 20210705 |
| EPI_ISL_3658974 | NSP3 | hCoV-19/USA/MN-CDC-IBX669453388385/2021 | G | 255 | insGT | 2 | 20210810 |
| EPI_ISL_19823507 | NSP3 | hCoV-19/Spain/GA-CHUAC-13132/2025 | G | 255 | R | 4625 | 20250324 |
| EPI_ISL_19070433 | NSP3 | hCoV-19/env/Germany/BY-LGL-6194282/2024 | G | 255 | stop | 16 | 20240403 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | G | 255 | del | 66 | 20230413 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | G | 255 | Q | 10 | 20230214 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | G | 255 | T | 7 | 20240315 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | G | 255 | L | 2 | 20220117 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | G | 255 | insDATTAYAN | 1 | 20221118 |
| EPI_ISL_18975562 | NSP3 | hCoV-19/USA/UT-UPHL-240207472641/2024 | G | 255 | A | 221 | 20240109 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | G | 255 | K | 3 | 20230217 |
| EPI_ISL_5545977 | NSP3 | hCoV-19/Philippines/PH-PGC-68190/2021 | G | 255 | I | 1 | 20210805 |
| EPI_ISL_5128237 | NSP3 | hCoV-19/France/PAC-HCL021149211501/2021 | G | 255 | D | 1 | 20210810 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | G | 255 | N | 3 | 20230412 |
| EPI_ISL_19784064 | NSP3 | hCoV-19/USA/PA-CDC-LC1134940/2025 | G | 255 | V | 4151 | 20250304 |
| EPI_ISL_19693001 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YEANC/2024 | A | 256 | D | 290 | 20241215 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | A | 256 | E | 1 | 20210806 |
| EPI_ISL_19456799 | NSP3 | hCoV-19/Italy/UMB-LAOP-162-3-22/2024 | A | 256 | S | 397 | 20240930 |
| EPI_ISL_5128237 | NSP3 | hCoV-19/France/PAC-HCL021149211501/2021 | A | 256 | I | 1 | 20210810 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | A | 256 | C | 11 | 20230214 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | A | 256 | del | 60 | 20230413 |
| EPI_ISL_18255165 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-18/2023 | A | 256 | stop | 1 | 20230425 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | A | 256 | M | 6 | 20231007 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 256 | K | 4 | 20221229 |
| EPI_ISL_19088316 | NSP3 | hCoV-19/USA/NY-CDC-LC1103568/2024 | A | 256 | G | 27 | 20240418 |
| EPI_ISL_11051091 | NSP3 | hCoV-19/India/JK-NCDC-4709325/2021 | A | 256 | insSA | 1 | 20210707 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | A | 256 | insSstopIstopstop | 1 | 20210114 |
| EPI_ISL_1167186 | NSP3 | hCoV-19/Egypt/MASRI-C5-003/2020 | A | 256 | N | 1 | 20200525 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | A | 256 | L | 15 | 20230412 |
| EPI_ISL_19826624 | NSP3 | hCoV-19/USA/NY-PRL-250408_81H12/2025 | A | 256 | V | 4073 | 20250402 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | A | 256 | insstopC | 1 | 20210812 |
| EPI_ISL_18607147 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K059903/2023 | A | 256 | F | 5 | 20231115 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | A | 256 | insN | 1 | 20221130 |
| EPI_ISL_19805613 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U772-1/2025 | A | 256 | T | 4131 | 20250225 |
| EPI_ISL_17621090 | NSP3 | hCoV-19/USA/CA-CDC-QDX49458858/2023 | A | 256 | P | 8 | 20230420 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 257 | insQPEEE | 1 | 20221226 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | L | 257 | M | 1 | 20220105 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | L | 257 | K | 5 | 20220601 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | L | 257 | T | 2 | 20220117 |
| EPI_ISL_3631602 | NSP3 | hCoV-19/USA/AZ-ASPHL-4772/2021 | L | 257 | G | 2 | 20210807 |
| EPI_ISL_12319915 | NSP3 | hCoV-19/Turkey/HSGM-GS1726/2022 | L | 257 | S | 9 | 20220401 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 257 | A | 3 | 20230412 |
| EPI_ISL_18699834 | NSP3 | hCoV-19/USA/MN-MDH-38745/2023 | L | 257 | V | 65 | 20231130 |
| EPI_ISL_18933183 | NSP3 | hCoV-19/USA/GA-GPHL-0302/2024 | L | 257 | F | 39 | 20240206 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | L | 257 | P | 5 | 20220128 |
| EPI_ISL_19747125 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00051/2022 | L | 257 | stop | 6 | 20221220 |
| EPI_ISL_15889705 | NSP3 | hCoV-19/USA/AK-USAFSAM-S20227/2022 | L | 257 | E | 1 | 20220816 |
| EPI_ISL_18854592 | NSP3 | hCoV-19/England/CLIMB-CM7YGDIH/2024 | L | 257 | J | 3 | 20240123 |
| EPI_ISL_19228876 | NSP3 | hCoV-19/Australia/NSW-ICPMR-54389/2024 | L | 257 | I | 167 | 20240618 |
| EPI_ISL_3636272 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ13948/2021 | L | 257 | R | 1 | 20210806 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | L | 257 | insstop | 1 | 20210806 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | L | 257 | del | 77 | 20230413 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | L | 257 | N | 5 | 20230420 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | N | 258 | Q | 8 | 20230227 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 258 | E | 2 | 20220210 |
| EPI_ISL_16120995 | NSP3 | hCoV-19/USA/MA-NEIDL-07397/2022 | N | 258 | Y | 1 | 20220708 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | N | 258 | P | 7 | 20230214 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | N | 258 | C | 4 | 20220128 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | N | 258 | insstopNQQWLLMQP | 3 | 20220601 |
| EPI_ISL_17523497 | NSP3 | hCoV-19/USA/TX-HMH-M-127519/2023 | N | 258 | I | 8 | 20230324 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | N | 258 | R | 8 | 20240227 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | N | 258 | H | 6 | 20221226 |
| EPI_ISL_15366514 | NSP3 | hCoV-19/Italy/VEN-IZSVe-22RS8335-15_VR/2022 | N | 258 | T | 42 | 20221003 |
| EPI_ISL_19477090 | NSP3 | hCoV-19/Kuwait/Jaber20520954/2024 | N | 258 | K | 80 | 20240826 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | N | 258 | A | 13 | 20231007 |
| EPI_ISL_19182303 | NSP3 | hCoV-19/Singapore/R28MQ237/2024 | N | 258 | B | 9 | 20240514 |
| EPI_ISL_18743303 | NSP3 | hCoV-19/USA/TX-HMH-M-137138/2024 | N | 258 | F | 6 | 20240101 |
| EPI_ISL_10924623 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11597/2022 | N | 258 | insPE | 2 | 20220226 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | N | 258 | M | 9 | 20221229 |
| EPI_ISL_18914642 | NSP3 | hCoV-19/USA/NY-SUNYQB-X8411/2024 | N | 258 | S | 746 | 20240119 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | N | 258 | G | 2 | 20230412 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | N | 258 | V | 2 | 20230420 |
| EPI_ISL_19262166 | NSP3 | hCoV-19/Ireland/G-LUH-N2688/2024 | N | 258 | D | 171 | 20240626 |
| EPI_ISL_5128237 | NSP3 | hCoV-19/France/PAC-HCL021149211501/2021 | N | 258 | L | 2 | 20210810 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | N | 258 | del | 78 | 20230413 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | K | 259 | insstopNQQWLLMQPM | 2 | 20220201 |
| EPI_ISL_19829451 | NSP3 | hCoV-19/Brazil/PB-IEC-011002/2025 | K | 259 | R | 446 | 20250226 |
| EPI_ISL_19589325 | NSP3 | hCoV-19/USA/IA-SHL-2532387/2024 | K | 259 | E | 240 | 20241122 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | K | 259 | S | 6 | 20211104 |
| EPI_ISL_19785832 | NSP3 | hCoV-19/Germany/ST-RKI-I-1147920/2025 | K | 259 | N | 910 | 20250220 |
| EPI_ISL_17302146 | NSP3 | hCoV-19/Germany/MV-UMG-19013344/2021 | K | 259 | insGRW | 2 | 20210503 |
| EPI_ISL_18923235 | NSP3 | hCoV-19/USA/MS-MSPHL-0140/2024 | K | 259 | stop | 13 | 20240209 |
| EPI_ISL_18322287 | NSP3 | hCoV-19/USA/TX-HMH-M-133591/2023 | K | 259 | L | 3 | 20230908 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | K | 259 | P | 2 | 20220117 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | K | 259 | Q | 1 | 20200701 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | K | 259 | V | 2 | 20230420 |
| EPI_ISL_17302135 | NSP3 | hCoV-19/Germany/MV-UMG-19008442/2021 | K | 259 | W | 1 | 20210502 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | K | 259 | A | 4 | 20230412 |
| EPI_ISL_19178848 | NSP3 | hCoV-19/Japan/TKYnat16985/2024 | K | 259 | T | 60 | 20240505 |
| EPI_ISL_19283658 | NSP3 | hCoV-19/Italy/MAR_UNIVPM_Marche_46262-27-01-24_WG/2024 | K | 259 | del | 54 | 20240127 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | K | 259 | G | 14 | 20230412 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 259 | Y | 2 | 20220210 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | K | 259 | D | 8 | 20221229 |
| EPI_ISL_19764223 | NSP3 | hCoV-19/Japan/FR035-0099/2025 | K | 259 | M | 111 | 20250214 |
| EPI_ISL_19665381 | NSP3 | hCoV-19/Mexico/CMX-INMEGEN-124-272/2024 | A | 260 | S | 173 | 20240725 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | A | 260 | insAT | 1 | 20220119 |
| EPI_ISL_18992733 | NSP3 | hCoV-19/Chile/VS-15689/2024 | A | 260 | T | 882 | 20240305 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | A | 260 | stop | 2 | 20200923 |
| EPI_ISL_16962581 | NSP3 | hCoV-19/USA/GA-CDC-QDX46395556/2023 | A | 260 | I | 2 | 20230203 |
| EPI_ISL_18322287 | NSP3 | hCoV-19/USA/TX-HMH-M-133591/2023 | A | 260 | L | 11 | 20230908 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 260 | insCSAY | 1 | 20230217 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | A | 260 | M | 1 | 20220105 |
| EPI_ISL_9682502 | NSP3 | hCoV-19/Slovakia/2910/2022 | A | 260 | R | 1 | 20220111 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | A | 260 | del | 49 | 20230413 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | A | 260 | P | 8 | 20230227 |
| EPI_ISL_19499259 | NSP3 | hCoV-19/USA/TX-HMH-M-146648/2024 | A | 260 | V | 690 | 20240929 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | A | 260 | G | 15 | 20230412 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | A | 260 | insF | 1 | 20220105 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | A | 260 | H | 9 | 20221229 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | A | 260 | C | 2 | 20230217 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 260 | K | 22 | 20230217 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | A | 260 | insstop | 1 | 20210809 |
| EPI_ISL_15889705 | NSP3 | hCoV-19/USA/AK-USAFSAM-S20227/2022 | A | 260 | Q | 2 | 20220816 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | A | 260 | F | 6 | 20220601 |
| EPI_ISL_18694879 | NSP3 | hCoV-19/Brazil/PE-FIOCRUZ-IAM15827/2023 | A | 260 | D | 223 | 20231210 |
| EPI_ISL_18226339 | NSP3 | hCoV-19/env/India/MH-FMR_D3-51b/2023 | T | 261 | stop | 3 | 20230227 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | T | 261 | F | 1 | 20210813 |
| EPI_ISL_17302109 | NSP3 | hCoV-19/Germany/MV-UMG-19008335/2021 | T | 261 | insWVL | 2 | 20210503 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | T | 261 | insstopCSQCLPstopTW | 1 | 20211104 |
| EPI_ISL_17302109 | NSP3 | hCoV-19/Germany/MV-UMG-19008335/2021 | T | 261 | R | 2 | 20210503 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | T | 261 | C | 2 | 20211104 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | T | 261 | L | 30 | 20231007 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | T | 261 | W | 7 | 20230214 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | T | 261 | V | 20 | 20220509 |
| EPI_ISL_2268475 | NSP3 | hCoV-19/USA/OH-CDC-QDX24713530/2021 | T | 261 | insT | 3 | 20210505 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | T | 261 | K | 1 | 20220117 |
| EPI_ISL_18743303 | NSP3 | hCoV-19/USA/TX-HMH-M-137138/2024 | T | 261 | P | 12 | 20240101 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | T | 261 | G | 1 | 20230412 |
| EPI_ISL_19111137 | NSP3 | hCoV-19/Japan/PG-577518/2023 | T | 261 | A | 123 | 20231005 |
| EPI_ISL_19560609 | NSP3 | hCoV-19/Brazil/SP-IAL-357893613/2024 | T | 261 | S | 98 | 20240812 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | T | 261 | del | 77 | 20230413 |
| EPI_ISL_17829490 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00001255/2022 | T | 261 | I | 18 | 20220903 |
| EPI_ISL_8049927 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6790/2021 | T | 261 | D | 1 | 20211122 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | T | 261 | E | 1 | 20221130 |
| EPI_ISL_18252137 | NSP3 | hCoV-19/USA/ND-NDDH-25006/2023 | T | 261 | N | 17 | 20230822 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | T | 261 | H | 1 | 20230412 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 261 | Q | 1 | 20220210 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | T | 261 | Y | 3 | 20220630 |
| EPI_ISL_16848765 | NSP3 | hCoV-19/France/BFC-IPP02596/2023 | N | 262 | H | 8 | 20230109 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | N | 262 | M | 1 | 20200923 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | N | 262 | P | 1 | 20230420 |
| EPI_ISL_19305932 | NSP3 | hCoV-19/Wales/CLIMB-CM7YMX1S/2024 | N | 262 | B | 14 | 20240719 |
| EPI_ISL_479751 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0080/2020 | N | 262 | insLSLIHISEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTN | 1 | 20200617 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | N | 262 | stop | 2 | 20220630 |
| EPI_ISL_19818370 | NSP3 | hCoV-19/France/IDF-RELAB-IPP03656/2025 | N | 262 | S | 2375 | 20250304 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | N | 262 | E | 2 | 20220213 |
| EPI_ISL_8193609 | NSP3 | hCoV-19/Egypt/NRC-6072/2020 | N | 262 | Q | 1 | 20200627 |
| EPI_ISL_19549144 | NSP3 | hCoV-19/Canada/AB-ABPHL-126649/2024 | N | 262 | D | 677 | 20241101 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | N | 262 | G | 1 | 20230412 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | N | 262 | L | 12 | 20220601 |
| EPI_ISL_19551045 | NSP3 | hCoV-19/Chile/VS-ISPC-82886/2024 | N | 262 | T | 58 | 20241012 |
| EPI_ISL_19270334 | NSP3 | hCoV-19/Spain/PV-HUD-39292339/2024 | N | 262 | K | 118 | 20240630 |
| EPI_ISL_18610734 | NSP3 | hCoV-19/Canada/ON-PHL-23-45552/2023 | N | 262 | Y | 46 | 20231128 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | N | 262 | R | 12 | 20231007 |
| EPI_ISL_16859260 | NSP3 | hCoV-19/USA/MI-MDHHS-SC43492/2022 | N | 262 | I | 11 | 20221220 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | N | 262 | del | 72 | 20230413 |
| EPI_ISL_19803993 | NSP3 | hCoV-19/USA/WI-WSLH-2500490/2025 | N | 263 | D | 329 | 20250124 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | N | 263 | G | 1 | 20230412 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | N | 263 | Q | 3 | 20220630 |
| EPI_ISL_16547710 | NSP3 | hCoV-19/Denmark/DCGC-637858/2023 | N | 263 | B | 13 | 20230112 |
| EPI_ISL_17290960 | NSP3 | hCoV-19/USA/AK-PHL24469/2023 | N | 263 | I | 5 | 20230124 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | N | 263 | del | 72 | 20231007 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | N | 263 | P | 19 | 20220509 |
| EPI_ISL_5437220 | NSP3 | hCoV-19/Sweden/UUH-000200008713/2021 | N | 263 | A | 4 | 20210506 |
| EPI_ISL_18911334 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS-104249/2024 | N | 263 | H | 10 | 20240118 |
| EPI_ISL_19786022 | NSP3 | hCoV-19/Brazil/BA-LACENBA-294216901/2025 | N | 263 | S | 688 | 20250128 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | N | 263 | W | 8 | 20221229 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | N | 263 | R | 10 | 20230214 |
| EPI_ISL_18220933 | NSP3 | hCoV-19/Spain/CL-43116/2023 | N | 263 | T | 248 | 20230808 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | N | 263 | F | 1 | 20220210 |
| EPI_ISL_1167125 | NSP3 | hCoV-19/Senegal/SN-MBO-201859/2021 | N | 263 | insN | 1 | 20210127 |
| EPI_ISL_4311886 | NSP3 | hCoV-19/England/PHEC-Z305Z4A2/2021 | N | 263 | stop | 2 | 20210909 |
| EPI_ISL_17825738 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00005816/2022 | N | 263 | Y | 17 | 20221228 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | N | 263 | M | 5 | 20220128 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | N | 263 | V | 1 | 20221229 |
| EPI_ISL_19478146 | NSP3 | hCoV-19/Italy/APU-IZSPB-PT8802/2024 | N | 263 | K | 1044 | 20241004 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | N | 263 | E | 5 | 20220213 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | N | 263 | L | 5 | 20230412 |
| EPI_ISL_15974272 | NSP3 | hCoV-19/Spain/AS-252285211/2022 | A | 264 | G | 78 | 20221025 |
| EPI_ISL_11736182 | NSP3 | hCoV-19/India/KA-SLS-SEQ-4143/2021 | A | 264 | R | 2 | 20210828 |
| EPI_ISL_6917490 | NSP3 | hCoV-19/England/BRBR-2BE0700/2021 | A | 264 | P | 5 | 20211124 |
| EPI_ISL_18688184 | NSP3 | hCoV-19/England/CLIMB-CM7YKUUW/2023 | A | 264 | S | 77 | 20231213 |
| EPI_ISL_1663536 | NSP3 | hCoV-19/India/ILSGS00963/2020 | A | 264 | K | 1 | 20201226 |
| EPI_ISL_19808443 | NSP3 | hCoV-19/Canada/ON-PHL-202504797/2025 | A | 264 | V | 3243 | 20250308 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 264 | I | 6 | 20221229 |
| EPI_ISL_19793974 | NSP3 | hCoV-19/Australia/QLD0x0153B1/2025 | A | 264 | T | 1415 | 20250307 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | A | 264 | H | 1 | 20230412 |
| EPI_ISL_19566577 | NSP3 | hCoV-19/Germany/BE-ChVirD24-22415/2024 | A | 264 | D | 192 | 20241105 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | A | 264 | del | 82 | 20231007 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | A | 264 | C | 11 | 20230214 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | A | 264 | stop | 1 | 20210815 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 264 | L | 4 | 20220210 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | A | 264 | M | 13 | 20220601 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | A | 264 | Y | 2 | 20230412 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | A | 264 | N | 2 | 20220210 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | M | 265 | W | 1 | 20200923 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 265 | Q | 3 | 20220210 |
| EPI_ISL_4311886 | NSP3 | hCoV-19/England/PHEC-Z305Z4A2/2021 | M | 265 | stop | 2 | 20210909 |
| EPI_ISL_17998355 | NSP3 | hCoV-19/USA/CA-CDPH-500117054/2023 | M | 265 | T | 10 | 20230518 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | M | 265 | Y | 1 | 20210813 |
| EPI_ISL_16552095 | NSP3 | hCoV-19/Austria/AGES-195885/2022 | M | 265 | D | 2 | 20220719 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | M | 265 | G | 1 | 20221229 |
| EPI_ISL_19666616 | NSP3 | hCoV-19/Singapore/R63MQ12/2024 | M | 265 | L | 221 | 20241118 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | M | 265 | A | 2 | 20210424 |
| EPI_ISL_19351633 | NSP3 | hCoV-19/Netherlands/GE-RIVM-140777/2024 | M | 265 | V | 321 | 20240728 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | M | 265 | P | 1 | 20210318 |
| EPI_ISL_19602870 | NSP3 | hCoV-19/Denmark/DCGC-691014/2024 | M | 265 | I | 3303 | 20241125 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | M | 265 | C | 12 | 20230214 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | M | 265 | del | 76 | 20231007 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | M | 265 | K | 5 | 20230420 |
| EPI_ISL_12952049 | NSP3 | hCoV-19/Japan/PG-231159/2022 | M | 265 | R | 4 | 20220407 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | M | 265 | insstop | 1 | 20210813 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | M | 265 | E | 13 | 20220601 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | M | 265 | insITstopL | 2 | 20220117 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | M | 265 | H | 3 | 20220630 |
| EPI_ISL_13282071 | NSP3 | hCoV-19/USA/ID-IBL-656837/2020 | Q | 266 | insstopIstopstop | 1 | 20200915 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | Q | 266 | Y | 5 | 20220829 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | Q | 266 | M | 1 | 20211005 |
| EPI_ISL_18375437 | NSP3 | hCoV-19/USA/NJ-CDC-QDX84402426/2023 | Q | 266 | R | 59 | 20230826 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | Q | 266 | P | 2 | 20210809 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | Q | 266 | T | 1 | 20210818 |
| EPI_ISL_16552095 | NSP3 | hCoV-19/Austria/AGES-195885/2022 | Q | 266 | I | 3 | 20220719 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | Q | 266 | S | 2 | 20210424 |
| EPI_ISL_10944925 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95010/2022 | Q | 266 | insSstopIstopstop | 3 | 20220301 |
| EPI_ISL_9029244 | NSP3 | hCoV-19/USA/FL-BPHL-0098/2022 | Q | 266 | H | 5 | 20220102 |
| EPI_ISL_19387949 | NSP3 | hCoV-19/Wales/WSI-326F413A/2023 | Q | 266 | stop | 11 | 20230301 |
| EPI_ISL_18875861 | NSP3 | hCoV-19/Russia/RARI-2372/2023 | Q | 266 | L | 6 | 20230929 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | Q | 266 | del | 97 | 20230413 |
| EPI_ISL_13307931 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2185/2022 | Q | 266 | A | 3 | 20220528 |
| EPI_ISL_18489900 | NSP3 | hCoV-19/Bulgaria/21BG-NC_023707_R42/2023 | Q | 266 | K | 35 | 20231016 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | Q | 266 | E | 12 | 20220601 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | Q | 266 | V | 31 | 20221229 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | Q | 266 | N | 2 | 20230412 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 267 | N | 1 | 20210318 |
| EPI_ISL_19784751 | NSP3 | hCoV-19/Japan/FR021-0208/2025 | V | 267 | I | 754 | 20250220 |
| EPI_ISL_14433689 | NSP3 | hCoV-19/Finland/THL-202216584/2022 | V | 267 | D | 20 | 20220722 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | V | 267 | del | 70 | 20230413 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | V | 267 | M | 3 | 20220117 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | V | 267 | K | 1 | 20210424 |
| EPI_ISL_18357090 | NSP3 | hCoV-19/USA/NY-NYULH-16576/2023 | V | 267 | L | 60 | 20230927 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | V | 267 | E | 3 | 20210817 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | V | 267 | S | 8 | 20230214 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | V | 267 | C | 3 | 20210813 |
| EPI_ISL_19095522 | NSP3 | hCoV-19/Netherlands/NH-RIVM-138412/2024 | V | 267 | G | 12 | 20240126 |
| EPI_ISL_19817961 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U868-1/2025 | V | 267 | F | 1324 | 20250317 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | V | 267 | Y | 2 | 20230412 |
| EPI_ISL_19382414 | NSP3 | hCoV-19/Canada/AB-ABPHL-122109/2024 | V | 267 | A | 105 | 20240822 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 268 | S | 9 | 20220210 |
| EPI_ISL_18528902 | NSP3 | hCoV-19/USA/AZ-CDC-LC1068943/2023 | E | 268 | V | 32 | 20231031 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | E | 268 | Q | 14 | 20230220 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | E | 268 | L | 24 | 20230214 |
| EPI_ISL_19548339 | NSP3 | hCoV-19/USA/NC-WFSM-1085-10907/2024 | E | 268 | A | 75 | 20240906 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | E | 268 | P | 5 | 20231007 |
| EPI_ISL_960833 | NSP3 | hCoV-19/Belgium/UZA-UA-4922/2021 | E | 268 | M | 1 | 20210113 |
| EPI_ISL_17105229 | NSP3 | hCoV-19/England/BRBR-326EA8AB/2023 | E | 268 | stop | 8 | 20230228 |
| EPI_ISL_10944925 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95010/2022 | E | 268 | H | 6 | 20220301 |
| EPI_ISL_8049927 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6790/2021 | E | 268 | insLR | 1 | 20211122 |
| EPI_ISL_17598830 | NSP3 | hCoV-19/England/PHEC-YYEIO8X/2023 | E | 268 | Z | 21 | 20230417 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | E | 268 | del | 67 | 20230413 |
| EPI_ISL_18645270 | NSP3 | hCoV-19/Canada/ON-PHL-23-46382/2023 | E | 268 | G | 259 | 20231204 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | E | 268 | N | 21 | 20220509 |
| EPI_ISL_19642052 | NSP3 | hCoV-19/USA/CA-PFZ01184/2024 | E | 268 | D | 1456 | 20240907 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | E | 268 | F | 9 | 20221229 |
| EPI_ISL_15499263 | NSP3 | hCoV-19/USA/NY-CDC-LC0914134/2022 | E | 268 | K | 22 | 20221009 |
| EPI_ISL_10858419 | NSP3 | hCoV-19/Turkey/HSGM-G2218/2022 | S | 269 | D | 3 | 20220217 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | S | 269 | N | 7 | 20230412 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | S | 269 | del | 90 | 20230413 |
| EPI_ISL_19780642 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13618/2024 | S | 269 | T | 31 | 20241112 |
| EPI_ISL_19361522 | NSP3 | hCoV-19/env/Ukraine/84286/2023 | S | 269 | P | 13 | 20231207 |
| EPI_ISL_19507697 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293263/2024 | S | 269 | A | 32 | 20241011 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 269 | G | 3 | 20220210 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | S | 269 | E | 8 | 20230420 |
| EPI_ISL_17275342 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45867/2023 | S | 269 | insC | 1 | 20230217 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | S | 269 | stop | 9 | 20221229 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | S | 269 | H | 3 | 20220117 |
| EPI_ISL_14552885 | NSP3 | hCoV-19/USA/TX-HMH-M-111798/2022 | S | 269 | F | 36 | 20220809 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | S | 269 | L | 6 | 20210809 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | S | 269 | M | 2 | 20220128 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | S | 269 | Q | 11 | 20220601 |
| EPI_ISL_2896201 | NSP3 | hCoV-19/Indonesia/SU-NIHRD-WGS08023/2021 | S | 269 | Y | 1 | 20210626 |
| EPI_ISL_18905687 | NSP3 | hCoV-19/USA/NV-NSPHL-S006381/2023 | S | 269 | C | 13 | 20231214 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | S | 269 | K | 10 | 20230214 |
| EPI_ISL_10045295 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344412/2022 | D | 270 | T | 1 | 20220207 |
| EPI_ISL_9709923 | NSP3 | hCoV-19/Chile/RM-19146/2022 | D | 270 | I | 3 | 20220130 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | D | 270 | H | 7 | 20221229 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | D | 270 | del | 105 | 20240524 |
| EPI_ISL_19548897 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-105809/2024 | D | 270 | A | 259 | 20241003 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | D | 270 | insstopIstopstopLH | 1 | 20210813 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 270 | K | 3 | 20220210 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | D | 270 | stop | 13 | 20230214 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | D | 270 | S | 3 | 20221130 |
| EPI_ISL_19090615 | NSP3 | hCoV-19/Japan/FR021-0297/2024 | D | 270 | E | 86 | 20240415 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | D | 270 | P | 6 | 20230220 |
| EPI_ISL_19027620 | NSP3 | hCoV-19/USA/CT-Yale-25688/2024 | D | 270 | Y | 118 | 20240222 |
| EPI_ISL_18726232 | NSP3 | hCoV-19/Singapore/R1MQ164/2024 | D | 270 | B | 27 | 20240102 |
| EPI_ISL_18518993 | NSP3 | hCoV-19/USA/IL-RIPHL_110625_G/2023 | D | 270 | V | 42 | 20231019 |
| EPI_ISL_5462934 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702444172/2021 | D | 270 | Q | 2 | 20211005 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | D | 270 | L | 4 | 20220210 |
| EPI_ISL_19503051 | NSP3 | hCoV-19/Russia/SPE-RII-MH198547S/2024 | D | 270 | G | 465 | 20240828 |
| EPI_ISL_19333373 | NSP3 | hCoV-19/USA/CO-CDPHE-42084923/2024 | D | 270 | N | 1343 | 20240709 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | D | 271 | stop | 9 | 20230220 |
| EPI_ISL_19675866 | NSP3 | hCoV-19/Canada/ON-PHL-202501578/2025 | D | 271 | V | 16 | 20250111 |
| EPI_ISL_1097310 | NSP3 | hCoV-19/Belgium/UZA-UA-CV0614677276/2021 | D | 271 | C | 1 | 20210126 |
| EPI_ISL_18964506 | NSP3 | hCoV-19/USA/CA-CDPH-500134137/2024 | D | 271 | B | 12 | 20240125 |
| EPI_ISL_19697137 | NSP3 | hCoV-19/Brazil/RS-FIOCRUZ-13266/2024 | D | 271 | Y | 285 | 20241216 |
| EPI_ISL_19171881 | NSP3 | hCoV-19/Hong Kong/HK-HKPU-PU23MC544589/2023 | D | 271 | H | 20 | 20230623 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | D | 271 | K | 4 | 20220117 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | D | 271 | del | 129 | 20240524 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | D | 271 | P | 11 | 20220601 |
| EPI_ISL_19532855 | NSP3 | hCoV-19/Canada/AB-ABPHL-126185/2024 | D | 271 | N | 356 | 20241027 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | D | 271 | insC | 1 | 20210806 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | D | 271 | L | 6 | 20221229 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | D | 271 | I | 6 | 20230420 |
| EPI_ISL_12294090 | NSP3 | hCoV-19/Thailand/NIC_BKK_16830/2022 | D | 271 | T | 5 | 20220326 |
| EPI_ISL_19810703 | NSP3 | hCoV-19/Sweden/N-2A948158521/2025 | D | 271 | G | 864 | 20250221 |
| EPI_ISL_19741582 | NSP3 | hCoV-19/USA/OR-OSPHL10162/2025 | D | 271 | E | 125 | 20250202 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | D | 271 | S | 4 | 20210813 |
| EPI_ISL_2380075 | NSP3 | hCoV-19/Egypt/NRC-6050/2020 | D | 271 | insLHG | 1 | 20200624 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | D | 271 | M | 1 | 20221228 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | D | 271 | R | 1 | 20210817 |
| EPI_ISL_19557434 | NSP3 | hCoV-19/France/IDF-RELAB-IPP12459/2024 | D | 271 | A | 159 | 20240917 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | Y | 272 | del | 139 | 20240524 |
| EPI_ISL_2375846 | NSP3 | hCoV-19/Brazil/RS-LMM54273/2021 | Y | 272 | S | 1 | 20210419 |
| EPI_ISL_19806835 | NSP3 | hCoV-19/Spain/CL-UCHV-49909/2025 | Y | 272 | H | 862 | 20250211 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | Y | 272 | V | 2 | 20230412 |
| EPI_ISL_7507369 | NSP3 | hCoV-19/USA/CA-CSMC19/2021 | Y | 272 | K | 1 | 20210630 |
| EPI_ISL_17142640 | NSP3 | hCoV-19/USA/MD-CDC-QDX46944922/2023 | Y | 272 | C | 55 | 20230218 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | Y | 272 | N | 7 | 20230412 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | Y | 272 | M | 1 | 20210809 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | Y | 272 | insstopQCHASstopIstopstopL | 5 | 20230214 |
| EPI_ISL_9519933 | NSP3 | hCoV-19/France/IDF-HMN-22012240892/2022 | Y | 272 | A | 8 | 20220124 |
| EPI_ISL_19323974 | NSP3 | hCoV-19/USA/MS-MSPHL-0250/2024 | Y | 272 | D | 10 | 20240717 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | Y | 272 | R | 2 | 20220213 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | Y | 272 | G | 1 | 20210428 |
| EPI_ISL_13802965 | NSP3 | hCoV-19/Mexico/BCS_LANGEBIO_IMSS_63235_NC/2022 | Y | 272 | stop | 18 | 20220621 |
| EPI_ISL_17275342 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45867/2023 | Y | 272 | F | 7 | 20230217 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Y | 272 | Q | 2 | 20220210 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | Y | 272 | T | 11 | 20221229 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | Y | 272 | I | 11 | 20230220 |
| EPI_ISL_10944925 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95010/2022 | Y | 272 | W | 10 | 20220301 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | Y | 272 | L | 5 | 20221118 |
| EPI_ISL_12585722 | NSP3 | hCoV-19/Pakistan/AKU-MARCH-R2-MIN-08/2021 | Y | 272 | E | 1 | 20211222 |
| EPI_ISL_19782649 | NSP3 | hCoV-19/USA/NC-UM-G25Y06U5/2025 | I | 273 | M | 944 | 20250114 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | I | 273 | C | 2 | 20221228 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | I | 273 | R | 9 | 20230220 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | I | 273 | F | 1 | 20221229 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | I | 273 | S | 1 | 20231121 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | I | 273 | A | 3 | 20230420 |
| EPI_ISL_12585722 | NSP3 | hCoV-19/Pakistan/AKU-MARCH-R2-MIN-08/2021 | I | 273 | G | 1 | 20211222 |
| EPI_ISL_8807020 | NSP3 | hCoV-19/India/GA-NCCS-3055100257046/2021 | I | 273 | insR | 3 | 20211006 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | I | 273 | stop | 8 | 20211219 |
| EPI_ISL_19779668 | NSP3 | hCoV-19/Wales/CLIMB-CM7YEGDQ/2025 | I | 273 | V | 20811 | 20250226 |
| EPI_ISL_19788911 | NSP3 | hCoV-19/env/Germany/BY-LGL-6511732/2025 | I | 273 | L | 90 | 20250226 |
| EPI_ISL_12581347 | NSP3 | hCoV-19/Turkey/HSGM-GS2286/2022 | I | 273 | Q | 1 | 20220405 |
| EPI_ISL_17145526 | NSP3 | hCoV-19/USA/WV-WV130417/2022 | I | 273 | N | 2 | 20220215 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | I | 273 | E | 1 | 20210424 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | I | 273 | del | 139 | 20240524 |
| EPI_ISL_9903049 | NSP3 | hCoV-19/Denmark/DCGC-365867/2022 | I | 273 | J | 5 | 20220119 |
| EPI_ISL_1167186 | NSP3 | hCoV-19/Egypt/MASRI-C5-003/2020 | I | 273 | Y | 1 | 20200525 |
| EPI_ISL_19564336 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08955/2024 | I | 273 | T | 658 | 20241113 |
| EPI_ISL_17199727 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-0269/2023 | I | 273 | K | 9 | 20230220 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | I | 273 | H | 5 | 20230214 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | A | 274 | insstopL | 1 | 20210809 |
| EPI_ISL_19562792 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-143276/2024 | A | 274 | S | 675 | 20241017 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | A | 274 | N | 2 | 20230420 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | A | 274 | I | 2 | 20231121 |
| EPI_ISL_19674270 | NSP3 | hCoV-19/Australia/QLD0x015047/2024 | A | 274 | T | 846 | 20241230 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | A | 274 | E | 6 | 20220829 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | A | 274 | L | 23 | 20230220 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | A | 274 | M | 1 | 20210818 |
| EPI_ISL_19812001 | NSP3 | hCoV-19/Australia/QLD0x015438/2025 | A | 274 | V | 2048 | 20250312 |
| EPI_ISL_7507369 | NSP3 | hCoV-19/USA/CA-CSMC19/2021 | A | 274 | F | 1 | 20210630 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | A | 274 | del | 97 | 20240524 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | A | 274 | Q | 3 | 20211219 |
| EPI_ISL_8146146 | NSP3 | hCoV-19/Sweden/UUH-500000066657SP/2021 | A | 274 | insXXX | 1 | 20211209 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | A | 274 | insLQQCHASstopIstopstopLHI | 1 | 20210812 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | A | 274 | P | 4 | 20230412 |
| EPI_ISL_17275345 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45871/2023 | A | 274 | G | 8 | 20230217 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | A | 274 | W | 4 | 20210813 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 274 | R | 9 | 20221229 |
| EPI_ISL_12583857 | NSP3 | hCoV-19/Turkey/HSGM-GS2712/2022 | A | 274 | H | 3 | 20220407 |
| EPI_ISL_19629851 | NSP3 | hCoV-19/USA/NY-URMC-O7S1T114-1/2024 | A | 274 | D | 71 | 20240725 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | T | 275 | K | 3 | 20230420 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | T | 275 | del | 70 | 20240524 |
| EPI_ISL_19784501 | NSP3 | hCoV-19/Australia/QLD0x015367/2025 | T | 275 | N | 410 | 20250227 |
| EPI_ISL_19750200 | NSP3 | hCoV-19/USA/CA-CDC-2-8210405/2024 | T | 275 | S | 18 | 20241024 |
| EPI_ISL_19811880 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11143/2025 | T | 275 | A | 4245 | 20250314 |
| EPI_ISL_2166544 | NSP3 | hCoV-19/Canada/AB-ABPHL-08157/2021 | T | 275 | insIAI | 1 | 20210303 |
| EPI_ISL_19823379 | NSP3 | hCoV-19/USA/NY-SUNYQB-X3683082/2025 | T | 275 | I | 1652 | 20250321 |
| EPI_ISL_6599853 | NSP3 | hCoV-19/Thailand/001/2021 | T | 275 | P | 3 | 20211021 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | T | 275 | L | 37 | 20230220 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | T | 275 | F | 1 | 20221228 |
| EPI_ISL_10057479 | NSP3 | hCoV-19/USA/ID-IBL-789587/2022 | T | 275 | M | 3 | 20220126 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 275 | G | 3 | 20220210 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | T | 275 | Y | 2 | 20200729 |
| EPI_ISL_10944925 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95010/2022 | T | 275 | stop | 3 | 20220301 |
| EPI_ISL_8221795 | NSP3 | hCoV-19/Germany/SH-RKI-I-389845/2021 | T | 275 | insM | 1 | 20211213 |
| EPI_ISL_19725327 | NSP3 | hCoV-19/Spain/PV-HUD-70181352/2025 | T | 275 | D | 10 | 20250207 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | T | 275 | V | 5 | 20230412 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | T | 275 | insstopLL | 1 | 20210804 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | T | 275 | insL | 7 | 20220601 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | T | 275 | E | 6 | 20220829 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | T | 275 | C | 3 | 20211219 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | N | 276 | P | 2 | 20210817 |
| EPI_ISL_11220149 | NSP3 | hCoV-19/France/BFC-HMN-22032070055/2022 | N | 276 | G | 2 | 20220227 |
| EPI_ISL_19789292 | NSP3 | hCoV-19/Greece/PHLnetwork_6417/2024 | N | 276 | S | 933 | 20241211 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | N | 276 | I | 201 | 20231121 |
| EPI_ISL_12585722 | NSP3 | hCoV-19/Pakistan/AKU-MARCH-R2-MIN-08/2021 | N | 276 | Q | 1 | 20211222 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | N | 276 | A | 2 | 20210428 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | N | 276 | V | 3 | 20230412 |
| EPI_ISL_19369135 | NSP3 | hCoV-19/Japan/FR057-0082/2024 | N | 276 | B | 9 | 20240809 |
| EPI_ISL_19619046 | NSP3 | hCoV-19/Egypt/CPHL-EGY24410/2024 | N | 276 | T | 75 | 20240926 |
| EPI_ISL_19806333 | NSP3 | hCoV-19/Canada/ON-HRL-20251018767457-v1/2025 | N | 276 | K | 1989 | 20250215 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | N | 276 | insASstopIstopstopLHSYY | 1 | 20211019 |
| EPI_ISL_7727220 | NSP3 | hCoV-19/England/PHEP-YYNQESP/2021 | N | 276 | F | 2 | 20211201 |
| EPI_ISL_19807536 | NSP3 | hCoV-19/Canada/ON-PHL-202504092-v2/2025 | N | 276 | R | 1256 | 20250216 |
| EPI_ISL_18139458 | NSP3 | hCoV-19/Egypt/CPHL-EGY23955/2023 | N | 276 | C | 1 | 20230318 |
| EPI_ISL_1076023 | NSP3 | hCoV-19/Botswana/R04B21_BHP_363933/2021 | N | 276 | E | 1 | 20210211 |
| EPI_ISL_18854550 | NSP3 | hCoV-19/England/CLIMB-CM7Y8O79/2024 | N | 276 | D | 73 | 20240118 |
| EPI_ISL_19317124 | NSP3 | hCoV-19/USA/AZ-CDC-LC1111240/2024 | N | 276 | del | 179 | 20240723 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | N | 276 | Y | 8 | 20231007 |
| EPI_ISL_16357323 | NSP3 | hCoV-19/Switzerland/ZH-UZH-IMV-3ba67f05/2022 | N | 276 | M | 18 | 20221205 |
| EPI_ISL_14171270 | NSP3 | hCoV-19/France/ARA-HCL722003603301/2022 | N | 276 | H | 12 | 20220718 |
| EPI_ISL_19019299 | NSP3 | hCoV-19/Pakistan/KMU_PHRL-1212/2024 | G | 277 | V | 87 | 20240312 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | G | 277 | C | 1 | 20210817 |
| EPI_ISL_11468166 | NSP3 | hCoV-19/Brazil/RN-ITV-179127/2021 | G | 277 | L | 1 | 20210419 |
| EPI_ISL_14971531 | NSP3 | hCoV-19/USA/UT-UPHL-220912772695/2022 | G | 277 | stop | 16 | 20220823 |
| EPI_ISL_16465888 | NSP3 | hCoV-19/USA/TN-2-22903-5/2020 | G | 277 | insVIstop | 1 | 20201120 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | G | 277 | insSstopIstopstopLHSYstopW | 1 | 20211219 |
| EPI_ISL_18063110 | NSP3 | hCoV-19/South Korea/KDCA254481/2023 | G | 277 | A | 96 | 20230712 |
| EPI_ISL_19498141 | NSP3 | hCoV-19/Denmark/DCGC-689795/2024 | G | 277 | R | 859 | 20241007 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | G | 277 | H | 1 | 20211005 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | G | 277 | N | 48 | 20221213 |
| EPI_ISL_10944925 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95010/2022 | G | 277 | insWstopL | 5 | 20220301 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | G | 277 | T | 8 | 20221229 |
| EPI_ISL_19807536 | NSP3 | hCoV-19/Canada/ON-PHL-202504092-v2/2025 | G | 277 | del | 1542 | 20250216 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | G | 277 | K | 2 | 20230412 |
| EPI_ISL_477221 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0019/2020 | G | 277 | S | 1 | 20200611 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | G | 277 | Y | 2 | 20230420 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | G | 277 | P | 7 | 20231007 |
| EPI_ISL_19408464 | NSP3 | hCoV-19/USA/CA-CDPH-6000020628/2024 | G | 277 | E | 984 | 20240817 |
| EPI_ISL_16357323 | NSP3 | hCoV-19/Switzerland/ZH-UZH-IMV-3ba67f05/2022 | G | 277 | D | 21 | 20221205 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | G | 277 | M | 16 | 20230220 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | P | 278 | K | 5 | 20230412 |
| EPI_ISL_19832664 | NSP3 | hCoV-19/Canada/BC-BCCDC-771190/2025 | P | 278 | A | 73 | 20250307 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | P | 278 | D | 2 | 20211005 |
| EPI_ISL_18663483 | NSP3 | hCoV-19/Poland/Kce-1361/2023 | P | 278 | R | 7 | 20231215 |
| EPI_ISL_19718876 | NSP3 | hCoV-19/Singapore/Y25R6MSC51/2025 | P | 278 | S | 2865 | 20250203 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | P | 278 | N | 4 | 20221118 |
| EPI_ISL_16346522 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00017226_01/2022 | P | 278 | H | 31 | 20221212 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | P | 278 | G | 3 | 20231007 |
| EPI_ISL_19820080 | NSP3 | hCoV-19/Canada/ON-PHL-202505032/2025 | P | 278 | L | 1101 | 20250323 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | P | 278 | Y | 21 | 20221229 |
| EPI_ISL_2375846 | NSP3 | hCoV-19/Brazil/RS-LMM54273/2021 | P | 278 | E | 1 | 20210419 |
| EPI_ISL_19490098 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004208132/2024 | P | 278 | Q | 151 | 20240904 |
| EPI_ISL_10944925 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95010/2022 | P | 278 | C | 5 | 20220301 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | P | 278 | V | 11 | 20230420 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | P | 278 | insstopIstopstopLHSYstopstopS | 1 | 20211104 |
| EPI_ISL_19693465 | NSP3 | hCoV-19/Brazil/PA-IEC-25-001394/2024 | P | 278 | T | 886 | 20241219 |
| EPI_ISL_19530175 | NSP3 | hCoV-19/USA/VA-VCUVAS3-TZLS852344/2024 | P | 278 | del | 283 | 20240926 |
| EPI_ISL_13574303 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2510/2022 | P | 278 | W | 2 | 20220604 |
| EPI_ISL_15120063 | NSP3 | hCoV-19/Australia/VIC71049/2022 | L | 279 | P | 14 | 20220912 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | L | 279 | C | 20 | 20230220 |
| EPI_ISL_19000508 | NSP3 | hCoV-19/Japan/PG-596223/2024 | L | 279 | F | 47 | 20240201 |
| EPI_ISL_10401022 | NSP3 | hCoV-19/Denmark/DCGC-391208/2022 | L | 279 | H | 2 | 20220218 |
| EPI_ISL_14718232 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19515/2022 | L | 279 | R | 8 | 20220805 |
| EPI_ISL_2380075 | NSP3 | hCoV-19/Egypt/NRC-6050/2020 | L | 279 | stop | 1 | 20200624 |
| EPI_ISL_19537317 | NSP3 | hCoV-19/Canada/ON-KHS-05366-v1/2024 | L | 279 | I | 273 | 20241104 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 279 | V | 14 | 20230412 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | L | 279 | A | 2 | 20230412 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | L | 279 | N | 3 | 20230507 |
| EPI_ISL_19520580 | NSP3 | hCoV-19/env/Ukraine/88911/2024 | L | 279 | del | 286 | 20240926 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | L | 279 | M | 48 | 20221213 |
| EPI_ISL_15707122 | NSP3 | hCoV-19/USA/CT-CDC-LC0923028/2022 | L | 279 | J | 6 | 20221026 |
| EPI_ISL_12582779 | NSP3 | hCoV-19/Turkey/HSGM-GS2017/2022 | L | 279 | Q | 3 | 20220401 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | L | 279 | T | 3 | 20211219 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | L | 279 | K | 4 | 20220829 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 279 | S | 1 | 20221229 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | L | 279 | W | 1 | 20210805 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | K | 280 | G | 4 | 20231007 |
| EPI_ISL_19603082 | NSP3 | hCoV-19/Spain/PV-HUD-39804676/2024 | K | 280 | R | 347 | 20241125 |
| EPI_ISL_19710297 | NSP3 | hCoV-19/Netherlands/OV-RIVM-145005/2025 | K | 280 | N | 4715 | 20250114 |
| EPI_ISL_19014145 | NSP3 | hCoV-19/Germany/HB-RKI-I-1143014/2024 | K | 280 | I | 12 | 20240217 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | K | 280 | insWVV | 1 | 20220630 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | K | 280 | Q | 61 | 20221213 |
| EPI_ISL_19326652 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000333601/2024 | K | 280 | T | 111 | 20240717 |
| EPI_ISL_19530175 | NSP3 | hCoV-19/USA/VA-VCUVAS3-TZLS852344/2024 | K | 280 | E | 355 | 20240926 |
| EPI_ISL_17530350 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13878/2023 | K | 280 | L | 5 | 20230402 |
| EPI_ISL_17530366 | NSP3 | hCoV-19/India/MH-ICMR-NIV-232242/2023 | K | 280 | stop | 11 | 20230401 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | K | 280 | D | 1 | 20230420 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | K | 280 | F | 1 | 20231121 |
| EPI_ISL_19181848 | NSP3 | hCoV-19/Singapore/R30MQ136/2024 | K | 280 | insL | 1 | 20240521 |
| EPI_ISL_19317124 | NSP3 | hCoV-19/USA/AZ-CDC-LC1111240/2024 | K | 280 | del | 141 | 20240723 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 280 | C | 3 | 20220210 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | K | 280 | M | 2 | 20210818 |
| EPI_ISL_17650014 | NSP3 | hCoV-19/Japan/KSH103/2022 | K | 280 | insXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20221031 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 280 | S | 3 | 20221229 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | K | 280 | V | 2 | 20210805 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | V | 281 | H | 21 | 20220509 |
| EPI_ISL_19317124 | NSP3 | hCoV-19/USA/AZ-CDC-LC1111240/2024 | V | 281 | del | 199 | 20240723 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | V | 281 | D | 1 | 20210818 |
| EPI_ISL_10944925 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95010/2022 | V | 281 | R | 6 | 20220301 |
| EPI_ISL_18915731 | NSP3 | hCoV-19/USA/CO-CDPHE-41673296/2023 | V | 281 | I | 11 | 20231229 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | V | 281 | stop | 1 | 20200729 |
| EPI_ISL_17530331 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13956/2023 | V | 281 | insR | 1 | 20230331 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 281 | E | 20 | 20230412 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | V | 281 | S | 2 | 20211219 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | V | 281 | T | 2 | 20210726 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 281 | P | 3 | 20220210 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | V | 281 | K | 4 | 20231121 |
| EPI_ISL_19230292 | NSP3 | hCoV-19/Sichuan/ZGCDC-zgxg319/2024 | V | 281 | L | 375 | 20240513 |
| EPI_ISL_3411098 | NSP3 | hCoV-19/USA/WA-CDC-UW21073167809/2021 | V | 281 | G | 2 | 20210731 |
| EPI_ISL_19829429 | NSP3 | hCoV-19/USA/CA-CDC-2-8366165/2025 | V | 281 | M | 625 | 20250114 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | V | 281 | W | 3 | 20220128 |
| EPI_ISL_19829164 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136534/2025 | V | 281 | A | 310 | 20250402 |
| EPI_ISL_18681403 | NSP3 | hCoV-19/Brazil/GO-HLAGYN-2392703/2023 | G | 282 | V | 214 | 20231108 |
| EPI_ISL_17530331 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13956/2023 | G | 282 | T | 9 | 20230331 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | G | 282 | insKTL | 1 | 20210823 |
| EPI_ISL_17530356 | NSP3 | hCoV-19/India/MH-ICMR-NIV-HRV-21/2023 | G | 282 | L | 3 | 20230406 |
| EPI_ISL_11887726 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0688/2021 | G | 282 | H | 2 | 20211229 |
| EPI_ISL_17713094 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000286281SP/2022 | G | 282 | W | 54 | 20220825 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | G | 282 | insVVVFstop | 1 | 20210802 |
| EPI_ISL_19051935 | NSP3 | hCoV-19/USA/CA-SEARCH-230109/2023 | G | 282 | A | 14 | 20231013 |
| EPI_ISL_6357248 | NSP3 | hCoV-19/Romania/33055/2021 | G | 282 | insWstopLCFKRT | 1 | 20210104 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | G | 282 | stop | 1 | 20210118 |
| EPI_ISL_19587119 | NSP3 | hCoV-19/Sweden/U-R882788/2024 | G | 282 | C | 433 | 20241102 |
| EPI_ISL_6122906 | NSP3 | hCoV-19/Switzerland/SZ-ETHZ-34533842/2021 | G | 282 | R | 1 | 20211025 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | G | 282 | N | 24 | 20231007 |
| EPI_ISL_19317124 | NSP3 | hCoV-19/USA/AZ-CDC-LC1111240/2024 | G | 282 | del | 179 | 20240723 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | G | 282 | M | 1 | 20210817 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | G | 282 | E | 13 | 20221213 |
| EPI_ISL_18549753 | NSP3 | hCoV-19/USA/OH-ODH-SC3033315/2023 | G | 282 | D | 20 | 20231106 |
| EPI_ISL_19782092 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10895/2025 | G | 282 | S | 2744 | 20250224 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | G | 282 | K | 6 | 20220829 |
| EPI_ISL_17530369 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14039/2023 | G | 283 | L | 3 | 20230405 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | G | 283 | P | 6 | 20220829 |
| EPI_ISL_19819575 | NSP3 | hCoV-19/Australia/SA2496583/2025 | G | 283 | S | 1162 | 20250320 |
| EPI_ISL_17713094 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000286281SP/2022 | G | 283 | stop | 2 | 20220825 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | G | 283 | del | 177 | 20240524 |
| EPI_ISL_19714131 | NSP3 | hCoV-19/Russia/BRY-RII-MH218342S/2024 | G | 283 | V | 319 | 20241112 |
| EPI_ISL_17530350 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13878/2023 | G | 283 | T | 3 | 20230402 |
| EPI_ISL_1109635 | NSP3 | hCoV-19/USA/TN-BEM-0001/2021 | G | 283 | insRQ | 1 | 20210217 |
| EPI_ISL_17530356 | NSP3 | hCoV-19/India/MH-ICMR-NIV-HRV-21/2023 | G | 283 | N | 3 | 20230406 |
| EPI_ISL_5649448 | NSP3 | hCoV-19/Brazil/SP-IB_116843/2021 | G | 283 | insXLCFKRTQ | 1 | 20210620 |
| EPI_ISL_4311735 | NSP3 | hCoV-19/England/PHEC-Z304Z8A7/2021 | G | 283 | insTQ | 1 | 20210905 |
| EPI_ISL_10057479 | NSP3 | hCoV-19/USA/ID-IBL-789587/2022 | G | 283 | W | 4 | 20220126 |
| EPI_ISL_19827115 | NSP3 | hCoV-19/Chile/RM-ISPC-26321/2025 | G | 283 | D | 6268 | 20250327 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | G | 283 | I | 1 | 20210817 |
| EPI_ISL_19776544 | NSP3 | hCoV-19/Denmark/DCGC-691914/2025 | G | 283 | C | 240 | 20250217 |
| EPI_ISL_17275342 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45867/2023 | G | 283 | A | 19 | 20230217 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | G | 283 | H | 1 | 20210424 |
| EPI_ISL_15402076 | NSP3 | hCoV-19/Japan/TKYhug7076/2022 | G | 283 | R | 6 | 20220826 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | G | 283 | F | 1 | 20220630 |
| EPI_ISL_6978240 | NSP3 | hCoV-19/England/PHEC-3T034T59/2021 | G | 283 | insRTQ | 1 | 20211110 |
| EPI_ISL_17530331 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13956/2023 | G | 283 | Q | 10 | 20230331 |
| EPI_ISL_17275342 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45867/2023 | G | 283 | insWNIGEQKSI | 1 | 20230217 |
| EPI_ISL_18828538 | NSP3 | hCoV-19/Italy/FVG-UD-65348876/2024 | S | 284 | I | 30 | 20240115 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | S | 284 | Q | 1 | 20210428 |
| EPI_ISL_19810677 | NSP3 | hCoV-19/Sweden/F-91686323NG/2025 | S | 284 | C | 133 | 20250304 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | S | 284 | Y | 3 | 20231007 |
| EPI_ISL_16284101 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223254455/2022 | S | 284 | insCVLSGHNLAKHCLHVVGPNVNKGEDIQLLRPLKVGGS | 1 | 20221121 |
| EPI_ISL_19826287 | NSP3 | hCoV-19/Canada/ON-HSC-202501557-v1/2025 | S | 284 | G | 5246 | 20250325 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | S | 284 | D | 9 | 20221213 |
| EPI_ISL_17530383 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14075/2023 | S | 284 | T | 13 | 20230409 |
| EPI_ISL_2967365 | NSP3 | hCoV-19/South Korea/KDCA5648/2021 | S | 284 | F | 1 | 20210618 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 284 | L | 4 | 20220210 |
| EPI_ISL_19803230 | NSP3 | hCoV-19/env/Germany/BY-LGL-6530866/2025 | S | 284 | N | 348 | 20250312 |
| EPI_ISL_10057479 | NSP3 | hCoV-19/USA/ID-IBL-789587/2022 | S | 284 | stop | 5 | 20220126 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | S | 284 | K | 3 | 20221118 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | S | 284 | P | 1 | 20230217 |
| EPI_ISL_18613968 | NSP3 | hCoV-19/Sweden/N-2A785350523/2023 | S | 284 | R | 1004 | 20231129 |
| EPI_ISL_18936253 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00157/2023 | S | 284 | V | 64 | 20230421 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | S | 284 | del | 180 | 20240524 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | C | 285 | M | 1 | 20200701 |
| EPI_ISL_19365320 | NSP3 | hCoV-19/Canada/BC-BCCDC-727502/2024 | C | 285 | R | 93 | 20240811 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | C | 285 | H | 1 | 20220210 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | C | 285 | stop | 1 | 20210817 |
| EPI_ISL_18322240 | NSP3 | hCoV-19/USA/TX-HMH-M-133555/2023 | C | 285 | W | 8 | 20230910 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | C | 285 | D | 5 | 20221213 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | C | 285 | T | 6 | 20231007 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 285 | E | 1 | 20210318 |
| EPI_ISL_18936253 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00157/2023 | C | 285 | V | 66 | 20230421 |
| EPI_ISL_19671051 | NSP3 | hCoV-19/Japan/FR021-0006/2025 | C | 285 | L | 10 | 20250106 |
| EPI_ISL_18104337 | NSP3 | hCoV-19/USA/PA-CDC-QDX83233116/2023 | C | 285 | S | 32 | 20230726 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | C | 285 | K | 1 | 20200729 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | C | 285 | del | 191 | 20240524 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | C | 285 | insFstopR | 1 | 20210812 |
| EPI_ISL_11907646 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-25/2022 | C | 285 | insD | 1 | 20220207 |
| EPI_ISL_18423584 | NSP3 | hCoV-19/USA/TX-HMH-134603/2023 | C | 285 | F | 16 | 20231004 |
| EPI_ISL_8812970 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-102921-1222/2021 | C | 285 | insstop | 5 | 20211029 |
| EPI_ISL_19334598 | NSP3 | hCoV-19/Egypt/CPHL-EGY24137/2024 | C | 285 | G | 8 | 20240624 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 285 | N | 2 | 20220210 |
| EPI_ISL_17530383 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14075/2023 | C | 285 | I | 1 | 20230409 |
| EPI_ISL_19454115 | NSP3 | hCoV-19/USA/NY-PRL-240923_86A07/2024 | C | 285 | Y | 222 | 20240827 |
| EPI_ISL_17530356 | NSP3 | hCoV-19/India/MH-ICMR-NIV-HRV-21/2023 | C | 285 | insF | 1 | 20230406 |
| EPI_ISL_19440101 | NSP3 | hCoV-19/Hubei/HCDC-HS7134/2024 | V | 286 | G | 43 | 20240918 |
| EPI_ISL_11403607 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-31/2022 | V | 286 | insT | 1 | 20220208 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 286 | H | 2 | 20220210 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | V | 286 | del | 156 | 20240524 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | V | 286 | T | 8 | 20220630 |
| EPI_ISL_11907646 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-25/2022 | V | 286 | Q | 1 | 20220207 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | V | 286 | insFM | 3 | 20230502 |
| EPI_ISL_18938479 | NSP3 | hCoV-19/USA/CA-LACPHL-AY05446/2024 | V | 286 | N | 3 | 20240201 |
| EPI_ISL_19806984 | NSP3 | hCoV-19/Spain/CL-UCHV-50006/2025 | V | 286 | A | 298 | 20250303 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | V | 286 | L | 40 | 20241226 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | V | 286 | K | 1 | 20230412 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | V | 286 | Y | 6 | 20221213 |
| EPI_ISL_11796870 | NSP3 | hCoV-19/Canada/SK-NML-387402/2022 | V | 286 | S | 2 | 20220310 |
| EPI_ISL_10057479 | NSP3 | hCoV-19/USA/ID-IBL-789587/2022 | V | 286 | C | 4 | 20220126 |
| EPI_ISL_17530356 | NSP3 | hCoV-19/India/MH-ICMR-NIV-HRV-21/2023 | V | 286 | M | 13 | 20230406 |
| EPI_ISL_10944925 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95010/2022 | V | 286 | stop | 3 | 20220301 |
| EPI_ISL_19671051 | NSP3 | hCoV-19/Japan/FR021-0006/2025 | V | 286 | I | 660 | 20250106 |
| EPI_ISL_19704226 | NSP3 | hCoV-19/Japan/FR053-0692/2024 | V | 286 | F | 235 | 20241223 |
| EPI_ISL_17490498 | NSP3 | hCoV-19/Hebei/HCDC-0156/2023 | V | 286 | D | 6 | 20230321 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | L | 287 | K | 1 | 20210424 |
| EPI_ISL_7626112 | NSP3 | hCoV-19/Scotland/QEUH-2DA1BD0/2021 | L | 287 | J | 2 | 20211206 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | L | 287 | del | 116 | 20230413 |
| EPI_ISL_18936253 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00157/2023 | L | 287 | F | 79 | 20230421 |
| EPI_ISL_16738511 | NSP3 | hCoV-19/Israel/CVL-9008695/2022 | L | 287 | I | 17 | 20221214 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | L | 287 | R | 4 | 20221118 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | L | 287 | Q | 3 | 20220630 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | L | 287 | insKRTQ | 1 | 20210806 |
| EPI_ISL_19198949 | NSP3 | hCoV-19/Canada/BC-BCCDC-715092/2024 | L | 287 | V | 51 | 20240524 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 287 | C | 1 | 20220210 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | L | 287 | insKPTQ | 1 | 20211231 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 287 | G | 1 | 20220210 |
| EPI_ISL_19351723 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16203/2024 | L | 287 | stop | 7 | 20240619 |
| EPI_ISL_18610455 | NSP3 | hCoV-19/Canada/ON-PHL-23-45211/2023 | L | 287 | T | 3 | 20231126 |
| EPI_ISL_18728881 | NSP3 | hCoV-19/USA/NY-CDC-QDX90322839/2023 | L | 287 | S | 141 | 20231216 |
| EPI_ISL_7638523 | NSP3 | hCoV-19/Greece/312157/2021 | L | 287 | A | 5 | 20211129 |
| EPI_ISL_16284105 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223292480/2022 | L | 287 | insSGHNLAKHCLHVVGPNVNKGEDIKVGGSCVL | 1 | 20221125 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | L | 287 | E | 2 | 20231007 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | L | 287 | N | 1 | 20210726 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 287 | M | 23 | 20241226 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 288 | insRTQSCstopTLSSCCRPKCstopQRstop | 1 | 20230108 |
| EPI_ISL_18809106 | NSP3 | hCoV-19/USA/NY-CDC-QDX90889759/2024 | S | 288 | C | 47 | 20240102 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | S | 288 | Y | 1 | 20230217 |
| EPI_ISL_18000073 | NSP3 | hCoV-19/Australia/SA543673/2023 | S | 288 | I | 138 | 20230619 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | S | 288 | E | 4 | 20231007 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | S | 288 | del | 105 | 20230413 |
| EPI_ISL_18936253 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00157/2023 | S | 288 | stop | 58 | 20230421 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 288 | K | 10 | 20230108 |
| EPI_ISL_19675789 | NSP3 | hCoV-19/Canada/ON-PHL-202501401/2025 | S | 288 | G | 358 | 20250109 |
| EPI_ISL_11294820 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-8/2022 | S | 288 | L | 4 | 20220209 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | S | 288 | V | 1 | 20200626 |
| EPI_ISL_16284111 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223284815/2022 | S | 288 | insGHNLAKHCLHVVGLKVGGSCVLS | 2 | 20221124 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | S | 288 | H | 2 | 20230412 |
| EPI_ISL_19738359 | NSP3 | hCoV-19/Chile/CO-1030/2025 | S | 288 | R | 250 | 20250105 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 288 | D | 1 | 20210318 |
| EPI_ISL_17530291 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14032/2023 | S | 288 | M | 4 | 20230406 |
| EPI_ISL_19814908 | NSP3 | hCoV-19/Canada/AB-ABPHL-131513/2025 | S | 288 | N | 2179 | 20250322 |
| EPI_ISL_19511931 | NSP3 | hCoV-19/USA/MN-MDH-43575/2024 | S | 288 | T | 50 | 20241009 |
| EPI_ISL_11468166 | NSP3 | hCoV-19/Brazil/RN-ITV-179127/2021 | S | 288 | insVV | 1 | 20210419 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | S | 288 | P | 1 | 20210823 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | S | 288 | F | 1 | 20210919 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | S | 288 | A | 10 | 20221213 |
| EPI_ISL_5649448 | NSP3 | hCoV-19/Brazil/SP-IB_116843/2021 | G | 289 | insCCRXKXstopQRstopX | 1 | 20210620 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | G | 289 | C | 5 | 20220630 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | G | 289 | L | 6 | 20230412 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | G | 289 | N | 1 | 20210428 |
| EPI_ISL_17759764 | NSP3 | hCoV-19/USA/UT-UPHL-90521/2023 | G | 289 | E | 7 | 20230409 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | G | 289 | del | 109 | 20230413 |
| EPI_ISL_17466166 | NSP3 | hCoV-19/India/CT-AIIMSR-VRDL-INSACOG-1165/2023 | G | 289 | stop | 351 | 20230404 |
| EPI_ISL_12736844 | NSP3 | hCoV-19/Germany/NW-RKI-I-797689/2022 | G | 289 | I | 2 | 20220506 |
| EPI_ISL_7159751 | NSP3 | hCoV-19/USA/NY-PA-PBRI-CT-1307/2021 | G | 289 | W | 1 | 20211129 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | G | 289 | T | 25 | 20230220 |
| EPI_ISL_17530291 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14032/2023 | G | 289 | D | 12 | 20230406 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | G | 289 | insCstopQRstopR | 1 | 20210823 |
| EPI_ISL_11403607 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-31/2022 | G | 289 | P | 2 | 20220208 |
| EPI_ISL_8812970 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-102921-1222/2021 | G | 289 | insCCRPKCstopQRstopR | 4 | 20211029 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | G | 289 | K | 3 | 20220210 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | G | 289 | insWS | 1 | 20200626 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | G | 289 | A | 84 | 20231007 |
| EPI_ISL_8812970 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-102921-1222/2021 | G | 289 | S | 6 | 20211029 |
| EPI_ISL_16974583 | NSP3 | hCoV-19/Japan/PG-445171/2023 | G | 289 | V | 10 | 20230125 |
| EPI_ISL_16524410 | NSP3 | hCoV-19/Italy/LOM-ASST-69263166/2023 | G | 289 | R | 22 | 20230109 |
| EPI_ISL_19807220 | NSP3 | hCoV-19/Canada/ON-KHS-202500774-v1/2025 | H | 290 | F | 9 | 20250308 |
| EPI_ISL_18907236 | NSP3 | hCoV-19/USA/NV-NSPHL-23-S005005/2023 | H | 290 | N | 47 | 20230906 |
| EPI_ISL_18823629 | NSP3 | hCoV-19/South Korea/KDCA282845/2024 | H | 290 | Q | 103 | 20240102 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | H | 290 | del | 104 | 20230413 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | H | 290 | insYPstop | 1 | 20220112 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | H | 290 | A | 7 | 20220829 |
| EPI_ISL_13722328 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-114/2022 | H | 290 | V | 5 | 20220615 |
| EPI_ISL_9144999 | NSP3 | hCoV-19/USA/WA-PHL-010634/2022 | H | 290 | L | 9 | 20220103 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | H | 290 | K | 3 | 20231007 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | H | 290 | insI | 1 | 20211229 |
| EPI_ISL_17530319 | NSP3 | hCoV-19/India/MH-ICMR-NIV-232291/2023 | H | 290 | insL | 2 | 20230405 |
| EPI_ISL_18572477 | NSP3 | hCoV-19/USA/CA-CDPH-6000017418/2023 | H | 290 | D | 66 | 20231031 |
| EPI_ISL_17725181 | NSP3 | hCoV-19/Shanghai/SCDC-HG0522-1019/2023 | H | 290 | R | 23 | 20230520 |
| EPI_ISL_19829113 | NSP3 | hCoV-19/USA/IN-CDC-LC1136486/2025 | H | 290 | Y | 9590 | 20250401 |
| EPI_ISL_11468149 | NSP3 | hCoV-19/Brazil/RN-ITV-179486/2021 | H | 290 | W | 1 | 20210523 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | H | 290 | E | 3 | 20221130 |
| EPI_ISL_11333353 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-39/2022 | H | 290 | T | 12 | 20220224 |
| EPI_ISL_11294820 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-8/2022 | H | 290 | P | 3 | 20220209 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | H | 290 | stop | 25 | 20230220 |
| EPI_ISL_17530291 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14032/2023 | H | 290 | insF | 1 | 20230406 |
| EPI_ISL_17744298 | NSP3 | hCoV-19/USA/MO-20MU9599NPS/2021 | H | 290 | S | 1 | 20210813 |
| EPI_ISL_17072738 | NSP3 | hCoV-19/Spain/MC-HCUVA-70013206/2023 | N | 291 | H | 206 | 20230205 |
| EPI_ISL_4530169 | NSP3 | hCoV-19/England/PHEC-3G072G00/2021 | N | 291 | F | 2 | 20210919 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | N | 291 | R | 1 | 20200626 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 291 | C | 1 | 20220210 |
| EPI_ISL_10835156 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82011/2022 | N | 291 | Q | 6 | 20220117 |
| EPI_ISL_11333353 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-39/2022 | N | 291 | I | 21 | 20220224 |
| EPI_ISL_19662852 | NSP3 | hCoV-19/Singapore/R64MQ127/2024 | N | 291 | D | 566 | 20241122 |
| EPI_ISL_13722328 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-114/2022 | N | 291 | P | 2 | 20220615 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | N | 291 | insstopTK | 1 | 20210428 |
| EPI_ISL_19825303 | NSP3 | hCoV-19/USA/NY-NYULH-22586/2025 | N | 291 | S | 365 | 20250403 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | N | 291 | stop | 2 | 20211227 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | N | 291 | insKWVV | 1 | 20210817 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | N | 291 | G | 4 | 20221213 |
| EPI_ISL_19785166 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13978/2024 | N | 291 | K | 134 | 20241218 |
| EPI_ISL_1802914 | NSP3 | hCoV-19/USA/MN-CDC-IBX088064235878/2021 | N | 291 | insH | 1 | 20210406 |
| EPI_ISL_17430027 | NSP3 | hCoV-19/USA/MD-CDC-QDX48365457/2023 | N | 291 | Y | 95 | 20230326 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | N | 291 | M | 16 | 20230502 |
| EPI_ISL_19610577 | NSP3 | hCoV-19/Italy/LOM_Niguarda_45180937FEZ/2024 | N | 291 | T | 143 | 20241203 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | N | 291 | del | 100 | 20230413 |
| EPI_ISL_17815740 | NSP3 | hCoV-19/Singapore/R40MR125/2023 | N | 291 | B | 11 | 20230610 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | N | 291 | L | 24 | 20230220 |
| EPI_ISL_877757 | NSP3 | hCoV-19/USA/NC-UNC-LCCC0177/2020 | N | 291 | insRNY | 1 | 20200826 |
| EPI_ISL_4530169 | NSP3 | hCoV-19/England/PHEC-3G072G00/2021 | L | 292 | M | 1 | 20210919 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | L | 292 | Y | 1 | 20210118 |
| EPI_ISL_17744298 | NSP3 | hCoV-19/USA/MO-20MU9599NPS/2021 | L | 292 | C | 1 | 20210813 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | L | 292 | insstopT | 1 | 20211005 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 292 | T | 8 | 20230108 |
| EPI_ISL_19683602 | NSP3 | hCoV-19/USA/MT-MTPHL-4164014/2024 | L | 292 | I | 248 | 20241206 |
| EPI_ISL_10880362 | NSP3 | hCoV-19/Belgium/UW21111941418/2021 | L | 292 | stop | 1 | 20211119 |
| EPI_ISL_19803510 | NSP3 | hCoV-19/USA/WI-WSLH-2501017/2025 | L | 292 | F | 2438 | 20250310 |
| EPI_ISL_6933365 | NSP3 | hCoV-19/Turkey/HSGM-F2525/2021 | L | 292 | insXX | 1 | 20211118 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 292 | N | 1 | 20220210 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | L | 292 | Q | 1 | 20211227 |
| EPI_ISL_16103445 | NSP3 | hCoV-19/USA/AZ-ASPHL-1830/2022 | L | 292 | H | 4 | 20221030 |
| EPI_ISL_19028172 | NSP3 | hCoV-19/Puerto Rico/S-6619/2024 | L | 292 | P | 11 | 20240131 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | L | 292 | del | 93 | 20230413 |
| EPI_ISL_19825783 | NSP3 | hCoV-19/Oman/CPHL_725632/2025 | L | 292 | V | 21 | 20250128 |
| EPI_ISL_17976265 | NSP3 | hCoV-19/Peru/LIM-INS-45417/2023 | L | 292 | J | 8 | 20230607 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 292 | S | 6 | 20220210 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | L | 292 | insY | 3 | 20220829 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | L | 292 | R | 11 | 20221118 |
| EPI_ISL_13722328 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-114/2022 | L | 292 | G | 2 | 20220615 |
| EPI_ISL_7638523 | NSP3 | hCoV-19/Greece/312157/2021 | L | 292 | K | 4 | 20211129 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | A | 293 | H | 1 | 20220210 |
| EPI_ISL_19334266 | NSP3 | hCoV-19/Canary Islands/CHUIMI-021437218685/2024 | A | 293 | S | 186 | 20240720 |
| EPI_ISL_11385210 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-50/2022 | A | 293 | insL | 1 | 20220225 |
| EPI_ISL_19750982 | NSP3 | hCoV-19/Germany/BW-RKI-I-1147762/2025 | A | 293 | T | 321 | 20250204 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | A | 293 | Y | 1 | 20210809 |
| EPI_ISL_11468166 | NSP3 | hCoV-19/Brazil/RN-ITV-179127/2021 | A | 293 | K | 1 | 20210419 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | A | 293 | L | 79 | 20231007 |
| EPI_ISL_18907642 | NSP3 | hCoV-19/USA/NY-URMC-O1S1L362-1/2024 | A | 293 | V | 89 | 20240104 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | A | 293 | M | 19 | 20230220 |
| EPI_ISL_10276129 | NSP3 | hCoV-19/Switzerland/SO-ETHZ-36226008/2022 | A | 293 | D | 5 | 20220206 |
| EPI_ISL_8051889 | NSP3 | hCoV-19/England/BRBR-2D3A617/2021 | A | 293 | P | 7 | 20211204 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | A | 293 | N | 2 | 20221130 |
| EPI_ISL_10880362 | NSP3 | hCoV-19/Belgium/UW21111941418/2021 | A | 293 | E | 3 | 20211119 |
| EPI_ISL_13722328 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-114/2022 | A | 293 | F | 1 | 20220615 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | A | 293 | insA | 1 | 20210803 |
| EPI_ISL_19594601 | NSP3 | hCoV-19/Yunnan/YNCDC-2014/2024 | A | 293 | G | 13 | 20240720 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | A | 293 | Q | 3 | 20240319 |
| EPI_ISL_10835156 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82011/2022 | A | 293 | C | 8 | 20220117 |
| EPI_ISL_2227486 | NSP3 | hCoV-19/USA/AZ-ASPHL-3954/2021 | A | 293 | stop | 1 | 20210317 |
| EPI_ISL_17788055 | NSP3 | hCoV-19/env/Germany/BY-LGL-5856604/2023 | A | 293 | del | 91 | 20230403 |
| EPI_ISL_19678365 | NSP3 | hCoV-19/USA/NJ-CDC-LC1128550/2025 | K | 294 | R | 368 | 20250107 |
| EPI_ISL_12083637 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-61/2022 | K | 294 | V | 3 | 20220101 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | K | 294 | L | 62 | 20230412 |
| EPI_ISL_18526875 | NSP3 | hCoV-19/Canada/BC-BCCDC-668671/2023 | K | 294 | N | 43 | 20231031 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 294 | G | 2 | 20220210 |
| EPI_ISL_19004586 | NSP3 | hCoV-19/USA/TX-PHH-CS-03639/2024 | K | 294 | T | 19 | 20240220 |
| EPI_ISL_5324097 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00362273_CAM_IZSM_COLLI_TIGEM/2021 | K | 294 | C | 1 | 20210918 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | K | 294 | insSLKstopGYstop | 1 | 20210909 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | K | 294 | S | 9 | 20220630 |
| EPI_ISL_11293025 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-5/2022 | K | 294 | A | 3 | 20220211 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | K | 294 | del | 78 | 20230217 |
| EPI_ISL_19704559 | NSP3 | hCoV-19/Brazil/CE-LACENCE-232501866/2024 | K | 294 | E | 48 | 20241230 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 294 | stop | 13 | 20230108 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | K | 294 | D | 19 | 20230220 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | K | 294 | Y | 1 | 20221118 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | K | 294 | Q | 6 | 20221130 |
| EPI_ISL_18887167 | NSP3 | hCoV-19/USA/OH-ODH-SC4030560/2024 | K | 294 | I | 14 | 20240129 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | H | 295 | E | 9 | 20230108 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 295 | V | 3 | 20220210 |
| EPI_ISL_19824770 | NSP3 | hCoV-19/France/ARA-RELAB-HCL725000040701/2025 | H | 295 | Q | 327 | 20250318 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | H | 295 | del | 95 | 20230502 |
| EPI_ISL_17788055 | NSP3 | hCoV-19/env/Germany/BY-LGL-5856604/2023 | H | 295 | S | 8 | 20230403 |
| EPI_ISL_11905518 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-MI.22.31470/2022 | H | 295 | L | 4 | 20220330 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | H | 295 | C | 8 | 20220630 |
| EPI_ISL_19776440 | NSP3 | hCoV-19/South Africa/PATH-CERI-K065617/2025 | H | 295 | N | 204 | 20250116 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | H | 295 | W | 1 | 20211006 |
| EPI_ISL_19826387 | NSP3 | hCoV-19/Canada/ON-PHL-202505086/2025 | H | 295 | Y | 24705 | 20250329 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | H | 295 | K | 3 | 20231007 |
| EPI_ISL_16751607 | NSP3 | hCoV-19/USA/NY-Wadsworth-001971/2023 | H | 295 | D | 12 | 20230106 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | H | 295 | A | 1 | 20210318 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | H | 295 | insSS | 1 | 20220128 |
| EPI_ISL_19715681 | NSP3 | hCoV-19/USA/NY-NYULH-22010/2025 | H | 295 | R | 493 | 20250122 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | H | 295 | T | 23 | 20230101 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | C | 296 | M | 1 | 20210726 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | C | 296 | insKS | 2 | 20231007 |
| EPI_ISL_16524410 | NSP3 | hCoV-19/Italy/LOM-ASST-69263166/2023 | C | 296 | stop | 3 | 20230109 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | C | 296 | G | 7 | 20220829 |
| EPI_ISL_16407942 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1110/2022 | C | 296 | N | 1 | 20221118 |
| EPI_ISL_18288989 | NSP3 | hCoV-19/USA/CA-SEARCH-225691/2023 | C | 296 | R | 14 | 20230204 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | C | 296 | insHASstopIstopstop | 1 | 20210909 |
| EPI_ISL_1909249 | NSP3 | hCoV-19/Morocco/FMP-284/2021 | C | 296 | A | 1 | 20210416 |
| EPI_ISL_6761898 | NSP3 | hCoV-19/England/ALDP-2B2D5C1/2021 | C | 296 | W | 3 | 20211120 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | C | 296 | del | 83 | 20230502 |
| EPI_ISL_11333353 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-39/2022 | C | 296 | V | 16 | 20220224 |
| EPI_ISL_13823533 | NSP3 | hCoV-19/Denmark/DCGC-547497/2022 | C | 296 | I | 4 | 20220709 |
| EPI_ISL_19829060 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136742/2025 | C | 296 | F | 5127 | 20250331 |
| EPI_ISL_14443129 | NSP3 | hCoV-19/India/OR-ILSGS18548/2022 | C | 296 | T | 65 | 20220720 |
| EPI_ISL_18091228 | NSP3 | hCoV-19/USA/CO-CDPHE-40700377/2023 | C | 296 | Y | 41 | 20230406 |
| EPI_ISL_9053093 | NSP3 | hCoV-19/Thailand/NIC_BKK_SEQ24311/2021 | C | 296 | Q | 2 | 20211225 |
| EPI_ISL_19216621 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000181401/2024 | C | 296 | S | 195 | 20240527 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | C | 296 | E | 1 | 20221130 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | C | 296 | L | 28 | 20230220 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | C | 296 | K | 2 | 20230412 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | L | 297 | K | 20 | 20230220 |
| EPI_ISL_16407942 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1110/2022 | L | 297 | stop | 1 | 20221118 |
| EPI_ISL_17780993 | NSP3 | hCoV-19/Spain/CL-HCUV-42154/2023 | L | 297 | P | 12 | 20230519 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | L | 297 | del | 82 | 20230502 |
| EPI_ISL_18379040 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000208989SP/2022 | L | 297 | insXXX | 1 | 20221118 |
| EPI_ISL_18546926 | NSP3 | hCoV-19/USA/TX-HMH-M-135093/2023 | L | 297 | V | 68 | 20231022 |
| EPI_ISL_19742229 | NSP3 | hCoV-19/France/GES-RELAB-IPP01917/2025 | L | 297 | I | 430 | 20250129 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | L | 297 | A | 3 | 20231007 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 297 | S | 6 | 20230101 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | L | 297 | G | 4 | 20230412 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | L | 297 | T | 2 | 20230217 |
| EPI_ISL_14443129 | NSP3 | hCoV-19/India/OR-ILSGS18548/2022 | L | 297 | C | 2 | 20220720 |
| EPI_ISL_19192728 | NSP3 | hCoV-19/Canada/AB-ABPHL-118292/2024 | L | 297 | H | 60 | 20240528 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 297 | D | 1 | 20210318 |
| EPI_ISL_18641782 | NSP3 | hCoV-19/Netherlands/ZH-EMC-8489/2023 | L | 297 | R | 51 | 20231208 |
| EPI_ISL_18668877 | NSP3 | hCoV-19/Lithuania/MB231031_0082/2023 | L | 297 | J | 25 | 20231023 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | L | 297 | W | 1 | 20220128 |
| EPI_ISL_19773018 | NSP3 | hCoV-19/USA/WA-CDC-LC1134456/2025 | L | 297 | F | 1170 | 20250217 |
| EPI_ISL_2911713 | NSP3 | hCoV-19/England/MILK-1893A18/2021 | H | 298 | D | 1 | 20210705 |
| EPI_ISL_11468149 | NSP3 | hCoV-19/Brazil/RN-ITV-179486/2021 | H | 298 | K | 2 | 20210523 |
| EPI_ISL_18560684 | NSP3 | hCoV-19/Sweden/C-03_SE600_300000127809N2/2023 | H | 298 | L | 5 | 20231118 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | H | 298 | F | 65 | 20231007 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | H | 298 | A | 1 | 20220112 |
| EPI_ISL_13715829 | NSP3 | hCoV-19/England/PHEC-YYFU5RT/2022 | H | 298 | M | 21 | 20220617 |
| EPI_ISL_17988415 | NSP3 | hCoV-19/Spain/GA-SCQ-174289/2023 | H | 298 | N | 20 | 20230501 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | H | 298 | P | 5 | 20220630 |
| EPI_ISL_13422081 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2428/2022 | H | 298 | C | 2 | 20220607 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | H | 298 | del | 87 | 20230502 |
| EPI_ISL_19483794 | NSP3 | hCoV-19/Netherlands/NB-RIVM-142760/2024 | H | 298 | Q | 101 | 20240912 |
| EPI_ISL_16027792 | NSP3 | hCoV-19/England/LSPA-326034A8/2022 | H | 298 | R | 8 | 20221129 |
| EPI_ISL_19168138 | NSP3 | hCoV-19/Japan/FR067-0052/2024 | H | 298 | Y | 377 | 20240319 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | H | 298 | W | 19 | 20230220 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | H | 298 | S | 6 | 20230101 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | H | 298 | stop | 6 | 20230108 |
| EPI_ISL_14443129 | NSP3 | hCoV-19/India/OR-ILSGS18548/2022 | H | 298 | T | 2 | 20220720 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | H | 298 | G | 4 | 20220829 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | V | 299 | Q | 1 | 20220112 |
| EPI_ISL_19772175 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10758/2025 | V | 299 | I | 1749 | 20250216 |
| EPI_ISL_5324097 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00362273_CAM_IZSM_COLLI_TIGEM/2021 | V | 299 | W | 1 | 20210918 |
| EPI_ISL_1909249 | NSP3 | hCoV-19/Morocco/FMP-284/2021 | V | 299 | T | 1 | 20210416 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | V | 299 | Y | 3 | 20231007 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 299 | C | 6 | 20230101 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | V | 299 | M | 63 | 20220602 |
| EPI_ISL_10120562 | NSP3 | hCoV-19/England/NEWC-36F030B/2022 | V | 299 | F | 10 | 20220214 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | V | 299 | P | 1 | 20211005 |
| EPI_ISL_19349809 | NSP3 | hCoV-19/USA/FL-CDC-LC1114649/2024 | V | 299 | A | 118 | 20240805 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | V | 299 | del | 82 | 20230502 |
| EPI_ISL_18560684 | NSP3 | hCoV-19/Sweden/C-03_SE600_300000127809N2/2023 | V | 299 | L | 32 | 20231118 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 299 | S | 2 | 20220210 |
| EPI_ISL_12610874 | NSP3 | hCoV-19/Turkey/HSGM-GS2990/2022 | V | 299 | G | 6 | 20220407 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 299 | K | 7 | 20230108 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | V | 300 | G | 19 | 20221213 |
| EPI_ISL_19826514 | NSP3 | hCoV-19/USA/NY-PRL-250408_82G09/2025 | V | 300 | A | 799 | 20250324 |
| EPI_ISL_18560684 | NSP3 | hCoV-19/Sweden/C-03_SE600_300000127809N2/2023 | V | 300 | del | 95 | 20231118 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | V | 300 | Y | 1 | 20210909 |
| EPI_ISL_2158579 | NSP3 | hCoV-19/India/DL-MCW-KP-86/2020 | V | 300 | H | 1 | 20201202 |
| EPI_ISL_19134079 | NSP3 | hCoV-19/env/Germany/BY-LGL-6219347/2024 | V | 300 | F | 14 | 20240417 |
| EPI_ISL_11333353 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-39/2022 | V | 300 | S | 10 | 20220224 |
| EPI_ISL_14247678 | NSP3 | hCoV-19/Israel/ICH-741180037/2022 | V | 300 | T | 2 | 20220724 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 300 | C | 11 | 20230101 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | V | 300 | M | 2 | 20220112 |
| EPI_ISL_15134598 | NSP3 | hCoV-19/Germany/NW-RKI-I-979333/2022 | V | 300 | D | 2 | 20220909 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 300 | N | 1 | 20220210 |
| EPI_ISL_14749442 | NSP3 | hCoV-19/India/OR-ILSGS17659/2022 | V | 300 | K | 8 | 20220706 |
| EPI_ISL_19634777 | NSP3 | hCoV-19/USA/LA-EVTL23165/2024 | V | 300 | I | 964 | 20241218 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | V | 300 | L | 72 | 20221130 |
| EPI_ISL_13064068 | NSP3 | hCoV-19/USA/CA-CDC-QDX36964900/2022 | G | 301 | F | 1 | 20220512 |
| EPI_ISL_19825358 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-04D-MM00063R/2025 | G | 301 | S | 4170 | 20250404 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 301 | I | 1 | 20210318 |
| EPI_ISL_19820306 | NSP3 | hCoV-19/USA/NY-PRL-250401_82D06/2025 | G | 301 | C | 1368 | 20250316 |
| EPI_ISL_19707708 | NSP3 | hCoV-19/Japan/TKYnat18299/2025 | G | 301 | D | 334 | 20250112 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | G | 301 | K | 1 | 20210424 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 301 | stop | 8 | 20230108 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 301 | R | 12 | 20230101 |
| EPI_ISL_18560684 | NSP3 | hCoV-19/Sweden/C-03_SE600_300000127809N2/2023 | G | 301 | del | 124 | 20231118 |
| EPI_ISL_14749442 | NSP3 | hCoV-19/India/OR-ILSGS17659/2022 | G | 301 | T | 8 | 20220706 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | G | 301 | L | 5 | 20231007 |
| EPI_ISL_19319705 | NSP3 | hCoV-19/Greece/PHLnetwork_3020/2024 | G | 301 | V | 74 | 20240614 |
| EPI_ISL_18743439 | NSP3 | hCoV-19/USA/TX-HMH-M-136540/2023 | G | 301 | A | 39 | 20231219 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | G | 301 | Y | 1 | 20211006 |
| EPI_ISL_14749442 | NSP3 | hCoV-19/India/OR-ILSGS17659/2022 | P | 302 | F | 8 | 20220706 |
| EPI_ISL_19806971 | NSP3 | hCoV-19/Spain/CL-UCHV-49805/2024 | P | 302 | S | 413 | 20241204 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | P | 302 | G | 10 | 20220509 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | P | 302 | stop | 2 | 20211005 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | P | 302 | W | 1 | 20210909 |
| EPI_ISL_19765441 | NSP3 | hCoV-19/Henan/WIV-AY082/2020 | P | 302 | H | 1 | 20200129 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | P | 302 | V | 3 | 20220210 |
| EPI_ISL_17595474 | NSP3 | hCoV-19/USA/NJ-GBW-H20-317-5265/2023 | P | 302 | Q | 52 | 20230421 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | P | 302 | A | 67 | 20220829 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | P | 302 | insKCstopQRstopR | 1 | 20230101 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | P | 302 | del | 121 | 20241226 |
| EPI_ISL_8188585 | NSP3 | hCoV-19/Nigeria/MRL-OS-2345/2021 | P | 302 | R | 4 | 20210419 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | P | 302 | Y | 1 | 20230412 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 302 | K | 3 | 20211006 |
| EPI_ISL_6599855 | NSP3 | hCoV-19/Thailand/007/2021 | P | 302 | D | 2 | 20211025 |
| EPI_ISL_19070240 | NSP3 | hCoV-19/USA/NJ-CDC-LC1103115/2024 | P | 302 | L | 167 | 20240411 |
| EPI_ISL_19770385 | NSP3 | hCoV-19/Spain/AS-HUCA-232518204/2025 | P | 302 | T | 24 | 20250303 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | N | 303 | Q | 46 | 20211005 |
| EPI_ISL_19214223 | NSP3 | hCoV-19/USA/NE-NM_L378059849/2024 | N | 303 | K | 786 | 20240606 |
| EPI_ISL_19610249 | NSP3 | hCoV-19/Canada/AB-ABPHL-128313/2024 | N | 303 | Y | 29 | 20241126 |
| EPI_ISL_19730757 | NSP3 | hCoV-19/Spain/EX-CHUC-60545975/2025 | N | 303 | D | 517 | 20250120 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | N | 303 | L | 1 | 20221130 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | N | 303 | E | 1 | 20211006 |
| EPI_ISL_19288826 | NSP3 | hCoV-19/USA/CA-GBW-H20-338-5811/2023 | N | 303 | I | 12 | 20231127 |
| EPI_ISL_19037397 | NSP3 | hCoV-19/USA/PA-CDC-LC1102495/2024 | N | 303 | B | 12 | 20240323 |
| EPI_ISL_19594736 | NSP3 | hCoV-19/Yunnan/YNCDC-2420/2024 | N | 303 | T | 137 | 20240829 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | N | 303 | del | 139 | 20241226 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | N | 303 | C | 5 | 20221213 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | N | 303 | R | 4 | 20220630 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | N | 303 | stop | 1 | 20200729 |
| EPI_ISL_19280849 | NSP3 | hCoV-19/Spain/MD-HULP-200158207/2024 | N | 303 | H | 167 | 20240703 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | N | 303 | V | 1 | 20230412 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 303 | A | 12 | 20230108 |
| EPI_ISL_19828635 | NSP3 | hCoV-19/Japan/FR055-0190/2025 | N | 303 | S | 667 | 20250316 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | N | 303 | P | 1 | 20210424 |
| EPI_ISL_17595474 | NSP3 | hCoV-19/USA/NJ-GBW-H20-317-5265/2023 | N | 303 | M | 27 | 20230421 |
| EPI_ISL_17009063 | NSP3 | hCoV-19/USA/NV-CDC-QDX46501417/2023 | V | 304 | G | 20 | 20230206 |
| EPI_ISL_19498376 | NSP3 | hCoV-19/Hong Kong/VB24310342/2024 | V | 304 | A | 786 | 20241002 |
| EPI_ISL_19765477 | NSP3 | hCoV-19/Bahrain/PHD-24480007908/2024 | V | 304 | F | 156 | 20240923 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 304 | Y | 1 | 20220210 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | V | 304 | stop | 4 | 20220630 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | V | 304 | del | 166 | 20241226 |
| EPI_ISL_19824788 | NSP3 | hCoV-19/France/ARA-HCL025053906701/2025 | V | 304 | I | 726 | 20250331 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 304 | N | 2 | 20230412 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 304 | S | 1 | 20230101 |
| EPI_ISL_2375847 | NSP3 | hCoV-19/Brazil/RS-LMM54314/2021 | V | 304 | E | 1 | 20210423 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | V | 304 | C | 9 | 20220630 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 304 | R | 3 | 20230108 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | V | 304 | P | 1 | 20210918 |
| EPI_ISL_10078655 | NSP3 | hCoV-19/USA/MD-IGS-2106194600/2022 | V | 304 | D | 3 | 20220127 |
| EPI_ISL_18546589 | NSP3 | hCoV-19/USA/TX-HMH-M-135173/2023 | V | 304 | L | 47 | 20231027 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | V | 304 | T | 2 | 20211006 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | V | 304 | M | 45 | 20210419 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | V | 304 | insLstopRstopRHS | 1 | 20210809 |
| EPI_ISL_16281964 | NSP3 | hCoV-19/Wales/PHWC-PKEIGM/2022 | N | 305 | B | 5 | 20221206 |
| EPI_ISL_19823432 | NSP3 | hCoV-19/Japan/FR021-0254/2025 | N | 305 | S | 551 | 20250306 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | N | 305 | P | 1 | 20220210 |
| EPI_ISL_19780366 | NSP3 | hCoV-19/USA/NY-PRL-250311_81F07/2025 | N | 305 | K | 1278 | 20250228 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | N | 305 | V | 19 | 20230220 |
| EPI_ISL_19415465 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJ6C4/2024 | N | 305 | D | 278 | 20240828 |
| EPI_ISL_18938859 | NSP3 | hCoV-19/Nigeria/NCDC-NRL-GL-000213/2024 | N | 305 | Y | 30 | 20240207 |
| EPI_ISL_18546589 | NSP3 | hCoV-19/USA/TX-HMH-M-135173/2023 | N | 305 | T | 105 | 20231027 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | N | 305 | L | 48 | 20221213 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | N | 305 | I | 12 | 20231007 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | N | 305 | R | 5 | 20220630 |
| EPI_ISL_14826986 | NSP3 | hCoV-19/USA/CA-CDC-QDX40577950/2022 | N | 305 | insGSY | 4 | 20220820 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | N | 305 | del | 148 | 20241226 |
| EPI_ISL_19513328 | NSP3 | hCoV-19/Sweden/G-24-579184/2024 | N | 305 | H | 2 | 20241001 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | N | 305 | M | 3 | 20230217 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | N | 305 | stop | 9 | 20220630 |
| EPI_ISL_15320016 | NSP3 | hCoV-19/Canada/ON-PHL-22-42656/2022 | N | 305 | C | 1 | 20220930 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | N | 305 | Q | 2 | 20210722 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | K | 306 | A | 1 | 20221130 |
| EPI_ISL_3299183 | NSP3 | hCoV-19/Sweden/UUH-000199065161/2021 | K | 306 | insXX | 1 | 20210415 |
| EPI_ISL_19516274 | NSP3 | hCoV-19/Spain/AB-HGUA-60887807/2024 | K | 306 | insWKGE | 3 | 20240920 |
| EPI_ISL_19808677 | NSP3 | hCoV-19/Colombia/NAR-INS-VG-31877/2025 | K | 306 | R | 573 | 20250228 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | K | 306 | S | 10 | 20231007 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | K | 306 | del | 103 | 20241226 |
| EPI_ISL_15143381 | NSP3 | hCoV-19/Brazil/RJ-FIOCRUZ-00693/2022 | K | 306 | insERSED | 1 | 20220114 |
| EPI_ISL_15846104 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-118032/2022 | K | 306 | T | 114 | 20221109 |
| EPI_ISL_19295037 | NSP3 | hCoV-19/USA/UT-UPHL-240726920470/2024 | K | 306 | I | 13 | 20240718 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | K | 306 | L | 2 | 20210722 |
| EPI_ISL_17560021 | NSP3 | hCoV-19/USA/CA-SEARCH-133013/2023 | K | 306 | insEPG | 1 | 20230112 |
| EPI_ISL_18630913 | NSP3 | hCoV-19/Netherlands/NB-EMC-5374/2023 | K | 306 | N | 101 | 20231106 |
| EPI_ISL_19739672 | NSP3 | hCoV-19/Brazil/BA-LACENBA-294196796/2025 | K | 306 | E | 464 | 20250101 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 306 | D | 1 | 20220210 |
| EPI_ISL_13908763 | NSP3 | hCoV-19/Germany/SH-RKI-I-880095/2022 | K | 306 | insHIAI | 2 | 20220607 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | K | 306 | F | 19 | 20230220 |
| EPI_ISL_18611298 | NSP3 | hCoV-19/Peru/LIM-INS-47242/2023 | K | 306 | insAGE | 1 | 20231107 |
| EPI_ISL_16829089 | NSP3 | hCoV-19/Italy/LOM-ASST-02024642/2023 | K | 306 | V | 2 | 20230202 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 306 | G | 1 | 20220210 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | K | 306 | H | 4 | 20220630 |
| EPI_ISL_17536183 | NSP3 | hCoV-19/Peru/LIM-INS-42388/2023 | K | 306 | Q | 47 | 20230220 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 307 | Q | 1 | 20210318 |
| EPI_ISL_11243580 | NSP3 | hCoV-19/France/NAQ-HCL722001092301/2022 | G | 307 | insDRIS | 1 | 20220228 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 307 | T | 2 | 20230108 |
| EPI_ISL_19829102 | NSP3 | hCoV-19/USA/WI-CDC-LC1136479/2025 | G | 307 | C | 14490 | 20250401 |
| EPI_ISL_19783283 | NSP3 | hCoV-19/Japan/FR035-0101/2025 | G | 307 | D | 773 | 20250228 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | G | 307 | K | 44 | 20210419 |
| EPI_ISL_18983117 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00013513/2024 | G | 307 | R | 114 | 20240106 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | G | 307 | H | 3 | 20211005 |
| EPI_ISL_19805681 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U745-1/2025 | G | 307 | S | 1772 | 20250309 |
| EPI_ISL_19498056 | NSP3 | hCoV-19/USA/MS-MSPHL-0354/2024 | G | 307 | V | 90 | 20240823 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | G | 307 | stop | 21 | 20230220 |
| EPI_ISL_16815009 | NSP3 | hCoV-19/United Arab Emirates/BTC-5570/2021 | G | 307 | insVNS | 1 | 20210530 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | G | 307 | del | 152 | 20250116 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | G | 307 | N | 4 | 20231007 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | G | 307 | insWstopLCFKRT | 1 | 20210909 |
| EPI_ISL_12718275 | NSP3 | hCoV-19/USA/NY-CDC-2-5776661/2022 | G | 307 | insPDI | 4 | 20220303 |
| EPI_ISL_17709287 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000163439SP/2022 | G | 307 | insXX | 1 | 20220623 |
| EPI_ISL_19714307 | NSP3 | hCoV-19/Russia/TYU-RII-MH217358S/2024 | G | 307 | A | 17 | 20241126 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | G | 307 | I | 2 | 20220112 |
| EPI_ISL_13346743 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2332/2022 | G | 307 | W | 1 | 20220531 |
| EPI_ISL_17203657 | NSP3 | hCoV-19/USA/CA-HLX-STM-7SW3W3JDV/2023 | E | 308 | V | 60 | 20230221 |
| EPI_ISL_18982437 | NSP3 | hCoV-19/South Korea/KDCA287258/2024 | E | 308 | G | 117 | 20240220 |
| EPI_ISL_19705830 | NSP3 | hCoV-19/USA/UT-UPHL-250131668139/2025 | E | 308 | D | 200 | 20250127 |
| EPI_ISL_16525022 | NSP3 | hCoV-19/England/PHEC-YY8ANS3/2022 | E | 308 | Z | 27 | 20221231 |
| EPI_ISL_17709324 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000196418SP/2022 | E | 308 | insXX | 1 | 20220623 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | E | 308 | I | 1 | 20210424 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | E | 308 | S | 3 | 20211005 |
| EPI_ISL_19587155 | NSP3 | hCoV-19/Sweden/G-24-592465/2024 | E | 308 | Q | 21 | 20241112 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | E | 308 | del | 155 | 20250116 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | E | 308 | F | 1 | 20220112 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | E | 308 | T | 18 | 20230412 |
| EPI_ISL_19348671 | NSP3 | hCoV-19/Slovenia/IMI-V1-8682/2024 | E | 308 | stop | 13 | 20240801 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 308 | C | 1 | 20230108 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | E | 308 | N | 2 | 20210722 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | E | 308 | A | 79 | 20230220 |
| EPI_ISL_18691210 | NSP3 | hCoV-19/USA/PA-CDC-LC1075813/2023 | E | 308 | K | 52 | 20231206 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | E | 308 | H | 3 | 20221213 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | E | 308 | L | 4 | 20230217 |
| EPI_ISL_18572143 | NSP3 | hCoV-19/Italy/SIC-AOUME-UOSD-GCL-195633656-2021-2040/2021 | E | 308 | Y | 1 | 20210831 |
| EPI_ISL_19828130 | NSP3 | hCoV-19/Australia/QLD0x0154D4/2025 | D | 309 | G | 259 | 20250327 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | D | 309 | insNA | 7 | 20220829 |
| EPI_ISL_16329135 | NSP3 | hCoV-19/Germany/NW-RKI-I-1071712/2022 | D | 309 | V | 5 | 20221217 |
| EPI_ISL_19825388 | NSP3 | hCoV-19/USA/NM-NMDOH-2025007667/2025 | D | 309 | N | 654 | 20250225 |
| EPI_ISL_19610425 | NSP3 | hCoV-19/Canada/AB-ABPHL-128579/2024 | D | 309 | A | 75 | 20241127 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | D | 309 | P | 1 | 20221130 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | D | 309 | I | 4 | 20230217 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | D | 309 | del | 133 | 20250116 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | D | 309 | R | 4 | 20220128 |
| EPI_ISL_18560684 | NSP3 | hCoV-19/Sweden/C-03_SE600_300000127809N2/2023 | D | 309 | S | 33 | 20231118 |
| EPI_ISL_16592325 | NSP3 | hCoV-19/Germany/HB-RKI-I-1084543/2022 | D | 309 | H | 14 | 20221222 |
| EPI_ISL_19347880 | NSP3 | hCoV-19/Malaysia/MKAK_CL_55936/2024 | D | 309 | Y | 11363 | 20240724 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 309 | C | 2 | 20230101 |
| EPI_ISL_19392394 | NSP3 | hCoV-19/USA/CA-SEARCH-141213/2024 | D | 309 | E | 179 | 20240716 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | D | 309 | K | 46 | 20231007 |
| EPI_ISL_19526773 | NSP3 | hCoV-19/Germany/BY-LGL-6375300/2024 | D | 309 | B | 29 | 20241007 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 309 | T | 9 | 20230108 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | D | 309 | L | 2 | 20211006 |
| EPI_ISL_19646251 | NSP3 | hCoV-19/Israel/ICH-741227161/2024 | I | 310 | M | 162 | 20241220 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 310 | Y | 2 | 20210318 |
| EPI_ISL_19676301 | NSP3 | hCoV-19/Singapore/Y25R3MSC60/2025 | I | 310 | V | 947 | 20250113 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | I | 310 | D | 1 | 20210424 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | I | 310 | insstop | 1 | 20210809 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | I | 310 | stop | 3 | 20220630 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | I | 310 | H | 4 | 20220128 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | I | 310 | C | 1 | 20210909 |
| EPI_ISL_19195766 | NSP3 | hCoV-19/USA/VA-GBW-GKPLAAAA18250/2024 | I | 310 | L | 252 | 20240606 |
| EPI_ISL_19804507 | NSP3 | hCoV-19/Mexico/QUE_InDRE_F_14/2025 | I | 310 | T | 1186 | 20250115 |
| EPI_ISL_17446431 | NSP3 | hCoV-19/Denmark/DCGC-645513/2023 | I | 310 | J | 7 | 20230330 |
| EPI_ISL_18560684 | NSP3 | hCoV-19/Sweden/C-03_SE600_300000127809N2/2023 | I | 310 | A | 27 | 20231118 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | I | 310 | K | 1 | 20230217 |
| EPI_ISL_19430809 | NSP3 | hCoV-19/Slovenia/IMI-V1-10133/2024 | I | 310 | S | 345 | 20240910 |
| EPI_ISL_12029042 | NSP3 | hCoV-19/Italy/FVG-TS-38191397/2022 | I | 310 | insN | 1 | 20220404 |
| EPI_ISL_19289744 | NSP3 | hCoV-19/USA/CA-GBW-GKPLAAAA38167/2024 | I | 310 | F | 297 | 20240717 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | I | 310 | del | 154 | 20250116 |
| EPI_ISL_17988786 | NSP3 | hCoV-19/Slovakia/BB-0370/2023 | I | 310 | N | 34 | 20230413 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | I | 310 | Q | 3 | 20231007 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | Q | 311 | A | 2 | 20210918 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | Q | 311 | D | 2 | 20221118 |
| EPI_ISL_19750963 | NSP3 | hCoV-19/Germany/MV-RKI-I-1147741/2025 | Q | 311 | R | 393 | 20250210 |
| EPI_ISL_1836279 | NSP3 | hCoV-19/USA/CO-CDC-ASC210052534/2021 | Q | 311 | insKCP | 1 | 20210408 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | Q | 311 | Y | 2 | 20230217 |
| EPI_ISL_14954146 | NSP3 | hCoV-19/USA/TX-HMH-M-114943/2022 | Q | 311 | stop | 24 | 20220906 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 311 | M | 2 | 20220210 |
| EPI_ISL_18510302 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA9632-P0/2023 | Q | 311 | P | 18 | 20231103 |
| EPI_ISL_18358678 | NSP3 | hCoV-19/USA/NY-CDC-QDX85404723/2023 | Q | 311 | insQ | 1 | 20230920 |
| EPI_ISL_18698780 | NSP3 | hCoV-19/USA/NE-NPHL-2451/2023 | Q | 311 | E | 45 | 20231212 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | Q | 311 | S | 47 | 20220128 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 311 | V | 1 | 20210318 |
| EPI_ISL_18455304 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-16J-MM00050R/2023 | Q | 311 | H | 41 | 20231016 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | Q | 311 | del | 141 | 20250116 |
| EPI_ISL_18705550 | NSP3 | hCoV-19/Poland/Kce-1476/2023 | Q | 311 | K | 34 | 20231215 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | Q | 311 | N | 11 | 20220630 |
| EPI_ISL_16586904 | NSP3 | hCoV-19/England/PHEC-YY84XFM/2023 | Q | 311 | Z | 3 | 20230103 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | Q | 311 | C | 1 | 20230412 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | Q | 311 | T | 1 | 20210801 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | Q | 311 | F | 2 | 20200729 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | Q | 311 | I | 21 | 20230220 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | Q | 311 | W | 1 | 20210803 |
| EPI_ISL_15757930 | NSP3 | hCoV-19/Austria/LB-R00111-S004/2022 | Q | 311 | L | 18 | 20221107 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 312 | D | 1 | 20220210 |
| EPI_ISL_18687416 | NSP3 | hCoV-19/South Korea/KDCA277852/2023 | L | 312 | V | 61 | 20231122 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | L | 312 | T | 59 | 20220906 |
| EPI_ISL_18560684 | NSP3 | hCoV-19/Sweden/C-03_SE600_300000127809N2/2023 | L | 312 | M | 38 | 20231118 |
| EPI_ISL_19728366 | NSP3 | hCoV-19/Rwanda/GBW-VWPLBABC34427/2024 | L | 312 | R | 45 | 20240117 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | L | 312 | N | 2 | 20210803 |
| EPI_ISL_18895512 | NSP3 | hCoV-19/USA/IL-CDC-LC1094173/2024 | L | 312 | J | 15 | 20240129 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | L | 312 | C | 3 | 20220630 |
| EPI_ISL_19032958 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6409/2024 | L | 312 | P | 58 | 20240203 |
| EPI_ISL_19364501 | NSP3 | hCoV-19/Canada/QC-L00776231001/2024 | L | 312 | H | 28 | 20240819 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 312 | A | 2 | 20220210 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | L | 312 | S | 8 | 20221130 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 312 | K | 2 | 20230101 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | L | 312 | del | 141 | 20250116 |
| EPI_ISL_19823383 | NSP3 | hCoV-19/USA/NY-SUNYQB-X6029496/2025 | L | 312 | F | 20377 | 20250326 |
| EPI_ISL_19639120 | NSP3 | hCoV-19/USA/NM-NMDOH-036250/2024 | L | 312 | I | 420 | 20241103 |
| EPI_ISL_19540158 | NSP3 | hCoV-19/USA/WA-SFS-S25593/2023 | L | 313 | insL | 1 | 20230510 |
| EPI_ISL_19549579 | NSP3 | hCoV-19/Slovenia/IMI-V1-12516/2024 | L | 313 | I | 204 | 20241029 |
| EPI_ISL_4090869 | NSP3 | hCoV-19/USA/AZ-ASU13768/2021 | L | 313 | J | 3 | 20210901 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 313 | N | 2 | 20220210 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | L | 313 | E | 8 | 20220829 |
| EPI_ISL_18651378 | NSP3 | hCoV-19/Singapore/R92MR121/2023 | L | 313 | V | 63 | 20231212 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | L | 313 | M | 2 | 20230217 |
| EPI_ISL_19212841 | NSP3 | hCoV-19/env/India/MH-NCL-236-13/2023 | L | 313 | stop | 2 | 20231213 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | L | 313 | A | 2 | 20210722 |
| EPI_ISL_19251527 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00014612/2024 | L | 313 | P | 5 | 20240513 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 313 | G | 1 | 20211006 |
| EPI_ISL_19222155 | NSP3 | hCoV-19/Canada/AB-ABPHL-119007/2024 | L | 313 | F | 1611 | 20240611 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 313 | S | 49 | 20230108 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | L | 313 | T | 1 | 20211015 |
| EPI_ISL_15442014 | NSP3 | hCoV-19/Germany/NW-RKI-I-993716/2022 | L | 313 | H | 3 | 20220925 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | L | 313 | insstop | 1 | 20210802 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | L | 313 | R | 4 | 20230412 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 313 | D | 1 | 20220210 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | L | 313 | del | 130 | 20250116 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | K | 314 | V | 2 | 20220630 |
| EPI_ISL_18607832 | NSP3 | hCoV-19/USA/LA-EVTL20657/2023 | K | 314 | T | 44 | 20231127 |
| EPI_ISL_509412 | NSP3 | hCoV-19/Turkey/ACUTG-1/2020 | K | 314 | Q | 1 | 20200413 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | K | 314 | S | 12 | 20220829 |
| EPI_ISL_16815009 | NSP3 | hCoV-19/United Arab Emirates/BTC-5570/2021 | K | 314 | P | 1 | 20210530 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 314 | W | 7 | 20230108 |
| EPI_ISL_11887753 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0716/2021 | K | 314 | I | 2 | 20211229 |
| EPI_ISL_17958210 | NSP3 | hCoV-19/France/PAC-HCL723000852101/2023 | K | 314 | M | 32 | 20230612 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | K | 314 | stop | 46 | 20220128 |
| EPI_ISL_19828045 | NSP3 | hCoV-19/USA/CA-CDPH-500146235/2025 | K | 314 | R | 1045 | 20250131 |
| EPI_ISL_1469240 | NSP3 | hCoV-19/Indonesia/JI-NIHRD-WGS01186/2021 | K | 314 | H | 1 | 20210218 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | K | 314 | L | 4 | 20230412 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | K | 314 | del | 162 | 20250116 |
| EPI_ISL_19536736 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJUX5/2024 | K | 314 | N | 371 | 20241025 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | K | 314 | G | 2 | 20231007 |
| EPI_ISL_19681438 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147314/2024 | K | 314 | E | 216 | 20241230 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | S | 315 | del | 144 | 20250116 |
| EPI_ISL_10045295 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344412/2022 | S | 315 | Y | 1 | 20220207 |
| EPI_ISL_18226328 | NSP3 | hCoV-19/env/India/MH-FMR_D1-51a/2023 | S | 315 | E | 50 | 20230227 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | S | 315 | K | 21 | 20220906 |
| EPI_ISL_18967490 | NSP3 | hCoV-19/USA/DE-DHSS-B1333314/2024 | S | 315 | C | 18 | 20240219 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 315 | stop | 2 | 20230108 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | S | 315 | insXstopIL | 1 | 20210719 |
| EPI_ISL_18217101 | NSP3 | hCoV-19/Brazil/PE-FIOCRUZ-IAM15160/2023 | S | 315 | V | 5 | 20230707 |
| EPI_ISL_19827099 | NSP3 | hCoV-19/Chile/VS-ISPC-25768/2025 | S | 315 | R | 473 | 20250324 |
| EPI_ISL_19805250 | NSP3 | hCoV-19/Russia/SPE-RII-MH229769S/2025 | S | 315 | N | 330 | 20250318 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | S | 315 | D | 8 | 20220829 |
| EPI_ISL_19348975 | NSP3 | hCoV-19/USA/TX-HMH-M-143691/2024 | S | 315 | T | 61 | 20240727 |
| EPI_ISL_19698568 | NSP3 | hCoV-19/Greece/PHLnetwork_6094/2024 | S | 315 | G | 3641 | 20241104 |
| EPI_ISL_19784264 | NSP3 | hCoV-19/USA/NJ-GBW-GKISBBBE97816/2025 | S | 315 | I | 373 | 20250306 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | S | 315 | Q | 1 | 20210424 |
| EPI_ISL_18226328 | NSP3 | hCoV-19/env/India/MH-FMR_D1-51a/2023 | A | 316 | C | 52 | 20230227 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | A | 316 | F | 2 | 20221118 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | A | 316 | L | 5 | 20210804 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | A | 316 | H | 1 | 20230412 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | A | 316 | del | 145 | 20250116 |
| EPI_ISL_16815009 | NSP3 | hCoV-19/United Arab Emirates/BTC-5570/2021 | A | 316 | M | 2 | 20210530 |
| EPI_ISL_19691556 | NSP3 | hCoV-19/Canada/ON-PHL-202501840/2025 | A | 316 | T | 204 | 20250114 |
| EPI_ISL_19696818 | NSP3 | hCoV-19/Turkey/HSGM-AA000466/2024 | A | 316 | P | 4 | 20240302 |
| EPI_ISL_18927921 | NSP3 | hCoV-19/USA/TX-HMH-M-138741/2024 | A | 316 | S | 133 | 20240129 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | A | 316 | I | 2 | 20210806 |
| EPI_ISL_18560684 | NSP3 | hCoV-19/Sweden/C-03_SE600_300000127809N2/2023 | A | 316 | K | 34 | 20231118 |
| EPI_ISL_19334605 | NSP3 | hCoV-19/Egypt/CPHL-EGY24161/2024 | A | 316 | D | 13 | 20240625 |
| EPI_ISL_19374925 | NSP3 | hCoV-19/Belgium/Sciensano-LS-S5972/2024 | A | 316 | V | 292 | 20240805 |
| EPI_ISL_7547073 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100721-1038/2021 | A | 316 | R | 1 | 20211007 |
| EPI_ISL_14860153 | NSP3 | hCoV-19/Luxembourg/LNS4043379/2022 | A | 316 | G | 7 | 20220823 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | Y | 317 | insMLSAQMLTKV | 19 | 20230220 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Y | 317 | Q | 1 | 20220210 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | Y | 317 | V | 82 | 20250116 |
| EPI_ISL_18400448 | NSP3 | hCoV-19/Spain/GA-SCQ_23-254920/2023 | Y | 317 | H | 7 | 20230915 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | Y | 317 | P | 1 | 20211015 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | Y | 317 | insstopSA | 1 | 20210806 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | Y | 317 | A | 1 | 20210424 |
| EPI_ISL_13346743 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2332/2022 | Y | 317 | stop | 6 | 20220531 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | Y | 317 | F | 23 | 20230220 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 317 | T | 4 | 20230101 |
| EPI_ISL_10045295 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344412/2022 | Y | 317 | N | 4 | 20220207 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | Y | 317 | W | 1 | 20211229 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | Y | 317 | I | 3 | 20230412 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | Y | 317 | M | 4 | 20220630 |
| EPI_ISL_17174621 | NSP3 | hCoV-19/Germany/NW-RKI-I-1114849/2023 | Y | 317 | D | 17 | 20230225 |
| EPI_ISL_17081099 | NSP3 | hCoV-19/Canada/NS-NSH-599663/2023 | Y | 317 | C | 17 | 20230122 |
| EPI_ISL_19664387 | NSP3 | hCoV-19/USA/MN-MDH-45037/2024 | Y | 317 | del | 119 | 20241227 |
| EPI_ISL_18226328 | NSP3 | hCoV-19/env/India/MH-FMR_D1-51a/2023 | Y | 317 | L | 56 | 20230227 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 317 | K | 2 | 20220210 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | Y | 317 | S | 2 | 20210719 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 318 | M | 1 | 20220210 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | E | 318 | R | 5 | 20211015 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | E | 318 | insPKCstopQRstopR | 1 | 20210909 |
| EPI_ISL_8812967 | NSP3 | hCoV-19/USA/OR-TRACE-POLK-042521-1190/2021 | E | 318 | insILIST | 1 | 20210425 |
| EPI_ISL_13864693 | NSP3 | hCoV-19/Chile/RM-83917/2022 | E | 318 | Z | 2 | 20220703 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 318 | T | 3 | 20230108 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 318 | N | 3 | 20220210 |
| EPI_ISL_19829366 | NSP3 | hCoV-19/USA/CA-CDC-2-8365993/2025 | E | 318 | G | 177 | 20250210 |
| EPI_ISL_16473509 | NSP3 | hCoV-19/Singapore/R1NP71/2023 | E | 318 | Y | 1 | 20230105 |
| EPI_ISL_7547073 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100721-1038/2021 | E | 318 | S | 2 | 20211007 |
| EPI_ISL_17969768 | NSP3 | hCoV-19/South Korea/KDCA247684/2023 | E | 318 | V | 84 | 20230615 |
| EPI_ISL_19556140 | NSP3 | hCoV-19/Japan/FR302-1450/2024 | E | 318 | D | 53 | 20241002 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | E | 318 | I | 7 | 20220829 |
| EPI_ISL_19664387 | NSP3 | hCoV-19/USA/MN-MDH-45037/2024 | E | 318 | del | 154 | 20241227 |
| EPI_ISL_19527104 | NSP3 | hCoV-19/Thailand/CU-AMV106/2023 | E | 318 | Q | 5 | 20230905 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | E | 318 | F | 1 | 20210809 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | E | 318 | K | 1056 | 20250116 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | E | 318 | P | 3 | 20230412 |
| EPI_ISL_18226328 | NSP3 | hCoV-19/env/India/MH-FMR_D1-51a/2023 | E | 318 | stop | 71 | 20230227 |
| EPI_ISL_19771556 | NSP3 | hCoV-19/USA/NY-PRL-250304_81C07/2025 | E | 318 | A | 153 | 20250217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 319 | L | 1 | 20220210 |
| EPI_ISL_19827113 | NSP3 | hCoV-19/Chile/ML-ISPC-26308/2025 | N | 319 | S | 665 | 20250324 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | N | 319 | A | 9 | 20220829 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | N | 319 | B | 9 | 20230217 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | N | 319 | T | 252 | 20250116 |
| EPI_ISL_16815009 | NSP3 | hCoV-19/United Arab Emirates/BTC-5570/2021 | N | 319 | P | 1 | 20210530 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 319 | E | 1 | 20210318 |
| EPI_ISL_19664387 | NSP3 | hCoV-19/USA/MN-MDH-45037/2024 | N | 319 | del | 144 | 20241227 |
| EPI_ISL_10995074 | NSP3 | hCoV-19/England/DHSC-CYDZDB7/2022 | N | 319 | C | 1 | 20220223 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 319 | F | 5 | 20230108 |
| EPI_ISL_4389954 | NSP3 | hCoV-19/USA/KS-KSU-2993/2021 | N | 319 | Q | 2 | 20210823 |
| EPI_ISL_19416230 | NSP3 | hCoV-19/USA/NJ-PHEL-V24009614/2024 | N | 319 | K | 106 | 20240716 |
| EPI_ISL_16541709 | NSP3 | hCoV-19/Brazil/MG_LBI-1357/2021 | N | 319 | insXX | 1 | 20210118 |
| EPI_ISL_18664541 | NSP3 | hCoV-19/USA/WV-WVU-WV138506/2023 | N | 319 | Y | 51 | 20231019 |
| EPI_ISL_18496135 | NSP3 | hCoV-19/Japan/PG-581209/2023 | N | 319 | D | 507 | 20231021 |
| EPI_ISL_18579872 | NSP3 | hCoV-19/Russia/KL-RII-MH147800S/2023 | N | 319 | H | 116 | 20231016 |
| EPI_ISL_19315762 | NSP3 | hCoV-19/Malaysia/MKAI-6772841/2024 | N | 319 | I | 18 | 20240709 |
| EPI_ISL_7507369 | NSP3 | hCoV-19/USA/CA-CSMC19/2021 | N | 319 | G | 1 | 20210630 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | N | 319 | R | 6 | 20220906 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | F | 320 | W | 3 | 20231007 |
| EPI_ISL_10277633 | NSP3 | hCoV-19/USA/OH-CDC-FG-273429/2022 | F | 320 | I | 5 | 20220207 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | F | 320 | A | 3 | 20230412 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | F | 320 | N | 1 | 20220210 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | F | 320 | stop | 8 | 20220906 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | F | 320 | G | 1 | 20211006 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | F | 320 | T | 7 | 20220829 |
| EPI_ISL_19042792 | NSP3 | hCoV-19/Chile/NB-ISP-17915/2024 | F | 320 | L | 191 | 20240301 |
| EPI_ISL_19021280 | NSP3 | hCoV-19/Pakistan/KMU_PHRL-1224/2024 | F | 320 | S | 8 | 20240321 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 320 | E | 1 | 20210318 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | F | 320 | Y | 18 | 20230101 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | F | 320 | V | 21 | 20231218 |
| EPI_ISL_17349545 | NSP3 | hCoV-19/India/KA-VRDL-33409/2023 | F | 320 | C | 5 | 20230224 |
| EPI_ISL_19537277 | NSP3 | hCoV-19/Canada/ON-KHS-05306-v1/2024 | F | 320 | del | 127 | 20241031 |
| EPI_ISL_18444906 | NSP3 | hCoV-19/Singapore/R77MR7/2023 | N | 321 | B | 13 | 20231018 |
| EPI_ISL_19483880 | NSP3 | hCoV-19/Netherlands/NH-RIVM-142858/2024 | N | 321 | S | 183 | 20240923 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | N | 321 | insA | 1 | 20210804 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | N | 321 | stop | 56 | 20220630 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | N | 321 | A | 3 | 20221213 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | N | 321 | G | 2 | 20230412 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | N | 321 | E | 1 | 20210722 |
| EPI_ISL_11992228 | NSP3 | hCoV-19/Chile/RM-122408/2021 | N | 321 | M | 1 | 20210707 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | N | 321 | del | 103 | 20230418 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 321 | K | 13 | 20230108 |
| EPI_ISL_16978365 | NSP3 | hCoV-19/England/QEUH-326CC2DE/2023 | N | 321 | Y | 15 | 20230208 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | N | 321 | V | 1 | 20211006 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 321 | L | 2 | 20230101 |
| EPI_ISL_17530377 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1756/2023 | N | 321 | R | 4 | 20230411 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | N | 321 | I | 10 | 20231017 |
| EPI_ISL_10313661 | NSP3 | hCoV-19/France/GES-HMN-22022041174/2022 | N | 321 | T | 5 | 20220117 |
| EPI_ISL_18109094 | NSP3 | hCoV-19/Canary Islands/CHUIMI-021439882967/2023 | N | 321 | D | 76 | 20230806 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 321 | insSLCRYC | 1 | 20230108 |
| EPI_ISL_17764844 | NSP3 | hCoV-19/USA/AZ-ASU102794/2023 | N | 321 | H | 16 | 20230524 |
| EPI_ISL_2382543 | NSP3 | hCoV-19/Brazil/RS-LMM54340/2021 | N | 321 | C | 2 | 20210422 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | Q | 322 | S | 64 | 20231017 |
| EPI_ISL_18491412 | NSP3 | hCoV-19/Greece/9517/2023 | Q | 322 | P | 29 | 20230918 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | Q | 322 | Y | 1 | 20211229 |
| EPI_ISL_19770385 | NSP3 | hCoV-19/Spain/AS-HUCA-232518204/2025 | Q | 322 | K | 146 | 20250303 |
| EPI_ISL_19750811 | NSP3 | hCoV-19/Japan/FR021-0150/2025 | Q | 322 | L | 526 | 20250206 |
| EPI_ISL_16648430 | NSP3 | hCoV-19/Ireland/SO-NVRL-S22IRL00484792/2022 | Q | 322 | E | 40 | 20221230 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | Q | 322 | del | 93 | 20230418 |
| EPI_ISL_19621630 | NSP3 | hCoV-19/France/ARA-HCL024185944101/2024 | Q | 322 | R | 981 | 20241128 |
| EPI_ISL_19705857 | NSP3 | hCoV-19/USA/UT-UPHL-250131642963/2025 | Q | 322 | stop | 103 | 20250119 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 322 | A | 2 | 20220210 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | Q | 322 | F | 118 | 20250116 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Q | 322 | T | 1 | 20220210 |
| EPI_ISL_19822454 | NSP3 | hCoV-19/Australia/QLD0x015451/2025 | Q | 322 | H | 1340 | 20250320 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | Q | 322 | Z | 4 | 20240105 |
| EPI_ISL_11406409 | NSP3 | hCoV-19/Brazil/AP-ITV-179380/2021 | Q | 322 | N | 1 | 20210607 |
| EPI_ISL_2144859 | NSP3 | hCoV-19/USA/FL-CDC-STM-000065735/2021 | Q | 322 | W | 1 | 20210429 |
| EPI_ISL_19792529 | NSP3 | hCoV-19/Mauritius/MHW-12291/2025 | H | 323 | N | 1886 | 20250115 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | H | 323 | F | 1 | 20211005 |
| EPI_ISL_19826038 | NSP3 | hCoV-19/Singapore/Y25R15MSC122/2025 | H | 323 | Y | 4100 | 20250408 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | H | 323 | K | 2 | 20210803 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | H | 323 | T | 7 | 20231017 |
| EPI_ISL_19683931 | NSP3 | hCoV-19/USA/CO-CDPHE-42779822/2024 | H | 323 | Q | 286 | 20241231 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | H | 323 | del | 100 | 20230418 |
| EPI_ISL_19826673 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528540/2025 | H | 323 | R | 326 | 20250326 |
| EPI_ISL_13747413 | NSP3 | hCoV-19/Finland/THL-202214181/2022 | H | 323 | D | 1 | 20220527 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | H | 323 | E | 1 | 20211229 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | H | 323 | G | 2 | 20231218 |
| EPI_ISL_12320637 | NSP3 | hCoV-19/Turkey/HSGM-GS2058/2022 | H | 323 | P | 3 | 20220410 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | H | 323 | L | 116 | 20250116 |
| EPI_ISL_19092390 | NSP3 | hCoV-19/USA/UT-UPHL-240124416408/2023 | H | 323 | C | 1 | 20231228 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | H | 323 | I | 1 | 20230412 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | H | 323 | stop | 1 | 20210909 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | H | 323 | M | 1 | 20210722 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 323 | V | 1 | 20220210 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | H | 323 | A | 57 | 20220630 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | H | 323 | S | 3 | 20210804 |
| EPI_ISL_19781843 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-031281/2025 | E | 324 | K | 923 | 20250228 |
| EPI_ISL_18867179 | NSP3 | hCoV-19/England/CLIMB-CM7YMX57/2024 | E | 324 | Q | 155 | 20240122 |
| EPI_ISL_17466166 | NSP3 | hCoV-19/India/CT-AIIMSR-VRDL-INSACOG-1165/2023 | E | 324 | stop | 326 | 20230404 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | E | 324 | W | 6 | 20220906 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | E | 324 | del | 103 | 20230418 |
| EPI_ISL_19826673 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528540/2025 | E | 324 | S | 9 | 20250326 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | E | 324 | R | 171 | 20250116 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 324 | Y | 2 | 20230101 |
| EPI_ISL_19411793 | NSP3 | hCoV-19/Australia/QLD0x01491F/2024 | E | 324 | G | 438 | 20240809 |
| EPI_ISL_7507369 | NSP3 | hCoV-19/USA/CA-CSMC19/2021 | E | 324 | I | 1 | 20210630 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | E | 324 | T | 1 | 20230217 |
| EPI_ISL_19158738 | NSP3 | hCoV-19/USA/CO-CDPHE-41887914/2024 | E | 324 | A | 137 | 20240501 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | E | 324 | Z | 21 | 20230217 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | E | 324 | H | 3 | 20210806 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | E | 324 | L | 2 | 20230217 |
| EPI_ISL_19544422 | NSP3 | hCoV-19/Spain/AN-PMC-42279/2024 | E | 324 | V | 92 | 20241016 |
| EPI_ISL_19781295 | NSP3 | hCoV-19/Slovenia/IMI-V1-2857/2025 | E | 324 | D | 463 | 20250302 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 325 | Y | 2 | 20230101 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | V | 325 | del | 87 | 20230418 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | V | 325 | G | 6 | 20231007 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | V | 325 | T | 1 | 20210804 |
| EPI_ISL_19826673 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528540/2025 | V | 325 | S | 67 | 20250326 |
| EPI_ISL_19793823 | NSP3 | hCoV-19/Canada/AB-ABPHL-131422/2025 | V | 325 | A | 211 | 20250224 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | V | 325 | Q | 1 | 20210809 |
| EPI_ISL_19123862 | NSP3 | hCoV-19/Denmark/DCGC-679557/2022 | V | 325 | insNFAL | 2 | 20220314 |
| EPI_ISL_19781684 | NSP3 | hCoV-19/USA/NE-RP251951/2025 | V | 325 | I | 709 | 20250305 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 325 | N | 1 | 20220210 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 325 | D | 7 | 20231218 |
| EPI_ISL_19232958 | NSP3 | hCoV-19/Spain/IB-HUSE-09343/2024 | V | 325 | L | 80 | 20240531 |
| EPI_ISL_18345686 | NSP3 | hCoV-19/env/Ukraine/80015/2023 | V | 325 | C | 4 | 20230515 |
| EPI_ISL_18398625 | NSP3 | hCoV-19/England/CLIMB-CM7YRZA8/2023 | V | 325 | M | 3 | 20231007 |
| EPI_ISL_19824925 | NSP3 | hCoV-19/Italy/FVG-TS-65332824/2025 | V | 325 | F | 11951 | 20250308 |
| EPI_ISL_18635196 | NSP3 | hCoV-19/Finland/THL-09404/2023 | L | 326 | S | 62 | 20231118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 326 | G | 1 | 20220210 |
| EPI_ISL_19826673 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528540/2025 | L | 326 | T | 9 | 20250326 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | L | 326 | del | 86 | 20230418 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | L | 326 | insHHYYQ | 1 | 20210802 |
| EPI_ISL_19613476 | NSP3 | hCoV-19/Spain/MD-HULP-200533010/2024 | L | 326 | V | 38 | 20241129 |
| EPI_ISL_19669240 | NSP3 | hCoV-19/Japan/TKYnat18238/2024 | L | 326 | I | 126 | 20241221 |
| EPI_ISL_19816949 | NSP3 | hCoV-19/Norway/3835/2025 | L | 326 | P | 12 | 20250303 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | L | 326 | F | 3 | 20211015 |
| EPI_ISL_19770385 | NSP3 | hCoV-19/Spain/AS-HUCA-232518204/2025 | L | 326 | J | 61 | 20250303 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | L | 326 | C | 1 | 20210804 |
| EPI_ISL_18226332 | NSP3 | hCoV-19/env/India/MH-FMR_D1-55a/2023 | L | 326 | H | 3 | 20230315 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 326 | D | 1 | 20210318 |
| EPI_ISL_18778078 | NSP3 | hCoV-19/USA/MD-MDH-9675/2023 | L | 326 | Q | 18 | 20231208 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 326 | E | 1 | 20211006 |
| EPI_ISL_17226085 | NSP3 | hCoV-19/Sweden/03_SE600_000200547131N2/2023 | L | 326 | insXXX | 1 | 20230307 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | L | 326 | Y | 19 | 20231017 |
| EPI_ISL_18883588 | NSP3 | hCoV-19/USA/NY-UB-CHS-04130/2023 | L | 327 | V | 36 | 20231010 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 327 | H | 1 | 20220210 |
| EPI_ISL_19778663 | NSP3 | hCoV-19/USA/CA-PFZ04632/2025 | L | 327 | F | 926 | 20250216 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | L | 327 | stop | 1 | 20210909 |
| EPI_ISL_10397171 | NSP3 | hCoV-19/Turkey/HSGM-G1605/2022 | L | 327 | S | 3 | 20220214 |
| EPI_ISL_19550980 | NSP3 | hCoV-19/Australia/SA-2100835/2024 | L | 327 | P | 5 | 20241106 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | L | 327 | N | 1 | 20210804 |
| EPI_ISL_8812967 | NSP3 | hCoV-19/USA/OR-TRACE-POLK-042521-1190/2021 | L | 327 | Q | 1 | 20210425 |
| EPI_ISL_19826673 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528540/2025 | L | 327 | C | 9 | 20250326 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | L | 327 | del | 88 | 20231218 |
| EPI_ISL_10145597 | NSP3 | hCoV-19/USA/TN-ASC-210695201/2022 | L | 327 | R | 3 | 20220208 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 327 | A | 1 | 20220210 |
| EPI_ISL_5309844 | NSP3 | hCoV-19/Sweden/UUH-000200131504/2021 | L | 327 | insXX | 1 | 20210826 |
| EPI_ISL_19465990 | NSP3 | hCoV-19/USA/MD-MDH-10737/2024 | L | 327 | I | 244 | 20240915 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | L | 327 | M | 128 | 20250116 |
| EPI_ISL_17411793 | NSP3 | hCoV-19/USA/NY-GBW-H10-002-5439/2023 | L | 327 | T | 58 | 20230327 |
| EPI_ISL_18875606 | NSP3 | hCoV-19/monkey/Denmark/SSI-H68/2023 | L | 327 | J | 9 | 20231006 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | L | 327 | insKFstop | 1 | 20210909 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | A | 328 | K | 122 | 20250116 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | A | 328 | H | 4 | 20231017 |
| EPI_ISL_10858520 | NSP3 | hCoV-19/Turkey/HSGM-G2424/2022 | A | 328 | E | 4 | 20220217 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | A | 328 | del | 86 | 20231218 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | A | 328 | Q | 6 | 20220906 |
| EPI_ISL_12584102 | NSP3 | hCoV-19/Turkey/HSGM-GS2934/2022 | A | 328 | P | 7 | 20220407 |
| EPI_ISL_19826673 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528540/2025 | A | 328 | T | 3329 | 20250326 |
| EPI_ISL_18322268 | NSP3 | hCoV-19/USA/TX-HMH-M-133534/2023 | A | 328 | G | 22 | 20230908 |
| EPI_ISL_19710288 | NSP3 | hCoV-19/Netherlands/NH-RIVM-144984/2025 | A | 328 | S | 216 | 20250106 |
| EPI_ISL_19071442 | NSP3 | hCoV-19/Japan/FR024-0004/2024 | A | 328 | V | 607 | 20240325 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | A | 328 | L | 3 | 20230412 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | A | 328 | F | 5 | 20210809 |
| EPI_ISL_17715103 | NSP3 | hCoV-19/India/UP-MRU-ICMR-86/2023 | A | 328 | C | 60 | 20230425 |
| EPI_ISL_13988758 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-3006/2022 | P | 329 | M | 1 | 20220624 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | P | 329 | Q | 21 | 20231218 |
| EPI_ISL_18345686 | NSP3 | hCoV-19/env/Ukraine/80015/2023 | P | 329 | C | 1 | 20230515 |
| EPI_ISL_14875278 | NSP3 | hCoV-19/Japan/PG-338614/2022 | P | 329 | L | 21 | 20220815 |
| EPI_ISL_17324397 | NSP3 | hCoV-19/Indonesia/JK-CW62-4036/2023 | P | 329 | insQ | 1 | 20230302 |
| EPI_ISL_19391123 | NSP3 | hCoV-19/USA/MT-MTPHL-4161808/2024 | P | 329 | T | 238 | 20240816 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | P | 329 | K | 1 | 20210918 |
| EPI_ISL_7410946 | NSP3 | hCoV-19/USA/IL-CDC-ASC210457006/2021 | P | 329 | insPPSTE | 1 | 20211112 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | P | 329 | A | 2 | 20220210 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | P | 329 | N | 1 | 20211229 |
| EPI_ISL_13996124 | NSP3 | hCoV-19/env/USA/CA-SEARCH-91168/2022 | P | 329 | R | 4 | 20220517 |
| EPI_ISL_18936260 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00173/2023 | P | 329 | del | 95 | 20230424 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | P | 329 | V | 4 | 20210722 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | P | 329 | H | 4 | 20231017 |
| EPI_ISL_16284105 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223292480/2022 | P | 329 | insQHEVLLAP | 1 | 20221125 |
| EPI_ISL_19802392 | NSP3 | hCoV-19/USA/CO-CDPHE-43210626/2025 | P | 329 | S | 1417 | 20250313 |
| EPI_ISL_12078984 | NSP3 | hCoV-19/France/OCC-GENBIO-X96GN0800316/2022 | P | 329 | insP | 1 | 20220323 |
| EPI_ISL_4109606 | NSP3 | hCoV-19/Italy/CAM-RD20702687115/2021 | P | 329 | F | 4 | 20210825 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 329 | E | 1 | 20211006 |
| EPI_ISL_19826673 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528540/2025 | P | 329 | I | 134 | 20250326 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | L | 330 | K | 3 | 20210918 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | L | 330 | A | 1 | 20230412 |
| EPI_ISL_19629932 | NSP3 | hCoV-19/USA/NY-URMC-O9S1T269-1/2024 | L | 330 | V | 163 | 20240921 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | L | 330 | T | 4 | 20240319 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | L | 330 | M | 7 | 20220906 |
| EPI_ISL_17713677 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200491614N2/2022 | L | 330 | insXX | 1 | 20221116 |
| EPI_ISL_10924509 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11593/2022 | L | 330 | E | 4 | 20220226 |
| EPI_ISL_10374154 | NSP3 | hCoV-19/USA/PA-CDC-STM-RF4V5VCJE/2022 | L | 330 | P | 3 | 20220208 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | L | 330 | R | 2 | 20210909 |
| EPI_ISL_3043939 | NSP3 | hCoV-19/Germany/HE-RKI-I-187469/2021 | L | 330 | insD | 1 | 20210705 |
| EPI_ISL_19260758 | NSP3 | hCoV-19/South Africa/1068257/2022 | L | 330 | J | 3 | 20220628 |
| EPI_ISL_18269030 | NSP3 | hCoV-19/USA/MS-MSPHL-0559/2023 | L | 330 | F | 11 | 20230817 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | L | 330 | Y | 6 | 20231017 |
| EPI_ISL_19826673 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528540/2025 | L | 330 | I | 91 | 20250326 |
| EPI_ISL_18936260 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00173/2023 | L | 330 | del | 98 | 20230424 |
| EPI_ISL_2382543 | NSP3 | hCoV-19/Brazil/RS-LMM54340/2021 | L | 330 | Q | 3 | 20210422 |
| EPI_ISL_19232142 | NSP3 | hCoV-19/env/Ukraine/86022/2024 | L | 330 | S | 19 | 20240429 |
| EPI_ISL_19826673 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528540/2025 | L | 331 | I | 221 | 20250326 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 331 | N | 1 | 20210318 |
| EPI_ISL_17713259 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200467132N2/2022 | L | 331 | J | 4 | 20220922 |
| EPI_ISL_4051963 | NSP3 | hCoV-19/Brazil/RS-LMM61974/2021 | L | 331 | R | 1 | 20210623 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 331 | T | 2 | 20211006 |
| EPI_ISL_1469240 | NSP3 | hCoV-19/Indonesia/JI-NIHRD-WGS01186/2021 | L | 331 | stop | 1 | 20210218 |
| EPI_ISL_17850897 | NSP3 | hCoV-19/Yunnan/YNCDC-1444/2023 | L | 331 | F | 22 | 20230615 |
| EPI_ISL_2382543 | NSP3 | hCoV-19/Brazil/RS-LMM54340/2021 | L | 331 | A | 3 | 20210422 |
| EPI_ISL_18254591 | NSP3 | hCoV-19/Romania/B-550373/2023 | L | 331 | S | 11 | 20230413 |
| EPI_ISL_19327054 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YEBR5/2024 | L | 331 | V | 47 | 20240715 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 331 | G | 1 | 20220210 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | L | 331 | K | 9 | 20220829 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | L | 331 | Y | 7 | 20231017 |
| EPI_ISL_17780583 | NSP3 | hCoV-19/Italy/LOM_Unimi-2244/2023 | L | 331 | insL | 36 | 20230523 |
| EPI_ISL_18825105 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YR15I/2024 | L | 331 | del | 213 | 20240114 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | S | 332 | H | 1 | 20210806 |
| EPI_ISL_2017473 | NSP3 | hCoV-19/Brazil/GO-HLAGYN-1591247/2021 | S | 332 | D | 1 | 20210404 |
| EPI_ISL_1391010 | NSP3 | hCoV-19/Indonesia/NT-NIHRD-C002122961/2021 | S | 332 | Y | 1 | 20210204 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | S | 332 | G | 2 | 20220210 |
| EPI_ISL_17474972 | NSP3 | hCoV-19/Sweden/03_SE600_000200506983N2/2022 | S | 332 | insXXX | 1 | 20221215 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 332 | N | 1 | 20220210 |
| EPI_ISL_12084017 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-63/2021 | S | 332 | insI | 1 | 20210122 |
| EPI_ISL_19504199 | NSP3 | hCoV-19/Canada/AB-ABPHL-124327/2024 | S | 332 | T | 45 | 20241002 |
| EPI_ISL_19823364 | NSP3 | hCoV-19/USA/NY-SUNYQB-X1363550/2025 | S | 332 | L | 719 | 20250315 |
| EPI_ISL_2382543 | NSP3 | hCoV-19/Brazil/RS-LMM54340/2021 | S | 332 | E | 4 | 20210422 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | S | 332 | K | 9 | 20210918 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | S | 332 | V | 13 | 20220829 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | S | 332 | C | 1 | 20210319 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | S | 332 | Q | 4 | 20231017 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | S | 332 | del | 138 | 20231218 |
| EPI_ISL_15292746 | NSP3 | hCoV-19/India/GA-NCCS-3055200227017/2021 | S | 332 | stop | 4 | 20211223 |
| EPI_ISL_19681251 | NSP3 | hCoV-19/Germany/BW-RKI-I-1147119/2024 | S | 332 | P | 419 | 20241218 |
| EPI_ISL_17715103 | NSP3 | hCoV-19/India/UP-MRU-ICMR-86/2023 | S | 332 | I | 64 | 20230425 |
| EPI_ISL_19508218 | NSP3 | hCoV-19/Germany/BB-RKI-I-1145281/2024 | S | 332 | A | 280 | 20240930 |
| EPI_ISL_11056859 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-7026/2022 | A | 333 | F | 4 | 20220124 |
| EPI_ISL_10924509 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11593/2022 | A | 333 | stop | 4 | 20220226 |
| EPI_ISL_11168341 | NSP3 | hCoV-19/USA/NC-WFSM-1086-2167/2022 | A | 333 | insKFYLHHYYL | 1 | 20220222 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 333 | Q | 4 | 20211006 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | A | 333 | Y | 1 | 20230217 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | A | 333 | del | 139 | 20231218 |
| EPI_ISL_17962885 | NSP3 | hCoV-19/Austria/AGES-1140509/2023 | A | 333 | P | 6 | 20230626 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | A | 333 | L | 14 | 20231017 |
| EPI_ISL_3873624 | NSP3 | hCoV-19/Brazil/RS-LMM61922/2021 | A | 333 | E | 1 | 20210309 |
| EPI_ISL_6010409 | NSP3 | hCoV-19/Israel/SMC-7014138/2021 | A | 333 | insSA | 1 | 20210822 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | A | 333 | T | 1374 | 20250116 |
| EPI_ISL_14531770 | NSP3 | hCoV-19/USA/CA-HLX-STM-87UWEGGPM/2022 | A | 333 | I | 1 | 20220724 |
| EPI_ISL_19287647 | NSP3 | hCoV-19/Russia/PRI-P596/2024 | A | 333 | G | 24 | 20240314 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | A | 333 | C | 1 | 20230217 |
| EPI_ISL_19805713 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U790-1/2025 | A | 333 | V | 5259 | 20250311 |
| EPI_ISL_1544038 | NSP3 | hCoV-19/India/MH-NCCS-137236/2021 | A | 333 | K | 2 | 20210226 |
| EPI_ISL_19122565 | NSP3 | hCoV-19/Australia/QLD0x014383/2024 | A | 333 | D | 118 | 20240413 |
| EPI_ISL_11780152 | NSP3 | hCoV-19/Netherlands/DR-GD-02795041/2022 | A | 333 | insGRRR | 1 | 20220228 |
| EPI_ISL_19680117 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09644/2024 | A | 333 | S | 506 | 20241219 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | G | 334 | L | 6 | 20230217 |
| EPI_ISL_19664342 | NSP3 | hCoV-19/USA/MN-MDH-44992/2024 | G | 334 | D | 1318 | 20241220 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | G | 334 | N | 6 | 20220906 |
| EPI_ISL_14869791 | NSP3 | hCoV-19/USA/UT-UPHL-220901309173/2022 | G | 334 | R | 6 | 20220728 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | G | 334 | del | 159 | 20231218 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | G | 334 | I | 4 | 20220210 |
| EPI_ISL_12291394 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1128/2022 | G | 334 | F | 1 | 20220125 |
| EPI_ISL_5324100 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324675_CAM_IZSM_COLLI_TIGEM/2021 | G | 334 | T | 3 | 20210916 |
| EPI_ISL_18218114 | NSP3 | hCoV-19/Japan/PG-555979/2023 | G | 334 | A | 5 | 20230727 |
| EPI_ISL_18915850 | NSP3 | hCoV-19/USA/CO-CDPHE-41673212/2024 | G | 334 | C | 397 | 20240105 |
| EPI_ISL_18413596 | NSP3 | hCoV-19/USA/CA-CDPH-500123440/2023 | G | 334 | V | 71 | 20230818 |
| EPI_ISL_11944357 | NSP3 | hCoV-19/England/DHSC-CYN79H9/2022 | G | 334 | insFYLHHYYstopL | 1 | 20220102 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | G | 334 | H | 2 | 20220210 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | G | 334 | insFYLHHYYQL | 5 | 20220105 |
| EPI_ISL_19803557 | NSP3 | hCoV-19/USA/WI-WSLH-2500760/2025 | G | 334 | S | 1375 | 20250210 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | G | 334 | E | 2 | 20230412 |
| EPI_ISL_17715103 | NSP3 | hCoV-19/India/UP-MRU-ICMR-86/2023 | G | 334 | W | 64 | 20230425 |
| EPI_ISL_6002726 | NSP3 | hCoV-19/Nigeria/CV3322/2021 | G | 334 | insFYLHHYC | 2 | 20210901 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | G | 334 | K | 125 | 20250116 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | G | 334 | Y | 2 | 20210809 |
| EPI_ISL_18379040 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000208989SP/2022 | G | 334 | insSTXTIIISW | 1 | 20221118 |
| EPI_ISL_15149176 | NSP3 | hCoV-19/Germany/NW-RKI-I-985769/2022 | I | 335 | N | 16 | 20220918 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | I | 335 | insYLHHYYQLVF | 1 | 20220213 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | I | 335 | F | 135 | 20250116 |
| EPI_ISL_19565198 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000590001/2024 | I | 335 | S | 33 | 20241031 |
| EPI_ISL_19613227 | NSP3 | hCoV-19/Thailand/MTM_01_1710/2024 | I | 335 | T | 365 | 20240601 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | I | 335 | K | 1 | 20220210 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | I | 335 | H | 1 | 20230412 |
| EPI_ISL_19825268 | NSP3 | hCoV-19/USA/NY-NYULH-22548/2025 | I | 335 | V | 3894 | 20250406 |
| EPI_ISL_12916310 | NSP3 | hCoV-19/USA/un-b57ea41d2d09011/2021 | I | 335 | stop | 1 | 20210519 |
| EPI_ISL_18740401 | NSP3 | hCoV-19/Croatia/HZJZ_6228/2023 | I | 335 | M | 65 | 20231121 |
| EPI_ISL_18546840 | NSP3 | hCoV-19/USA/TX-HMH-M-135488/2023 | I | 335 | J | 1 | 20231109 |
| EPI_ISL_17715103 | NSP3 | hCoV-19/India/UP-MRU-ICMR-86/2023 | I | 335 | Y | 70 | 20230425 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | I | 335 | del | 143 | 20231218 |
| EPI_ISL_19365370 | NSP3 | hCoV-19/Japan/FR084-0107/2024 | I | 335 | L | 21 | 20240729 |
| EPI_ISL_2375508 | NSP3 | hCoV-19/Brazil/RS-LMM53991/2021 | I | 335 | insR | 1 | 20210417 |
| EPI_ISL_15252618 | NSP3 | hCoV-19/Spain/AS-252275604/2022 | I | 335 | R | 2 | 20220919 |
| EPI_ISL_12916310 | NSP3 | hCoV-19/USA/un-b57ea41d2d09011/2021 | F | 336 | H | 2 | 20210519 |
| EPI_ISL_8347921 | NSP3 | hCoV-19/Denmark/DCGC-293883/2021 | F | 336 | insV | 1 | 20211227 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | F | 336 | insLHHYY | 1 | 20230415 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | F | 336 | stop | 1 | 20210628 |
| EPI_ISL_9419394 | NSP3 | hCoV-19/India/AN-ICMR-NIV-INSACOG-GSEQ-8564/2022 | F | 336 | T | 1 | 20220110 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | F | 336 | Q | 2 | 20230412 |
| EPI_ISL_15149176 | NSP3 | hCoV-19/Germany/NW-RKI-I-985769/2022 | F | 336 | N | 2 | 20220918 |
| EPI_ISL_19771754 | NSP3 | hCoV-19/USA/NY-Wadsworth-25010079-01/2025 | F | 336 | Y | 133 | 20250116 |
| EPI_ISL_16902689 | NSP3 | hCoV-19/South Korea/KDCA203737/2023 | F | 336 | V | 64 | 20230111 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | F | 336 | del | 119 | 20231218 |
| EPI_ISL_7637898 | NSP3 | hCoV-19/Greece/312019/2021 | F | 336 | A | 6 | 20211125 |
| EPI_ISL_19425715 | NSP3 | hCoV-19/USA/TX-HMH-M-145328/2024 | F | 336 | S | 21 | 20240820 |
| EPI_ISL_19757691 | NSP3 | hCoV-19/USA/NY-WMC-6296/2024 | F | 336 | L | 103 | 20240915 |
| EPI_ISL_8598741 | NSP3 | hCoV-19/Spain/AS-272128029/2021 | F | 336 | P | 1 | 20211218 |
| EPI_ISL_10924599 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11766/2022 | F | 336 | W | 3 | 20220227 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | F | 336 | E | 6 | 20220906 |
| EPI_ISL_16122292 | NSP3 | hCoV-19/Italy/SIC-CQRC-3422065934/2022 | F | 336 | I | 5 | 20221109 |
| EPI_ISL_15252618 | NSP3 | hCoV-19/Spain/AS-252275604/2022 | F | 336 | M | 1 | 20220919 |
| EPI_ISL_19748793 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00022201_01/2024 | F | 336 | C | 35 | 20240917 |
| EPI_ISL_2375843 | NSP3 | hCoV-19/Brazil/RS-LMM54198/2021 | F | 336 | R | 2 | 20210419 |
| EPI_ISL_12112859 | NSP3 | hCoV-19/Australia/VIC49783/2022 | F | 336 | insF | 1 | 20220330 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 336 | G | 1 | 20210318 |
| EPI_ISL_1533824 | NSP3 | hCoV-19/Sri Lanka/CMC86811/2021 | F | 336 | insDHNY | 1 | 20210315 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | G | 337 | N | 1 | 20230412 |
| EPI_ISL_6250500 | NSP3 | hCoV-19/Chile/LR-UACH-00509/2021 | G | 337 | stop | 1 | 20211029 |
| EPI_ISL_18052471 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YJWXQ/2023 | G | 337 | F | 11 | 20230705 |
| EPI_ISL_18821848 | NSP3 | hCoV-19/Spain/MC-HCUVA-39518235/2024 | G | 337 | V | 151 | 20240102 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 337 | K | 1 | 20210318 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | G | 337 | I | 2 | 20210909 |
| EPI_ISL_19650380 | NSP3 | hCoV-19/France/GES-RELAB-IPP14271/2024 | G | 337 | S | 1300 | 20241203 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | G | 337 | P | 1 | 20210628 |
| EPI_ISL_19802269 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10961/2025 | G | 337 | C | 8610 | 20250311 |
| EPI_ISL_2375846 | NSP3 | hCoV-19/Brazil/RS-LMM54273/2021 | G | 337 | insEV | 1 | 20210419 |
| EPI_ISL_18560660 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200650068N2/2023 | G | 337 | W | 98 | 20231117 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | G | 337 | del | 170 | 20231218 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | G | 337 | E | 7 | 20220906 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | G | 337 | Y | 2 | 20220210 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | G | 337 | L | 13 | 20240319 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | G | 337 | T | 3 | 20230217 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | G | 337 | Q | 2 | 20230415 |
| EPI_ISL_19714555 | NSP3 | hCoV-19/Russia/SPE-RII-MH220314S/2024 | G | 337 | D | 918 | 20241211 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | G | 337 | insHHYYQL | 1 | 20211210 |
| EPI_ISL_16010306 | NSP3 | hCoV-19/USA/VA-CDC-QDX43725381/2022 | G | 337 | R | 1 | 20221114 |
| EPI_ISL_17372391 | NSP3 | hCoV-19/India/TN-SPHL-2815/2023 | G | 337 | A | 18 | 20230311 |
| EPI_ISL_5273845 | NSP3 | hCoV-19/England/PHEC-3K040K18/2021 | A | 338 | N | 1 | 20210921 |
| EPI_ISL_18602693 | NSP3 | hCoV-19/Shanxi/JCCDC-JCCX0543/2023 | A | 338 | G | 11 | 20230925 |
| EPI_ISL_6702790 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689752_IZSM_COLLI_TIGEM/2021 | A | 338 | insYILstop | 1 | 20211018 |
| EPI_ISL_2375847 | NSP3 | hCoV-19/Brazil/RS-LMM54314/2021 | A | 338 | insE | 1 | 20210423 |
| EPI_ISL_19718572 | NSP3 | hCoV-19/New Zealand/25YA0395/2025 | A | 338 | T | 1556 | 20250129 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | A | 338 | insLQ | 6 | 20220906 |
| EPI_ISL_10943894 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8382/2022 | A | 338 | Q | 4 | 20220206 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | A | 338 | L | 11 | 20230415 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | A | 338 | B | 1 | 20210918 |
| EPI_ISL_9419394 | NSP3 | hCoV-19/India/AN-ICMR-NIV-INSACOG-GSEQ-8564/2022 | A | 338 | I | 3 | 20220110 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 338 | insdeldel | 1 | 20211006 |
| EPI_ISL_4109606 | NSP3 | hCoV-19/Italy/CAM-RD20702687115/2021 | A | 338 | stop | 2 | 20210825 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | A | 338 | del | 174 | 20231218 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | A | 338 | R | 1 | 20200729 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | A | 338 | insLTY | 1 | 20211005 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | A | 338 | Y | 1 | 20210628 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | A | 338 | F | 3 | 20230412 |
| EPI_ISL_18560660 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200650068N2/2023 | A | 338 | C | 101 | 20231117 |
| EPI_ISL_19623845 | NSP3 | hCoV-19/South Korea/KDCA296553/2024 | A | 338 | S | 62 | 20241119 |
| EPI_ISL_8812967 | NSP3 | hCoV-19/USA/OR-TRACE-POLK-042521-1190/2021 | A | 338 | insstop | 1 | 20210425 |
| EPI_ISL_14175646 | NSP3 | hCoV-19/India/WB-INSACOG-1931503224069/2022 | A | 338 | P | 5 | 20220704 |
| EPI_ISL_2375843 | NSP3 | hCoV-19/Brazil/RS-LMM54198/2021 | A | 338 | K | 1 | 20210419 |
| EPI_ISL_19806909 | NSP3 | hCoV-19/Spain/CL-UCHV-49808/2024 | A | 338 | D | 821 | 20241210 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | A | 338 | H | 4 | 20240319 |
| EPI_ISL_19803394 | NSP3 | hCoV-19/France/ARA-HCL025045266001/2025 | A | 338 | V | 2020 | 20250317 |
| EPI_ISL_19286405 | NSP3 | hCoV-19/USA/TX-HMH-M-141798/2024 | D | 339 | E | 258 | 20240628 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | D | 339 | S | 11 | 20220829 |
| EPI_ISL_8347921 | NSP3 | hCoV-19/Denmark/DCGC-293883/2021 | D | 339 | F | 1 | 20211227 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | D | 339 | L | 7 | 20231017 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | D | 339 | del | 165 | 20231218 |
| EPI_ISL_19473734 | NSP3 | hCoV-19/USA/CA-PFZ00169/2024 | D | 339 | G | 366 | 20240925 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | D | 339 | M | 1 | 20210806 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 339 | T | 4 | 20220210 |
| EPI_ISL_1544038 | NSP3 | hCoV-19/India/MH-NCCS-137236/2021 | D | 339 | insstopECLstop | 1 | 20210226 |
| EPI_ISL_18539261 | NSP3 | hCoV-19/South Korea/KDCA273565/2023 | D | 339 | A | 11 | 20231021 |
| EPI_ISL_19812671 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20773/2024 | D | 339 | H | 11 | 20241021 |
| EPI_ISL_12484908 | NSP3 | hCoV-19/USA/CA-CDPH-500056061/2022 | D | 339 | V | 14 | 20220328 |
| EPI_ISL_19181292 | NSP3 | hCoV-19/Singapore/R32MQ196/2024 | D | 339 | B | 13 | 20240528 |
| EPI_ISL_18560660 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200650068N2/2023 | D | 339 | stop | 100 | 20231117 |
| EPI_ISL_9787280 | NSP3 | hCoV-19/USA/KS-KSU-0304/2022 | D | 339 | K | 2 | 20220106 |
| EPI_ISL_2375843 | NSP3 | hCoV-19/Brazil/RS-LMM54198/2021 | D | 339 | Q | 1 | 20210419 |
| EPI_ISL_18443178 | NSP3 | hCoV-19/Bulgaria/605/2023 | D | 339 | insYYQLVY | 1 | 20230116 |
| EPI_ISL_8001186 | NSP3 | hCoV-19/France/BFC-HMN-21122040258/2021 | D | 339 | insSWN | 1 | 20211130 |
| EPI_ISL_19809863 | NSP3 | hCoV-19/USA/NY-PRL-250325_83B11/2025 | D | 339 | N | 925 | 20250319 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | D | 339 | R | 3 | 20240319 |
| EPI_ISL_18372429 | NSP3 | hCoV-19/Canada/ON-PHL-23-34204/2023 | D | 339 | Y | 83 | 20231002 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | P | 340 | insstop | 4 | 20211228 |
| EPI_ISL_19645533 | NSP3 | hCoV-19/Hubei/HCDC-YC7528/2024 | P | 340 | T | 351 | 20241203 |
| EPI_ISL_11887753 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0716/2021 | P | 340 | N | 3 | 20211229 |
| EPI_ISL_14311246 | NSP3 | hCoV-19/USA/TX-HMH-M-109555/2022 | P | 340 | insYILstopEF | 1 | 20220726 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | P | 340 | Q | 3 | 20220210 |
| EPI_ISL_1544038 | NSP3 | hCoV-19/India/MH-NCCS-137236/2021 | P | 340 | K | 2 | 20210226 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | P | 340 | E | 1 | 20230412 |
| EPI_ISL_9206956 | NSP3 | hCoV-19/Mexico/CMX-INMEGEN-52-248/2022 | P | 340 | insR | 6 | 20220112 |
| EPI_ISL_19067660 | NSP3 | hCoV-19/USA/NY-URMC-O4S1N418-1/2024 | P | 340 | H | 417 | 20240406 |
| EPI_ISL_2376027 | NSP3 | hCoV-19/Brazil/RS-LMM54090/2021 | P | 340 | V | 2 | 20210417 |
| EPI_ISL_16021099 | NSP3 | hCoV-19/USA/VA-CDC-LC0941182/2022 | P | 340 | R | 14 | 20221122 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | P | 340 | D | 1 | 20210722 |
| EPI_ISL_5324100 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324675_CAM_IZSM_COLLI_TIGEM/2021 | P | 340 | insCXF | 1 | 20210916 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | P | 340 | S | 12850 | 20250329 |
| EPI_ISL_18055129 | NSP3 | hCoV-19/USA/NV-SNPHL-772063/2023 | P | 340 | F | 8 | 20230717 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | P | 340 | G | 8 | 20220829 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | P | 340 | del | 162 | 20231218 |
| EPI_ISL_11987641 | NSP3 | hCoV-19/Denmark/DCGC-475275/2022 | P | 340 | Y | 1 | 20220404 |
| EPI_ISL_19821799 | NSP3 | hCoV-19/USA/NY-CDC-LC1136215/2025 | P | 340 | L | 11176 | 20250325 |
| EPI_ISL_15204301 | NSP3 | hCoV-19/Peru/CAJ-INS-28814/2022 | P | 340 | A | 8 | 20220901 |
| EPI_ISL_2375843 | NSP3 | hCoV-19/Brazil/RS-LMM54198/2021 | P | 340 | W | 1 | 20210419 |
| EPI_ISL_19337337 | NSP3 | hCoV-19/USA/UT-UPHL-240809860396/2024 | I | 341 | R | 47 | 20240723 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | I | 341 | D | 1 | 20211229 |
| EPI_ISL_10227786 | NSP3 | hCoV-19/USA/FL-BPHL-1687/2022 | I | 341 | insFGADPI | 1 | 20220129 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | I | 341 | Y | 64 | 20240319 |
| EPI_ISL_18661692 | NSP3 | hCoV-19/Germany/HB-RKI-I-1141790/2023 | I | 341 | L | 116 | 20231124 |
| EPI_ISL_16542552 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-122141/2022 | I | 341 | J | 6 | 20221230 |
| EPI_ISL_19186502 | NSP3 | hCoV-19/Ecuador/NIC-INSPI-0875-10639/2024 | I | 341 | K | 39 | 20240207 |
| EPI_ISL_19718004 | NSP3 | hCoV-19/Finland/THL-01104/2025 | I | 341 | M | 158 | 20250126 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | I | 341 | F | 4 | 20211005 |
| EPI_ISL_15293886 | NSP3 | hCoV-19/India/MH-NCCS-2748700729339/2021 | I | 341 | insILstop | 2 | 20211230 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | I | 341 | A | 2 | 20220210 |
| EPI_ISL_19826503 | NSP3 | hCoV-19/USA/NY-PRL-250408_81A04/2025 | I | 341 | T | 1877 | 20250403 |
| EPI_ISL_19825275 | NSP3 | hCoV-19/USA/NY-NYULH-22556/2025 | I | 341 | V | 664 | 20250407 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | I | 341 | H | 7 | 20220829 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | I | 341 | S | 1 | 20210622 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | I | 341 | stop | 5 | 20220906 |
| EPI_ISL_5236234 | NSP3 | hCoV-19/USA/MN-CDC-IBX435333824250/2021 | I | 341 | insTstopATSLA | 1 | 20210924 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | I | 341 | Q | 1 | 20211006 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | I | 341 | del | 100 | 20231218 |
| EPI_ISL_19823553 | NSP3 | hCoV-19/Croatia/HZJZ_8649/2025 | H | 342 | Q | 154 | 20250321 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | H | 342 | insD | 1 | 20211006 |
| EPI_ISL_5324100 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324675_CAM_IZSM_COLLI_TIGEM/2021 | H | 342 | G | 1 | 20210916 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | H | 342 | K | 3 | 20211005 |
| EPI_ISL_19134080 | NSP3 | hCoV-19/env/Germany/BY-LGL-6219906/2024 | H | 342 | F | 6 | 20240417 |
| EPI_ISL_15293886 | NSP3 | hCoV-19/India/MH-NCCS-2748700729339/2021 | H | 342 | E | 3 | 20211230 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | H | 342 | I | 3 | 20220906 |
| EPI_ISL_19348716 | NSP3 | hCoV-19/Senegal/IPD-2073/2024 | H | 342 | D | 53 | 20240604 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 342 | V | 1 | 20220210 |
| EPI_ISL_14311246 | NSP3 | hCoV-19/USA/TX-HMH-M-109555/2022 | H | 342 | stop | 6 | 20220726 |
| EPI_ISL_19302606 | NSP3 | hCoV-19/USA/MI-UM-10058436869/2024 | H | 342 | L | 39 | 20240703 |
| EPI_ISL_3299455 | NSP3 | hCoV-19/Sweden/UUH-000199828725N2/2021 | H | 342 | insXX | 1 | 20210428 |
| EPI_ISL_7241105 | NSP3 | hCoV-19/Slovenia/08-206557-MB/2021 | H | 342 | C | 4 | 20211103 |
| EPI_ISL_19826031 | NSP3 | hCoV-19/Singapore/Y25R15MSC84/2025 | H | 342 | Y | 13331 | 20250408 |
| EPI_ISL_5462934 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702444172/2021 | H | 342 | P | 6 | 20211005 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | H | 342 | T | 63 | 20240319 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | H | 342 | del | 98 | 20231218 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | H | 342 | A | 1 | 20230412 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | H | 342 | S | 4 | 20220210 |
| EPI_ISL_19512098 | NSP3 | hCoV-19/USA/NY-Wadsworth-24064341-01/2024 | H | 342 | N | 163 | 20241016 |
| EPI_ISL_19657271 | NSP3 | hCoV-19/USA/NY-CDC-LC1126953/2024 | H | 342 | R | 460 | 20241223 |
| EPI_ISL_16541979 | NSP3 | hCoV-19/Brazil/SP-FMRP-1455/2021 | H | 342 | insstopAT | 2 | 20210607 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | S | 343 | insstop | 1 | 20210622 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | S | 343 | R | 13 | 20220906 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | S | 343 | V | 2 | 20220210 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | S | 343 | G | 1 | 20211006 |
| EPI_ISL_18948478 | NSP3 | hCoV-19/South Korea/KDCA286129/2024 | S | 343 | T | 22 | 20240131 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 343 | K | 2 | 20220210 |
| EPI_ISL_11199076 | NSP3 | hCoV-19/England/QEUH-3A8DFED/2022 | S | 343 | Y | 11 | 20220312 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | S | 343 | L | 14 | 20220829 |
| EPI_ISL_18546965 | NSP3 | hCoV-19/USA/TX-HMH-M-134982/2023 | S | 343 | I | 11 | 20231017 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | S | 343 | del | 99 | 20231218 |
| EPI_ISL_17516969 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-1999/2023 | S | 343 | insF | 1 | 20230316 |
| EPI_ISL_18695781 | NSP3 | hCoV-19/Canada/ON-PHL-23-48796/2023 | S | 343 | A | 74 | 20231212 |
| EPI_ISL_14120949 | NSP3 | hCoV-19/Japan/PG-263936/2022 | S | 343 | N | 1 | 20220613 |
| EPI_ISL_19511055 | NSP3 | hCoV-19/USA/TN-SPHL-1529/2024 | S | 343 | C | 26 | 20240113 |
| EPI_ISL_18378994 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200490894N2/2022 | S | 343 | insXX | 1 | 20221115 |
| EPI_ISL_19134080 | NSP3 | hCoV-19/env/Germany/BY-LGL-6219906/2024 | S | 343 | F | 279 | 20240417 |
| EPI_ISL_9203311 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-73874/2022 | S | 343 | insstopEFVstopI | 5 | 20220103 |
| EPI_ISL_2375843 | NSP3 | hCoV-19/Brazil/RS-LMM54198/2021 | S | 343 | E | 6 | 20210419 |
| EPI_ISL_18773525 | NSP3 | hCoV-19/Brazil/RJ-LNN11842/2023 | S | 343 | P | 18 | 20231002 |
| EPI_ISL_2375847 | NSP3 | hCoV-19/Brazil/RS-LMM54314/2021 | S | 343 | D | 1 | 20210423 |
| EPI_ISL_1909249 | NSP3 | hCoV-19/Morocco/FMP-284/2021 | S | 343 | insstopL | 1 | 20210416 |
| EPI_ISL_17372576 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2641/2022 | S | 343 | Q | 1 | 20221229 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | S | 343 | H | 51 | 20230502 |
| EPI_ISL_4908489 | NSP3 | hCoV-19/Switzerland/ZH-ETHZ-34099344/2021 | S | 343 | insstopEFVstopILFAQ | 1 | 20210914 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | L | 344 | A | 11 | 20221210 |
| EPI_ISL_509417 | NSP3 | hCoV-19/Turkey/ACUTG-10/2020 | L | 344 | insGPM | 1 | 20200419 |
| EPI_ISL_16921653 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS_90689/2023 | L | 344 | J | 9 | 20230203 |
| EPI_ISL_18458570 | NSP3 | hCoV-19/Italy/APU-IZSPB-PT8248/2023 | L | 344 | V | 28 | 20231004 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | L | 344 | insFKSLC | 1 | 20210803 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | L | 344 | Y | 51 | 20230502 |
| EPI_ISL_18238277 | NSP3 | hCoV-19/Czech Republic/UMTM468026/2022 | L | 344 | insRVCVDTVRTXXXLLSAGIFGADPIHSL | 1 | 20220318 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | L | 344 | del | 91 | 20231218 |
| EPI_ISL_18859006 | NSP3 | hCoV-19/USA/NY-CDC-QDX91247781/2024 | L | 344 | F | 108 | 20240110 |
| EPI_ISL_13720110 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-111/2022 | L | 344 | T | 3 | 20220617 |
| EPI_ISL_19134080 | NSP3 | hCoV-19/env/Germany/BY-LGL-6219906/2024 | L | 344 | K | 11 | 20240417 |
| EPI_ISL_4908489 | NSP3 | hCoV-19/Switzerland/ZH-ETHZ-34099344/2021 | L | 344 | M | 1 | 20210914 |
| EPI_ISL_2375847 | NSP3 | hCoV-19/Brazil/RS-LMM54314/2021 | L | 344 | R | 3 | 20210423 |
| EPI_ISL_17514520 | NSP3 | hCoV-19/Sweden/03_SE600_000200495911N2/2022 | L | 344 | insXX | 1 | 20221124 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | L | 344 | insstopELC | 1 | 20210806 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | L | 344 | D | 1 | 20221126 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | L | 344 | insstopE | 1 | 20220703 |
| EPI_ISL_18212523 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS_98383/2023 | L | 344 | I | 13 | 20230821 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 344 | N | 1 | 20210318 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | L | 344 | insC | 2 | 20211005 |
| EPI_ISL_18936206 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00051/2023 | L | 344 | stop | 7 | 20230412 |
| EPI_ISL_17227458 | NSP3 | hCoV-19/USA/MD-IGS-142306500406A/2023 | L | 344 | S | 32 | 20230306 |
| EPI_ISL_17440325 | NSP3 | hCoV-19/Sweden/03_SE600_000200506444N2/2022 | R | 345 | insXXXX | 1 | 20221214 |
| EPI_ISL_12188157 | NSP3 | hCoV-19/Germany/NW-RKI-I-719108/2022 | R | 345 | N | 8 | 20220324 |
| EPI_ISL_19804041 | NSP3 | hCoV-19/USA/WI-WSLH-2500543/2025 | R | 345 | G | 629 | 20250120 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | R | 345 | V | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | R | 345 | D | 1 | 20210318 |
| EPI_ISL_19711268 | NSP3 | hCoV-19/USA/NE-RP250890/2025 | R | 345 | K | 1095 | 20250201 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | R | 345 | del | 91 | 20231218 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | R | 345 | L | 7 | 20230412 |
| EPI_ISL_15683340 | NSP3 | hCoV-19/Bulgaria/22BG-NC_022490_R36/2022 | R | 345 | T | 18 | 20221017 |
| EPI_ISL_19459291 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2023/2024 | R | 345 | E | 6 | 20240716 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | R | 345 | A | 5 | 20221126 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | R | 345 | insR | 1 | 20210918 |
| EPI_ISL_17365631 | NSP3 | hCoV-19/Sweden/03_SE600_500000283255SP/2023 | R | 345 | insXX | 3 | 20230102 |
| EPI_ISL_17226089 | NSP3 | hCoV-19/Sweden/03_SE600_000200547008N2/2023 | R | 345 | insXXXXXXXXXXX | 1 | 20230307 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | R | 345 | insS | 6 | 20220128 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | R | 345 | C | 1 | 20200729 |
| EPI_ISL_14311246 | NSP3 | hCoV-19/USA/TX-HMH-M-109555/2022 | R | 345 | F | 10 | 20220726 |
| EPI_ISL_17713127 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000209938SP/2022 | R | 345 | insXXXXX | 1 | 20220908 |
| EPI_ISL_13453785 | NSP3 | hCoV-19/USA/LA-OD-D-4314256613/2022 | R | 345 | Q | 2 | 20220615 |
| EPI_ISL_3372593 | NSP3 | hCoV-19/Peru/C03m32/2021 | R | 345 | H | 1 | 20210712 |
| EPI_ISL_15293886 | NSP3 | hCoV-19/India/MH-NCCS-2748700729339/2021 | R | 345 | stop | 11 | 20211230 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | R | 345 | Y | 55 | 20230502 |
| EPI_ISL_5801674 | NSP3 | hCoV-19/Brazil/SP-reBUT_353174606/2021 | R | 345 | insFVstop | 3 | 20210504 |
| EPI_ISL_3299514 | NSP3 | hCoV-19/Sweden/UUH-000199846222N2/2021 | R | 345 | insXXXVstop | 1 | 20210428 |
| EPI_ISL_19542152 | NSP3 | hCoV-19/Russia/PNZ-RII-MH206909S/2024 | R | 345 | I | 142 | 20240924 |
| EPI_ISL_19735943 | NSP3 | hCoV-19/France/BFC-RELAB-IPP01328/2025 | R | 345 | S | 142 | 20250114 |
| EPI_ISL_2843973 | NSP3 | hCoV-19/Brazil/SP-BT34114/2021 | V | 346 | insXXXX | 1 | 20210531 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | V | 346 | R | 5 | 20221231 |
| EPI_ISL_18139458 | NSP3 | hCoV-19/Egypt/CPHL-EGY23955/2023 | V | 346 | E | 6 | 20230318 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | V | 346 | S | 62 | 20221210 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | V | 346 | T | 4 | 20220906 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | V | 346 | K | 1 | 20211019 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | V | 346 | Q | 51 | 20230502 |
| EPI_ISL_19134080 | NSP3 | hCoV-19/env/Germany/BY-LGL-6219906/2024 | V | 346 | L | 42 | 20240417 |
| EPI_ISL_7508846 | NSP3 | hCoV-19/USA/CA-CSMC266/2021 | V | 346 | C | 1 | 20210224 |
| EPI_ISL_13720110 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-111/2022 | V | 346 | M | 5 | 20220617 |
| EPI_ISL_4932729 | NSP3 | hCoV-19/Germany/SN-RKI-I-266672/2021 | V | 346 | D | 4 | 20210922 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | V | 346 | W | 1 | 20211015 |
| EPI_ISL_19704603 | NSP3 | hCoV-19/Ireland/D-CS250026/2024 | V | 346 | F | 616 | 20241214 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 346 | del | 87 | 20231218 |
| EPI_ISL_19827105 | NSP3 | hCoV-19/Chile/VS-ISPC-26161/2025 | V | 346 | A | 211 | 20250326 |
| EPI_ISL_7507369 | NSP3 | hCoV-19/USA/CA-CSMC19/2021 | V | 346 | P | 2 | 20210630 |
| EPI_ISL_17021246 | NSP3 | hCoV-19/Chile/RM-199372/2021 | V | 346 | insP | 2 | 20211228 |
| EPI_ISL_18923215 | NSP3 | hCoV-19/USA/MS-MSPHL-0120/2024 | V | 346 | G | 8 | 20240206 |
| EPI_ISL_15082757 | NSP3 | hCoV-19/Japan/PG-353402/2022 | V | 346 | H | 8 | 20220829 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | V | 346 | Y | 4 | 20211005 |
| EPI_ISL_19761695 | NSP3 | hCoV-19/USA/NY-URMC-P3S1U157-1/2025 | V | 346 | I | 425 | 20250131 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 346 | insPATVSVS | 1 | 20230217 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | C | 347 | P | 3 | 20220210 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | C | 347 | stop | 3 | 20220703 |
| EPI_ISL_12771932 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726529656/2022 | C | 347 | G | 9 | 20220201 |
| EPI_ISL_7507369 | NSP3 | hCoV-19/USA/CA-CSMC19/2021 | C | 347 | T | 1 | 20210630 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | C | 347 | Q | 10 | 20230412 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | C | 347 | S | 11 | 20230217 |
| EPI_ISL_17275304 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45829/2023 | C | 347 | I | 1 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 347 | E | 1 | 20220210 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | C | 347 | N | 2 | 20210622 |
| EPI_ISL_9983365 | NSP3 | hCoV-19/Brazil/MG-LBI502/2021 | C | 347 | insXXXX | 1 | 20210318 |
| EPI_ISL_14866284 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-114176/2022 | C | 347 | insstop | 10 | 20220829 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | C | 347 | K | 2 | 20221231 |
| EPI_ISL_18345686 | NSP3 | hCoV-19/env/Ukraine/80015/2023 | C | 347 | L | 117 | 20230515 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | C | 347 | M | 3 | 20220906 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | C | 347 | del | 79 | 20231218 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | C | 347 | V | 13 | 20230217 |
| EPI_ISL_2375847 | NSP3 | hCoV-19/Brazil/RS-LMM54314/2021 | C | 347 | insDWSSD | 1 | 20210423 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | C | 347 | A | 13 | 20230217 |
| EPI_ISL_18139458 | NSP3 | hCoV-19/Egypt/CPHL-EGY23955/2023 | C | 347 | R | 8 | 20230318 |
| EPI_ISL_19765236 | NSP3 | hCoV-19/USA/NY-PRL-250225_81G11/2025 | C | 347 | F | 78 | 20250207 |
| EPI_ISL_12767447 | NSP3 | hCoV-19/USA/CA-Curative-371371/2022 | C | 347 | Y | 3 | 20220507 |
| EPI_ISL_19531470 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YMSYG/2024 | V | 348 | I | 285 | 20241010 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | V | 348 | Q | 2 | 20210918 |
| EPI_ISL_19419807 | NSP3 | hCoV-19/USA/NJ-CDC-LC1119589/2024 | V | 348 | L | 309 | 20240831 |
| EPI_ISL_8806488 | NSP3 | hCoV-19/India/MH-NCCS-2748700580210/2021 | V | 348 | insFLXXXXXXXXXXXXX | 1 | 20210826 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 348 | P | 4 | 20230217 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 348 | K | 4 | 20220210 |
| EPI_ISL_15293886 | NSP3 | hCoV-19/India/MH-NCCS-2748700729339/2021 | V | 348 | F | 6 | 20211230 |
| EPI_ISL_17715003 | NSP3 | hCoV-19/India/UP-MRU-ICMR-72/2023 | V | 348 | stop | 6 | 20230420 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | V | 348 | D | 2 | 20211019 |
| EPI_ISL_17275304 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45829/2023 | V | 348 | R | 9 | 20230217 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 348 | insstopstop | 1 | 20230108 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | V | 348 | insW | 1 | 20211229 |
| EPI_ISL_18345686 | NSP3 | hCoV-19/env/Ukraine/80015/2023 | V | 348 | M | 11 | 20230515 |
| EPI_ISL_7508846 | NSP3 | hCoV-19/USA/CA-CSMC266/2021 | V | 348 | Y | 1 | 20210224 |
| EPI_ISL_10560702 | NSP3 | hCoV-19/Australia/VIC5797/2020 | V | 348 | insILF | 1 | 20200721 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | V | 348 | C | 49 | 20211231 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | V | 348 | G | 6 | 20230217 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 348 | del | 80 | 20231218 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | V | 348 | T | 3 | 20221210 |
| EPI_ISL_13720110 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-111/2022 | V | 348 | S | 4 | 20220617 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | V | 348 | E | 7 | 20221126 |
| EPI_ISL_19763704 | NSP3 | hCoV-19/USA/RI-RISHL-2500347/2025 | V | 348 | A | 42 | 20250126 |
| EPI_ISL_19831766 | NSP3 | hCoV-19/Luxembourg/LNS1249326/2025 | D | 349 | N | 1411 | 20250227 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | D | 349 | Q | 1 | 20210622 |
| EPI_ISL_19565749 | NSP3 | hCoV-19/Sweden/AB-9521158776/2024 | D | 349 | E | 28 | 20241030 |
| EPI_ISL_9983261 | NSP3 | hCoV-19/Brazil/MG-LBI600/2021 | D | 349 | insXX | 1 | 20210218 |
| EPI_ISL_19593337 | NSP3 | hCoV-19/USA/CO-CDPHE-42452342/2024 | D | 349 | A | 404 | 20241118 |
| EPI_ISL_18889686 | NSP3 | hCoV-19/Slovakia/ruvztn-32478/2023 | D | 349 | Y | 439 | 20231221 |
| EPI_ISL_18345686 | NSP3 | hCoV-19/env/Ukraine/80015/2023 | D | 349 | K | 8 | 20230515 |
| EPI_ISL_18226346 | NSP3 | hCoV-19/env/India/MH-FMR_K4-53a/2023 | D | 349 | stop | 4 | 20230308 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | D | 349 | C | 10 | 20221210 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | D | 349 | T | 11 | 20230217 |
| EPI_ISL_18139458 | NSP3 | hCoV-19/Egypt/CPHL-EGY23955/2023 | D | 349 | H | 36 | 20230318 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | D | 349 | del | 80 | 20231218 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | D | 349 | V | 18 | 20221126 |
| EPI_ISL_18468742 | NSP3 | hCoV-19/Bulgaria/2734/2022 | D | 349 | I | 3 | 20221219 |
| EPI_ISL_9709923 | NSP3 | hCoV-19/Chile/RM-19146/2022 | D | 349 | R | 57 | 20220130 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | D | 349 | F | 54 | 20230502 |
| EPI_ISL_2375508 | NSP3 | hCoV-19/Brazil/RS-LMM53991/2021 | D | 349 | P | 1 | 20210417 |
| EPI_ISL_16333308 | NSP3 | hCoV-19/England/BRBR-3263CF4B/2022 | D | 349 | B | 13 | 20221219 |
| EPI_ISL_19823440 | NSP3 | hCoV-19/Japan/FR021-0246/2025 | D | 349 | G | 729 | 20250305 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | D | 349 | S | 14 | 20221231 |
| EPI_ISL_14866284 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-114176/2022 | D | 349 | L | 18 | 20220829 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | D | 349 | insY | 1 | 20200729 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | D | 349 | M | 1 | 20211229 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 350 | D | 4 | 20220210 |
| EPI_ISL_17275304 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45829/2023 | T | 350 | insKTLLSLRE | 1 | 20230217 |
| EPI_ISL_19826019 | NSP3 | hCoV-19/Singapore/Y25R15MSC24/2025 | T | 350 | I | 19291 | 20250404 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | T | 350 | H | 3 | 20221231 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | T | 350 | E | 1 | 20230412 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | T | 350 | del | 80 | 20231218 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | T | 350 | Q | 9 | 20221126 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | T | 350 | L | 62 | 20230502 |
| EPI_ISL_18345686 | NSP3 | hCoV-19/env/Ukraine/80015/2023 | T | 350 | insL | 2 | 20230515 |
| EPI_ISL_18633393 | NSP3 | hCoV-19/Australia/NSW-ICPMR-51847/2023 | T | 350 | V | 19 | 20231121 |
| EPI_ISL_8067477 | NSP3 | hCoV-19/England/BRBR-2F4782E/2021 | T | 350 | insF | 7 | 20211217 |
| EPI_ISL_19677244 | NSP3 | hCoV-19/Wales/CLIMB-CM7YK3KQ/2025 | T | 350 | A | 436 | 20250103 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 350 | insEETLVETPLTE | 1 | 20211006 |
| EPI_ISL_19816563 | NSP3 | hCoV-19/South Korea/KDCA297186/2025 | T | 350 | N | 1079 | 20250305 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | T | 350 | C | 7 | 20220128 |
| EPI_ISL_2375845 | NSP3 | hCoV-19/Brazil/RS-LMM54307/2021 | T | 350 | P | 5 | 20210423 |
| EPI_ISL_12934369 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1589/2022 | T | 350 | Y | 48 | 20220119 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | T | 350 | M | 1 | 20210722 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | T | 350 | R | 10 | 20230217 |
| EPI_ISL_18137121 | NSP3 | hCoV-19/Netherlands/GE-RIVM-130744/2023 | T | 350 | S | 54 | 20230623 |
| EPI_ISL_15043905 | NSP3 | hCoV-19/USA/NC-ECU-115029193/2022 | T | 350 | K | 10 | 20220906 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | T | 350 | W | 1 | 20200923 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | T | 350 | insCIRDSLKTLLSLRE | 1 | 20230217 |
| EPI_ISL_14866284 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-114176/2022 | T | 350 | F | 16 | 20220829 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | V | 351 | K | 5 | 20240804 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 351 | S | 15 | 20230108 |
| EPI_ISL_19146783 | NSP3 | hCoV-19/England/CLIMB-CM7YJROR/2024 | V | 351 | F | 79 | 20240503 |
| EPI_ISL_19384455 | NSP3 | hCoV-19/Gansu/PLCDC-0152/2024 | V | 351 | L | 49 | 20240828 |
| EPI_ISL_12934369 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1589/2022 | V | 351 | C | 52 | 20220119 |
| EPI_ISL_15363239 | NSP3 | hCoV-19/India/KA-SLS-SEQ-46185/2022 | V | 351 | Y | 1 | 20220903 |
| EPI_ISL_15292746 | NSP3 | hCoV-19/India/GA-NCCS-3055200227017/2021 | V | 351 | insstopILFA | 2 | 20211223 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 351 | del | 78 | 20231218 |
| EPI_ISL_5934793 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702444256_CAM_IZSM_COLLI_TIGEM/2021 | V | 351 | D | 11 | 20211014 |
| EPI_ISL_19662894 | NSP3 | hCoV-19/Singapore/R64MQ144/2024 | V | 351 | A | 336 | 20241126 |
| EPI_ISL_3079032 | NSP3 | hCoV-19/England/OXON-FA2933/2021 | V | 351 | insIS | 1 | 20210705 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | V | 351 | N | 4 | 20211228 |
| EPI_ISL_477221 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0019/2020 | V | 351 | insYK | 1 | 20200611 |
| EPI_ISL_4968055 | NSP3 | hCoV-19/Chile/LL-UACH-00237/2021 | V | 351 | T | 2 | 20210925 |
| EPI_ISL_14311246 | NSP3 | hCoV-19/USA/TX-HMH-M-109555/2022 | V | 351 | stop | 12 | 20220726 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | V | 351 | P | 2 | 20230401 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 351 | G | 15 | 20230412 |
| EPI_ISL_15293886 | NSP3 | hCoV-19/India/MH-NCCS-2748700729339/2021 | V | 351 | M | 7 | 20211230 |
| EPI_ISL_486673 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0099/2020 | V | 351 | insRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20200501 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | V | 351 | H | 2 | 20210730 |
| EPI_ISL_19799692 | NSP3 | hCoV-19/USA/TX-HMH-M-147625/2025 | V | 351 | I | 866 | 20250222 |
| EPI_ISL_8882775 | NSP3 | hCoV-19/India/MH-NCCS-2750000361416/2021 | V | 351 | R | 1 | 20210702 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | V | 351 | E | 2 | 20230217 |
| EPI_ISL_14366993 | NSP3 | hCoV-19/India/MH-NCCS-C265269/2022 | V | 351 | insA | 14 | 20220107 |
| EPI_ISL_11746445 | NSP3 | hCoV-19/India/KA-SLS-SEQ-24090/2022 | R | 352 | V | 1 | 20220117 |
| EPI_ISL_19787723 | NSP3 | hCoV-19/Spain/EX-BA_18682442/2025 | R | 352 | L | 558 | 20250317 |
| EPI_ISL_14036366 | NSP3 | hCoV-19/Chile/RM-85124/2022 | R | 352 | E | 13 | 20220708 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | R | 352 | del | 47 | 20231218 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | R | 352 | stop | 5 | 20221231 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | R | 352 | D | 2 | 20210722 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | R | 352 | N | 5 | 20230401 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | R | 352 | Q | 40 | 20240804 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | R | 352 | T | 11 | 20230217 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | R | 352 | F | 3 | 20220103 |
| EPI_ISL_19770381 | NSP3 | hCoV-19/Spain/AS-HUCA-232514718/2025 | R | 352 | S | 143 | 20250219 |
| EPI_ISL_9806776 | NSP3 | hCoV-19/env/USA/CA-SEARCH-66481/2022 | R | 352 | P | 4 | 20220105 |
| EPI_ISL_14986590 | NSP3 | hCoV-19/India/KA-SLS-40331/2022 | R | 352 | I | 6 | 20220725 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | R | 352 | A | 2 | 20220210 |
| EPI_ISL_19826031 | NSP3 | hCoV-19/Singapore/Y25R15MSC84/2025 | R | 352 | H | 3285 | 20250408 |
| EPI_ISL_18424321 | NSP3 | hCoV-19/Mexico/TAB_InDRE_FB4362/2023 | R | 352 | G | 20 | 20230906 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | R | 352 | K | 14 | 20230412 |
| EPI_ISL_19829173 | NSP3 | hCoV-19/USA/IL-CDC-LC1136452/2025 | R | 352 | C | 7664 | 20250402 |
| EPI_ISL_5388887 | NSP3 | hCoV-19/USA/IA-IVY-ZZX9LB09/2021 | R | 352 | insXXXXXXXXXXXLstop | 1 | 20210924 |
| EPI_ISL_4908489 | NSP3 | hCoV-19/Switzerland/ZH-ETHZ-34099344/2021 | R | 352 | insISM | 1 | 20210914 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | R | 352 | M | 8 | 20230108 |
| EPI_ISL_13720110 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-111/2022 | T | 353 | Q | 8 | 20220617 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | T | 353 | insI | 2 | 20230217 |
| EPI_ISL_19760537 | NSP3 | hCoV-19/Canada/AB-ABPHL-131222/2025 | T | 353 | A | 651 | 20250212 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | T | 353 | L | 11 | 20240307 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | T | 353 | Z | 1 | 20210918 |
| EPI_ISL_12934369 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1589/2022 | T | 353 | H | 50 | 20220119 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | T | 353 | insY | 2 | 20230217 |
| EPI_ISL_14986590 | NSP3 | hCoV-19/India/KA-SLS-40331/2022 | T | 353 | Y | 1 | 20220725 |
| EPI_ISL_19551230 | NSP3 | hCoV-19/Canada/ON-PHL-202420822/2024 | T | 353 | I | 2863 | 20241103 |
| EPI_ISL_18109166 | NSP3 | hCoV-19/India/WB-1931503422771/2023 | T | 353 | R | 46 | 20230412 |
| EPI_ISL_18923215 | NSP3 | hCoV-19/USA/MS-MSPHL-0120/2024 | T | 353 | S | 53 | 20240206 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 353 | insLYILstopEFVstopILFAQ | 1 | 20210801 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | T | 353 | C | 4 | 20240804 |
| EPI_ISL_14866284 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-114176/2022 | T | 353 | M | 37 | 20220829 |
| EPI_ISL_18468742 | NSP3 | hCoV-19/Bulgaria/2734/2022 | T | 353 | stop | 1 | 20221219 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | T | 353 | V | 11 | 20230217 |
| EPI_ISL_18982595 | NSP3 | hCoV-19/South Korea/KDCA287437/2024 | T | 353 | P | 35 | 20240218 |
| EPI_ISL_6675718 | NSP3 | hCoV-19/Chile/RM-175828/2021 | T | 353 | insXXX | 1 | 20211103 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | T | 353 | del | 44 | 20231218 |
| EPI_ISL_16541979 | NSP3 | hCoV-19/Brazil/SP-FMRP-1455/2021 | T | 353 | insXXXX | 1 | 20210607 |
| EPI_ISL_2858696 | NSP3 | hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a31d/2021 | T | 353 | insLY | 1 | 20210606 |
| EPI_ISL_12494719 | NSP3 | hCoV-19/India/KA-SLS-34182/2022 | T | 353 | J | 1 | 20220119 |
| EPI_ISL_19799720 | NSP3 | hCoV-19/USA/TX-HMH-M-147702/2025 | T | 353 | K | 672 | 20250301 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | T | 353 | E | 5 | 20230217 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | T | 353 | D | 1 | 20220112 |
| EPI_ISL_3905332 | NSP3 | hCoV-19/Chile/LR-UACH-00047/2021 | T | 353 | insLYILstopEFV | 1 | 20210802 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | T | 353 | N | 9 | 20230412 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | N | 354 | C | 7 | 20220128 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | N | 354 | Q | 3 | 20230401 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | N | 354 | R | 1 | 20210722 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | N | 354 | I | 110 | 20240804 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | N | 354 | insC | 1 | 20211005 |
| EPI_ISL_17981689 | NSP3 | hCoV-19/USA/AK-ANMC-0162/2023 | N | 354 | M | 4 | 20230608 |
| EPI_ISL_12084017 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-63/2021 | N | 354 | A | 1 | 20210122 |
| EPI_ISL_15293886 | NSP3 | hCoV-19/India/MH-NCCS-2748700729339/2021 | N | 354 | stop | 7 | 20211230 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | N | 354 | F | 2 | 20211006 |
| EPI_ISL_17723388 | NSP3 | hCoV-19/South Korea/KDCA237142/2023 | N | 354 | Y | 8 | 20230502 |
| EPI_ISL_19231892 | NSP3 | hCoV-19/Russia/SPE-RII-MH190801S/2024 | N | 354 | T | 160 | 20240601 |
| EPI_ISL_19464607 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55214/2024 | N | 354 | H | 160 | 20240922 |
| EPI_ISL_8966983 | NSP3 | hCoV-19/England/ALDP-32A1D3C/2022 | N | 354 | insHTR | 1 | 20220114 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | N | 354 | G | 11 | 20230217 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | N | 354 | L | 48 | 20230502 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | N | 354 | V | 2 | 20230412 |
| EPI_ISL_19755113 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC46254/2025 | N | 354 | D | 2818 | 20250206 |
| EPI_ISL_5368872 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-59828/2021 | N | 354 | insSTstopL | 3 | 20210830 |
| EPI_ISL_19831932 | NSP3 | hCoV-19/England/CLIMB-CM7YGUNB/2025 | N | 354 | S | 596 | 20250405 |
| EPI_ISL_16183009 | NSP3 | hCoV-19/India/WB-1931300715961/2022 | N | 354 | insK | 1 | 20220917 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | N | 354 | E | 42 | 20220210 |
| EPI_ISL_19695645 | NSP3 | hCoV-19/USA/MI-MDHHS-SC45699/2025 | N | 354 | B | 38 | 20250110 |
| EPI_ISL_19799641 | NSP3 | hCoV-19/USA/TX-HMH-M-147779/2025 | N | 354 | K | 196 | 20250315 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | N | 354 | insstopL | 2 | 20211015 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | N | 354 | del | 41 | 20231218 |
| EPI_ISL_10149318 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-345977/2022 | V | 355 | D | 519 | 20220210 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | V | 355 | N | 4 | 20240804 |
| EPI_ISL_19755521 | NSP3 | hCoV-19/USA/CO-CDPHE-43017729/2025 | V | 355 | A | 185 | 20250206 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 355 | del | 38 | 20231218 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | V | 355 | K | 3 | 20230401 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | V | 355 | W | 3 | 20210805 |
| EPI_ISL_19832082 | NSP3 | hCoV-19/env/Poland/WIHE-18/2024 | V | 355 | L | 84 | 20240813 |
| EPI_ISL_19701494 | NSP3 | hCoV-19/Norway/655/2025 | V | 355 | I | 1405 | 20250116 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | V | 355 | T | 45 | 20240307 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | V | 355 | M | 3 | 20220103 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 355 | G | 3 | 20230217 |
| EPI_ISL_1039520 | NSP3 | hCoV-19/Belgium/UZA-UA-CV0633974721/2021 | V | 355 | Q | 1 | 20210204 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | V | 355 | insLstopE | 1 | 20220112 |
| EPI_ISL_5800907 | NSP3 | hCoV-19/Brazil/SP-reBUT_352996018/2021 | V | 355 | insSstopLS | 1 | 20210422 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | V | 355 | insSTstopLS | 2 | 20220103 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | V | 355 | R | 2 | 20230217 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | V | 355 | Y | 41 | 20230502 |
| EPI_ISL_18731878 | NSP3 | hCoV-19/USA/IL-RIPHL_110651_G/2023 | V | 355 | S | 6 | 20231211 |
| EPI_ISL_13720110 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-111/2022 | V | 355 | E | 3 | 20220617 |
| EPI_ISL_18936178 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00154/2023 | V | 355 | F | 24 | 20230421 |
| EPI_ISL_19799641 | NSP3 | hCoV-19/USA/TX-HMH-M-147779/2025 | V | 355 | C | 162 | 20250315 |
| EPI_ISL_17530381 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13872/2023 | Y | 356 | stop | 41 | 20230318 |
| EPI_ISL_3636272 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ13948/2021 | Y | 356 | G | 1 | 20210806 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 356 | E | 1 | 20210318 |
| EPI_ISL_7507369 | NSP3 | hCoV-19/USA/CA-CSMC19/2021 | Y | 356 | R | 1 | 20210630 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | Y | 356 | K | 13 | 20240804 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | Y | 356 | V | 6 | 20240307 |
| EPI_ISL_18731878 | NSP3 | hCoV-19/USA/IL-RIPHL_110651_G/2023 | Y | 356 | T | 2 | 20231211 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | Y | 356 | Q | 2 | 20230401 |
| EPI_ISL_18469839 | NSP3 | hCoV-19/USA/CO-CDPHE-41420511/2023 | Y | 356 | C | 177 | 20231007 |
| EPI_ISL_5649614 | NSP3 | hCoV-19/Brazil/SP-IB_112429/2021 | Y | 356 | insstopLSL | 4 | 20210531 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | Y | 356 | F | 19 | 20230217 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | Y | 356 | del | 62 | 20231218 |
| EPI_ISL_16889485 | NSP3 | hCoV-19/Mexico/MEX_InDRE_S15910/2023 | Y | 356 | N | 10 | 20230110 |
| EPI_ISL_19497614 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS502067/2024 | Y | 356 | H | 649 | 20241011 |
| EPI_ISL_11932758 | NSP3 | hCoV-19/England/DHSC-CYBWDEZ/2022 | Y | 356 | insYLSL | 1 | 20220211 |
| EPI_ISL_8049922 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6887/2021 | Y | 356 | D | 1 | 20211010 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | Y | 356 | M | 1 | 20210622 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | Y | 356 | I | 42 | 20230502 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | Y | 356 | S | 11 | 20230217 |
| EPI_ISL_10824004 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-85611/2022 | Y | 356 | insILstopEFVstopILFAQMSTstopLSL | 5 | 20220125 |
| EPI_ISL_19799641 | NSP3 | hCoV-19/USA/TX-HMH-M-147779/2025 | Y | 356 | L | 190 | 20250315 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | Y | 356 | P | 1 | 20230412 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | L | 357 | P | 1 | 20211019 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | L | 357 | G | 3 | 20230412 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | L | 357 | K | 2 | 20230217 |
| EPI_ISL_18731878 | NSP3 | hCoV-19/USA/IL-RIPHL_110651_G/2023 | L | 357 | stop | 4 | 20231211 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | L | 357 | Y | 2 | 20221126 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 357 | Q | 7 | 20230108 |
| EPI_ISL_15293886 | NSP3 | hCoV-19/India/MH-NCCS-2748700729339/2021 | L | 357 | insI | 6 | 20211230 |
| EPI_ISL_19415281 | NSP3 | hCoV-19/Spain/AN-PMC-41340/2024 | L | 357 | F | 1020 | 20240703 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | L | 357 | insLstopEFVstopILFAQMSTS | 1 | 20210803 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | L | 357 | del | 53 | 20231218 |
| EPI_ISL_4551498 | NSP3 | hCoV-19/Denmark/DCGC-175295/2021 | L | 357 | J | 1 | 20210920 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | L | 357 | T | 3 | 20230217 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | L | 357 | insWCstopP | 3 | 20210805 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | L | 357 | C | 10 | 20230217 |
| EPI_ISL_18836671 | NSP3 | hCoV-19/Canada/ON-PHL-202403508/2024 | L | 357 | V | 91 | 20240117 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | L | 357 | S | 12 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 357 | N | 1 | 20220210 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | L | 357 | E | 4 | 20240804 |
| EPI_ISL_18920752 | NSP3 | hCoV-19/USA/NY-CDC-QDX92231989/2024 | L | 357 | I | 198 | 20240131 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | L | 357 | insRKSK | 1 | 20210622 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 357 | D | 2 | 20220210 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | A | 358 | M | 4 | 20240307 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | A | 358 | del | 54 | 20231218 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | A | 358 | R | 2 | 20230217 |
| EPI_ISL_19814894 | NSP3 | hCoV-19/Canada/AB-ABPHL-131491/2025 | A | 358 | V | 2618 | 20250309 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | A | 358 | I | 11 | 20230217 |
| EPI_ISL_19722475 | NSP3 | hCoV-19/Denmark/DCGC-691767/2025 | A | 358 | N | 320 | 20250120 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | A | 358 | L | 9 | 20230401 |
| EPI_ISL_18255160 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-15/2023 | A | 358 | stop | 40 | 20230502 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | A | 358 | insstopEFVstopILFAQMSTstop | 1 | 20210508 |
| EPI_ISL_17529135 | NSP3 | hCoV-19/India/DL-ILBS-9013/2023 | A | 358 | D | 42 | 20230330 |
| EPI_ISL_17127820 | NSP3 | hCoV-19/USA/PA-CDC-QDX46677930/2023 | A | 358 | P | 4 | 20230210 |
| EPI_ISL_11932758 | NSP3 | hCoV-19/England/DHSC-CYBWDEZ/2022 | A | 358 | K | 31 | 20220211 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | A | 358 | C | 8 | 20220128 |
| EPI_ISL_14274905 | NSP3 | hCoV-19/USA/CA-CDC-QDX39168666/2022 | A | 358 | G | 42 | 20220718 |
| EPI_ISL_9051043 | NSP3 | hCoV-19/USA/NY-SUNYQB-61210401601646/2021 | A | 358 | E | 3 | 20211216 |
| EPI_ISL_19799641 | NSP3 | hCoV-19/USA/TX-HMH-M-147779/2025 | A | 358 | S | 312 | 20250315 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | A | 358 | H | 1 | 20200807 |
| EPI_ISL_19821077 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11222/2025 | A | 358 | T | 2349 | 20250315 |
| EPI_ISL_17275364 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45890/2023 | A | 358 | Y | 4 | 20230217 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | A | 358 | Q | 5 | 20230217 |
| EPI_ISL_19336616 | NSP3 | hCoV-19/South Africa/WITS-DIH-097-C/2021 | A | 358 | insXXLIK | 1 | 20211201 |
| EPI_ISL_19039908 | NSP3 | hCoV-19/Japan/PG-569312/2023 | V | 359 | D | 50 | 20230901 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | V | 359 | N | 2 | 20221126 |
| EPI_ISL_2370880 | NSP3 | hCoV-19/Greece/196399/2021 | V | 359 | insXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20210501 |
| EPI_ISL_18740263 | NSP3 | hCoV-19/USA/CA-LACPHL-AY04493/2023 | V | 359 | A | 269 | 20231219 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | V | 359 | R | 1 | 20200701 |
| EPI_ISL_19779693 | NSP3 | hCoV-19/Wales/CLIMB-CM7Y8DW5/2025 | V | 359 | I | 849 | 20250222 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 359 | del | 56 | 20231218 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | V | 359 | insS | 1 | 20210809 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | V | 359 | P | 4 | 20240804 |
| EPI_ISL_13720110 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-111/2022 | V | 359 | Y | 1 | 20220617 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | V | 359 | insLstopstopKS | 1 | 20211231 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | V | 359 | C | 68 | 20230217 |
| EPI_ISL_17275364 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45890/2023 | V | 359 | T | 9 | 20230217 |
| EPI_ISL_7637654 | NSP3 | hCoV-19/Greece/311916/2021 | V | 359 | insXXX | 2 | 20211115 |
| EPI_ISL_19020988 | NSP3 | hCoV-19/USA/UT-UPHL-240318964917/2024 | V | 359 | F | 395 | 20240226 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | V | 359 | K | 3 | 20230522 |
| EPI_ISL_2376931 | NSP3 | hCoV-19/Greece/201421/2021 | V | 359 | insXXXXXXXXX | 1 | 20210509 |
| EPI_ISL_5232214 | NSP3 | hCoV-19/USA/FL-CDC-ASC210118183/2021 | V | 359 | insSGRstopstopEDTRRstopRGSV | 1 | 20210817 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | V | 359 | E | 31 | 20230220 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | V | 359 | M | 18 | 20230217 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | V | 359 | stop | 1 | 20200803 |
| EPI_ISL_9693205 | NSP3 | hCoV-19/India/MH-RFIP05625/2021 | V | 359 | insVSEGG | 1 | 20211020 |
| EPI_ISL_7507369 | NSP3 | hCoV-19/USA/CA-CSMC19/2021 | V | 359 | H | 1 | 20210630 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | V | 359 | Q | 2 | 20230401 |
| EPI_ISL_18733033 | NSP3 | hCoV-19/South Korea/KDCA279953/2023 | V | 359 | G | 8 | 20231211 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | V | 359 | L | 63 | 20240307 |
| EPI_ISL_18509858 | NSP3 | hCoV-19/env/Germany/BY-LGL-6026635/2023 | V | 359 | S | 16 | 20230828 |
| EPI_ISL_19646096 | NSP3 | hCoV-19/France/OCC-RELAB-HCL024193867501/2024 | F | 360 | L | 314 | 20241204 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | F | 360 | E | 1 | 20211019 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | F | 360 | D | 3 | 20230217 |
| EPI_ISL_19435649 | NSP3 | hCoV-19/Sweden/E-EGDT15A/2024 | F | 360 | S | 157 | 20240820 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | F | 360 | K | 7 | 20240804 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | F | 360 | Y | 6 | 20230217 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | F | 360 | H | 1 | 20230412 |
| EPI_ISL_3588754 | NSP3 | hCoV-19/USA/ID-IBL-746258/2021 | F | 360 | insL | 1 | 20210801 |
| EPI_ISL_18869864 | NSP3 | hCoV-19/Japan/PG-591276/2024 | F | 360 | C | 12 | 20240111 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | F | 360 | del | 62 | 20231218 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | F | 360 | Q | 4 | 20230522 |
| EPI_ISL_10943894 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8382/2022 | F | 360 | W | 5 | 20220206 |
| EPI_ISL_9051043 | NSP3 | hCoV-19/USA/NY-SUNYQB-61210401601646/2021 | F | 360 | P | 1 | 20211216 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | F | 360 | insstop | 2 | 20211110 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | F | 360 | I | 49 | 20230217 |
| EPI_ISL_18562917 | NSP3 | hCoV-19/USA/NM-NMDOH-2023042682/2023 | F | 360 | V | 16 | 20231021 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | F | 360 | A | 1 | 20211006 |
| EPI_ISL_4186293 | NSP3 | hCoV-19/USA/GA-CDC-ASC210156722/2021 | F | 360 | G | 1 | 20210715 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | F | 360 | stop | 7 | 20220128 |
| EPI_ISL_13871259 | NSP3 | hCoV-19/USA/ID-IBL-834098/2022 | F | 360 | M | 1 | 20220618 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | D | 361 | stop | 57 | 20220128 |
| EPI_ISL_4186293 | NSP3 | hCoV-19/USA/GA-CDC-ASC210156722/2021 | D | 361 | insLIKISM | 1 | 20210715 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | D | 361 | V | 41 | 20230220 |
| EPI_ISL_12999132 | NSP3 | hCoV-19/Chile/LR-62350/2022 | D | 361 | insDI | 8 | 20220516 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | D | 361 | insstopILFAQMSTstopLSLIKISM | 11 | 20230220 |
| EPI_ISL_19525916 | NSP3 | hCoV-19/USA/NY-URMC-P0S1R922-1/2024 | D | 361 | Y | 296 | 20241005 |
| EPI_ISL_7507369 | NSP3 | hCoV-19/USA/CA-CSMC19/2021 | D | 361 | R | 1 | 20210630 |
| EPI_ISL_19458975 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-18I-MM00010S/2024 | D | 361 | N | 257 | 20240918 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | D | 361 | Q | 1 | 20210812 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | D | 361 | del | 50 | 20231218 |
| EPI_ISL_8805676 | NSP3 | hCoV-19/India/MH-NCCS-2748700647201/2021 | D | 361 | insISI | 1 | 20211025 |
| EPI_ISL_9080022 | NSP3 | hCoV-19/France/IDF-HMN-22012140613/2022 | D | 361 | B | 1 | 20220114 |
| EPI_ISL_11932758 | NSP3 | hCoV-19/England/DHSC-CYBWDEZ/2022 | D | 361 | M | 26 | 20220211 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | D | 361 | F | 3 | 20210805 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | D | 361 | P | 1 | 20220112 |
| EPI_ISL_18509858 | NSP3 | hCoV-19/env/Germany/BY-LGL-6026635/2023 | D | 361 | I | 34 | 20230828 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | D | 361 | T | 3 | 20230401 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | D | 361 | L | 1 | 20230412 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | D | 361 | A | 243 | 20240307 |
| EPI_ISL_19429195 | NSP3 | hCoV-19/USA/NY-URMC-O9S1R044-1/2024 | D | 361 | E | 930 | 20240905 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | D | 361 | S | 9 | 20230217 |
| EPI_ISL_17550846 | NSP3 | hCoV-19/USA/TN-CDC-VSX-A079661/2023 | D | 361 | H | 8 | 20230414 |
| EPI_ISL_19762687 | NSP3 | hCoV-19/Chile/ML-ISPC-13828/2025 | D | 361 | G | 1257 | 20250211 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | D | 361 | K | 47 | 20230217 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | D | 361 | C | 5 | 20230522 |
| EPI_ISL_17585709 | NSP3 | hCoV-19/Egypt/ARMY-CU111/2022 | D | 361 | insISM | 36 | 20221220 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | D | 361 | insstop | 1 | 20210802 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | K | 362 | stop | 72 | 20220630 |
| EPI_ISL_19565094 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000579901/2024 | K | 362 | E | 90 | 20241022 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | K | 362 | insIXMT | 1 | 20210719 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | K | 362 | C | 1 | 20230412 |
| EPI_ISL_3299514 | NSP3 | hCoV-19/Sweden/UUH-000199846222N2/2021 | K | 362 | M | 1 | 20210428 |
| EPI_ISL_10548455 | NSP3 | hCoV-19/USA/TN-ASC-210579657/2022 | K | 362 | insKSLstopQTCF | 1 | 20220106 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 362 | Y | 1 | 20220210 |
| EPI_ISL_18877843 | NSP3 | hCoV-19/England/WSI-33194909/2023 | K | 362 | N | 78 | 20231227 |
| EPI_ISL_17275364 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45890/2023 | K | 362 | A | 2 | 20230217 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | K | 362 | T | 105 | 20230401 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | K | 362 | insstop | 1 | 20210806 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | K | 362 | V | 1 | 20211006 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 362 | L | 2 | 20220210 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | K | 362 | H | 1 | 20220112 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | K | 362 | I | 13 | 20240804 |
| EPI_ISL_16542913 | NSP3 | hCoV-19/USA/TX-HMH-M-122499/2023 | K | 362 | insISMT | 41 | 20230104 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | K | 362 | insLQ | 1 | 20210622 |
| EPI_ISL_19688510 | NSP3 | hCoV-19/Canada/AB-ABPHL-130618/2025 | K | 362 | R | 149 | 20250113 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | K | 362 | F | 2 | 20221126 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | K | 362 | Q | 7 | 20240307 |
| EPI_ISL_18424134 | NSP3 | hCoV-19/USA/TX-HMH-134570/2023 | K | 362 | del | 251 | 20230929 |
| EPI_ISL_3299514 | NSP3 | hCoV-19/Sweden/UUH-000199846222N2/2021 | K | 362 | insT | 1 | 20210428 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | K | 362 | S | 1 | 20210722 |
| EPI_ISL_19456918 | NSP3 | hCoV-19/Netherlands/UT-RIVM-142205/2024 | N | 363 | S | 683 | 20240921 |
| EPI_ISL_19469037 | NSP3 | hCoV-19/France/OCC-RELAB-HCL724000497201/2024 | N | 363 | D | 203 | 20240919 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | N | 363 | M | 4 | 20240307 |
| EPI_ISL_13720110 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-111/2022 | N | 363 | R | 5 | 20220617 |
| EPI_ISL_19596215 | NSP3 | hCoV-19/Wales/CLIMB-CM7YF3NI/2024 | N | 363 | H | 20 | 20241127 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | N | 363 | Q | 2 | 20230401 |
| EPI_ISL_18557703 | NSP3 | hCoV-19/England/CLIMB-CM7YKBHY/2023 | N | 363 | B | 15 | 20231031 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | N | 363 | G | 10 | 20221213 |
| EPI_ISL_19682865 | NSP3 | hCoV-19/USA/NM-NMDOH-038795/2024 | N | 363 | K | 300 | 20241126 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | N | 363 | Y | 33 | 20240804 |
| EPI_ISL_2637388 | NSP3 | hCoV-19/Italy/SAR-2794/2021 | N | 363 | A | 1 | 20210603 |
| EPI_ISL_19192463 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16031/2024 | N | 363 | I | 44 | 20240315 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | N | 363 | E | 2 | 20230217 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | N | 363 | insCLLSC | 1 | 20220112 |
| EPI_ISL_13871259 | NSP3 | hCoV-19/USA/ID-IBL-834098/2022 | N | 363 | stop | 1 | 20220618 |
| EPI_ISL_18424134 | NSP3 | hCoV-19/USA/TX-HMH-134570/2023 | N | 363 | del | 166 | 20230929 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | N | 363 | V | 4 | 20221126 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | N | 363 | C | 15 | 20220630 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | N | 363 | F | 1 | 20211019 |
| EPI_ISL_19696822 | NSP3 | hCoV-19/Turkey/HSGM-AA000487/2024 | N | 363 | T | 339 | 20240629 |
| EPI_ISL_468969 | NSP3 | hCoV-19/Spain/IB-IBV-2540/2020 | L | 364 | M | 1 | 20200328 |
| EPI_ISL_18648165 | NSP3 | hCoV-19/Spain/CL-45142/2023 | L | 364 | H | 37 | 20231116 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | L | 364 | A | 2 | 20231218 |
| EPI_ISL_9051043 | NSP3 | hCoV-19/USA/NY-SUNYQB-61210401601646/2021 | L | 364 | Y | 1 | 20211216 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | L | 364 | insCRYC | 1 | 20200807 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 364 | V | 26 | 20230410 |
| EPI_ISL_12084017 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-63/2021 | L | 364 | insMdel | 1 | 20210122 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | L | 364 | C | 12 | 20230401 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 364 | N | 1 | 20220210 |
| EPI_ISL_19303468 | NSP3 | hCoV-19/USA/TN-UM-L1837734463589/2024 | L | 364 | P | 123 | 20240529 |
| EPI_ISL_19773280 | NSP3 | hCoV-19/USA/NJ-CDC-LC1134159/2025 | L | 364 | I | 589 | 20250227 |
| EPI_ISL_19786185 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12577-P0/2025 | L | 364 | F | 9573 | 20250221 |
| EPI_ISL_19192463 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16031/2024 | L | 364 | S | 83 | 20240315 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | L | 364 | E | 9 | 20221213 |
| EPI_ISL_19523354 | NSP3 | hCoV-19/Croatia/HZJZ_8073/2024 | L | 364 | R | 254 | 20241007 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | L | 364 | G | 2 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 364 | D | 1 | 20210318 |
| EPI_ISL_18424134 | NSP3 | hCoV-19/USA/TX-HMH-134570/2023 | L | 364 | del | 38 | 20230929 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | L | 364 | K | 6 | 20240804 |
| EPI_ISL_17238811 | NSP3 | hCoV-19/Italy/CAM-90390374702_IZSM_COLLI_TIGEM/2023 | L | 364 | J | 8 | 20230218 |
| EPI_ISL_11606644 | NSP3 | hCoV-19/Wales/PHWC-PJEN87/2022 | Y | 365 | insM | 1 | 20220308 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | Y | 365 | insRYCS | 2 | 20210805 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | Y | 365 | R | 1 | 20230217 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | Y | 365 | L | 5 | 20221126 |
| EPI_ISL_19791152 | NSP3 | hCoV-19/Brazil/MS-FIOCRUZ-FMS760/2025 | Y | 365 | H | 405 | 20250217 |
| EPI_ISL_19224524 | NSP3 | hCoV-19/Cambodia/KVH240142/2024 | Y | 365 | F | 166 | 20240529 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | Y | 365 | T | 7 | 20240307 |
| EPI_ISL_16504887 | NSP3 | hCoV-19/Peru/MDD-INS-36777/2022 | Y | 365 | N | 6 | 20221212 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | Y | 365 | P | 2 | 20230217 |
| EPI_ISL_19192463 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16031/2024 | Y | 365 | M | 19 | 20240315 |
| EPI_ISL_18424134 | NSP3 | hCoV-19/USA/TX-HMH-134570/2023 | Y | 365 | del | 43 | 20230929 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | Y | 365 | D | 10 | 20221213 |
| EPI_ISL_17585707 | NSP3 | hCoV-19/Egypt/ARMY-CU109/2022 | Y | 365 | insLFQAFW | 1 | 20221218 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | Y | 365 | I | 1 | 20230401 |
| EPI_ISL_17585715 | NSP3 | hCoV-19/Egypt/ARMY-CU117/2022 | Y | 365 | stop | 23 | 20221006 |
| EPI_ISL_19623133 | NSP3 | hCoV-19/Canada/BC-BCCDC-755976/2024 | Y | 365 | C | 549 | 20241128 |
| EPI_ISL_12658803 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-111521-1267/2021 | Y | 365 | insAQMSTstopLSLIKISM | 1 | 20211115 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | Y | 365 | W | 5 | 20220203 |
| EPI_ISL_15554572 | NSP3 | hCoV-19/France/GES-HMN-22102130309/2022 | Y | 365 | insRSYLTPGDSSS | 1 | 20220729 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | Y | 365 | S | 44 | 20240804 |
| EPI_ISL_12694415 | NSP3 | hCoV-19/Russia/TVE-CRIE-7725396678/2022 | Y | 365 | K | 5 | 20220127 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | Y | 365 | E | 5 | 20230522 |
| EPI_ISL_19111421 | NSP3 | hCoV-19/Japan/PG-591126/2024 | D | 366 | G | 357 | 20240116 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | D | 366 | insHFIETI | 2 | 20230217 |
| EPI_ISL_18424134 | NSP3 | hCoV-19/USA/TX-HMH-134570/2023 | D | 366 | del | 45 | 20230929 |
| EPI_ISL_19192463 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16031/2024 | D | 366 | T | 29 | 20240315 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | D | 366 | F | 3 | 20230217 |
| EPI_ISL_19293355 | NSP3 | hCoV-19/Netherlands/UT-RIVM-139643/2024 | D | 366 | B | 17 | 20240704 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | D | 366 | I | 9 | 20221213 |
| EPI_ISL_19820861 | NSP3 | hCoV-19/USA/AZ-ASPHL-0192/2025 | D | 366 | E | 1724 | 20250324 |
| EPI_ISL_18915361 | NSP3 | hCoV-19/USA/CA-SLOPH-C2272/2024 | D | 366 | A | 66 | 20240203 |
| EPI_ISL_19027901 | NSP3 | hCoV-19/Colombia/ANT-LDSP5386/2024 | D | 366 | H | 20 | 20240208 |
| EPI_ISL_19298179 | NSP3 | hCoV-19/USA/FL-CDC-LC1110342/2024 | D | 366 | V | 14 | 20240718 |
| EPI_ISL_19736746 | NSP3 | hCoV-19/Canada/SK-RRPL-767018/2025 | D | 366 | Y | 67 | 20250121 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | D | 366 | Q | 133 | 20240804 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | D | 366 | P | 1 | 20210730 |
| EPI_ISL_10548455 | NSP3 | hCoV-19/USA/TN-ASC-210579657/2022 | D | 366 | W | 1 | 20220106 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | D | 366 | L | 1 | 20211006 |
| EPI_ISL_2919000 | NSP3 | hCoV-19/Brazil/RS-LMM58195/2021 | D | 366 | insKLVSSFLEMLAVFDKNLYD | 1 | 20210519 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | D | 366 | S | 8 | 20230522 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | D | 366 | K | 12 | 20240307 |
| EPI_ISL_10057479 | NSP3 | hCoV-19/USA/ID-IBL-789587/2022 | D | 366 | stop | 10 | 20220126 |
| EPI_ISL_19710378 | NSP3 | hCoV-19/Netherlands/GE-RIVM-145014/2025 | D | 366 | N | 489 | 20250115 |
| EPI_ISL_12084017 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-63/2021 | K | 367 | F | 1 | 20210122 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | K | 367 | insC | 1 | 20200923 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | K | 367 | P | 3 | 20230522 |
| EPI_ISL_15346935 | NSP3 | hCoV-19/Denmark/DCGC-592460/2022 | K | 367 | insCLG | 1 | 20221009 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | K | 367 | C | 1 | 20220630 |
| EPI_ISL_19677788 | NSP3 | hCoV-19/Argentina/INEI127280/2024 | K | 367 | R | 118 | 20241123 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | K | 367 | A | 128 | 20230220 |
| EPI_ISL_18651687 | NSP3 | hCoV-19/Japan/PG-577255/2023 | K | 367 | T | 21 | 20230914 |
| EPI_ISL_19298179 | NSP3 | hCoV-19/USA/FL-CDC-LC1110342/2024 | K | 367 | Q | 80 | 20240718 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | K | 367 | L | 6 | 20230217 |
| EPI_ISL_18424134 | NSP3 | hCoV-19/USA/TX-HMH-134570/2023 | K | 367 | del | 34 | 20230929 |
| EPI_ISL_17585707 | NSP3 | hCoV-19/Egypt/ARMY-CU109/2022 | K | 367 | stop | 5 | 20221218 |
| EPI_ISL_10548455 | NSP3 | hCoV-19/USA/TN-ASC-210579657/2022 | K | 367 | insstop | 1 | 20220106 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | K | 367 | V | 6 | 20240307 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | K | 367 | S | 9 | 20240804 |
| EPI_ISL_10723253 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_SZIEGNG7QC5M5JOA/2022 | K | 367 | I | 3 | 20220223 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | K | 367 | insMSTstopLSLIKIS | 2 | 20220630 |
| EPI_ISL_19810801 | NSP3 | hCoV-19/USA/NY-CUIMC-NP-18152/2024 | K | 367 | E | 271 | 20241004 |
| EPI_ISL_19132466 | NSP3 | hCoV-19/Japan/FR003-0074/2024 | K | 367 | N | 46 | 20240409 |
| EPI_ISL_10827572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88411/2022 | K | 367 | insMSTstopLSLIKISMTN | 7 | 20220201 |
| EPI_ISL_1714802 | NSP3 | hCoV-19/Bangladesh/BCSIR-JU-04/2020 | L | 368 | insSTstopLSLIKIS | 1 | 20201101 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | L | 368 | Q | 2 | 20230217 |
| EPI_ISL_19824727 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-031914/2025 | L | 368 | I | 578 | 20250327 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | L | 368 | E | 2 | 20230401 |
| EPI_ISL_18424134 | NSP3 | hCoV-19/USA/TX-HMH-134570/2023 | L | 368 | del | 37 | 20230929 |
| EPI_ISL_16031751 | NSP3 | hCoV-19/Finland/R-5480/2022 | L | 368 | H | 3 | 20220504 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | L | 368 | insstopstopNSR | 1 | 20220630 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | L | 368 | N | 4 | 20221126 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | L | 368 | insSM | 1 | 20220112 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | L | 368 | C | 22 | 20240804 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | L | 368 | M | 13 | 20221231 |
| EPI_ISL_18398184 | NSP3 | hCoV-19/England/CLIMB-CM7YFMR5/2023 | L | 368 | J | 3 | 20231007 |
| EPI_ISL_19802408 | NSP3 | hCoV-19/USA/CO-CDPHE-43210660/2025 | L | 368 | F | 937 | 20250315 |
| EPI_ISL_12999268 | NSP3 | hCoV-19/Russia/LIP-CRIE-7731255476/2022 | L | 368 | R | 5 | 20220217 |
| EPI_ISL_18908331 | NSP3 | hCoV-19/Czech Republic/NRL-s71/2024 | L | 368 | V | 3 | 20240102 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | L | 368 | insWKstopR | 118 | 20230220 |
| EPI_ISL_13700547 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-103092/2022 | L | 368 | insCFXAFWKstopR | 1 | 20220625 |
| EPI_ISL_13700547 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-103092/2022 | L | 368 | T | 4 | 20220625 |
| EPI_ISL_9402136 | NSP3 | hCoV-19/South Africa/NICD-N30315/2022 | L | 368 | S | 12 | 20220115 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | L | 368 | stop | 1 | 20230217 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | L | 368 | K | 6 | 20240307 |
| EPI_ISL_18647395 | NSP3 | hCoV-19/USA/IL-C23WGS3543/2023 | L | 368 | P | 3 | 20231128 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | V | 369 | P | 1 | 20210722 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | V | 369 | insR | 1 | 20221231 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | V | 369 | Q | 10 | 20230217 |
| EPI_ISL_19808706 | NSP3 | hCoV-19/Canada/ON-SHL-202501225/2025 | V | 369 | I | 701 | 20250315 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | V | 369 | S | 11 | 20230401 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | V | 369 | E | 1 | 20230522 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | V | 369 | K | 1 | 20211019 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | V | 369 | D | 6 | 20240804 |
| EPI_ISL_1714802 | NSP3 | hCoV-19/Bangladesh/BCSIR-JU-04/2020 | V | 369 | M | 2 | 20201101 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | V | 369 | T | 9 | 20240307 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 369 | del | 57 | 20231218 |
| EPI_ISL_10057479 | NSP3 | hCoV-19/USA/ID-IBL-789587/2022 | V | 369 | C | 4 | 20220126 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | V | 369 | L | 27 | 20230410 |
| EPI_ISL_14063336 | NSP3 | hCoV-19/Austria/LB-R00091-S090/2022 | V | 369 | G | 55 | 20220718 |
| EPI_ISL_15389071 | NSP3 | hCoV-19/Morocco/FMP438/2021 | V | 369 | insstopL | 1 | 20211223 |
| EPI_ISL_19192463 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16031/2024 | V | 369 | F | 148 | 20240315 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | V | 369 | N | 1 | 20200729 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | V | 369 | Y | 1 | 20230217 |
| EPI_ISL_19773073 | NSP3 | hCoV-19/USA/PA-CDC-LC1134214/2025 | V | 369 | A | 120 | 20250224 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | S | 370 | K | 174 | 20230220 |
| EPI_ISL_8230366 | NSP3 | hCoV-19/England/LSPA-2FC9842/2021 | S | 370 | insLLLFV | 3 | 20211220 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | S | 370 | Y | 2 | 20220210 |
| EPI_ISL_12084017 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-63/2021 | S | 370 | C | 1 | 20210122 |
| EPI_ISL_19829667 | NSP3 | hCoV-19/Italy/LOM_Sacco_Var_R61749/2025 | S | 370 | L | 95248 | 20250322 |
| EPI_ISL_19192463 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16031/2024 | S | 370 | Q | 48 | 20240315 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | S | 370 | H | 3 | 20240804 |
| EPI_ISL_10943877 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8870/2022 | S | 370 | D | 2 | 20220208 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | S | 370 | N | 5 | 20220630 |
| EPI_ISL_19242252 | NSP3 | hCoV-19/Yunnan/YNCDC-0902/2024 | S | 370 | A | 107 | 20240420 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | S | 370 | E | 2 | 20240315 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | S | 370 | F | 16 | 20240307 |
| EPI_ISL_19463505 | NSP3 | hCoV-19/USA/UT-UPHL-241004312554/2024 | S | 370 | T | 46 | 20240925 |
| EPI_ISL_19755566 | NSP3 | hCoV-19/USA/KY-KSPHL-0034226/2024 | S | 370 | P | 331 | 20241119 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 370 | G | 3 | 20230217 |
| EPI_ISL_10924495 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11804/2022 | S | 370 | insL | 25 | 20220228 |
| EPI_ISL_3452734 | NSP3 | hCoV-19/Maldives/MAV15143/2021 | S | 370 | V | 1 | 20210125 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | S | 370 | del | 82 | 20231218 |
| EPI_ISL_18735532 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC13726/2023 | S | 370 | stop | 27 | 20231222 |
| EPI_ISL_13563923 | NSP3 | hCoV-19/USA/ID-IBL-824101/2022 | S | 370 | insstopL | 6 | 20220531 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | S | 370 | R | 2 | 20221126 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | S | 370 | I | 1 | 20230522 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | S | 370 | W | 2 | 20211220 |
| EPI_ISL_15668420 | NSP3 | hCoV-19/Denmark/DCGC-606380/2022 | S | 371 | C | 11 | 20221031 |
| EPI_ISL_19795603 | NSP3 | hCoV-19/Canada/ON-PHL-202504516/2025 | S | 371 | G | 662 | 20250227 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | S | 371 | del | 97 | 20240319 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | S | 371 | V | 10 | 20240315 |
| EPI_ISL_16507154 | NSP3 | hCoV-19/env/Ukraine/73380/2022 | S | 371 | insMV | 1 | 20221114 |
| EPI_ISL_11737574 | NSP3 | hCoV-19/India/KA-SLS-SEQ-10163/2021 | S | 371 | J | 1 | 20211019 |
| EPI_ISL_13722328 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-114/2022 | S | 371 | P | 1 | 20220615 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | S | 371 | T | 26 | 20230217 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | S | 371 | H | 3 | 20230217 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | S | 371 | A | 67 | 20240320 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | S | 371 | Y | 3 | 20230522 |
| EPI_ISL_19817217 | NSP3 | hCoV-19/England/CLIMB-CM7Y8KDN/2025 | S | 371 | N | 396 | 20250319 |
| EPI_ISL_19641527 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09349/2024 | S | 371 | R | 329 | 20241207 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | S | 371 | K | 6 | 20230401 |
| EPI_ISL_4122697 | NSP3 | hCoV-19/England/PHEC-X308XC2F/2021 | S | 371 | stop | 2 | 20210824 |
| EPI_ISL_4513527 | NSP3 | hCoV-19/Zambia/ZMB-89076/2021 | S | 371 | Q | 1 | 20210213 |
| EPI_ISL_19318982 | NSP3 | hCoV-19/Canada/AB-ABPHL-120920/2024 | S | 371 | I | 123 | 20240722 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | S | 371 | E | 2 | 20220506 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | S | 371 | L | 18 | 20240804 |
| EPI_ISL_14381116 | NSP3 | hCoV-19/Germany/NW-RKI-I-919488/2022 | S | 371 | insFLEMKSEKQVEHKNLYDKLVSS | 2 | 20220711 |
| EPI_ISL_10943973 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8073/2022 | F | 372 | stop | 3 | 20220203 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | F | 372 | E | 2 | 20230401 |
| EPI_ISL_19530641 | NSP3 | hCoV-19/Canada/SK-RRPL-745709/2024 | F | 372 | L | 889 | 20241018 |
| EPI_ISL_19222964 | NSP3 | hCoV-19/USA/CA-CDPH-500137573/2024 | F | 372 | V | 65 | 20240517 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | F | 372 | A | 11 | 20221213 |
| EPI_ISL_18451040 | NSP3 | hCoV-19/Israel/ICH-741199626/2023 | F | 372 | I | 8 | 20231012 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | F | 372 | Q | 6 | 20240804 |
| EPI_ISL_18935403 | NSP3 | hCoV-19/Canada/BC-BCCDC-701169/2024 | F | 372 | Y | 14 | 20240213 |
| EPI_ISL_18346013 | NSP3 | hCoV-19/env/Ukraine/79993/2023 | F | 372 | M | 4 | 20230629 |
| EPI_ISL_18416782 | NSP3 | hCoV-19/Colombia/ANT-INS-VG-30828/2023 | F | 372 | C | 29 | 20230922 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | F | 372 | G | 1 | 20210313 |
| EPI_ISL_17585702 | NSP3 | hCoV-19/Egypt/ARMY-CU104/2022 | F | 372 | W | 1 | 20221213 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | F | 372 | K | 128 | 20230522 |
| EPI_ISL_5923087 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-20646/2021 | F | 372 | insWK | 2 | 20211002 |
| EPI_ISL_19824657 | NSP3 | hCoV-19/USA/MI-MDHHS-SC45772/2025 | F | 372 | S | 147 | 20250319 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | F | 372 | H | 27 | 20220506 |
| EPI_ISL_12309060 | NSP3 | hCoV-19/Russia/RYA-CRIE-S_7724081873/2022 | F | 372 | insWXXXXXSK | 3 | 20220126 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | F | 372 | N | 3 | 20230217 |
| EPI_ISL_19829580 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022705_01/2025 | F | 372 | del | 226 | 20250214 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | F | 372 | T | 4 | 20221126 |
| EPI_ISL_9679158 | NSP3 | hCoV-19/India/MH-RFIP07764/2022 | F | 372 | insFSNTCRLFNRKstopRVKSK | 1 | 20220103 |
| EPI_ISL_13871259 | NSP3 | hCoV-19/USA/ID-IBL-834098/2022 | F | 372 | insstopQTCFKL | 1 | 20220618 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | F | 372 | insWKstopRVKSK | 121 | 20230401 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | L | 373 | K | 9 | 20240804 |
| EPI_ISL_19633427 | NSP3 | hCoV-19/Slovakia/BA_24_00009599/2024 | L | 373 | W | 112 | 20241119 |
| EPI_ISL_16282441 | NSP3 | hCoV-19/Canary Islands/HUGCDN-01620027/2022 | L | 373 | R | 3 | 20221112 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 373 | I | 10 | 20230412 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | L | 373 | A | 2 | 20211019 |
| EPI_ISL_19816617 | NSP3 | hCoV-19/South Korea/KDCA297244/2025 | L | 373 | V | 101 | 20250307 |
| EPI_ISL_11293025 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-5/2022 | L | 373 | G | 7 | 20220211 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | L | 373 | N | 1 | 20220602 |
| EPI_ISL_19692547 | NSP3 | hCoV-19/USA/MN-MDH-45410/2025 | L | 373 | S | 194 | 20250107 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | L | 373 | Q | 8 | 20220630 |
| EPI_ISL_13722328 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-114/2022 | L | 373 | C | 4 | 20220615 |
| EPI_ISL_14716797 | NSP3 | hCoV-19/USA/OH-064723/2021 | L | 373 | stop | 2 | 20210929 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | L | 373 | T | 2 | 20240227 |
| EPI_ISL_19823411 | NSP3 | hCoV-19/Japan/FR021-0275/2025 | L | 373 | F | 1865 | 20250318 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | L | 373 | Y | 11 | 20230217 |
| EPI_ISL_14933505 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-SEQ17320/2022 | L | 373 | M | 35 | 20220727 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | L | 373 | D | 1 | 20221126 |
| EPI_ISL_19823335 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4014731/2025 | L | 373 | del | 341 | 20250310 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | E | 374 | insSHLstop | 1 | 20221217 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | E | 374 | T | 1 | 20210313 |
| EPI_ISL_16282441 | NSP3 | hCoV-19/Canary Islands/HUGCDN-01620027/2022 | E | 374 | F | 4 | 20221112 |
| EPI_ISL_19546540 | NSP3 | hCoV-19/Italy/LOM_Sacco_Var_R61347/2024 | E | 374 | V | 147 | 20241021 |
| EPI_ISL_19781967 | NSP3 | hCoV-19/USA/IL-RIPHL_123910_G/2025 | E | 374 | A | 201 | 20250217 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | E | 374 | Y | 1 | 20230401 |
| EPI_ISL_15293828 | NSP3 | hCoV-19/India/MH-NCCS-2512210324/2021 | E | 374 | insstopRVXXXX | 1 | 20211226 |
| EPI_ISL_12312233 | NSP3 | hCoV-19/England/LSPA-3DA8875/2022 | E | 374 | insINR | 2 | 20220421 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | E | 374 | Q | 11 | 20230522 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | E | 374 | C | 1 | 20230217 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | E | 374 | insEEstopKASstop | 1 | 20220128 |
| EPI_ISL_17500711 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13654/2023 | E | 374 | L | 8 | 20230321 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | E | 374 | I | 1 | 20211019 |
| EPI_ISL_19823335 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4014731/2025 | E | 374 | del | 344 | 20250310 |
| EPI_ISL_17948871 | NSP3 | hCoV-19/Philippines/PH-PGCMIN3235/2023 | E | 374 | stop | 48 | 20230519 |
| EPI_ISL_14391569 | NSP3 | hCoV-19/Denmark/DCGC-560919/2022 | E | 374 | Z | 10 | 20220805 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 374 | S | 8 | 20230420 |
| EPI_ISL_19498266 | NSP3 | hCoV-19/Brazil/BA-LACEN-293918134/2024 | E | 374 | G | 338 | 20240903 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | E | 374 | N | 256 | 20230401 |
| EPI_ISL_19814895 | NSP3 | hCoV-19/Canada/AB-ABPHL-131492/2025 | E | 374 | K | 873 | 20250313 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | E | 374 | R | 12 | 20240307 |
| EPI_ISL_19293070 | NSP3 | hCoV-19/Netherlands/NB-RIVM-139501/2024 | E | 374 | D | 198 | 20240705 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | E | 374 | M | 1 | 20240315 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | M | 375 | C | 1 | 20221126 |
| EPI_ISL_19803538 | NSP3 | hCoV-19/USA/WI-WSLH-2501046/2025 | M | 375 | R | 63 | 20250310 |
| EPI_ISL_19713522 | NSP3 | hCoV-19/Belgium/Sciensano-LS-S0973/2025 | M | 375 | I | 657 | 20250108 |
| EPI_ISL_19823335 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4014731/2025 | M | 375 | del | 357 | 20250310 |
| EPI_ISL_2899939 | NSP3 | hCoV-19/Italy/SIC-CQRC-21054169/2021 | M | 375 | insGRXXSKLNK | 1 | 20210612 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | M | 375 | F | 5 | 20220630 |
| EPI_ISL_19702028 | NSP3 | hCoV-19/Canada/ON-PHL-202502477/2025 | M | 375 | T | 735 | 20250119 |
| EPI_ISL_9051043 | NSP3 | hCoV-19/USA/NY-SUNYQB-61210401601646/2021 | M | 375 | E | 3 | 20211216 |
| EPI_ISL_19831296 | NSP3 | hCoV-19/Australia/WA16913/2025 | M | 375 | V | 580 | 20250327 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | M | 375 | Q | 1 | 20221229 |
| EPI_ISL_19756419 | NSP3 | hCoV-19/Russia/SPE-RII-MH222882S/2024 | M | 375 | L | 161 | 20241224 |
| EPI_ISL_19459298 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242827/2024 | M | 375 | stop | 86 | 20240712 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | M | 375 | insVIPTK | 1 | 20240227 |
| EPI_ISL_19365529 | NSP3 | hCoV-19/Spain/CU-81226/2024 | M | 375 | K | 274 | 20240628 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | M | 375 | W | 3 | 20230217 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | M | 375 | S | 6 | 20230522 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | M | 375 | D | 1 | 20230217 |
| EPI_ISL_11293025 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-5/2022 | M | 375 | H | 1 | 20220211 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | M | 375 | A | 4 | 20240804 |
| EPI_ISL_18744052 | NSP3 | hCoV-19/USA/ID-IBL-905639/2023 | M | 375 | N | 17 | 20231203 |
| EPI_ISL_13722328 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-114/2022 | K | 376 | Y | 2 | 20220615 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | K | 376 | I | 6 | 20240804 |
| EPI_ISL_19627388 | NSP3 | hCoV-19/Slovenia/1002489/2024 | K | 376 | N | 85 | 20241114 |
| EPI_ISL_9051043 | NSP3 | hCoV-19/USA/NY-SUNYQB-61210401601646/2021 | K | 376 | A | 1 | 20211216 |
| EPI_ISL_10491157 | NSP3 | hCoV-19/USA/TX-CDC-ASC210817338/2022 | K | 376 | insQYM | 1 | 20220215 |
| EPI_ISL_18424134 | NSP3 | hCoV-19/USA/TX-HMH-134570/2023 | K | 376 | F | 11 | 20230929 |
| EPI_ISL_19765171 | NSP3 | hCoV-19/USA/NY-PRL-250225_81E03/2025 | K | 376 | T | 125 | 20250210 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | K | 376 | L | 9 | 20240307 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | K | 376 | S | 10 | 20230401 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | K | 376 | G | 5 | 20220630 |
| EPI_ISL_16282440 | NSP3 | hCoV-19/Canary Islands/HUGCDN-03123179/2022 | K | 376 | stop | 4 | 20221103 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | K | 376 | V | 4 | 20221126 |
| EPI_ISL_18874598 | NSP3 | hCoV-19/USA/TX-HMH-M-138579/2024 | K | 376 | Q | 128 | 20240127 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | K | 376 | del | 130 | 20240319 |
| EPI_ISL_19696031 | NSP3 | hCoV-19/USA/MN-MDH-45591/2025 | K | 376 | E | 344 | 20250113 |
| EPI_ISL_14846540 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-137/2022 | K | 376 | insR | 1 | 20220427 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | K | 376 | insstop | 1 | 20200729 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | K | 376 | C | 1 | 20230522 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | K | 376 | P | 7 | 20230217 |
| EPI_ISL_19761290 | NSP3 | hCoV-19/Japan/TKYnat18346/2025 | K | 376 | M | 19 | 20250206 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | K | 376 | insASstop | 1 | 20211005 |
| EPI_ISL_17500711 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13654/2023 | K | 376 | insI | 2 | 20230321 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | K | 376 | H | 1 | 20230217 |
| EPI_ISL_19813547 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-50545/2024 | K | 376 | R | 550 | 20241231 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | S | 377 | W | 1 | 20221229 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | S | 377 | M | 10 | 20240307 |
| EPI_ISL_19685890 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12282-P0/2024 | S | 377 | I | 703 | 20241231 |
| EPI_ISL_19588658 | NSP3 | hCoV-19/Brazil/MG-FIOCRUZ-12345/2024 | S | 377 | N | 297 | 20241029 |
| EPI_ISL_18744052 | NSP3 | hCoV-19/USA/ID-IBL-905639/2023 | S | 377 | E | 12 | 20231203 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 377 | Y | 3 | 20230217 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | S | 377 | del | 143 | 20240319 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | S | 377 | Q | 2 | 20230401 |
| EPI_ISL_18424134 | NSP3 | hCoV-19/USA/TX-HMH-134570/2023 | S | 377 | D | 2 | 20230929 |
| EPI_ISL_19762609 | NSP3 | hCoV-19/Spain/VC-CVA_GRAL-126762/2025 | S | 377 | R | 650 | 20250107 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | S | 377 | A | 3 | 20240227 |
| EPI_ISL_18569000 | NSP3 | hCoV-19/France/ARA-HCL723001592101/2023 | S | 377 | V | 66 | 20231120 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | S | 377 | insLstopQTCFKLFGNE | 1 | 20200807 |
| EPI_ISL_19634121 | NSP3 | hCoV-19/Canada/AB-ABPHL-128987/2024 | S | 377 | T | 37 | 20241206 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | S | 377 | F | 1 | 20210817 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | S | 377 | K | 10 | 20240804 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | S | 377 | insDMER | 1 | 20220131 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | S | 377 | stop | 2 | 20220630 |
| EPI_ISL_19623953 | NSP3 | hCoV-19/Japan/FR302-1591/2024 | S | 377 | G | 190 | 20241111 |
| EPI_ISL_19622732 | NSP3 | hCoV-19/New Zealand/24YA7378/2024 | S | 377 | C | 30 | 20241103 |
| EPI_ISL_19143508 | NSP3 | hCoV-19/Pakistan/GRH42618/2024 | S | 377 | L | 3 | 20240325 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | E | 378 | insV | 1 | 20200701 |
| EPI_ISL_13563923 | NSP3 | hCoV-19/USA/ID-IBL-824101/2022 | E | 378 | T | 6 | 20220531 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 378 | I | 2 | 20220210 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 378 | insK | 1 | 20230108 |
| EPI_ISL_19784440 | NSP3 | hCoV-19/New Zealand/25YA0704/2025 | E | 378 | G | 515 | 20250306 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | E | 378 | N | 9 | 20221217 |
| EPI_ISL_17500711 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13654/2023 | E | 378 | M | 2 | 20230321 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | E | 378 | insstop | 1 | 20220630 |
| EPI_ISL_19138277 | NSP3 | hCoV-19/USA/VT-BSR-002059-WGS/2024 | E | 378 | A | 122 | 20240218 |
| EPI_ISL_19202066 | NSP3 | hCoV-19/Sweden/K-24-135898/2024 | E | 378 | V | 4034 | 20240520 |
| EPI_ISL_19783568 | NSP3 | hCoV-19/Spain/AS-HUCA-232519556/2025 | E | 378 | stop | 14 | 20250308 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | E | 378 | insEstop | 4 | 20220630 |
| EPI_ISL_4530197 | NSP3 | hCoV-19/England/PHEC-3G074G19/2021 | E | 378 | F | 1 | 20210919 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | E | 378 | del | 136 | 20240319 |
| EPI_ISL_19493829 | NSP3 | hCoV-19/England/CLIMB-CM7YGNQO/2024 | E | 378 | insLNKRSL | 1 | 20241002 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | E | 378 | insstopQTCFKLFGNEEstop | 1 | 20210805 |
| EPI_ISL_14378228 | NSP3 | hCoV-19/Germany/NW-RKI-I-916523/2022 | E | 378 | insKQVEQKIAEIPKEEVKNLXXXXXXXFLEMKSE | 2 | 20220711 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | E | 378 | Q | 20 | 20240315 |
| EPI_ISL_13995993 | NSP3 | hCoV-19/env/USA/CA-SEARCH-90653/2022 | E | 378 | Z | 5 | 20220501 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | E | 378 | L | 265 | 20230401 |
| EPI_ISL_19143508 | NSP3 | hCoV-19/Pakistan/GRH42618/2024 | E | 378 | S | 8 | 20240325 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | E | 378 | insLFQLLKstopKstop | 1 | 20200923 |
| EPI_ISL_4530201 | NSP3 | hCoV-19/England/PHEC-3G074G55/2021 | E | 378 | insL | 1 | 20210919 |
| EPI_ISL_19812728 | NSP3 | hCoV-19/Spain/MC-HCUVA-89191908/2025 | E | 378 | K | 259 | 20250305 |
| EPI_ISL_17198751 | NSP3 | hCoV-19/Japan/PG-457484/2023 | E | 378 | insRMG | 3 | 20230224 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | E | 378 | R | 1 | 20220602 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | E | 378 | P | 1 | 20230217 |
| EPI_ISL_18816937 | NSP3 | hCoV-19/USA/TX-HMH-M-137493/2024 | E | 378 | D | 173 | 20240105 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | E | 378 | C | 4 | 20240804 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | E | 378 | H | 1 | 20230522 |
| EPI_ISL_17616425 | NSP3 | hCoV-19/Ethiopia/CO_GX_200/2022 | K | 379 | A | 2 | 20220628 |
| EPI_ISL_7898710 | NSP3 | hCoV-19/Brazil/SP-IAL-6805/2021 | K | 379 | W | 1 | 20211124 |
| EPI_ISL_12694401 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471978/2022 | K | 379 | insLFQAFWKstop | 5 | 20220128 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | K | 379 | I | 5 | 20240307 |
| EPI_ISL_18809019 | NSP3 | hCoV-19/USA/AZ-CDC-QDX90947784/2024 | K | 379 | M | 111 | 20240102 |
| EPI_ISL_11906889 | NSP3 | hCoV-19/Pakistan/PACP-PB-PPHRL-21/2022 | K | 379 | V | 5 | 20220206 |
| EPI_ISL_19143508 | NSP3 | hCoV-19/Pakistan/GRH42618/2024 | K | 379 | H | 10 | 20240325 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | K | 379 | L | 10 | 20230522 |
| EPI_ISL_17052376 | NSP3 | hCoV-19/USA/TX-UTEP-B002526506/2022 | K | 379 | stop | 132 | 20220725 |
| EPI_ISL_1372029 | NSP3 | hCoV-19/India/ILSGS00211/2021 | K | 379 | P | 1 | 20210114 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | K | 379 | del | 154 | 20240319 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | K | 379 | G | 3 | 20240227 |
| EPI_ISL_19503455 | NSP3 | hCoV-19/USA/CA-CDPH-500142894/2024 | K | 379 | T | 768 | 20240909 |
| EPI_ISL_19808690 | NSP3 | hCoV-19/Canada/ON-SHL-202501053/2025 | K | 379 | N | 378 | 20250305 |
| EPI_ISL_19722059 | NSP3 | hCoV-19/USA/CA-PFZ03953/2025 | K | 379 | E | 212 | 20250121 |
| EPI_ISL_16908120 | NSP3 | hCoV-19/Austria/LB-R00124-S246/2023 | K | 379 | insERA | 1 | 20230208 |
| EPI_ISL_19716461 | NSP3 | hCoV-19/USA/PA-CDC-LC1129567/2025 | K | 379 | R | 532 | 20250116 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | K | 379 | C | 4 | 20230401 |
| EPI_ISL_19599104 | NSP3 | hCoV-19/USA/CA-CDPH-500144100/2024 | K | 379 | Q | 49 | 20241008 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | K | 379 | Y | 4 | 20240804 |
| EPI_ISL_17268849 | NSP3 | hCoV-19/Sweden/03_SE600_000200523831N2/2023 | K | 379 | S | 65 | 20230117 |
| EPI_ISL_19310110 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284241/2024 | Q | 380 | stop | 6 | 20240717 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | Q | 380 | D | 2 | 20230401 |
| EPI_ISL_19493829 | NSP3 | hCoV-19/England/CLIMB-CM7YGNQO/2024 | Q | 380 | F | 261 | 20241002 |
| EPI_ISL_11906889 | NSP3 | hCoV-19/Pakistan/PACP-PB-PPHRL-21/2022 | Q | 380 | C | 2 | 20220206 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Q | 380 | N | 10 | 20230410 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | Q | 380 | E | 16 | 20230217 |
| EPI_ISL_9051043 | NSP3 | hCoV-19/USA/NY-SUNYQB-61210401601646/2021 | Q | 380 | Y | 1 | 20211216 |
| EPI_ISL_19768162 | NSP3 | hCoV-19/France/NAQ-RELAB-HCL725000033501/2025 | Q | 380 | K | 42166 | 20250212 |
| EPI_ISL_14207274 | NSP3 | hCoV-19/USA/TX-KVI10388/2022 | Q | 380 | insEXX | 1 | 20220713 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Q | 380 | V | 1 | 20240315 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | Q | 380 | T | 5 | 20240227 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | Q | 380 | M | 4 | 20240804 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | Q | 380 | A | 15 | 20220630 |
| EPI_ISL_19491180 | NSP3 | hCoV-19/Spain/CL-COV49276/2024 | Q | 380 | P | 33 | 20241003 |
| EPI_ISL_19657277 | NSP3 | hCoV-19/USA/NJ-CDC-LC1127106/2024 | Q | 380 | del | 163 | 20241223 |
| EPI_ISL_19534196 | NSP3 | hCoV-19/USA/IL-RIPHL_22165_G/2024 | Q | 380 | L | 155 | 20240928 |
| EPI_ISL_19812025 | NSP3 | hCoV-19/USA/CO-CDPHE-43254741/2025 | Q | 380 | R | 1352 | 20250313 |
| EPI_ISL_19213385 | NSP3 | hCoV-19/Japan/FR011-0301/2024 | Q | 380 | H | 300 | 20240606 |
| EPI_ISL_18424134 | NSP3 | hCoV-19/USA/TX-HMH-134570/2023 | Q | 380 | S | 8 | 20230929 |
| EPI_ISL_14378219 | NSP3 | hCoV-19/Germany/NW-RKI-I-916513/2022 | Q | 380 | insVEHKNLXXXXXXXFLEMKSEKQ | 4 | 20220711 |
| EPI_ISL_13722328 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-114/2022 | Q | 380 | I | 2 | 20220615 |
| EPI_ISL_19443634 | NSP3 | hCoV-19/South Korea/KDCA295740/2024 | V | 381 | G | 24 | 20240830 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | V | 381 | Q | 1 | 20240315 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | V | 381 | T | 10 | 20240227 |
| EPI_ISL_19685887 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12278-P0/2024 | V | 381 | F | 729 | 20241230 |
| EPI_ISL_19814892 | NSP3 | hCoV-19/Canada/AB-ABPHL-131489/2025 | V | 381 | I | 1045 | 20250310 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 381 | E | 2 | 20220210 |
| EPI_ISL_7509645 | NSP3 | hCoV-19/USA/CA-CSMC523/2020 | V | 381 | insRFL | 1 | 20201116 |
| EPI_ISL_19218134 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004394892/2024 | V | 381 | A | 233 | 20240212 |
| EPI_ISL_19493829 | NSP3 | hCoV-19/England/CLIMB-CM7YGNQO/2024 | V | 381 | L | 357 | 20241002 |
| EPI_ISL_19657277 | NSP3 | hCoV-19/USA/NJ-CDC-LC1127106/2024 | V | 381 | del | 164 | 20241223 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | V | 381 | K | 3 | 20230522 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | V | 381 | N | 5 | 20240804 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | V | 381 | M | 4 | 20230217 |
| EPI_ISL_10681130 | NSP3 | hCoV-19/Italy/CAM-20220208459/2022 | V | 381 | Y | 4 | 20220219 |
| EPI_ISL_19143508 | NSP3 | hCoV-19/Pakistan/GRH42618/2024 | V | 381 | stop | 4 | 20240325 |
| EPI_ISL_13422073 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2473/2022 | V | 381 | P | 1 | 20220607 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 381 | S | 17 | 20230217 |
| EPI_ISL_18245885 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-2221/2023 | V | 381 | D | 27 | 20230822 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 381 | H | 2 | 20231218 |
| EPI_ISL_17019421 | NSP3 | hCoV-19/USA/MO-CDC-LC1010924/2023 | V | 381 | insR | 1 | 20230207 |
| EPI_ISL_19387715 | NSP3 | hCoV-19/Italy/UMB-LAOP-161-3-04/2024 | E | 382 | V | 52 | 20240803 |
| EPI_ISL_17500711 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13654/2023 | E | 382 | F | 2 | 20230321 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | E | 382 | N | 81 | 20240804 |
| EPI_ISL_19646438 | NSP3 | hCoV-19/France/OCC-RELAB-HCL024197969201/2024 | E | 382 | A | 278 | 20241213 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | E | 382 | W | 3 | 20221231 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | E | 382 | S | 10 | 20240307 |
| EPI_ISL_19443643 | NSP3 | hCoV-19/South Korea/KDCA295751/2024 | E | 382 | G | 308 | 20240902 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | E | 382 | Y | 5 | 20230410 |
| EPI_ISL_13563923 | NSP3 | hCoV-19/USA/ID-IBL-824101/2022 | E | 382 | Q | 13 | 20220531 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | E | 382 | C | 9 | 20211104 |
| EPI_ISL_18325840 | NSP3 | hCoV-19/England/CLIMB-CM7YROHT/2023 | E | 382 | Z | 10 | 20230920 |
| EPI_ISL_14378253 | NSP3 | hCoV-19/Germany/NW-RKI-I-916548/2022 | E | 382 | insXXXXXXXXXXXFLEMKSEKQVE | 1 | 20220711 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | E | 382 | R | 5 | 20230217 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | E | 382 | I | 4 | 20230217 |
| EPI_ISL_1714802 | NSP3 | hCoV-19/Bangladesh/BCSIR-JU-04/2020 | E | 382 | insSKL | 1 | 20201101 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | E | 382 | T | 4 | 20230217 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | E | 382 | del | 192 | 20250321 |
| EPI_ISL_19108567 | NSP3 | hCoV-19/England/CLIMB-CM7YFY88/2024 | E | 382 | D | 54 | 20240424 |
| EPI_ISL_19493829 | NSP3 | hCoV-19/England/CLIMB-CM7YGNQO/2024 | E | 382 | K | 1569 | 20241002 |
| EPI_ISL_19572787 | NSP3 | hCoV-19/Spain/AS-HUCA-232485203/2024 | E | 382 | stop | 26 | 20241115 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | E | 382 | L | 5 | 20230401 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | Q | 383 | T | 23 | 20240804 |
| EPI_ISL_496685 | NSP3 | hCoV-19/Panama/331516/2020 | Q | 383 | Z | 1 | 20200321 |
| EPI_ISL_19660185 | NSP3 | hCoV-19/Italy/FVG-TS-65331817/2024 | Q | 383 | L | 114 | 20241227 |
| EPI_ISL_19732923 | NSP3 | hCoV-19/Canada/ON-PHL-202503716/2025 | Q | 383 | K | 656 | 20250206 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | Q | 383 | F | 9 | 20211104 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | Q | 383 | V | 2 | 20231218 |
| EPI_ISL_19404921 | NSP3 | hCoV-19/USA/FL-GBW-GKISBBBD32280/2024 | Q | 383 | H | 187 | 20240830 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Q | 383 | D | 5 | 20230410 |
| EPI_ISL_19659436 | NSP3 | hCoV-19/England/CLIMB-CM7Y8KGM/2024 | Q | 383 | R | 486 | 20241221 |
| EPI_ISL_18886533 | NSP3 | hCoV-19/Ireland/D-SVUH-FAX82114-067/2024 | Q | 383 | P | 31 | 20240130 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | Q | 383 | C | 1 | 20200701 |
| EPI_ISL_13563923 | NSP3 | hCoV-19/USA/ID-IBL-824101/2022 | Q | 383 | insFGNEEstopKASstopT | 1 | 20220531 |
| EPI_ISL_14253458 | NSP3 | hCoV-19/USA/ID-IBL-838514/2022 | Q | 383 | S | 12 | 20220720 |
| EPI_ISL_15125260 | NSP3 | hCoV-19/USA/WA-UW-22090555260/2022 | Q | 383 | stop | 12 | 20220905 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | Q | 383 | del | 239 | 20250321 |
| EPI_ISL_11023737 | NSP3 | hCoV-19/Turkey/HSGM-G2215/2022 | Q | 383 | N | 4 | 20220217 |
| EPI_ISL_18447660 | NSP3 | hCoV-19/Ecuador/USFQ-4882/2023 | Q | 383 | A | 3 | 20230522 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | Q | 383 | M | 1 | 20240227 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Q | 383 | E | 16 | 20240315 |
| EPI_ISL_19727653 | NSP3 | hCoV-19/USA/IL-RIPHL_15263_G/2025 | K | 384 | Q | 81 | 20250128 |
| EPI_ISL_10681130 | NSP3 | hCoV-19/Italy/CAM-20220208459/2022 | K | 384 | stop | 4 | 20220219 |
| EPI_ISL_19609840 | NSP3 | hCoV-19/Canada/AB-ABPHL-127735/2024 | K | 384 | T | 132 | 20241114 |
| EPI_ISL_19803595 | NSP3 | hCoV-19/USA/WI-WSLH-2500802/2025 | K | 384 | E | 548 | 20250212 |
| EPI_ISL_19826030 | NSP3 | hCoV-19/Singapore/Y25R15MSC120/2025 | K | 384 | N | 22679 | 20250408 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | K | 384 | D | 3 | 20210803 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | K | 384 | L | 13 | 20240227 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | K | 384 | V | 1 | 20200701 |
| EPI_ISL_11293025 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-5/2022 | K | 384 | F | 1 | 20220211 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | K | 384 | del | 378 | 20250321 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | K | 384 | I | 5 | 20240804 |
| EPI_ISL_19831736 | NSP3 | hCoV-19/Luxembourg/LNS5753106/2025 | K | 384 | R | 1129 | 20250321 |
| EPI_ISL_17500711 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13654/2023 | K | 384 | A | 3 | 20230321 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | K | 384 | S | 4 | 20240315 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | K | 384 | insLFGNEEstopKASstopTN | 1 | 20211104 |
| EPI_ISL_14260185 | NSP3 | hCoV-19/France/GES-HMN-22072190091/2022 | K | 384 | insRGWPX | 1 | 20220711 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | K | 384 | C | 2 | 20230217 |
| EPI_ISL_19359336 | NSP3 | hCoV-19/USA/TN-SPHL-2376/2024 | K | 384 | M | 234 | 20240219 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 384 | P | 1 | 20220210 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | I | 385 | P | 1 | 20211006 |
| EPI_ISL_19826284 | NSP3 | hCoV-19/Canada/ON-HSC-202501553-v1/2025 | I | 385 | T | 2034 | 20250321 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | I | 385 | insYLHH | 2 | 20230104 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 385 | Q | 1 | 20220210 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 385 | D | 5 | 20230108 |
| EPI_ISL_10681130 | NSP3 | hCoV-19/Italy/CAM-20220208459/2022 | I | 385 | R | 6 | 20220219 |
| EPI_ISL_14243187 | NSP3 | hCoV-19/France/BFC-HMN-22072110385/2022 | I | 385 | C | 5 | 20220704 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | I | 385 | del | 272 | 20250321 |
| EPI_ISL_19300512 | NSP3 | hCoV-19/USA/NY-GBW-GKPLAAAA39203/2024 | I | 385 | F | 31 | 20240719 |
| EPI_ISL_509417 | NSP3 | hCoV-19/Turkey/ACUTG-10/2020 | I | 385 | insFGN | 1 | 20200419 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | I | 385 | A | 3 | 20240227 |
| EPI_ISL_19493829 | NSP3 | hCoV-19/England/CLIMB-CM7YGNQO/2024 | I | 385 | L | 903 | 20241002 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | I | 385 | insFG | 1 | 20210823 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | I | 385 | E | 3 | 20230401 |
| EPI_ISL_19563465 | NSP3 | hCoV-19/Netherlands/NH-RIVM-143949/2024 | I | 385 | M | 21 | 20241107 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | I | 385 | G | 2 | 20230217 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | I | 385 | K | 8 | 20240315 |
| EPI_ISL_2158562 | NSP3 | hCoV-19/USA/OR-OSPHL00390/2021 | I | 385 | insN | 1 | 20210419 |
| EPI_ISL_18836082 | NSP3 | hCoV-19/USA/IL-C24WGS44/2024 | I | 385 | N | 75 | 20240104 |
| EPI_ISL_17146175 | NSP3 | hCoV-19/USA/MN-CDC-LC1014321/2023 | I | 385 | J | 5 | 20230213 |
| EPI_ISL_19738563 | NSP3 | hCoV-19/Chile/NB-3631/2025 | I | 385 | S | 306 | 20250110 |
| EPI_ISL_6357248 | NSP3 | hCoV-19/Romania/33055/2021 | I | 385 | insF | 1 | 20210104 |
| EPI_ISL_19829196 | NSP3 | hCoV-19/USA/NY-CDC-LC1136617/2025 | I | 385 | V | 2485 | 20250403 |
| EPI_ISL_19190430 | NSP3 | hCoV-19/India/MH-ICMR-NIV-241510/2024 | A | 386 | L | 111 | 20240319 |
| EPI_ISL_19826623 | NSP3 | hCoV-19/USA/NY-PRL-250408_83B01/2025 | A | 386 | V | 3114 | 20250330 |
| EPI_ISL_19647820 | NSP3 | hCoV-19/Canada/ON-PHL-202426065/2024 | A | 386 | D | 168 | 20241222 |
| EPI_ISL_9415976 | NSP3 | hCoV-19/France/GES-HMN-22012100860/2022 | A | 386 | stop | 5 | 20220103 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | A | 386 | M | 1 | 20240315 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | A | 386 | insLHHY | 1 | 20240307 |
| EPI_ISL_19357104 | NSP3 | hCoV-19/Japan/TKYF240128/2024 | A | 386 | P | 10 | 20240731 |
| EPI_ISL_11215718 | NSP3 | hCoV-19/England/QEUH-3A88C81/2022 | A | 386 | E | 5 | 20220313 |
| EPI_ISL_17500711 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13654/2023 | A | 386 | W | 2 | 20230321 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 386 | insstop | 1 | 20230108 |
| EPI_ISL_14253458 | NSP3 | hCoV-19/USA/ID-IBL-838514/2022 | A | 386 | N | 10 | 20220720 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | A | 386 | insHLstopLKV | 1 | 20200805 |
| EPI_ISL_19772141 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10709/2025 | A | 386 | T | 8950 | 20250217 |
| EPI_ISL_18560117 | NSP3 | hCoV-19/France/LRE-ChuReu-723100492701/2023 | A | 386 | G | 13 | 20230929 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | A | 386 | insNGDS | 1 | 20210722 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | A | 386 | I | 13 | 20230217 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | A | 386 | del | 384 | 20250321 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | A | 386 | insLHHYY | 1 | 20221204 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 386 | R | 2 | 20230108 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | A | 386 | Y | 2 | 20240307 |
| EPI_ISL_19690695 | NSP3 | hCoV-19/Netherlands/OV-RIVM-144896/2025 | A | 386 | S | 1374 | 20250110 |
| EPI_ISL_17296308 | NSP3 | hCoV-19/Germany/BY-RKI-I-1124660/2023 | A | 386 | F | 12 | 20230315 |
| EPI_ISL_7758873 | NSP3 | hCoV-19/England/ALDP-2E22101/2021 | A | 386 | H | 3 | 20211209 |
| EPI_ISL_16526478 | NSP3 | hCoV-19/env/Ukraine/73371/2022 | A | 386 | insXX | 1 | 20221010 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | A | 386 | K | 9 | 20240227 |
| EPI_ISL_7758873 | NSP3 | hCoV-19/England/ALDP-2E22101/2021 | E | 387 | L | 2 | 20211209 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | E | 387 | I | 1 | 20230401 |
| EPI_ISL_13016991 | NSP3 | hCoV-19/France/BRE-HMN-22052100354/2022 | E | 387 | insDNQT | 1 | 20220419 |
| EPI_ISL_19466268 | NSP3 | hCoV-19/USA/NY-PRL-241001_82C07/2024 | E | 387 | V | 52 | 20240909 |
| EPI_ISL_19809874 | NSP3 | hCoV-19/USA/NY-PRL-250325_83C11/2025 | E | 387 | K | 547 | 20250319 |
| EPI_ISL_19493829 | NSP3 | hCoV-19/England/CLIMB-CM7YGNQO/2024 | E | 387 | H | 262 | 20241002 |
| EPI_ISL_19696822 | NSP3 | hCoV-19/Turkey/HSGM-AA000487/2024 | E | 387 | Q | 15 | 20240629 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | E | 387 | S | 6 | 20221231 |
| EPI_ISL_19768626 | NSP3 | hCoV-19/Taiwan/CDC-F94652/2025 | E | 387 | G | 788 | 20250224 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | E | 387 | P | 11 | 20231218 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | E | 387 | M | 8 | 20221217 |
| EPI_ISL_19190430 | NSP3 | hCoV-19/India/MH-ICMR-NIV-241510/2024 | E | 387 | R | 112 | 20240319 |
| EPI_ISL_17585716 | NSP3 | hCoV-19/Egypt/ARMY-CU118/2022 | E | 387 | F | 2 | 20221007 |
| EPI_ISL_19706561 | NSP3 | hCoV-19/Brazil/SE-FIOCRUZ-13497/2024 | E | 387 | D | 2271 | 20241206 |
| EPI_ISL_19357353 | NSP3 | hCoV-19/Germany/BE-D24-06250/2024 | E | 387 | N | 8 | 20240710 |
| EPI_ISL_5482145 | NSP3 | hCoV-19/England/PHEC-3M06BM51/2021 | E | 387 | stop | 5 | 20211021 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | E | 387 | del | 431 | 20250321 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | E | 387 | T | 4 | 20230217 |
| EPI_ISL_3311383 | NSP3 | hCoV-19/England/QEUH-1ACA041/2021 | E | 387 | Z | 2 | 20210803 |
| EPI_ISL_19726393 | NSP3 | hCoV-19/Germany/BY-USAFSAM-S23297/2024 | E | 387 | A | 1250 | 20241114 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | I | 388 | A | 1 | 20200701 |
| EPI_ISL_19828588 | NSP3 | hCoV-19/Sweden/25-DH-3946/2025 | I | 388 | N | 12 | 20250324 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | I | 388 | insVIKTLQPVS | 1 | 20200701 |
| EPI_ISL_19801159 | NSP3 | hCoV-19/USA/CA-SEARCH-142814/2024 | I | 388 | F | 231 | 20241201 |
| EPI_ISL_19493829 | NSP3 | hCoV-19/England/CLIMB-CM7YGNQO/2024 | I | 388 | L | 398 | 20241002 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | I | 388 | E | 1 | 20220210 |
| EPI_ISL_19744486 | NSP3 | hCoV-19/Austria/AGES-1100011/2025 | I | 388 | S | 210 | 20250106 |
| EPI_ISL_14253458 | NSP3 | hCoV-19/USA/ID-IBL-838514/2022 | I | 388 | D | 2 | 20220720 |
| EPI_ISL_9415976 | NSP3 | hCoV-19/France/GES-HMN-22012100860/2022 | I | 388 | insFXXXX | 1 | 20220103 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | I | 388 | C | 1 | 20230217 |
| EPI_ISL_19683640 | NSP3 | hCoV-19/Spain/CB-HUMV-5432864/2024 | I | 388 | V | 1079 | 20241227 |
| EPI_ISL_12694401 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471978/2022 | I | 388 | R | 5 | 20220128 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | I | 388 | del | 608 | 20250321 |
| EPI_ISL_19718632 | NSP3 | hCoV-19/USA/CO-CDPHE-42909473/2025 | I | 388 | M | 68 | 20250126 |
| EPI_ISL_19088290 | NSP3 | hCoV-19/USA/MA-CDC-LC1103551/2024 | I | 388 | J | 8 | 20240416 |
| EPI_ISL_11293025 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-5/2022 | I | 388 | Y | 1 | 20220211 |
| EPI_ISL_19812219 | NSP3 | hCoV-19/Sweden/AB-01_SE100_25CS500155/2025 | I | 388 | T | 6140 | 20250307 |
| EPI_ISL_7758873 | NSP3 | hCoV-19/England/ALDP-2E22101/2021 | I | 388 | stop | 6 | 20211209 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | I | 388 | insstop | 1 | 20220203 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | I | 388 | P | 1 | 20221231 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | I | 388 | K | 2 | 20230401 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | P | 389 | F | 1 | 20240315 |
| EPI_ISL_11573846 | NSP3 | hCoV-19/USA/MA-UMASSMED-202143448/2022 | P | 389 | A | 5 | 20220206 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | P | 389 | E | 1 | 20230217 |
| EPI_ISL_19756652 | NSP3 | hCoV-19/Japan/FR124-0084/2024 | P | 389 | T | 178 | 20240815 |
| EPI_ISL_19773596 | NSP3 | hCoV-19/USA/CA-CDPH-500145755/2025 | P | 389 | H | 2422 | 20250114 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | P | 389 | C | 1 | 20230401 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | P | 389 | R | 25 | 20240227 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | P | 389 | Q | 6 | 20230217 |
| EPI_ISL_19826015 | NSP3 | hCoV-19/Singapore/Y25R15MSC78/2025 | P | 389 | S | 5333 | 20250408 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | P | 389 | D | 3 | 20210812 |
| EPI_ISL_17585716 | NSP3 | hCoV-19/Egypt/ARMY-CU118/2022 | P | 389 | K | 1 | 20221007 |
| EPI_ISL_19493829 | NSP3 | hCoV-19/England/CLIMB-CM7YGNQO/2024 | P | 389 | stop | 264 | 20241002 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | P | 389 | del | 617 | 20250321 |
| EPI_ISL_19824737 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-032041/2025 | P | 389 | L | 4820 | 20250326 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | P | 389 | G | 5 | 20211014 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | P | 389 | V | 1 | 20210722 |
| EPI_ISL_16910205 | NSP3 | hCoV-19/Australia/VIC80930/2023 | P | 389 | N | 3 | 20230119 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 389 | I | 3 | 20220210 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | K | 390 | L | 271 | 20230401 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | K | 390 | A | 5 | 20230217 |
| EPI_ISL_19461887 | NSP3 | hCoV-19/USA/NY-URMC-O9S1R356-1/2024 | K | 390 | N | 145 | 20240918 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | K | 390 | S | 3 | 20240315 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | K | 390 | del | 625 | 20250321 |
| EPI_ISL_18139458 | NSP3 | hCoV-19/Egypt/CPHL-EGY23955/2023 | K | 390 | I | 89 | 20230318 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | K | 390 | V | 1 | 20211019 |
| EPI_ISL_19476859 | NSP3 | hCoV-19/Spain/AS-HUCA-232472236/2024 | K | 390 | T | 16 | 20240928 |
| EPI_ISL_18294956 | NSP3 | hCoV-19/Italy/UMB-LAOP-132-2-29-2023/2023 | K | 390 | Q | 24 | 20230915 |
| EPI_ISL_15185751 | NSP3 | hCoV-19/Malaysia/IMR_OS5097/2022 | K | 390 | insRGG | 1 | 20220505 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | K | 390 | Y | 1 | 20230401 |
| EPI_ISL_19283634 | NSP3 | hCoV-19/Slovenia/IMI-V1-8105/2024 | K | 390 | insXXX | 1 | 20240716 |
| EPI_ISL_13309929 | NSP3 | hCoV-19/USA/NJ-CDC-LC0682222/2022 | K | 390 | insQFE | 4 | 20220531 |
| EPI_ISL_19708022 | NSP3 | hCoV-19/USA/DE-DHSS-1019/2025 | K | 390 | R | 556 | 20250117 |
| EPI_ISL_19014027 | NSP3 | hCoV-19/Japan/6420947_S24/2023 | K | 390 | H | 3 | 20231201 |
| EPI_ISL_16887889 | NSP3 | hCoV-19/Australia/NSW-ICPMR-42092/2023 | K | 390 | insstop | 7 | 20230123 |
| EPI_ISL_17007400 | NSP3 | hCoV-19/England/QEUH-326D383C/2023 | K | 390 | insLstop | 2 | 20230214 |
| EPI_ISL_19300436 | NSP3 | hCoV-19/Spain/AN-PMC-41097/2024 | K | 390 | E | 115 | 20240606 |
| EPI_ISL_17180870 | NSP3 | hCoV-19/USA/TX-HMH-M-126247/2023 | K | 390 | stop | 6 | 20230226 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 390 | P | 1 | 20210318 |
| EPI_ISL_19195382 | NSP3 | hCoV-19/env/Germany/BY-LGL-6256151/2024 | E | 391 | stop | 9 | 20240527 |
| EPI_ISL_18986285 | NSP3 | hCoV-19/Turkey/HSGM-AA002050/2023 | E | 391 | Q | 156 | 20231207 |
| EPI_ISL_8615164 | NSP3 | hCoV-19/England/ALDP-3136368/2022 | E | 391 | insXXXXXstopL | 1 | 20220104 |
| EPI_ISL_18139458 | NSP3 | hCoV-19/Egypt/CPHL-EGY23955/2023 | E | 391 | Y | 2 | 20230318 |
| EPI_ISL_16467714 | NSP3 | hCoV-19/England/BRBR-3267E165/2022 | E | 391 | Z | 9 | 20221229 |
| EPI_ISL_17007400 | NSP3 | hCoV-19/England/QEUH-326D383C/2023 | E | 391 | L | 12 | 20230214 |
| EPI_ISL_5589579 | NSP3 | hCoV-19/USA/NC-ECU-106800990/2021 | E | 391 | N | 2 | 20210220 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | E | 391 | V | 25 | 20240227 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | E | 391 | insKLSYLstopL | 1 | 20220222 |
| EPI_ISL_19663636 | NSP3 | hCoV-19/Canada/ON-PHL-202500197/2024 | E | 391 | G | 588 | 20241231 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | E | 391 | M | 1 | 20230401 |
| EPI_ISL_1074448 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-20009/2021 | E | 391 | insKSSHLstopL | 1 | 20210102 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | E | 391 | del | 960 | 20250321 |
| EPI_ISL_19190430 | NSP3 | hCoV-19/India/MH-ICMR-NIV-241510/2024 | E | 391 | R | 187 | 20240319 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | E | 391 | S | 9 | 20240315 |
| EPI_ISL_12362903 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-13174/2022 | E | 391 | A | 2 | 20220317 |
| EPI_ISL_19829106 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136561/2025 | E | 391 | D | 2350 | 20250401 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | E | 391 | F | 1 | 20210313 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | E | 391 | insRstopDSstopRGSstopVHLstopL | 1 | 20210730 |
| EPI_ISL_8067192 | NSP3 | hCoV-19/England/ALDP-2F3DEDE/2021 | E | 391 | insXXXXXXL | 1 | 20211218 |
| EPI_ISL_19831543 | NSP3 | hCoV-19/Germany/NW-RKI-I-1148022/2025 | E | 391 | K | 1285 | 20250331 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 391 | P | 1 | 20220210 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | E | 392 | stop | 5 | 20211011 |
| EPI_ISL_19753103 | NSP3 | hCoV-19/Shanxi/SXJCCDC-JCCX029/2025 | E | 392 | G | 270 | 20250122 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | E | 392 | Y | 1 | 20210313 |
| EPI_ISL_19251066 | NSP3 | hCoV-19/USA/MI-UM-10058021953/2024 | E | 392 | D | 227 | 20240609 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 392 | Q | 1 | 20220210 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | E | 392 | del | 681 | 20250321 |
| EPI_ISL_5589579 | NSP3 | hCoV-19/USA/NC-ECU-106800990/2021 | E | 392 | L | 1 | 20210220 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 392 | I | 1 | 20220210 |
| EPI_ISL_18662532 | NSP3 | hCoV-19/USA/SD-SDPHL-3142/2023 | E | 392 | V | 40 | 20231208 |
| EPI_ISL_14233751 | NSP3 | hCoV-19/France/BRE-LBZCentre-CH2205020107/2022 | E | 392 | F | 6 | 20220502 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | E | 392 | S | 13 | 20230401 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | E | 392 | N | 14 | 20230217 |
| EPI_ISL_19440256 | NSP3 | hCoV-19/Japan/FR035-0441/2024 | E | 392 | A | 80 | 20240905 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | E | 392 | P | 1 | 20240227 |
| EPI_ISL_19822365 | NSP3 | hCoV-19/New Zealand/25YA0821/2025 | E | 392 | K | 2624 | 20250329 |
| EPI_ISL_11337487 | NSP3 | hCoV-19/England/NEWC-3B0D9E6/2022 | E | 392 | Z | 5 | 20220316 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | E | 392 | R | 6 | 20211203 |
| EPI_ISL_3299183 | NSP3 | hCoV-19/Sweden/UUH-000199065161/2021 | E | 392 | insXXHLstopLK | 1 | 20210415 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | V | 393 | del | 762 | 20250321 |
| EPI_ISL_19831284 | NSP3 | hCoV-19/Australia/WA16901/2025 | V | 393 | F | 3703 | 20250330 |
| EPI_ISL_19764033 | NSP3 | hCoV-19/Japan/FR015-0047/2025 | V | 393 | A | 217 | 20250212 |
| EPI_ISL_17425882 | NSP3 | hCoV-19/India/MH-CSIR-2911/2023 | V | 393 | N | 24 | 20230401 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | V | 393 | E | 1 | 20200805 |
| EPI_ISL_19826286 | NSP3 | hCoV-19/Canada/ON-HSC-202501556-v1/2025 | V | 393 | I | 3104 | 20250325 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | V | 393 | M | 2 | 20230217 |
| EPI_ISL_10924464 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11805/2022 | V | 393 | Q | 3 | 20220228 |
| EPI_ISL_19190430 | NSP3 | hCoV-19/India/MH-ICMR-NIV-241510/2024 | V | 393 | L | 216 | 20240319 |
| EPI_ISL_5589579 | NSP3 | hCoV-19/USA/NC-ECU-106800990/2021 | V | 393 | Y | 1 | 20210220 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | V | 393 | T | 2 | 20240227 |
| EPI_ISL_11695253 | NSP3 | hCoV-19/Indonesia/BT-NIHRD-MI_22_25851/2022 | V | 393 | G | 6 | 20220303 |
| EPI_ISL_19139764 | NSP3 | hCoV-19/Uganda/CVR-MS-0005/2023 | V | 393 | K | 4 | 20230623 |
| EPI_ISL_5274433 | NSP3 | hCoV-19/England/PHEC-3K048K01/2021 | V | 393 | S | 5 | 20210930 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 393 | D | 6 | 20230217 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | V | 393 | stop | 17 | 20230401 |
| EPI_ISL_18704871 | NSP3 | hCoV-19/Denmark/DCGC-668014/2023 | K | 394 | M | 21 | 20231211 |
| EPI_ISL_19796290 | NSP3 | hCoV-19/Australia/SA2469922/2025 | K | 394 | N | 1424 | 20250228 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | K | 394 | del | 654 | 20250321 |
| EPI_ISL_509417 | NSP3 | hCoV-19/Turkey/ACUTG-10/2020 | K | 394 | insDRstopDSstopRGSstopAIYNstop | 1 | 20200419 |
| EPI_ISL_14902729 | NSP3 | hCoV-19/USA/CA-HLX-STM-CBMTFRF4Y/2022 | K | 394 | insRRL | 1 | 20220822 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | K | 394 | L | 25 | 20230220 |
| EPI_ISL_19532413 | NSP3 | hCoV-19/USA/NY-NYULH-21303/2024 | K | 394 | R | 248 | 20241022 |
| EPI_ISL_19014027 | NSP3 | hCoV-19/Japan/6420947_S24/2023 | K | 394 | T | 33 | 20231201 |
| EPI_ISL_19659569 | NSP3 | hCoV-19/France/BFC-RELAB-IPP14847/2024 | K | 394 | E | 405 | 20241213 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | K | 394 | F | 2 | 20211220 |
| EPI_ISL_8543739 | NSP3 | hCoV-19/France/IDF-HMN-22012030675/2022 | K | 394 | stop | 4 | 20220103 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | K | 394 | insYNstopKstop | 1 | 20200923 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | K | 394 | D | 4 | 20240227 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | K | 394 | Q | 21 | 20230217 |
| EPI_ISL_19190430 | NSP3 | hCoV-19/India/MH-ICMR-NIV-241510/2024 | K | 394 | S | 169 | 20240319 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | K | 394 | A | 14 | 20230401 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | K | 394 | Y | 1 | 20211019 |
| EPI_ISL_18558453 | NSP3 | hCoV-19/Sweden/AC-460158072887/2023 | K | 394 | I | 1 | 20230716 |
| EPI_ISL_9697648 | NSP3 | hCoV-19/India/MH-RFIP08482/2022 | P | 395 | insNEG | 1 | 20220119 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | P | 395 | K | 5 | 20220210 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | P | 395 | N | 1 | 20240227 |
| EPI_ISL_10149347 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-346191/2022 | P | 395 | V | 2 | 20220210 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | P | 395 | I | 6 | 20230401 |
| EPI_ISL_19827274 | NSP3 | hCoV-19/Chile/CO-ISPC-23138/2025 | P | 395 | S | 3083 | 20250317 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | P | 395 | insXXXXXX | 1 | 20250107 |
| EPI_ISL_12516587 | NSP3 | hCoV-19/England/LSPA-3DC1A52/2022 | P | 395 | insNLstopLKVNL | 1 | 20220425 |
| EPI_ISL_19190430 | NSP3 | hCoV-19/India/MH-ICMR-NIV-241510/2024 | P | 395 | H | 156 | 20240319 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | P | 395 | A | 42 | 20231218 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | P | 395 | insstopRGSstop | 1 | 20211110 |
| EPI_ISL_10924464 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11805/2022 | P | 395 | insDW | 2 | 20220228 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | P | 395 | del | 410 | 20250321 |
| EPI_ISL_10924464 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11805/2022 | P | 395 | E | 2 | 20220228 |
| EPI_ISL_19344949 | NSP3 | hCoV-19/Sweden/T-23244115/2024 | P | 395 | Q | 115 | 20240809 |
| EPI_ISL_17563371 | NSP3 | hCoV-19/South Korea/KDCA230185/2023 | P | 395 | R | 15 | 20230405 |
| EPI_ISL_14253458 | NSP3 | hCoV-19/USA/ID-IBL-838514/2022 | P | 395 | insSstop | 1 | 20220720 |
| EPI_ISL_12524934 | NSP3 | hCoV-19/Germany/SN-RKI-I-771502/2022 | P | 395 | insDGE | 1 | 20220329 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | P | 395 | insSTQYE | 1 | 20230217 |
| EPI_ISL_19562850 | NSP3 | hCoV-19/Netherlands/OV-RIVM-143334/2024 | P | 395 | T | 168 | 20241008 |
| EPI_ISL_19826046 | NSP3 | hCoV-19/Singapore/Y25R15MSC66/2025 | P | 395 | L | 8755 | 20250407 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | P | 395 | stop | 2 | 20211005 |
| EPI_ISL_10753295 | NSP3 | hCoV-19/India/KA-SEQ_13888_S294_R1_001/2022 | P | 395 | insFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20220202 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | P | 395 | G | 5 | 20230217 |
| EPI_ISL_14676585 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-CM13695/2021 | F | 396 | insQLKVNLQ | 1 | 20210505 |
| EPI_ISL_7329300 | NSP3 | hCoV-19/USA/NC-ECU-110517120/2021 | F | 396 | insXXNLQ | 3 | 20211030 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | F | 396 | Y | 83 | 20240227 |
| EPI_ISL_17007400 | NSP3 | hCoV-19/England/QEUH-326D383C/2023 | F | 396 | stop | 7 | 20230214 |
| EPI_ISL_12694401 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471978/2022 | F | 396 | K | 5 | 20220128 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | F | 396 | A | 2 | 20211110 |
| EPI_ISL_15544162 | NSP3 | hCoV-19/France/BFC-HMN-22102130454/2022 | F | 396 | insKKWKYPQVNG | 1 | 20221010 |
| EPI_ISL_17521107 | NSP3 | hCoV-19/Ukraine/76752/2023 | F | 396 | insstopLKVNLstop | 5 | 20230313 |
| EPI_ISL_19706746 | NSP3 | hCoV-19/USA/NY-Wadsworth-25005736-01/2025 | F | 396 | S | 299 | 20250108 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | F | 396 | N | 2 | 20211019 |
| EPI_ISL_19636308 | NSP3 | hCoV-19/USA/FL-GBW-GKISBBBC45528/2024 | F | 396 | V | 224 | 20241218 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | F | 396 | M | 3 | 20230217 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | F | 396 | H | 1 | 20211203 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | F | 396 | T | 1 | 20211005 |
| EPI_ISL_5238566 | NSP3 | hCoV-19/USA/OH-CDC-LC0313467/2021 | F | 396 | insITESKPSVEQRKQDDKKIKACVEEVTTTLEEVKPF | 1 | 20210918 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | F | 396 | G | 10 | 20231218 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | F | 396 | del | 448 | 20250321 |
| EPI_ISL_11977686 | NSP3 | hCoV-19/Martinique/MTQ-ERFB-2068940257/2021 | F | 396 | insTLAT | 1 | 20210802 |
| EPI_ISL_16302049 | NSP3 | hCoV-19/Japan/TKYkbm64723/2022 | F | 396 | I | 336 | 20221128 |
| EPI_ISL_15292692 | NSP3 | hCoV-19/India/GA-NCCS-560646731/2021 | F | 396 | W | 1 | 20211102 |
| EPI_ISL_19283634 | NSP3 | hCoV-19/Slovenia/IMI-V1-8105/2024 | F | 396 | Q | 240 | 20240716 |
| EPI_ISL_17243392 | NSP3 | hCoV-19/Henan/XYCDC-19/2023 | F | 396 | insstopLKVNLQ | 84 | 20230225 |
| EPI_ISL_19750816 | NSP3 | hCoV-19/Japan/FR021-0145/2025 | F | 396 | L | 672 | 20250131 |
| EPI_ISL_17597587 | NSP3 | hCoV-19/Thailand/NIH-16-1333-0-02/2023 | F | 396 | C | 17 | 20230116 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | I | 397 | G | 1 | 20230217 |
| EPI_ISL_19833181 | NSP3 | hCoV-19/France/CVL-RELAB-IPP04114/2025 | I | 397 | T | 1664 | 20250325 |
| EPI_ISL_19316752 | NSP3 | hCoV-19/USA/NY-CDC-LC1110986/2024 | I | 397 | K | 10 | 20240718 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | I | 397 | insstopLKVNLQLN | 1 | 20211203 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | I | 397 | insstop | 2 | 20210730 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | I | 397 | del | 289 | 20250321 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | I | 397 | N | 31 | 20230401 |
| EPI_ISL_19788947 | NSP3 | hCoV-19/Brazil/BA-LACENBA-294232295/2025 | I | 397 | M | 201 | 20250210 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | I | 397 | L | 371 | 20250107 |
| EPI_ISL_17794017 | NSP3 | hCoV-19/Xinjiang/BTCDC118/2023 | I | 397 | insLKVNLQL | 4 | 20230316 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | I | 397 | F | 5 | 20230217 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | I | 397 | Y | 3 | 20230217 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | I | 397 | S | 5 | 20211220 |
| EPI_ISL_2225437 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-44199/2021 | I | 397 | insKVNLQL | 1 | 20210429 |
| EPI_ISL_17370802 | NSP3 | hCoV-19/Sweden/CMHH_03_SE600_500000204224SP/2022 | I | 397 | stop | 61 | 20221211 |
| EPI_ISL_10594332 | NSP3 | hCoV-19/France/BFC-HMN-22022070637/2022 | I | 397 | J | 4 | 20220131 |
| EPI_ISL_10924464 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11805/2022 | I | 397 | D | 2 | 20220228 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | I | 397 | insSstop | 1 | 20211005 |
| EPI_ISL_19805523 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U487-1/2025 | I | 397 | V | 974 | 20250225 |
| EPI_ISL_796648 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-11743/2020 | I | 397 | insstopLKVNLQL | 1 | 20200909 |
| EPI_ISL_16699932 | NSP3 | hCoV-19/Spain/AB-HGUA-41889125/2023 | I | 397 | R | 14 | 20230112 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | I | 397 | H | 1 | 20210812 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | I | 397 | Q | 6 | 20220506 |
| EPI_ISL_19729289 | NSP3 | hCoV-19/Japan/FR011-0053/2025 | T | 398 | A | 198 | 20250125 |
| EPI_ISL_5339759 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-50359/2021 | T | 398 | insM | 1 | 20210717 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | T | 398 | N | 816 | 20250107 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | T | 398 | K | 2 | 20220630 |
| EPI_ISL_18516916 | NSP3 | hCoV-19/Canada/BC-BCCDC-663691/2023 | T | 398 | P | 15 | 20231016 |
| EPI_ISL_13385272 | NSP3 | hCoV-19/France/GES-HMN-22052300136/2022 | T | 398 | insC | 1 | 20220516 |
| EPI_ISL_17370802 | NSP3 | hCoV-19/Sweden/CMHH_03_SE600_500000204224SP/2022 | T | 398 | L | 56 | 20221211 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | T | 398 | stop | 4 | 20230401 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | T | 398 | R | 27 | 20230220 |
| EPI_ISL_9451228 | NSP3 | hCoV-19/USA/NY-PRL-2022_0110_10A19/2022 | T | 398 | insRWG | 1 | 20220105 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | T | 398 | Y | 7 | 20230217 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 398 | Q | 1 | 20220210 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | T | 398 | insstop | 1 | 20210812 |
| EPI_ISL_15292692 | NSP3 | hCoV-19/India/GA-NCCS-560646731/2021 | T | 398 | E | 2 | 20211102 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | T | 398 | insKIstop | 1 | 20200715 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | T | 398 | F | 10 | 20231218 |
| EPI_ISL_19014027 | NSP3 | hCoV-19/Japan/6420947_S24/2023 | T | 398 | S | 11 | 20231201 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | T | 398 | del | 250 | 20250321 |
| EPI_ISL_10924464 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11805/2022 | T | 398 | D | 5 | 20220228 |
| EPI_ISL_19749663 | NSP3 | hCoV-19/USA/OH-CDC-QDX31328365/2025 | T | 398 | I | 1406 | 20250204 |
| EPI_ISL_19232967 | NSP3 | hCoV-19/Spain/IB-HUSE-09362/2024 | T | 398 | insGLX | 1 | 20240522 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | E | 399 | F | 1 | 20211019 |
| EPI_ISL_16241258 | NSP3 | hCoV-19/Japan/RIMD15196/2022 | E | 399 | insVNLQLNR | 4 | 20220725 |
| EPI_ISL_19827980 | NSP3 | hCoV-19/USA/CA-CDPH-500146146/2025 | E | 399 | A | 258 | 20250124 |
| EPI_ISL_12694401 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471978/2022 | E | 399 | H | 5 | 20220128 |
| EPI_ISL_8736805 | NSP3 | hCoV-19/England/BRBR-319964C/2022 | E | 399 | Z | 5 | 20220106 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | E | 399 | N | 8 | 20220630 |
| EPI_ISL_19333111 | NSP3 | hCoV-19/Nepal/NPHL-S-2661/2024 | E | 399 | G | 283 | 20240709 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | E | 399 | R | 349 | 20250107 |
| EPI_ISL_12694401 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471978/2022 | E | 399 | insLstop | 1 | 20220128 |
| EPI_ISL_15553755 | NSP3 | hCoV-19/France/BFC-HMN-22102030285/2022 | E | 399 | C | 1 | 20220926 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 399 | I | 1 | 20220210 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | E | 399 | T | 3 | 20240227 |
| EPI_ISL_17698170 | NSP3 | hCoV-19/Guangdong/GDCDC_ST_0124/2023 | E | 399 | V | 33 | 20230502 |
| EPI_ISL_15293859 | NSP3 | hCoV-19/India/GA-NCCS-4197/2021 | E | 399 | insVLQLNR | 2 | 20211227 |
| EPI_ISL_19632161 | NSP3 | hCoV-19/Canada/ON-PHL-202425074/2024 | E | 399 | L | 12 | 20241213 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | E | 399 | del | 247 | 20250321 |
| EPI_ISL_19032958 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6409/2024 | E | 399 | stop | 5 | 20240203 |
| EPI_ISL_12544556 | NSP3 | hCoV-19/Indonesia/BB-NIHRD-WGS.22.04424/2022 | E | 399 | Q | 2 | 20220403 |
| EPI_ISL_19822454 | NSP3 | hCoV-19/Australia/QLD0x015451/2025 | E | 399 | D | 137 | 20250320 |
| EPI_ISL_19819758 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YE4BC/2025 | E | 399 | K | 283 | 20250306 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | E | 399 | insYPGQGL | 1 | 20240227 |
| EPI_ISL_17370802 | NSP3 | hCoV-19/Sweden/CMHH_03_SE600_500000204224SP/2022 | S | 400 | V | 56 | 20221211 |
| EPI_ISL_13720118 | NSP3 | hCoV-19/USA/IL-S22WGS2757/2022 | S | 400 | L | 11 | 20220620 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | S | 400 | insDYQG | 1 | 20230217 |
| EPI_ISL_12694360 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467377/2022 | S | 400 | insstopL | 1 | 20220124 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | S | 400 | A | 12 | 20231218 |
| EPI_ISL_509417 | NSP3 | hCoV-19/Turkey/ACUTG-10/2020 | S | 400 | Q | 1 | 20200419 |
| EPI_ISL_18981192 | NSP3 | hCoV-19/USA/TX-HMH-M-139473/2024 | S | 400 | insXNLQLNRE | 1 | 20240212 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | S | 400 | E | 352 | 20250107 |
| EPI_ISL_18898596 | NSP3 | hCoV-19/Chile/ML-4277/2024 | S | 400 | C | 33 | 20240114 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | S | 400 | insCVstop | 1 | 20230217 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | S | 400 | del | 257 | 20250321 |
| EPI_ISL_13643353 | NSP3 | hCoV-19/USA/CA-CDPH-N3877252/2021 | S | 400 | insFGS | 1 | 20210927 |
| EPI_ISL_19780697 | NSP3 | hCoV-19/USA/LA-EVTL23529/2025 | S | 400 | T | 9 | 20250226 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | S | 400 | stop | 14 | 20230401 |
| EPI_ISL_19611503 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-03L-MM00027R/2024 | S | 400 | I | 258 | 20241203 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | S | 400 | insstopLstopL | 1 | 20220630 |
| EPI_ISL_19819704 | NSP3 | hCoV-19/Singapore/Y25R14MSC86/2025 | S | 400 | N | 511 | 20250402 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | S | 400 | R | 72 | 20250311 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | S | 400 | insstop | 1 | 20200807 |
| EPI_ISL_14752738 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-113398/2022 | S | 400 | insNLQLNRE | 3 | 20220823 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | S | 400 | D | 6 | 20230217 |
| EPI_ISL_19776555 | NSP3 | hCoV-19/Denmark/DCGC-691925/2025 | S | 400 | G | 1117 | 20250217 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 400 | K | 5 | 20230108 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 401 | S | 3 | 20230108 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | K | 401 | N | 437 | 20250107 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | K | 401 | G | 3 | 20240227 |
| EPI_ISL_11348095 | NSP3 | hCoV-19/Belarus/HM-CRIE-7735754979/2022 | K | 401 | stop | 7 | 20220104 |
| EPI_ISL_19799953 | NSP3 | hCoV-19/USA/TX-HMH-M-147357/2025 | K | 401 | L | 10 | 20250127 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | K | 401 | D | 9 | 20231218 |
| EPI_ISL_19637152 | NSP3 | hCoV-19/Liaoning/LNCDC-396-2/2024 | K | 401 | R | 325 | 20241212 |
| EPI_ISL_3917474 | NSP3 | hCoV-19/Netherlands/GL-RIVM-53259/2021 | K | 401 | V | 2 | 20210815 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | K | 401 | del | 200 | 20250321 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | K | 401 | insstop | 1 | 20220112 |
| EPI_ISL_19687946 | NSP3 | hCoV-19/Slovenia/IMI-V0-341/2025 | K | 401 | E | 1554 | 20250110 |
| EPI_ISL_15162760 | NSP3 | hCoV-19/India/MH-NCCS-590266654/2021 | K | 401 | insLQLNREN | 1 | 20211202 |
| EPI_ISL_7588420 | NSP3 | hCoV-19/Slovakia/36773/2021 | K | 401 | insHLQLNREN | 1 | 20211025 |
| EPI_ISL_18506359 | NSP3 | hCoV-19/Philippines/PH-VSMMC-7-217/2023 | K | 401 | T | 114 | 20230920 |
| EPI_ISL_19812847 | NSP3 | hCoV-19/USA/NE-RP252129/2025 | K | 401 | Q | 12 | 20250304 |
| EPI_ISL_18874346 | NSP3 | hCoV-19/USA/TX-HMH-M-138326/2024 | K | 401 | I | 13 | 20240123 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | K | 401 | A | 1 | 20211019 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | K | 401 | H | 2 | 20230413 |
| EPI_ISL_19828206 | NSP3 | hCoV-19/Australia/QLD0x0154A9/2025 | P | 402 | L | 6838 | 20250330 |
| EPI_ISL_18903005 | NSP3 | hCoV-19/Brazil/PE-FIOCRUZ-IAM16081/2023 | P | 402 | A | 28 | 20231228 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 402 | E | 1 | 20210318 |
| EPI_ISL_1415229 | NSP3 | hCoV-19/India/GJ-NCCS-VOC-498/2021 | P | 402 | insstopLNRENK | 1 | 20210206 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 402 | D | 1 | 20220210 |
| EPI_ISL_17036059 | NSP3 | hCoV-19/Luxembourg/LNS1081011/2023 | P | 402 | N | 1 | 20230206 |
| EPI_ISL_10924464 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11805/2022 | P | 402 | Q | 2 | 20220228 |
| EPI_ISL_4122697 | NSP3 | hCoV-19/England/PHEC-X308XC2F/2021 | P | 402 | insDSstopRGSstopAIYNstopKstopTF | 2 | 20210824 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | P | 402 | M | 2 | 20211203 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | P | 402 | insLEFGAT | 1 | 20230217 |
| EPI_ISL_17649970 | NSP3 | hCoV-19/Japan/KSH042/2022 | P | 402 | insXXXXXXXXXXXXXXXXXXX | 1 | 20221002 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | P | 402 | F | 6 | 20230401 |
| EPI_ISL_19828117 | NSP3 | hCoV-19/Australia/QLD0x0154B9/2025 | P | 402 | S | 8932 | 20250329 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | P | 402 | stop | 10 | 20220630 |
| EPI_ISL_19329132 | NSP3 | hCoV-19/USA/NY-NPHL-240806_83C08/2024 | P | 402 | T | 4103 | 20240801 |
| EPI_ISL_19718670 | NSP3 | hCoV-19/USA/CO-CDPHE-42909549/2025 | P | 402 | del | 215 | 20250127 |
| EPI_ISL_19505241 | NSP3 | hCoV-19/France/ARA-HCL024159689601/2024 | P | 402 | H | 1638 | 20241013 |
| EPI_ISL_19721812 | NSP3 | hCoV-19/USA/WI-WSLH-2500239/2025 | P | 402 | R | 709 | 20250101 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | P | 402 | V | 8 | 20220630 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | P | 402 | K | 365 | 20250107 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | P | 402 | Y | 1 | 20240227 |
| EPI_ISL_19302424 | NSP3 | hCoV-19/USA/TN-UM-L2127481225159/2024 | S | 403 | Y | 6 | 20240702 |
| EPI_ISL_3917474 | NSP3 | hCoV-19/Netherlands/GL-RIVM-53259/2021 | S | 403 | G | 2 | 20210815 |
| EPI_ISL_18870794 | NSP3 | hCoV-19/env/Germany/BY-LGL-6128243/2024 | S | 403 | stop | 9 | 20240117 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | S | 403 | insFQ | 1 | 20210802 |
| EPI_ISL_1136994 | NSP3 | hCoV-19/USA/DE-DHSS-B1060742/2020 | S | 403 | insRRXX | 1 | 20201202 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | S | 403 | M | 379 | 20250107 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | S | 403 | I | 12 | 20231218 |
| EPI_ISL_17616418 | NSP3 | hCoV-19/Ethiopia/CO_GX_115/2022 | S | 403 | K | 6 | 20220627 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 403 | D | 2 | 20210318 |
| EPI_ISL_19812416 | NSP3 | hCoV-19/Germany/BW-RKI-I-1147978/2025 | S | 403 | A | 98 | 20250303 |
| EPI_ISL_19760402 | NSP3 | hCoV-19/USA/NY-CDC-LC1133529/2025 | S | 403 | L | 122251 | 20250219 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 403 | N | 14 | 20230108 |
| EPI_ISL_19718670 | NSP3 | hCoV-19/USA/CO-CDPHE-42909549/2025 | S | 403 | del | 159 | 20250127 |
| EPI_ISL_17370802 | NSP3 | hCoV-19/Sweden/CMHH_03_SE600_500000204224SP/2022 | S | 403 | Q | 60 | 20221211 |
| EPI_ISL_15018971 | NSP3 | hCoV-19/France/IDF-HB-112203110433/2022 | S | 403 | F | 2 | 20220328 |
| EPI_ISL_19831790 | NSP3 | hCoV-19/Ireland/D-SVUH-FBA98558-033/2025 | S | 403 | P | 807 | 20250406 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | S | 403 | E | 3 | 20230410 |
| EPI_ISL_19528143 | NSP3 | hCoV-19/USA/IL-CDC-LC1124735/2024 | S | 403 | T | 59 | 20241024 |
| EPI_ISL_12188157 | NSP3 | hCoV-19/Germany/NW-RKI-I-719108/2022 | S | 403 | V | 10 | 20220324 |
| EPI_ISL_11842064 | NSP3 | hCoV-19/French Guiana/GUF-ERFB-2069034308/2021 | S | 403 | insNV | 1 | 20210810 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | S | 403 | H | 2 | 20230413 |
| EPI_ISL_19769236 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422244359/2025 | V | 404 | A | 202 | 20250113 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 404 | S | 2 | 20210318 |
| EPI_ISL_17763408 | NSP3 | hCoV-19/Finland/THL-05566/2023 | V | 404 | L | 81 | 20230519 |
| EPI_ISL_19524378 | NSP3 | hCoV-19/Argentina/SC2-38169118-RFGB-ARX/2024 | V | 404 | G | 250 | 20240909 |
| EPI_ISL_18984831 | NSP3 | hCoV-19/USA/UT-UPHL-240207962586/2024 | V | 404 | N | 185 | 20240106 |
| EPI_ISL_19716975 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10031/2025 | V | 404 | F | 581 | 20250112 |
| EPI_ISL_11842064 | NSP3 | hCoV-19/French Guiana/GUF-ERFB-2069034308/2021 | V | 404 | Y | 1 | 20210810 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | V | 404 | M | 3 | 20230410 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 404 | T | 2 | 20230217 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | V | 404 | R | 1 | 20211203 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | V | 404 | insLstopLKVNLQ | 1 | 20200715 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 404 | Q | 1 | 20220210 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | V | 404 | stop | 9 | 20230401 |
| EPI_ISL_3941718 | NSP3 | hCoV-19/USA/KS-KSU-2510/2021 | V | 404 | E | 1 | 20210816 |
| EPI_ISL_19794999 | NSP3 | hCoV-19/Canada/QC-L00847917001/2025 | V | 404 | I | 762 | 20250221 |
| EPI_ISL_18208412 | NSP3 | hCoV-19/Shanghai/SCDC-0823-3254/2023 | V | 404 | D | 74 | 20230821 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | V | 404 | insdeldel | 1 | 20211006 |
| EPI_ISL_19718670 | NSP3 | hCoV-19/USA/CO-CDPHE-42909549/2025 | V | 404 | del | 161 | 20250127 |
| EPI_ISL_17706957 | NSP3 | hCoV-19/USA/CA-HLX-STM-DKUWQBHVT/2023 | E | 405 | Q | 25 | 20230501 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | E | 405 | Y | 1 | 20230217 |
| EPI_ISL_19667168 | NSP3 | hCoV-19/Denmark/DCGC-691519/2024 | E | 405 | G | 406 | 20241230 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | E | 405 | F | 2 | 20230217 |
| EPI_ISL_19042011 | NSP3 | hCoV-19/Lithuania/MB231115_0265/2023 | E | 405 | stop | 8 | 20231114 |
| EPI_ISL_10057479 | NSP3 | hCoV-19/USA/ID-IBL-789587/2022 | E | 405 | insGstop | 1 | 20220126 |
| EPI_ISL_19748239 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00021428_01/2024 | E | 405 | D | 38 | 20240705 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | E | 405 | N | 66 | 20230413 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | E | 405 | S | 7 | 20220630 |
| EPI_ISL_19555115 | NSP3 | hCoV-19/Hong Kong/VB24345436/2024 | E | 405 | A | 5294 | 20241108 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | E | 405 | T | 17 | 20230401 |
| EPI_ISL_19464985 | NSP3 | hCoV-19/England/CLIMB-CM7YMWOB/2024 | E | 405 | V | 24 | 20240922 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | E | 405 | R | 383 | 20250107 |
| EPI_ISL_18641480 | NSP3 | hCoV-19/England/CLIMB-CM7YGDTR/2023 | E | 405 | Z | 9 | 20231127 |
| EPI_ISL_19725497 | NSP3 | hCoV-19/USA/MA-MASPHL-13422/2024 | E | 405 | K | 378 | 20241231 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | E | 405 | insstop | 4 | 20220630 |
| EPI_ISL_15553755 | NSP3 | hCoV-19/France/BFC-HMN-22102030285/2022 | E | 405 | insGLWLDDVXXXXXXX | 1 | 20220926 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | E | 405 | insL | 5 | 20220630 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 405 | L | 2 | 20211006 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 405 | I | 1 | 20210318 |
| EPI_ISL_19718670 | NSP3 | hCoV-19/USA/CO-CDPHE-42909549/2025 | E | 405 | del | 156 | 20250127 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | E | 405 | P | 1 | 20201004 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Q | 406 | S | 5 | 20230410 |
| EPI_ISL_1544038 | NSP3 | hCoV-19/India/MH-NCCS-137236/2021 | Q | 406 | insGSstopAIYNstopKstopTFSstopT | 1 | 20210226 |
| EPI_ISL_18635526 | NSP3 | hCoV-19/England/CLIMB-CM7YR3US/2023 | Q | 406 | P | 55 | 20231130 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | Q | 406 | T | 7 | 20220630 |
| EPI_ISL_15514689 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-117374/2022 | Q | 406 | stop | 13 | 20221018 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 406 | F | 1 | 20210318 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 406 | V | 1 | 20220210 |
| EPI_ISL_19633890 | NSP3 | hCoV-19/Canada/AB-ABPHL-128693/2024 | Q | 406 | L | 5692 | 20241204 |
| EPI_ISL_19710843 | NSP3 | hCoV-19/South Africa/NICD-R00013/2024 | Q | 406 | R | 672 | 20241230 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | Q | 406 | N | 8 | 20220630 |
| EPI_ISL_19591919 | NSP3 | hCoV-19/Japan/FR012-0677/2024 | Q | 406 | H | 298 | 20241119 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | Q | 406 | E | 33 | 20240227 |
| EPI_ISL_1109635 | NSP3 | hCoV-19/USA/TN-BEM-0001/2021 | Q | 406 | I | 1 | 20210217 |
| EPI_ISL_9200128 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-73190/2022 | Q | 406 | insXXNKMI | 1 | 20220102 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | Q | 406 | K | 528 | 20250107 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | Q | 406 | G | 8 | 20220506 |
| EPI_ISL_19718670 | NSP3 | hCoV-19/USA/CO-CDPHE-42909549/2025 | Q | 406 | del | 149 | 20250127 |
| EPI_ISL_18843153 | NSP3 | hCoV-19/Japan/PG-569614/2023 | Q | 406 | W | 2 | 20230902 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | R | 407 | N | 6 | 20230108 |
| EPI_ISL_19808082 | NSP3 | hCoV-19/Canada/ON-PHL-202504208/2025 | R | 407 | G | 716 | 20250219 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | R | 407 | D | 1 | 20210722 |
| EPI_ISL_19829137 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136653/2025 | R | 407 | K | 677 | 20250401 |
| EPI_ISL_19212838 | NSP3 | hCoV-19/env/India/MH-NCL-233-04/2023 | R | 407 | E | 72 | 20231204 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | R | 407 | F | 2 | 20211006 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | R | 407 | Q | 14 | 20230217 |
| EPI_ISL_19503784 | NSP3 | hCoV-19/Barbados/BPH-2988443/2024 | R | 407 | del | 171 | 20240903 |
| EPI_ISL_14946250 | NSP3 | hCoV-19/Japan/RIMD14048/2022 | R | 407 | stop | 6 | 20220722 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | R | 407 | A | 1 | 20240227 |
| EPI_ISL_951067 | NSP3 | hCoV-19/England/OXON-F49752/2020 | R | 407 | insS | 1 | 20201231 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | R | 407 | S | 727 | 20250107 |
| EPI_ISL_19825268 | NSP3 | hCoV-19/USA/NY-NYULH-22548/2025 | R | 407 | I | 1506 | 20250406 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | R | 407 | L | 17 | 20220506 |
| EPI_ISL_19262175 | NSP3 | hCoV-19/Spain/CT-BST-910068624/2024 | R | 407 | T | 23 | 20240628 |
| EPI_ISL_19741779 | NSP3 | hCoV-19/Hubei/HCDC-JZ7603/2025 | K | 408 | E | 561 | 20250107 |
| EPI_ISL_19674268 | NSP3 | hCoV-19/Australia/QLD0x015045/2024 | K | 408 | Q | 195 | 20241229 |
| EPI_ISL_19717978 | NSP3 | hCoV-19/Finland/THL-01112/2025 | K | 408 | T | 109 | 20250121 |
| EPI_ISL_14680643 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-1402HAV080/2022 | K | 408 | L | 2 | 20220205 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 408 | G | 2 | 20220210 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | K | 408 | V | 1 | 20211019 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | K | 408 | S | 4 | 20211005 |
| EPI_ISL_18902721 | NSP3 | hCoV-19/USA/CA-CDPH-500132042/2023 | K | 408 | I | 70 | 20231227 |
| EPI_ISL_19503784 | NSP3 | hCoV-19/Barbados/BPH-2988443/2024 | K | 408 | del | 177 | 20240903 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | K | 408 | A | 1 | 20210722 |
| EPI_ISL_19426104 | NSP3 | hCoV-19/Ireland/D-SVUH-FAZ98986-004/2024 | K | 408 | N | 515 | 20240915 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | K | 408 | F | 5 | 20220506 |
| EPI_ISL_19795475 | NSP3 | hCoV-19/Canada/ON-KHS-202500721-v1/2025 | K | 408 | R | 887 | 20250224 |
| EPI_ISL_3941718 | NSP3 | hCoV-19/USA/KS-KSU-2510/2021 | K | 408 | M | 1 | 20210816 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | K | 408 | P | 1 | 20230217 |
| EPI_ISL_12188157 | NSP3 | hCoV-19/Germany/NW-RKI-I-719108/2022 | K | 408 | H | 2 | 20220324 |
| EPI_ISL_13847357 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2942/2022 | K | 408 | stop | 3 | 20220630 |
| EPI_ISL_19503784 | NSP3 | hCoV-19/Barbados/BPH-2988443/2024 | Q | 409 | del | 197 | 20240903 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | Q | 409 | M | 1 | 20200807 |
| EPI_ISL_5649606 | NSP3 | hCoV-19/Brazil/SP-IB_111511/2021 | Q | 409 | F | 1 | 20210524 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Q | 409 | E | 21 | 20240123 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | Q | 409 | insI | 1 | 20210801 |
| EPI_ISL_19816907 | NSP3 | hCoV-19/Norway/2482/2025 | Q | 409 | R | 318 | 20250211 |
| EPI_ISL_19745168 | NSP3 | hCoV-19/Peru/LOR-INS-51236/2024 | Q | 409 | K | 401 | 20241217 |
| EPI_ISL_19802044 | NSP3 | hCoV-19/USA/IL-RIPHL_123959_G/2025 | Q | 409 | H | 67 | 20250228 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 409 | G | 1 | 20210318 |
| EPI_ISL_15089363 | NSP3 | hCoV-19/Russia/MOW-RSMU-NQQ994/2022 | Q | 409 | N | 4 | 20220127 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | Q | 409 | T | 4 | 20240227 |
| EPI_ISL_19795890 | NSP3 | hCoV-19/Australia/WA16845/2025 | Q | 409 | L | 417 | 20250305 |
| EPI_ISL_9200128 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-73190/2022 | Q | 409 | S | 3 | 20220102 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | Q | 409 | insTRstopYstop | 1 | 20210803 |
| EPI_ISL_3588754 | NSP3 | hCoV-19/USA/ID-IBL-746258/2021 | Q | 409 | insstop | 1 | 20210801 |
| EPI_ISL_19060888 | NSP3 | hCoV-19/Russia/MO-RII-MH179640S/2024 | Q | 409 | P | 64 | 20240110 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | Q | 409 | D | 466 | 20230217 |
| EPI_ISL_12934304 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1524/2022 | Q | 409 | stop | 7 | 20220107 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Q | 409 | V | 1 | 20211006 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | Q | 409 | A | 3 | 20210722 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | D | 410 | I | 2 | 20211115 |
| EPI_ISL_19192552 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15977/2024 | D | 410 | stop | 12 | 20240314 |
| EPI_ISL_19666410 | NSP3 | hCoV-19/Chile/ML-ISPC-101088/2024 | D | 410 | N | 417 | 20241215 |
| EPI_ISL_19700817 | NSP3 | hCoV-19/Japan/FR302-1831/2024 | D | 410 | Y | 971 | 20241225 |
| EPI_ISL_19503784 | NSP3 | hCoV-19/Barbados/BPH-2988443/2024 | D | 410 | del | 181 | 20240903 |
| EPI_ISL_4530141 | NSP3 | hCoV-19/England/PHEC-3G06FGDD/2021 | D | 410 | R | 2 | 20210921 |
| EPI_ISL_9200128 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-73190/2022 | D | 410 | K | 5 | 20220102 |
| EPI_ISL_16441157 | NSP3 | hCoV-19/England/BRBR-32669CA8/2022 | D | 410 | H | 4 | 20221228 |
| EPI_ISL_12188157 | NSP3 | hCoV-19/Germany/NW-RKI-I-719108/2022 | D | 410 | T | 3 | 20220324 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | D | 410 | C | 179 | 20230217 |
| EPI_ISL_11945698 | NSP3 | hCoV-19/England/DHSC-CYNDXRI/2022 | D | 410 | insGGGVAGAL | 1 | 20220203 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | D | 410 | V | 417 | 20250107 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 410 | S | 4 | 20220210 |
| EPI_ISL_19212838 | NSP3 | hCoV-19/env/India/MH-NCL-233-04/2023 | D | 410 | M | 78 | 20231204 |
| EPI_ISL_9200128 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-73190/2022 | D | 410 | insLV | 1 | 20220102 |
| EPI_ISL_19763876 | NSP3 | hCoV-19/Japan/FR084-0033/2025 | D | 410 | E | 68 | 20250207 |
| EPI_ISL_19742597 | NSP3 | hCoV-19/Chile/AR-9409/2025 | D | 410 | A | 92 | 20250126 |
| EPI_ISL_19825349 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-30C-MM00039R/2025 | D | 410 | G | 82600 | 20250330 |
| EPI_ISL_19552589 | NSP3 | hCoV-19/Wales/CLIMB-CM7YRWSQ/2024 | D | 410 | B | 11 | 20241104 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | D | 410 | Q | 1 | 20220210 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | D | 410 | L | 4 | 20220210 |
| EPI_ISL_19691285 | NSP3 | hCoV-19/France/IDF-RELAB-IPP00703/2025 | D | 411 | N | 2489 | 20250103 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | D | 411 | insMI | 1 | 20210812 |
| EPI_ISL_19212838 | NSP3 | hCoV-19/env/India/MH-NCL-233-04/2023 | D | 411 | I | 82 | 20231204 |
| EPI_ISL_16491400 | NSP3 | hCoV-19/Peru/AYA-INS-37619/2022 | D | 411 | V | 20 | 20221206 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | D | 411 | S | 15 | 20230217 |
| EPI_ISL_6025241 | NSP3 | hCoV-19/India/DL-ILBS-112449/2021 | D | 411 | insM | 1 | 20210504 |
| EPI_ISL_15181162 | NSP3 | hCoV-19/USA/CA-CDPH-FS25392798/2022 | D | 411 | insD | 12 | 20220829 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | D | 411 | L | 388 | 20250107 |
| EPI_ISL_17811462 | NSP3 | hCoV-19/Spain/MD-H12O_287/2023 | D | 411 | Y | 198 | 20230531 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | D | 411 | T | 1 | 20231121 |
| EPI_ISL_1360732 | NSP3 | hCoV-19/Switzerland/BL-ETHZ-530405/2021 | D | 411 | insTRKSKLVL | 1 | 20210311 |
| EPI_ISL_1730447 | NSP3 | hCoV-19/Scotland/OXON-F7E1CF/2021 | D | 411 | insKLVL | 1 | 20210318 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | D | 411 | stop | 10 | 20230401 |
| EPI_ISL_12188157 | NSP3 | hCoV-19/Germany/NW-RKI-I-719108/2022 | D | 411 | Q | 4 | 20220324 |
| EPI_ISL_19757891 | NSP3 | hCoV-19/Spain/CT-LabRefCat-5018385/2025 | D | 411 | G | 910 | 20250206 |
| EPI_ISL_12467156 | NSP3 | hCoV-19/Sweden/09_SE100_22CS103788/2022 | D | 411 | B | 25 | 20220418 |
| EPI_ISL_19739384 | NSP3 | hCoV-19/USA/NJ-CDC-LC1131800/2025 | D | 411 | E | 939 | 20250203 |
| EPI_ISL_19503784 | NSP3 | hCoV-19/Barbados/BPH-2988443/2024 | D | 411 | del | 159 | 20240903 |
| EPI_ISL_840203 | NSP3 | hCoV-19/England/OXON-F3EF1C/2020 | D | 411 | R | 2 | 20201103 |
| EPI_ISL_13847304 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2948/2022 | D | 411 | C | 8 | 20220701 |
| EPI_ISL_10875631 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-94176/2021 | D | 411 | insIRKSKLVL | 1 | 20211229 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | D | 411 | W | 4 | 20220210 |
| EPI_ISL_15293834 | NSP3 | hCoV-19/India/MH-NCCS-309470857/2021 | D | 411 | insRKSLVL | 1 | 20211226 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | D | 411 | insQENPKLVL | 1 | 20210802 |
| EPI_ISL_12785533 | NSP3 | hCoV-19/India/UP-ICMR-INSACOG-KGMU-ZY64-065/2022 | D | 411 | K | 6 | 20220503 |
| EPI_ISL_19084324 | NSP3 | hCoV-19/Japan/FR302-0487/2024 | D | 411 | A | 159 | 20240329 |
| EPI_ISL_10875631 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-94176/2021 | D | 411 | M | 2 | 20211229 |
| EPI_ISL_15537687 | NSP3 | hCoV-19/France/NAQ-GENBIO-B07GN2767910/2022 | D | 411 | H | 8 | 20221003 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | K | 412 | S | 10 | 20221126 |
| EPI_ISL_19629585 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-13L-MM00058R/2024 | K | 412 | E | 123 | 20241213 |
| EPI_ISL_19503784 | NSP3 | hCoV-19/Barbados/BPH-2988443/2024 | K | 412 | del | 155 | 20240903 |
| EPI_ISL_14996717 | NSP3 | hCoV-19/Turkey/HSGM-GS7429/2022 | K | 412 | insREGPV | 1 | 20220801 |
| EPI_ISL_12188157 | NSP3 | hCoV-19/Germany/NW-RKI-I-719108/2022 | K | 412 | A | 2 | 20220324 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | K | 412 | stop | 4 | 20211014 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | K | 412 | C | 1 | 20211019 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 412 | G | 1 | 20220210 |
| EPI_ISL_7852037 | NSP3 | hCoV-19/USA/NY-PRL-2021_1208_00M12/2021 | K | 412 | insMI | 1 | 20211206 |
| EPI_ISL_1080175 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-25682/2021 | K | 412 | insI | 2 | 20210201 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | K | 412 | H | 10 | 20231218 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | K | 412 | V | 1 | 20231121 |
| EPI_ISL_19677592 | NSP3 | hCoV-19/Argentina/INEI127050/2024 | K | 412 | M | 12 | 20241008 |
| EPI_ISL_19697965 | NSP3 | hCoV-19/Switzerland/BS-USB_5b0e304b_fce2ef8d/2024 | K | 412 | T | 86 | 20241224 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 412 | F | 1 | 20210318 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | K | 412 | L | 1 | 20230413 |
| EPI_ISL_5339759 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-50359/2021 | K | 412 | P | 2 | 20210717 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 412 | Q | 20 | 20230410 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 412 | D | 1 | 20220210 |
| EPI_ISL_19684396 | NSP3 | hCoV-19/Japan/FR049-1157/2024 | K | 412 | R | 550 | 20241211 |
| EPI_ISL_19833055 | NSP3 | hCoV-19/France/ARA-RELAB-HCL725000043801/2025 | K | 412 | N | 4652 | 20250324 |
| EPI_ISL_17616426 | NSP3 | hCoV-19/Ethiopia/CO_GX_207/2022 | K | 412 | W | 1 | 20220628 |
| EPI_ISL_19633682 | NSP3 | hCoV-19/Canada/BC-BCCDC-757443/2024 | K | 413 | R | 599 | 20241210 |
| EPI_ISL_16401760 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1105/2022 | K | 413 | stop | 9 | 20221126 |
| EPI_ISL_5339759 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-50359/2021 | K | 413 | insEE | 2 | 20210717 |
| EPI_ISL_19666079 | NSP3 | hCoV-19/USA/MD-CDC-LC1128172/2025 | K | 413 | E | 147 | 20250102 |
| EPI_ISL_11949094 | NSP3 | hCoV-19/England/DHSC-CYY367E/2022 | K | 413 | insSAAEAS | 1 | 20220210 |
| EPI_ISL_11279776 | NSP3 | hCoV-19/Denmark/DCGC-436049/2022 | K | 413 | I | 1 | 20220315 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | K | 413 | P | 3 | 20231121 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | K | 413 | Y | 1 | 20230413 |
| EPI_ISL_1941634 | NSP3 | hCoV-19/Japan/PG-29527/2021 | K | 413 | L | 2 | 20210320 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 413 | D | 1 | 20220210 |
| EPI_ISL_10833810 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-90854/2022 | K | 413 | M | 6 | 20220209 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | K | 413 | V | 7 | 20230217 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | K | 413 | S | 12 | 20231218 |
| EPI_ISL_19540325 | NSP3 | hCoV-19/USA/CO-CDPHE-42384495/2024 | K | 413 | N | 334 | 20241005 |
| EPI_ISL_19365387 | NSP3 | hCoV-19/Japan/FR001-0239/2024 | K | 413 | T | 115 | 20240821 |
| EPI_ISL_18424309 | NSP3 | hCoV-19/Mexico/BCN_InDRE_FB4304/2023 | K | 413 | Q | 26 | 20230828 |
| EPI_ISL_19739384 | NSP3 | hCoV-19/USA/NJ-CDC-LC1131800/2025 | K | 413 | del | 1037 | 20250203 |
| EPI_ISL_18768660 | NSP3 | hCoV-19/Canada/ON-PHL-202401069/2024 | I | 414 | F | 30 | 20240101 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | I | 414 | Y | 1 | 20211005 |
| EPI_ISL_9974143 | NSP3 | hCoV-19/France/GES-HMN-22012190572/2022 | I | 414 | J | 3 | 20220110 |
| EPI_ISL_18983447 | NSP3 | hCoV-19/England/CLIMB-CM7YMGMS/2024 | I | 414 | S | 157 | 20240305 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | I | 414 | L | 487 | 20250107 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | I | 414 | insSSSQ | 1 | 20200805 |
| EPI_ISL_10672049 | NSP3 | hCoV-19/Spain/GA-CHUVI-19523197/2022 | I | 414 | N | 10 | 20220212 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | I | 414 | G | 3 | 20211014 |
| EPI_ISL_19540325 | NSP3 | hCoV-19/USA/CO-CDPHE-42384495/2024 | I | 414 | Q | 21 | 20241005 |
| EPI_ISL_19704444 | NSP3 | hCoV-19/Switzerland/un-SNRCI-HUG-46620600/2024 | I | 414 | T | 1863 | 20241205 |
| EPI_ISL_17118324 | NSP3 | hCoV-19/Indonesia/SU-NIHRD-W00410/2022 | I | 414 | M | 12 | 20221116 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | I | 414 | del | 129 | 20240316 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 414 | D | 1 | 20210318 |
| EPI_ISL_5527848 | NSP3 | hCoV-19/England/MILK-27D3DA8/2021 | I | 414 | P | 1 | 20211019 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | I | 414 | Z | 1 | 20230217 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | I | 414 | H | 1 | 20211228 |
| EPI_ISL_18423846 | NSP3 | hCoV-19/USA/TX-HMH-134853/2023 | I | 414 | K | 3 | 20231009 |
| EPI_ISL_19460204 | NSP3 | hCoV-19/Canada/AB-ABPHL-123606/2024 | I | 414 | V | 1069 | 20240922 |
| EPI_ISL_15018971 | NSP3 | hCoV-19/France/IDF-HB-112203110433/2022 | I | 414 | insXX | 1 | 20220328 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | I | 414 | R | 2 | 20231121 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | I | 414 | C | 3 | 20240227 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | K | 415 | G | 1 | 20210525 |
| EPI_ISL_15756989 | NSP3 | hCoV-19/Fujian/2021BD-VIR-SPE-1325/2022 | K | 415 | stop | 3 | 20220106 |
| EPI_ISL_19784145 | NSP3 | hCoV-19/USA/NC-CDC-LC1134511/2025 | K | 415 | R | 419 | 20250306 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 415 | A | 2 | 20230410 |
| EPI_ISL_2967507 | NSP3 | hCoV-19/South Korea/KDCA5794/2021 | K | 415 | insGYL | 1 | 20210628 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | K | 415 | insKS | 1 | 20210803 |
| EPI_ISL_19540325 | NSP3 | hCoV-19/USA/CO-CDPHE-42384495/2024 | K | 415 | S | 29 | 20241005 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 415 | W | 1 | 20220210 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | K | 415 | I | 32 | 20231121 |
| EPI_ISL_19370613 | NSP3 | hCoV-19/Thailand/NIC_KBI_1442/2024 | K | 415 | T | 63 | 20240604 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 415 | C | 1 | 20210318 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | K | 415 | Q | 565 | 20250107 |
| EPI_ISL_19825294 | NSP3 | hCoV-19/USA/NY-NYULH-22577/2025 | K | 415 | N | 215 | 20250404 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | K | 415 | del | 128 | 20240316 |
| EPI_ISL_10206846 | NSP3 | hCoV-19/USA/NC-ECU-112053711/2022 | K | 415 | Y | 1 | 20220207 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | K | 415 | V | 1 | 20211019 |
| EPI_ISL_12188157 | NSP3 | hCoV-19/Germany/NW-RKI-I-719108/2022 | K | 415 | H | 2 | 20220324 |
| EPI_ISL_10971027 | NSP3 | hCoV-19/England/MILK-397C4A7/2022 | K | 415 | insSSGV | 7 | 20220304 |
| EPI_ISL_19704495 | NSP3 | hCoV-19/Switzerland/un-SNRCI-HUG-46533652/2024 | K | 415 | E | 292 | 20241126 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | K | 415 | L | 2 | 20230217 |
| EPI_ISL_11377489 | NSP3 | hCoV-19/France/GES-HMN-22022041245/2022 | K | 415 | M | 1 | 20220117 |
| EPI_ISL_1941634 | NSP3 | hCoV-19/Japan/PG-29527/2021 | K | 415 | insS | 1 | 20210320 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | A | 416 | Q | 397 | 20250107 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | A | 416 | R | 2 | 20230217 |
| EPI_ISL_15507406 | NSP3 | hCoV-19/Thailand/NIC_SRI_22377/2022 | A | 416 | D | 80 | 20220804 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | A | 416 | P | 8 | 20240123 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | A | 416 | C | 1 | 20211019 |
| EPI_ISL_18933364 | NSP3 | hCoV-19/env/Germany/BY-LGL-6146797/2024 | A | 416 | T | 127 | 20240131 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | A | 416 | stop | 3 | 20211014 |
| EPI_ISL_17686011 | NSP3 | hCoV-19/USA/TX-HMH-128859/2023 | A | 416 | insL | 2 | 20230503 |
| EPI_ISL_7314261 | NSP3 | hCoV-19/USA/ID-IBL-772740/2021 | A | 416 | N | 2 | 20211005 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | A | 416 | E | 3 | 20230413 |
| EPI_ISL_19679701 | NSP3 | hCoV-19/Canada/BC-BCCDC-763018/2024 | A | 416 | V | 1793 | 20241230 |
| EPI_ISL_3033234 | NSP3 | hCoV-19/USA/HI-H212872/2021 | A | 416 | H | 28 | 20210617 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | A | 416 | K | 4 | 20211228 |
| EPI_ISL_19833181 | NSP3 | hCoV-19/France/CVL-RELAB-IPP04114/2025 | A | 416 | S | 235 | 20250325 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | A | 416 | G | 9 | 20230217 |
| EPI_ISL_19540325 | NSP3 | hCoV-19/USA/CO-CDPHE-42384495/2024 | A | 416 | L | 135 | 20241005 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | A | 416 | del | 89 | 20240316 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 416 | I | 1 | 20211006 |
| EPI_ISL_19025173 | NSP3 | hCoV-19/USA/OH-ODH-SC4031137/2024 | C | 417 | F | 51 | 20240318 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | C | 417 | J | 1 | 20230217 |
| EPI_ISL_3917474 | NSP3 | hCoV-19/Netherlands/GL-RIVM-53259/2021 | C | 417 | H | 1 | 20210815 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | C | 417 | I | 3 | 20230410 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | C | 417 | S | 44 | 20230217 |
| EPI_ISL_13962039 | NSP3 | hCoV-19/Italy/FVG-UD-333343/2022 | C | 417 | G | 19 | 20220624 |
| EPI_ISL_12319884 | NSP3 | hCoV-19/Turkey/HSGM-GS1639/2022 | C | 417 | stop | 1 | 20220401 |
| EPI_ISL_19588617 | NSP3 | hCoV-19/USA/CA-Stanford-198_S16/2024 | C | 417 | R | 119 | 20241111 |
| EPI_ISL_11318051 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-5718/2022 | C | 417 | Q | 3 | 20220112 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | C | 417 | insHP | 2 | 20230217 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | C | 417 | T | 4 | 20240123 |
| EPI_ISL_5087253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46441/2020 | C | 417 | insKL | 1 | 20200730 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | C | 417 | N | 1 | 20210525 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | C | 417 | del | 88 | 20240316 |
| EPI_ISL_19454951 | NSP3 | hCoV-19/England/SFK-USAFSAM-S23039/2024 | C | 417 | Y | 486 | 20240910 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 417 | E | 1 | 20220210 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | C | 417 | M | 1 | 20210722 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | C | 417 | A | 3 | 20211014 |
| EPI_ISL_14011506 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-10248/2022 | C | 417 | W | 5 | 20220715 |
| EPI_ISL_18463605 | NSP3 | hCoV-19/USA/IL-C23WGS3106/2023 | C | 417 | D | 7 | 20231016 |
| EPI_ISL_18983447 | NSP3 | hCoV-19/England/CLIMB-CM7YMGMS/2024 | C | 417 | V | 105 | 20240305 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | C | 417 | L | 400 | 20250107 |
| EPI_ISL_13273999 | NSP3 | hCoV-19/Australia/ACT4752/2022 | V | 418 | A | 103 | 20220329 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | V | 418 | Y | 1 | 20210812 |
| EPI_ISL_11949032 | NSP3 | hCoV-19/England/DHSC-CYY1MXG/2022 | V | 418 | S | 2 | 20220116 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | V | 418 | W | 395 | 20250107 |
| EPI_ISL_18983447 | NSP3 | hCoV-19/England/CLIMB-CM7YMGMS/2024 | V | 418 | L | 122 | 20240305 |
| EPI_ISL_19816887 | NSP3 | hCoV-19/Norway/4650/2025 | V | 418 | I | 600 | 20250321 |
| EPI_ISL_17686011 | NSP3 | hCoV-19/USA/TX-HMH-128859/2023 | V | 418 | stop | 10 | 20230503 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | V | 418 | P | 4 | 20230410 |
| EPI_ISL_14584691 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-16304/2022 | V | 418 | G | 6 | 20220808 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | V | 418 | del | 77 | 20240316 |
| EPI_ISL_17372575 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2634/2022 | V | 418 | insVW | 1 | 20221230 |
| EPI_ISL_9353762 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC4541/2022 | V | 418 | insQP | 1 | 20220105 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 418 | E | 1 | 20220210 |
| EPI_ISL_9472872 | NSP3 | hCoV-19/India/WB-INSACOG-1931502626342/2021 | V | 418 | insPAS | 1 | 20211228 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | V | 418 | T | 3 | 20230217 |
| EPI_ISL_19617270 | NSP3 | hCoV-19/USA/WI-WSLH-2401979/2024 | V | 418 | F | 1727 | 20240809 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 418 | C | 2 | 20210318 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | V | 418 | M | 1 | 20210525 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 418 | D | 1 | 20220210 |
| EPI_ISL_19309016 | NSP3 | hCoV-19/Japan/FR004-0230/2024 | E | 419 | A | 84 | 20240712 |
| EPI_ISL_19132218 | NSP3 | hCoV-19/USA/CA-SCPHL-24WGS00108/2024 | E | 419 | Q | 36 | 20240217 |
| EPI_ISL_19176345 | NSP3 | hCoV-19/Spain/CE-HUCE-4231745/2024 | E | 419 | V | 13 | 20240313 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | E | 419 | H | 8 | 20220506 |
| EPI_ISL_17400351 | NSP3 | hCoV-19/England/BRBR-32715888/2023 | E | 419 | Z | 8 | 20230328 |
| EPI_ISL_19350693 | NSP3 | hCoV-19/USA/CA-MCPHL-GBD00584/2024 | E | 419 | G | 114 | 20240729 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 419 | N | 5 | 20230420 |
| EPI_ISL_17530361 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14065/2023 | E | 419 | S | 3 | 20230407 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | E | 419 | R | 12 | 20230401 |
| EPI_ISL_11949032 | NSP3 | hCoV-19/England/DHSC-CYY1MXG/2022 | E | 419 | I | 1 | 20220116 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | E | 419 | L | 2 | 20210803 |
| EPI_ISL_19324244 | NSP3 | hCoV-19/France/GES-IPP08397/2024 | E | 419 | D | 93 | 20240715 |
| EPI_ISL_19719078 | NSP3 | hCoV-19/env/Germany/BY-LGL-6467963/2025 | E | 419 | stop | 9 | 20250115 |
| EPI_ISL_12223838 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0830/2022 | E | 419 | Y | 4 | 20220112 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | E | 419 | del | 76 | 20240316 |
| EPI_ISL_19806334 | NSP3 | hCoV-19/Canada/ON-HRL-20251018770200-v1/2025 | E | 419 | K | 830 | 20250215 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | E | 419 | insPT | 6 | 20220506 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | E | 419 | F | 1 | 20230413 |
| EPI_ISL_6460854 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-GSEQ-6308/2021 | E | 419 | T | 5 | 20211012 |
| EPI_ISL_17612387 | NSP3 | hCoV-19/Sweden/M-SUS0021255/2023 | E | 420 | V | 16 | 20230424 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | E | 420 | G | 12 | 20230420 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | E | 420 | Q | 30 | 20230418 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | E | 420 | N | 8 | 20230217 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | E | 420 | D | 134 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 420 | W | 1 | 20210318 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | E | 420 | T | 13 | 20231218 |
| EPI_ISL_13720110 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-111/2022 | E | 420 | L | 1 | 20220617 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | E | 420 | del | 80 | 20240316 |
| EPI_ISL_16861820 | NSP3 | hCoV-19/Thailand/NIC_CTI_497/2023 | E | 420 | Z | 8 | 20230114 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | E | 420 | K | 671 | 20250107 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | E | 420 | R | 4 | 20230408 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | E | 420 | H | 1 | 20200805 |
| EPI_ISL_14072852 | NSP3 | hCoV-19/Israel/ICH-741177367/2022 | E | 420 | stop | 12 | 20220719 |
| EPI_ISL_17530361 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14065/2023 | E | 420 | S | 16 | 20230407 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | E | 420 | A | 21 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 421 | N | 1 | 20210318 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | V | 421 | insQQLWKKL | 1 | 20200803 |
| EPI_ISL_19811959 | NSP3 | hCoV-19/Australia/QLD0x0153F1/2025 | V | 421 | A | 51 | 20250312 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | V | 421 | L | 529 | 20250107 |
| EPI_ISL_17530361 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14065/2023 | V | 421 | Q | 5 | 20230407 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | V | 421 | stop | 6 | 20230217 |
| EPI_ISL_19688905 | NSP3 | hCoV-19/USA/NY-URMC-P2S1T541-1/2024 | V | 421 | I | 564 | 20241231 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | V | 421 | S | 5 | 20230217 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | V | 421 | K | 10 | 20230418 |
| EPI_ISL_19618817 | NSP3 | hCoV-19/Egypt/CPHL-EGY24379/2024 | V | 421 | F | 213 | 20240806 |
| EPI_ISL_11348095 | NSP3 | hCoV-19/Belarus/HM-CRIE-7735754979/2022 | V | 421 | G | 1 | 20220104 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | V | 421 | P | 3 | 20230217 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | V | 421 | T | 2 | 20230413 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | V | 421 | del | 75 | 20240316 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | V | 421 | Y | 10 | 20230401 |
| EPI_ISL_13346769 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2364/2022 | V | 421 | D | 3 | 20220604 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | V | 421 | M | 1 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 421 | E | 2 | 20220210 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | T | 422 | G | 1 | 20230217 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 422 | V | 5 | 20240123 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | T | 422 | R | 16 | 20231218 |
| EPI_ISL_8804029 | NSP3 | hCoV-19/India/MH-NCCS-2750000373169/2021 | T | 422 | M | 1 | 20210722 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | T | 422 | N | 10 | 20230401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 422 | H | 1 | 20210318 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 422 | W | 1 | 20220210 |
| EPI_ISL_19828145 | NSP3 | hCoV-19/Australia/QLD0x0154C4/2025 | T | 422 | I | 8804 | 20250330 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | T | 422 | P | 11 | 20230614 |
| EPI_ISL_19488133 | NSP3 | hCoV-19/France/CVL-IPP11103/2024 | T | 422 | A | 288 | 20240923 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | T | 422 | Y | 1 | 20221228 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | T | 422 | Q | 48 | 20230217 |
| EPI_ISL_16744874 | NSP3 | hCoV-19/Chile/RM-1120/2023 | T | 422 | D | 1 | 20230105 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | T | 422 | S | 420 | 20250107 |
| EPI_ISL_15542474 | NSP3 | hCoV-19/Sweden/03_SE600_000200478067N2/2022 | T | 422 | insXX | 1 | 20221018 |
| EPI_ISL_19685811 | NSP3 | hCoV-19/Ireland/D-SVUH-FAZ12591-049/2024 | T | 422 | K | 84 | 20241213 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | T | 422 | E | 3 | 20230413 |
| EPI_ISL_5924578 | NSP3 | hCoV-19/Czech Republic/FNP0115/2021 | T | 422 | insCS | 2 | 20210709 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | T | 422 | del | 85 | 20240316 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | T | 422 | L | 5 | 20230408 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | T | 423 | P | 17 | 20230614 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | T | 423 | W | 1 | 20210313 |
| EPI_ISL_18606694 | NSP3 | hCoV-19/Greece/PHL_KEDY_12866/2023 | T | 423 | A | 123 | 20231013 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | T | 423 | H | 2 | 20230217 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | T | 423 | stop | 4 | 20211014 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 423 | F | 1 | 20211006 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | T | 423 | V | 3 | 20230408 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | T | 423 | S | 423 | 20250107 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | T | 423 | Q | 51 | 20230217 |
| EPI_ISL_18798147 | NSP3 | hCoV-19/Canada/NS-NSH-690384/2024 | T | 423 | K | 90 | 20240105 |
| EPI_ISL_19825275 | NSP3 | hCoV-19/USA/NY-NYULH-22556/2025 | T | 423 | I | 6109 | 20250407 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 423 | N | 14 | 20240123 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | T | 423 | del | 83 | 20240316 |
| EPI_ISL_18122903 | NSP3 | hCoV-19/Japan/PG-556239/2023 | T | 423 | R | 11 | 20230724 |
| EPI_ISL_10943991 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8799/2022 | T | 423 | L | 6 | 20220208 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | T | 423 | E | 1 | 20230413 |
| EPI_ISL_11949032 | NSP3 | hCoV-19/England/DHSC-CYY1MXG/2022 | T | 423 | insGXXXXXX | 1 | 20220116 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 423 | D | 1 | 20220210 |
| EPI_ISL_19596576 | NSP3 | hCoV-19/Italy/EMR-BO_3290/2024 | T | 424 | A | 121 | 20241115 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 424 | E | 1 | 20220210 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | T | 424 | D | 1 | 20210525 |
| EPI_ISL_10943991 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8799/2022 | T | 424 | Y | 1 | 20220208 |
| EPI_ISL_13499600 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC6601/2022 | T | 424 | V | 4 | 20220228 |
| EPI_ISL_19565048 | NSP3 | hCoV-19/France/CVL-RELAB-HCL724000590601/2024 | T | 424 | N | 664 | 20241029 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | T | 424 | G | 1 | 20200729 |
| EPI_ISL_13961784 | NSP3 | hCoV-19/Israel/SMC-7090326/2022 | T | 424 | insT | 17 | 20220710 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | T | 424 | stop | 2 | 20220124 |
| EPI_ISL_17616416 | NSP3 | hCoV-19/Ethiopia/CO_GX_033/2022 | T | 424 | M | 1 | 20220622 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | T | 424 | L | 54 | 20230413 |
| EPI_ISL_18562974 | NSP3 | hCoV-19/USA/NM-NMDOH-2023043577/2023 | T | 424 | P | 38 | 20231023 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | T | 424 | W | 1 | 20220112 |
| EPI_ISL_18163681 | NSP3 | hCoV-19/Spain/AS-HUCA-232347416/2023 | T | 424 | K | 6 | 20230802 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | T | 424 | insGRNstop | 4 | 20230401 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | T | 424 | H | 9 | 20220506 |
| EPI_ISL_19471498 | NSP3 | hCoV-19/USA/MI-UM-10059398324/2024 | T | 424 | del | 166 | 20240829 |
| EPI_ISL_14395161 | NSP3 | hCoV-19/Germany/HB-RKI-I-920526/2022 | T | 424 | insKTNT | 1 | 20220709 |
| EPI_ISL_17530361 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14065/2023 | T | 424 | C | 4 | 20230407 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 424 | Q | 3 | 20220210 |
| EPI_ISL_19665697 | NSP3 | hCoV-19/Sweden/T-60259954/2024 | T | 424 | I | 2923 | 20241214 |
| EPI_ISL_8049928 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6793/2021 | T | 424 | F | 1 | 20211007 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | T | 424 | S | 458 | 20250107 |
| EPI_ISL_17500666 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13856/2023 | L | 425 | S | 8 | 20230329 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 425 | E | 2 | 20220210 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | L | 425 | insW | 1 | 20200807 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | L | 425 | H | 2 | 20230429 |
| EPI_ISL_18389074 | NSP3 | hCoV-19/USA/HI-H2325246/2023 | L | 425 | M | 177 | 20230927 |
| EPI_ISL_18813092 | NSP3 | hCoV-19/USA/CA-SEARCH-136706/2023 | L | 425 | V | 25 | 20230731 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | L | 425 | A | 4 | 20240123 |
| EPI_ISL_17530361 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14065/2023 | L | 425 | Y | 4 | 20230407 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | L | 425 | stop | 3 | 20220124 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | L | 425 | C | 2 | 20221228 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | L | 425 | T | 3 | 20230413 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | L | 425 | W | 46 | 20210806 |
| EPI_ISL_16744874 | NSP3 | hCoV-19/Chile/RM-1120/2023 | L | 425 | F | 4 | 20230105 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | L | 425 | K | 2 | 20220112 |
| EPI_ISL_17616416 | NSP3 | hCoV-19/Ethiopia/CO_GX_033/2022 | L | 425 | I | 4 | 20220622 |
| EPI_ISL_19043472 | NSP3 | hCoV-19/USA/NM-NMDOH-005287/2024 | L | 425 | R | 19 | 20240115 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | L | 425 | Q | 592 | 20250107 |
| EPI_ISL_18686445 | NSP3 | hCoV-19/USA/MN-CDC-VSX-A16158/2023 | L | 425 | P | 140 | 20231128 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | L | 425 | del | 122 | 20240316 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | L | 425 | G | 1 | 20210805 |
| EPI_ISL_11664538 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3401/2022 | E | 426 | L | 3 | 20220306 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | E | 426 | del | 119 | 20240316 |
| EPI_ISL_17500666 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13856/2023 | E | 426 | S | 16 | 20230329 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 426 | F | 1 | 20210318 |
| EPI_ISL_17585723 | NSP3 | hCoV-19/Egypt/ARMY-CU125/2022 | E | 426 | W | 3 | 20221014 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | E | 426 | N | 2 | 20240123 |
| EPI_ISL_8688196 | NSP3 | hCoV-19/Spain/AS-262164926/2021 | E | 426 | I | 1 | 20211026 |
| EPI_ISL_17616416 | NSP3 | hCoV-19/Ethiopia/CO_GX_033/2022 | E | 426 | R | 2 | 20220622 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | E | 426 | M | 1 | 20210525 |
| EPI_ISL_16401634 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1131/2022 | E | 426 | stop | 13 | 20221130 |
| EPI_ISL_19524513 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55489/2024 | E | 426 | A | 364 | 20241024 |
| EPI_ISL_16861820 | NSP3 | hCoV-19/Thailand/NIC_CTI_497/2023 | E | 426 | Z | 12 | 20230114 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | E | 426 | Y | 1 | 20220210 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | E | 426 | P | 9 | 20230401 |
| EPI_ISL_19792846 | NSP3 | hCoV-19/USA/NY-PRL-250318_81E09/2025 | E | 426 | G | 285 | 20250310 |
| EPI_ISL_19825027 | NSP3 | hCoV-19/USA/CA-PFZ04947/2025 | E | 426 | K | 1137 | 20250314 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | E | 426 | T | 2 | 20230413 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | E | 426 | insV | 7 | 20220506 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | E | 426 | V | 23 | 20230217 |
| EPI_ISL_18255099 | NSP3 | hCoV-19/Pakistan/PACP-B13-S01/2023 | E | 426 | Q | 12 | 20230321 |
| EPI_ISL_19616794 | NSP3 | hCoV-19/USA/CO-CDPHE-42539363/2024 | E | 426 | D | 198 | 20241129 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | E | 427 | N | 2 | 20220124 |
| EPI_ISL_12955775 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748299/2022 | E | 427 | Y | 1 | 20220227 |
| EPI_ISL_12321622 | NSP3 | hCoV-19/Turkey/HSGM-GS2492/2022 | E | 427 | stop | 12 | 20220405 |
| EPI_ISL_8688196 | NSP3 | hCoV-19/Spain/AS-262164926/2021 | E | 427 | F | 1 | 20211026 |
| EPI_ISL_11370187 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-45/2022 | E | 427 | insLW | 1 | 20220220 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | E | 427 | T | 404 | 20250107 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | E | 427 | H | 10 | 20230401 |
| EPI_ISL_19351190 | NSP3 | hCoV-19/Netherlands/GE-RIVM-140848/2024 | E | 427 | A | 94 | 20240801 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | E | 427 | R | 6 | 20221228 |
| EPI_ISL_19542245 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12073-P0/2024 | E | 427 | V | 11 | 20240930 |
| EPI_ISL_19139840 | NSP3 | hCoV-19/Uzbekistan/UZBRIV-329/2024 | E | 427 | G | 184 | 20240306 |
| EPI_ISL_18936185 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00165/2023 | E | 427 | Q | 59 | 20230422 |
| EPI_ISL_14749017 | NSP3 | hCoV-19/India/OR-ILSGS17519/2022 | E | 427 | I | 2 | 20220112 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | E | 427 | L | 3 | 20230217 |
| EPI_ISL_9418895 | NSP3 | hCoV-19/India/CG-ICMR-NIV-INSACOG-GSEQ-8465/2021 | E | 427 | S | 7 | 20211201 |
| EPI_ISL_19784578 | NSP3 | hCoV-19/Australia/QLD0x01531B/2025 | E | 427 | D | 144 | 20250223 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | E | 427 | del | 109 | 20240316 |
| EPI_ISL_11688631 | NSP3 | hCoV-19/England/BRBR-3C781DE/2022 | E | 427 | Z | 5 | 20220325 |
| EPI_ISL_19747017 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015775/2025 | E | 427 | K | 691 | 20250124 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 428 | S | 17 | 20240123 |
| EPI_ISL_10766177 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8706/2022 | T | 428 | P | 12 | 20220208 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | T | 428 | del | 102 | 20240316 |
| EPI_ISL_19817970 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U878-1/2025 | T | 428 | I | 20166 | 20250317 |
| EPI_ISL_18255099 | NSP3 | hCoV-19/Pakistan/PACP-B13-S01/2023 | T | 428 | L | 49 | 20230321 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | T | 428 | C | 407 | 20250107 |
| EPI_ISL_7345295 | NSP3 | hCoV-19/England/PHEC-3U081U4E/2021 | T | 428 | insC | 1 | 20211125 |
| EPI_ISL_18936185 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00165/2023 | T | 428 | R | 15 | 20230422 |
| EPI_ISL_19696143 | NSP3 | hCoV-19/Canada/SK-RRPL-764474/2025 | T | 428 | A | 154 | 20250106 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 428 | E | 3 | 20220210 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | T | 428 | K | 7 | 20230410 |
| EPI_ISL_19319121 | NSP3 | hCoV-19/USA/HI-H2330119/2024 | T | 428 | N | 96 | 20240621 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | T | 428 | V | 5 | 20230413 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | T | 428 | Q | 8 | 20230217 |
| EPI_ISL_16077949 | NSP3 | hCoV-19/Spain/AS-252293720/2022 | T | 428 | D | 2 | 20221121 |
| EPI_ISL_11936224 | NSP3 | hCoV-19/England/DHSC-CYDCSGZ/2021 | T | 428 | insANXXXX | 1 | 20211225 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | T | 428 | H | 2 | 20220210 |
| EPI_ISL_17122122 | NSP3 | hCoV-19/USA/VT-BSR-000244/2022 | K | 429 | M | 18 | 20221229 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | K | 429 | del | 85 | 20240316 |
| EPI_ISL_17500666 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13856/2023 | K | 429 | T | 37 | 20230329 |
| EPI_ISL_18255099 | NSP3 | hCoV-19/Pakistan/PACP-B13-S01/2023 | K | 429 | W | 1 | 20230321 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | K | 429 | E | 49 | 20230413 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | K | 429 | S | 54 | 20220124 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | K | 429 | insSSQKTCY | 2 | 20211104 |
| EPI_ISL_16013177 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-118213/2022 | K | 429 | H | 1 | 20221114 |
| EPI_ISL_19832653 | NSP3 | hCoV-19/Canada/BC-BCCDC-771167/2025 | K | 429 | R | 1945 | 20250301 |
| EPI_ISL_11507497 | NSP3 | hCoV-19/Turkey/HSGM-G7500/2022 | K | 429 | G | 2 | 20220311 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | K | 429 | insSPHRKLGY | 1 | 20210805 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 429 | stop | 8 | 20230101 |
| EPI_ISL_3178612 | NSP3 | hCoV-19/Wales/OXON-FA498C/2021 | K | 429 | insTCY | 2 | 20210715 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 429 | P | 3 | 20230410 |
| EPI_ISL_16354654 | NSP3 | hCoV-19/Brazil/SP-FMRP-1626/2021 | K | 429 | insHVHVLstop | 1 | 20210806 |
| EPI_ISL_9409244 | NSP3 | hCoV-19/Turkey/HSGM-F17672/2022 | K | 429 | insPSQKTCY | 2 | 20220112 |
| EPI_ISL_2004074 | NSP3 | hCoV-19/Kazakhstan/NRL-YUZ-232S/2021 | K | 429 | insQKTCY | 1 | 20210317 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | K | 429 | L | 2 | 20221228 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 429 | V | 5 | 20230116 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | K | 429 | Y | 403 | 20250107 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | K | 429 | D | 1 | 20230217 |
| EPI_ISL_16575556 | NSP3 | hCoV-19/Japan/22612/2021 | K | 429 | insKTCY | 1 | 20210421 |
| EPI_ISL_19487360 | NSP3 | hCoV-19/France/ARA-HCL024155775301/2024 | K | 429 | N | 2324 | 20241007 |
| EPI_ISL_15241836 | NSP3 | hCoV-19/USA/NJ-CDC-LC0893130/2022 | K | 429 | Q | 14 | 20220922 |
| EPI_ISL_1159907 | NSP3 | hCoV-19/USA/NC-CDC-LC0017601/2021 | K | 429 | insRLR | 4 | 20210216 |
| EPI_ISL_17500666 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13856/2023 | K | 429 | insCY | 2 | 20230329 |
| EPI_ISL_5339759 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-50359/2021 | F | 430 | R | 1 | 20210717 |
| EPI_ISL_19826603 | NSP3 | hCoV-19/USA/NY-PRL-250408_81H06/2025 | F | 430 | V | 25 | 20250331 |
| EPI_ISL_11861675 | NSP3 | hCoV-19/Israel/ICH-741208297/2022 | F | 430 | A | 2 | 20220317 |
| EPI_ISL_17628541 | NSP3 | hCoV-19/Russia/MOW-CRIE-7793006312/2022 | F | 430 | Y | 12 | 20221127 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | F | 430 | W | 1 | 20220210 |
| EPI_ISL_18737962 | NSP3 | hCoV-19/USA/MI-MDHHS-SC44926/2023 | F | 430 | I | 15 | 20231215 |
| EPI_ISL_19320705 | NSP3 | hCoV-19/USA/NE-NM_L380026179/2024 | F | 430 | L | 211 | 20240803 |
| EPI_ISL_19741302 | NSP3 | hCoV-19/USA/CO-CDPHE-42973022/2025 | F | 430 | S | 1655 | 20250209 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | F | 430 | E | 3 | 20230413 |
| EPI_ISL_4348475 | NSP3 | hCoV-19/Thailand/ChaiNat_SEQ16162/2021 | F | 430 | G | 2 | 20210907 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | F | 430 | T | 5 | 20221222 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | F | 430 | del | 76 | 20240316 |
| EPI_ISL_19731961 | NSP3 | hCoV-19/Spain/CT-HUGTiP-D2R204/2024 | F | 430 | C | 57 | 20240809 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | F | 430 | M | 4 | 20211228 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | F | 430 | H | 2 | 20220112 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | F | 430 | Q | 1 | 20210701 |
| EPI_ISL_5342007 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-53026/2021 | F | 430 | stop | 1 | 20210803 |
| EPI_ISL_17585751 | NSP3 | hCoV-19/Egypt/ARMY-CU154/2022 | F | 430 | P | 4 | 20221112 |
| EPI_ISL_10943764 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8063/2022 | F | 430 | K | 4 | 20220203 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | L | 431 | del | 70 | 20240316 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | L | 431 | W | 1 | 20230217 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | L | 431 | T | 4 | 20211014 |
| EPI_ISL_9543862 | NSP3 | hCoV-19/USA/CA-HLX-STM-0006233-C09/2021 | L | 431 | insMGAR | 1 | 20210726 |
| EPI_ISL_5339759 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-50359/2021 | L | 431 | stop | 1 | 20210717 |
| EPI_ISL_18829521 | NSP3 | hCoV-19/Brazil/SP-FIOCRUZ-14060/2023 | L | 431 | P | 193 | 20231026 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 431 | Q | 2 | 20220210 |
| EPI_ISL_19829419 | NSP3 | hCoV-19/USA/LA-CDC-2-8366142/2025 | L | 431 | R | 441 | 20250214 |
| EPI_ISL_19412065 | NSP3 | hCoV-19/Canada/AB-ABPHL-122452/2024 | L | 431 | H | 100 | 20240829 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 431 | N | 1 | 20210318 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | L | 431 | S | 51 | 20221228 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | L | 431 | M | 1 | 20210525 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | L | 431 | I | 801 | 20250107 |
| EPI_ISL_19828177 | NSP3 | hCoV-19/Australia/QLD0x0154CF/2025 | L | 431 | F | 3459 | 20250401 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | L | 431 | E | 1 | 20230217 |
| EPI_ISL_16665488 | NSP3 | hCoV-19/USA/NY-CDC-LC0987017/2023 | L | 431 | J | 14 | 20230108 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 431 | G | 2 | 20220210 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | L | 431 | Y | 1 | 20211019 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | L | 431 | K | 11 | 20230217 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | L | 431 | insRN | 1 | 20211228 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | L | 431 | D | 2 | 20230116 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | L | 431 | V | 25 | 20230413 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | L | 431 | C | 1 | 20220124 |
| EPI_ISL_10924464 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11805/2022 | T | 432 | Q | 48 | 20220228 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 432 | F | 1 | 20220210 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 432 | H | 5 | 20230101 |
| EPI_ISL_10895131 | NSP3 | hCoV-19/USA/GA-CDC-MMB14234611/2022 | T | 432 | insALAS | 1 | 20220208 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | T | 432 | stop | 2 | 20220124 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 432 | N | 2 | 20210424 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 432 | G | 1 | 20230116 |
| EPI_ISL_19663727 | NSP3 | hCoV-19/Canada/ON-PHL-202500429/2024 | T | 432 | I | 930 | 20241230 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | T | 432 | insstopstop | 3 | 20211014 |
| EPI_ISL_11230201 | NSP3 | hCoV-19/Austria/CeMM20627/2021 | T | 432 | D | 2 | 20211119 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | T | 432 | V | 2 | 20230217 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | T | 432 | M | 1 | 20200807 |
| EPI_ISL_897615 | NSP3 | hCoV-19/Switzerland/GE-32990906/2021 | T | 432 | insL | 1 | 20210117 |
| EPI_ISL_10943894 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8382/2022 | T | 432 | Y | 1 | 20220206 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | T | 432 | C | 1 | 20230413 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | T | 432 | L | 420 | 20250107 |
| EPI_ISL_14642625 | NSP3 | hCoV-19/Australia/VIC68955/2022 | T | 432 | K | 7 | 20220815 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | T | 432 | del | 61 | 20240316 |
| EPI_ISL_12999306 | NSP3 | hCoV-19/Russia/MOW-CRIE-7733915177/2022 | T | 432 | P | 5 | 20220227 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | T | 432 | E | 5 | 20221222 |
| EPI_ISL_19687951 | NSP3 | hCoV-19/Slovenia/IMI-V0-31/2025 | T | 432 | A | 428 | 20250102 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | T | 432 | S | 11 | 20221228 |
| EPI_ISL_17585751 | NSP3 | hCoV-19/Egypt/ARMY-CU154/2022 | T | 432 | R | 9 | 20221112 |
| EPI_ISL_15104818 | NSP3 | hCoV-19/Venezuela/Dtt429/2021 | T | 432 | insDFAAYSRYRIGHYKFLT | 1 | 20210406 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | E | 433 | T | 429 | 20250107 |
| EPI_ISL_19540870 | NSP3 | hCoV-19/Mexico/NLE_IBT_IMSS_12849/2024 | E | 433 | A | 91 | 20240228 |
| EPI_ISL_19533562 | NSP3 | hCoV-19/USA/CO-CDPHE-42383362/2024 | E | 433 | G | 383 | 20240930 |
| EPI_ISL_11538723 | NSP3 | hCoV-19/USA/CO-CDPHE-2103042568/2022 | E | 433 | L | 4 | 20220111 |
| EPI_ISL_19785622 | NSP3 | hCoV-19/Brazil/DF-LACENDF-530151830/2025 | E | 433 | Q | 120 | 20250204 |
| EPI_ISL_19176439 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000148701/2024 | E | 433 | V | 8 | 20240510 |
| EPI_ISL_11861675 | NSP3 | hCoV-19/Israel/ICH-741208297/2022 | E | 433 | S | 3 | 20220317 |
| EPI_ISL_8525735 | NSP3 | hCoV-19/Senegal/54769/2020 | E | 433 | stop | 1 | 20200606 |
| EPI_ISL_19799718 | NSP3 | hCoV-19/USA/TX-HMH-M-147700/2025 | E | 433 | K | 671 | 20250227 |
| EPI_ISL_13346774 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2369/2022 | E | 433 | Y | 2 | 20220604 |
| EPI_ISL_10924464 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11805/2022 | E | 433 | P | 2 | 20220228 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | E | 433 | N | 2 | 20230217 |
| EPI_ISL_18546864 | NSP3 | hCoV-19/USA/TX-HMH-M-135445/2023 | E | 433 | Z | 3 | 20231109 |
| EPI_ISL_16733919 | NSP3 | hCoV-19/USA/CA-CDPH-FS48101142/2022 | E | 433 | D | 45 | 20221216 |
| EPI_ISL_5342007 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-53026/2021 | E | 433 | H | 1 | 20210803 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | E | 433 | I | 4 | 20230217 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 433 | R | 8 | 20230101 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | E | 433 | del | 57 | 20240316 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | N | 434 | G | 12 | 20230217 |
| EPI_ISL_10924499 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11812/2022 | N | 434 | D | 8 | 20220228 |
| EPI_ISL_19422145 | NSP3 | hCoV-19/Spain/MD-HULP-200296430/2024 | N | 434 | H | 52 | 20240904 |
| EPI_ISL_11230201 | NSP3 | hCoV-19/Austria/CeMM20627/2021 | N | 434 | R | 2 | 20211119 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | N | 434 | del | 42 | 20240201 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | N | 434 | I | 6 | 20230116 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | N | 434 | S | 51 | 20230217 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | N | 434 | A | 1 | 20220210 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | N | 434 | Q | 1 | 20210106 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | N | 434 | T | 73 | 20230217 |
| EPI_ISL_13848002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-14629/2022 | N | 434 | Y | 3 | 20220619 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 434 | V | 1 | 20210318 |
| EPI_ISL_19656833 | NSP3 | hCoV-19/Germany/BW-RKI-I-1146927/2024 | N | 434 | K | 285 | 20241118 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | N | 434 | L | 429 | 20250107 |
| EPI_ISL_18346013 | NSP3 | hCoV-19/env/Ukraine/79993/2023 | N | 434 | insXX | 1 | 20230629 |
| EPI_ISL_2665612 | NSP3 | hCoV-19/Denmark/DCGC-111065/2021 | N | 434 | B | 2 | 20210614 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | N | 434 | stop | 1 | 20210525 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | L | 435 | M | 421 | 20250107 |
| EPI_ISL_19731976 | NSP3 | hCoV-19/Brazil/AL-LACENAL-270291222/2025 | L | 435 | F | 61 | 20250119 |
| EPI_ISL_12582761 | NSP3 | hCoV-19/Turkey/HSGM-GS2189/2022 | L | 435 | W | 1 | 20220410 |
| EPI_ISL_4395433 | NSP3 | hCoV-19/Poland/77657/2021 | L | 435 | C | 6 | 20210909 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | L | 435 | Y | 3 | 20230116 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | L | 435 | R | 1 | 20220210 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 435 | P | 2 | 20220210 |
| EPI_ISL_16281372 | NSP3 | hCoV-19/England/PHEC-YY81OI3/2022 | L | 435 | S | 32 | 20221205 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | L | 435 | Q | 5 | 20211014 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | L | 435 | T | 4 | 20221228 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | L | 435 | stop | 2 | 20210803 |
| EPI_ISL_11230201 | NSP3 | hCoV-19/Austria/CeMM20627/2021 | L | 435 | A | 1 | 20211119 |
| EPI_ISL_18098349 | NSP3 | hCoV-19/Kenya/KNPHLGEN125/2022 | L | 435 | insXHFI | 1 | 20221223 |
| EPI_ISL_19640726 | NSP3 | hCoV-19/Canada/SK-RRPL-757576/2024 | L | 435 | V | 117 | 20241204 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | L | 435 | I | 13 | 20230413 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | L | 435 | K | 8 | 20221222 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | L | 435 | del | 41 | 20240201 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | L | 436 | A | 420 | 20250107 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | L | 436 | insP | 1 | 20200805 |
| EPI_ISL_18057350 | NSP3 | hCoV-19/USA/TX-HMH-M-130236/2023 | L | 436 | T | 59 | 20230717 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 436 | F | 14 | 20230217 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | L | 436 | insA | 1 | 20210802 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | L | 436 | Y | 16 | 20231218 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | L | 436 | G | 1 | 20210424 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | L | 436 | C | 13 | 20230217 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | L | 436 | H | 1 | 20210803 |
| EPI_ISL_19643376 | NSP3 | hCoV-19/USA/TX-HMH-M-146902/2024 | L | 436 | V | 28 | 20241110 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | L | 436 | del | 43 | 20240201 |
| EPI_ISL_18436053 | NSP3 | hCoV-19/Italy/LOM-69495577/2023 | L | 436 | I | 3 | 20231019 |
| EPI_ISL_19365923 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-144493/2024 | L | 436 | S | 16 | 20240805 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | L | 436 | Q | 9 | 20230217 |
| EPI_ISL_19643376 | NSP3 | hCoV-19/USA/TX-HMH-M-146902/2024 | L | 436 | insT | 24 | 20241110 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | L | 436 | N | 1 | 20210526 |
| EPI_ISL_14901069 | NSP3 | hCoV-19/Mexico/SIN_CIAD-MZT_S8982/2022 | L | 436 | J | 2 | 20220811 |
| EPI_ISL_17174612 | NSP3 | hCoV-19/Germany/NW-RKI-I-1114840/2023 | L | 436 | stop | 4 | 20230224 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | L | 436 | K | 3 | 20230413 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | L | 436 | P | 1 | 20230116 |
| EPI_ISL_14436185 | NSP3 | hCoV-19/USA/TX-HMH-110489/2022 | L | 437 | P | 11 | 20220801 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | L | 437 | K | 1 | 20230413 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | L | 437 | D | 1 | 20210526 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | L | 437 | A | 5 | 20230116 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | L | 437 | insCstopRS | 4 | 20211014 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 437 | T | 10 | 20230217 |
| EPI_ISL_6648062 | NSP3 | hCoV-19/USA/TX-CDC-ASC210311413/2021 | L | 437 | V | 4 | 20211003 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | L | 437 | I | 529 | 20250107 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 437 | S | 1 | 20210318 |
| EPI_ISL_18483615 | NSP3 | hCoV-19/Chile/NB-81506/2023 | L | 437 | J | 7 | 20231020 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | L | 437 | stop | 1 | 20210803 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | L | 437 | G | 4 | 20230217 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | L | 437 | del | 53 | 20240201 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | L | 437 | C | 2 | 20220630 |
| EPI_ISL_4298281 | NSP3 | hCoV-19/USA/NY-CII-SBA-021/2021 | L | 437 | M | 1 | 20210413 |
| EPI_ISL_18981237 | NSP3 | hCoV-19/USA/TX-HMH-M-139560/2024 | L | 437 | F | 62 | 20240213 |
| EPI_ISL_14443150 | NSP3 | hCoV-19/India/OR-ILSGS18738/2022 | L | 437 | Q | 1 | 20220729 |
| EPI_ISL_12582761 | NSP3 | hCoV-19/Turkey/HSGM-GS2189/2022 | L | 437 | R | 2 | 20220410 |
| EPI_ISL_4440099 | NSP3 | hCoV-19/Ukraine/67-62555/2021 | L | 437 | Y | 2 | 20210614 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | Y | 438 | insstopRstop | 1 | 20210804 |
| EPI_ISL_11887731 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0693/2021 | Y | 438 | stop | 6 | 20211228 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | Y | 438 | F | 426 | 20250107 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | Y | 438 | I | 16 | 20230217 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | Y | 438 | D | 2 | 20230413 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 438 | R | 1 | 20210318 |
| EPI_ISL_17616416 | NSP3 | hCoV-19/Ethiopia/CO_GX_033/2022 | Y | 438 | H | 5 | 20220622 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | Y | 438 | T | 3 | 20230217 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | Y | 438 | A | 10 | 20231218 |
| EPI_ISL_18098349 | NSP3 | hCoV-19/Kenya/KNPHLGEN125/2022 | Y | 438 | L | 7 | 20221223 |
| EPI_ISL_14443150 | NSP3 | hCoV-19/India/OR-ILSGS18738/2022 | Y | 438 | W | 3 | 20220729 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 438 | E | 1 | 20211006 |
| EPI_ISL_12582761 | NSP3 | hCoV-19/Turkey/HSGM-GS2189/2022 | Y | 438 | C | 3 | 20220410 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 438 | Q | 1 | 20220210 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Y | 438 | G | 2 | 20220210 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | Y | 438 | del | 58 | 20240201 |
| EPI_ISL_12955834 | NSP3 | hCoV-19/Russia/LIP-CRIE-7734003635/2022 | Y | 438 | S | 5 | 20220228 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | I | 439 | Q | 1 | 20210803 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | I | 439 | del | 86 | 20240201 |
| EPI_ISL_17128101 | NSP3 | hCoV-19/USA/MI-CDC-QDX46678988/2023 | I | 439 | M | 33 | 20230211 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | I | 439 | W | 2 | 20210804 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | I | 439 | F | 4 | 20220630 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | I | 439 | V | 1573 | 20231218 |
| EPI_ISL_9365608 | NSP3 | hCoV-19/Denmark/DCGC-341572/2022 | I | 439 | A | 3 | 20220125 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 439 | Y | 1 | 20220210 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | I | 439 | K | 2 | 20230116 |
| EPI_ISL_12694400 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471731/2022 | I | 439 | stop | 8 | 20220126 |
| EPI_ISL_4053005 | NSP3 | hCoV-19/USA/NY-MVL048211671/2021 | I | 439 | J | 1 | 20210217 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | I | 439 | P | 1 | 20210526 |
| EPI_ISL_16477886 | NSP3 | hCoV-19/Slovenia/23-066084-MB/2022 | I | 439 | T | 55 | 20221215 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | I | 439 | L | 58 | 20240627 |
| EPI_ISL_11354940 | NSP3 | hCoV-19/France/GES-ChNa-990000083221/2021 | I | 439 | H | 1 | 20210725 |
| EPI_ISL_18029336 | NSP3 | hCoV-19/Russia/MOW-CSP-LQ-24691_S15/2022 | I | 439 | S | 83 | 20220326 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | I | 439 | D | 1 | 20230413 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 439 | R | 1 | 20210318 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | I | 439 | N | 6 | 20220124 |
| EPI_ISL_3391949 | NSP3 | hCoV-19/France/BFC-HMN-21072220369/2021 | I | 439 | G | 1 | 20210712 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | D | 440 | del | 101 | 20240201 |
| EPI_ISL_19814294 | NSP3 | hCoV-19/Luxembourg/LNS4151687/2025 | D | 440 | Q | 419 | 20250107 |
| EPI_ISL_13590299 | NSP3 | hCoV-19/USA/CA-Curative-411463/2022 | D | 440 | V | 3 | 20220619 |
| EPI_ISL_18355160 | NSP3 | hCoV-19/Singapore/R69MR42/2023 | D | 440 | B | 5 | 20230921 |
| EPI_ISL_12494593 | NSP3 | hCoV-19/India/KA-SLS-34056/2022 | D | 440 | Y | 7 | 20220119 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | D | 440 | C | 2 | 20220210 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | D | 440 | K | 7 | 20230217 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | D | 440 | R | 1 | 20200803 |
| EPI_ISL_18927992 | NSP3 | hCoV-19/USA/TX-HMH-M-138764/2024 | D | 440 | E | 22 | 20240129 |
| EPI_ISL_15432133 | NSP3 | hCoV-19/England/PHEC-YY8DJBE/2022 | D | 440 | H | 2 | 20221002 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | D | 440 | N | 34 | 20230413 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | D | 440 | insV | 1 | 20210801 |
| EPI_ISL_12582754 | NSP3 | hCoV-19/Turkey/HSGM-GS1971/2022 | D | 440 | A | 5 | 20220401 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | D | 440 | I | 1 | 20220630 |
| EPI_ISL_3588754 | NSP3 | hCoV-19/USA/ID-IBL-746258/2021 | D | 440 | insstop | 1 | 20210801 |
| EPI_ISL_19562568 | NSP3 | hCoV-19/env/Germany/BY-LGL-6405424/2024 | D | 440 | T | 21 | 20241104 |
| EPI_ISL_14440949 | NSP3 | hCoV-19/India/TN-ICMR-NIRT-INSACOG-W5/2022 | D | 440 | S | 3 | 20220201 |
| EPI_ISL_12582761 | NSP3 | hCoV-19/Turkey/HSGM-GS2189/2022 | D | 440 | G | 15 | 20220410 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | D | 440 | L | 3 | 20220205 |
| EPI_ISL_13574343 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2570/2022 | I | 441 | N | 4 | 20220609 |
| EPI_ISL_18936222 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00074/2023 | I | 441 | stop | 5 | 20230413 |
| EPI_ISL_18362476 | NSP3 | hCoV-19/Spain/HUNSC_ITER_402038900/2023 | I | 441 | M | 6 | 20230803 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | I | 441 | E | 3 | 20211006 |
| EPI_ISL_19562568 | NSP3 | hCoV-19/env/Germany/BY-LGL-6405424/2024 | I | 441 | L | 403 | 20241104 |
| EPI_ISL_19485017 | NSP3 | hCoV-19/Slovenia/IMI-V1-11346/2024 | I | 441 | V | 2543 | 20241005 |
| EPI_ISL_19519886 | NSP3 | hCoV-19/Canada/BC-BCCDC-742146/2024 | I | 441 | S | 427 | 20241004 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 441 | D | 1 | 20220210 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | I | 441 | del | 94 | 20240201 |
| EPI_ISL_18987515 | NSP3 | hCoV-19/France/CVL-ChuTo-9800123807/2024 | I | 441 | K | 3 | 20240214 |
| EPI_ISL_10138351 | NSP3 | hCoV-19/Thailand/NIC_BKK_SEQ4858/2022 | I | 441 | G | 2 | 20220117 |
| EPI_ISL_13282064 | NSP3 | hCoV-19/USA/ID-IBL-656337/2020 | I | 441 | C | 1 | 20200915 |
| EPI_ISL_19829607 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022770_01/2025 | I | 441 | T | 404 | 20250304 |
| EPI_ISL_11829711 | NSP3 | hCoV-19/England/PHEC-YYD4GZU/2022 | I | 441 | J | 4 | 20220324 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | I | 441 | F | 25 | 20231218 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | N | 442 | W | 2 | 20210813 |
| EPI_ISL_10594341 | NSP3 | hCoV-19/France/ARA-HMN-22012280562/2022 | N | 442 | V | 2 | 20220103 |
| EPI_ISL_13282093 | NSP3 | hCoV-19/USA/ID-IBL-656311/2020 | N | 442 | C | 2 | 20200914 |
| EPI_ISL_3003319 | NSP3 | hCoV-19/England/OXON-F8AD17/2020 | N | 442 | insQL | 1 | 20201017 |
| EPI_ISL_19240069 | NSP3 | hCoV-19/France/ARA-HCL724000238301/2024 | N | 442 | D | 107 | 20240601 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | N | 442 | del | 111 | 20240201 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | N | 442 | G | 5 | 20220124 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 442 | Y | 12 | 20230101 |
| EPI_ISL_16919627 | NSP3 | hCoV-19/USA/TX-HMH-M-124970/2023 | N | 442 | H | 6 | 20230203 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | N | 442 | A | 1 | 20220205 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | N | 442 | R | 1 | 20210526 |
| EPI_ISL_19409822 | NSP3 | hCoV-19/France/PAC-HCL724000405501/2024 | N | 442 | K | 107 | 20240819 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 442 | E | 2 | 20220210 |
| EPI_ISL_14822941 | NSP3 | hCoV-19/Denmark/DCGC-572998/2022 | N | 442 | B | 6 | 20220830 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | N | 442 | L | 92 | 20230401 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | N | 442 | P | 13 | 20230217 |
| EPI_ISL_4395433 | NSP3 | hCoV-19/Poland/77657/2021 | N | 442 | M | 6 | 20210909 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | N | 442 | F | 4 | 20230116 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | N | 442 | T | 65 | 20230217 |
| EPI_ISL_9973650 | NSP3 | hCoV-19/France/BFC-HMN-22012250148/2022 | N | 442 | I | 16 | 20220117 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | N | 442 | Q | 8 | 20230217 |
| EPI_ISL_19812369 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147931/2025 | N | 442 | S | 453 | 20250307 |
| EPI_ISL_16408330 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1119/2022 | N | 442 | stop | 3 | 20221228 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | G | 443 | T | 3 | 20230116 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | G | 443 | stop | 47 | 20230401 |
| EPI_ISL_16741178 | NSP3 | hCoV-19/India/TN-CORES_24780/2022 | G | 443 | E | 2 | 20220103 |
| EPI_ISL_9822858 | NSP3 | hCoV-19/England/MILK-35B3CA0/2022 | G | 443 | C | 6 | 20220207 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | G | 443 | N | 1 | 20210424 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 443 | W | 2 | 20230108 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | G | 443 | H | 4 | 20220210 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | G | 443 | Q | 3 | 20210813 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | G | 443 | del | 67 | 20240201 |
| EPI_ISL_11948188 | NSP3 | hCoV-19/England/DHSC-CYNUN3S/2022 | G | 443 | A | 10 | 20220116 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | G | 443 | L | 1 | 20210526 |
| EPI_ISL_15293844 | NSP3 | hCoV-19/India/MH-NCCS-2712210345/2021 | G | 443 | insPCstopstop | 4 | 20211226 |
| EPI_ISL_12999299 | NSP3 | hCoV-19/Russia/MOW-CRIE-7733901970/2022 | G | 443 | S | 18 | 20220226 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | G | 443 | I | 4 | 20230217 |
| EPI_ISL_10397183 | NSP3 | hCoV-19/Turkey/HSGM-G1459/2022 | G | 443 | R | 9 | 20220214 |
| EPI_ISL_19335477 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143387/2024 | G | 443 | D | 13 | 20240724 |
| EPI_ISL_13307934 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2190/2022 | G | 443 | Y | 1 | 20220527 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | G | 443 | K | 11 | 20231218 |
| EPI_ISL_19042030 | NSP3 | hCoV-19/Lithuania/MB231129_0258/2023 | G | 443 | V | 10 | 20231128 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | G | 443 | P | 95 | 20230401 |
| EPI_ISL_18915871 | NSP3 | hCoV-19/USA/CO-CDPHE-41673415/2024 | N | 444 | H | 81 | 20240106 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | N | 444 | L | 84 | 20230401 |
| EPI_ISL_16741178 | NSP3 | hCoV-19/India/TN-CORES_24780/2022 | N | 444 | W | 1 | 20220103 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | N | 444 | P | 1 | 20220506 |
| EPI_ISL_18436053 | NSP3 | hCoV-19/Italy/LOM-69495577/2023 | N | 444 | I | 119 | 20231019 |
| EPI_ISL_17417888 | NSP3 | hCoV-19/Thailand/NIC_PNB_1020/2023 | N | 444 | F | 3 | 20230109 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | N | 444 | stop | 1 | 20220210 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | N | 444 | Q | 10 | 20230217 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | N | 444 | G | 2 | 20220210 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | N | 444 | A | 1 | 20210526 |
| EPI_ISL_19685792 | NSP3 | hCoV-19/Ireland/D-SVUH-FAZ12591-029/2024 | N | 444 | S | 602 | 20241216 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | N | 444 | E | 2 | 20210803 |
| EPI_ISL_17370582 | NSP3 | hCoV-19/Thailand/NIC_NMA_1012/2023 | N | 444 | B | 6 | 20230310 |
| EPI_ISL_19691340 | NSP3 | hCoV-19/Canada/ON-PHL-202501597/2025 | N | 444 | T | 389 | 20250110 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | N | 444 | C | 2 | 20230217 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | N | 444 | M | 1 | 20210801 |
| EPI_ISL_12067825 | NSP3 | hCoV-19/England/LSPA-3D2D22F/2022 | N | 444 | Y | 85 | 20220406 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | N | 444 | insstopV | 3 | 20220124 |
| EPI_ISL_19672177 | NSP3 | hCoV-19/France/ARA-HCL124045123901/2024 | N | 444 | K | 102 | 20241227 |
| EPI_ISL_19781261 | NSP3 | hCoV-19/Italy/VEN-IZSVe-25RS8004-2_VI/2025 | N | 444 | D | 207 | 20250207 |
| EPI_ISL_13718881 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2744/2022 | N | 444 | V | 1 | 20220619 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | N | 444 | del | 68 | 20240201 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 445 | Q | 3 | 20220210 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 445 | Y | 1 | 20220210 |
| EPI_ISL_18451641 | NSP3 | hCoV-19/Sweden/AC-460548705118/2023 | L | 445 | F | 8 | 20231019 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | L | 445 | A | 1 | 20220506 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | L | 445 | insLstopstopHstop | 1 | 20210730 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | L | 445 | V | 36 | 20230217 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | L | 445 | del | 50 | 20240201 |
| EPI_ISL_18777614 | NSP3 | hCoV-19/Spain/CL-COV45405/2023 | L | 445 | H | 2 | 20231203 |
| EPI_ISL_13718881 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2744/2022 | L | 445 | S | 6 | 20220619 |
| EPI_ISL_19775324 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147870/2025 | L | 445 | I | 155 | 20250219 |
| EPI_ISL_8806488 | NSP3 | hCoV-19/India/MH-NCCS-2748700580210/2021 | L | 445 | insstopstopHstopH | 3 | 20210826 |
| EPI_ISL_19352660 | NSP3 | hCoV-19/South Korea/KDCA294463/2024 | L | 445 | P | 66 | 20240728 |
| EPI_ISL_17681845 | NSP3 | hCoV-19/USA/CA-CDPH-7000025300/2023 | L | 445 | J | 53 | 20230211 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | L | 445 | stop | 54 | 20230401 |
| EPI_ISL_6937454 | NSP3 | hCoV-19/USA/WY-WYPHL-21109272/2021 | L | 445 | C | 5 | 20211011 |
| EPI_ISL_1415154 | NSP3 | hCoV-19/India/MH-NCCS-77867/2020 | L | 445 | W | 1 | 20200917 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | L | 445 | D | 2 | 20230116 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | L | 445 | K | 1 | 20210526 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | L | 445 | T | 3 | 20210701 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | H | 446 | M | 1 | 20210313 |
| EPI_ISL_17417888 | NSP3 | hCoV-19/Thailand/NIC_PNB_1020/2023 | H | 446 | L | 3 | 20230109 |
| EPI_ISL_10858419 | NSP3 | hCoV-19/Turkey/HSGM-G2218/2022 | H | 446 | R | 2 | 20220217 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | H | 446 | I | 4 | 20230116 |
| EPI_ISL_8507348 | NSP3 | hCoV-19/USA/NC-ECU-111109166/2021 | H | 446 | V | 3 | 20211210 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | H | 446 | insC | 1 | 20210812 |
| EPI_ISL_3588754 | NSP3 | hCoV-19/USA/ID-IBL-746258/2021 | H | 446 | A | 2 | 20210801 |
| EPI_ISL_8803773 | NSP3 | hCoV-19/India/MH-NCCS-2749001803557/2021 | H | 446 | F | 3 | 20210812 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | H | 446 | del | 130 | 20240201 |
| EPI_ISL_16744874 | NSP3 | hCoV-19/Chile/RM-1120/2023 | H | 446 | K | 1 | 20230105 |
| EPI_ISL_14440995 | NSP3 | hCoV-19/India/TN-ICMR-NIRT-INSACOG-W72/2022 | H | 446 | stop | 1 | 20220202 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | H | 446 | T | 1 | 20210318 |
| EPI_ISL_8197979 | NSP3 | hCoV-19/India/MH-RFIP05913/2021 | H | 446 | C | 1 | 20211111 |
| EPI_ISL_19821559 | NSP3 | hCoV-19/Honduras/CR-340/2024 | H | 446 | D | 6 | 20241208 |
| EPI_ISL_16741178 | NSP3 | hCoV-19/India/TN-CORES_24780/2022 | H | 446 | N | 6 | 20220103 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | H | 446 | E | 8 | 20230217 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | H | 446 | W | 48 | 20230401 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | H | 446 | S | 5 | 20230217 |
| EPI_ISL_19349012 | NSP3 | hCoV-19/USA/TX-HMH-M-143606/2024 | H | 446 | Y | 576 | 20240726 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | H | 446 | G | 1 | 20211006 |
| EPI_ISL_12694400 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471731/2022 | H | 446 | insstopW | 5 | 20220126 |
| EPI_ISL_19443634 | NSP3 | hCoV-19/South Korea/KDCA295740/2024 | H | 446 | Q | 23 | 20240830 |
| EPI_ISL_15293843 | NSP3 | hCoV-19/India/MH-NCCS-2112210120/2021 | H | 446 | P | 4 | 20211226 |
| EPI_ISL_14025904 | NSP3 | hCoV-19/Ireland/D-NVRL-S22IRL00370378/2022 | P | 447 | A | 5 | 20220622 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | P | 447 | V | 1 | 20210424 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | P | 447 | insHRKLVTLYstopHstopW | 2 | 20211014 |
| EPI_ISL_19286355 | NSP3 | hCoV-19/USA/TX-HMH-M-141897/2024 | P | 447 | Q | 81 | 20240626 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | P | 447 | G | 1 | 20230420 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 447 | C | 1 | 20210318 |
| EPI_ISL_16744874 | NSP3 | hCoV-19/Chile/RM-1120/2023 | P | 447 | K | 3 | 20230105 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 447 | Y | 1 | 20220210 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | P | 447 | stop | 2 | 20220630 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | P | 447 | M | 7 | 20230217 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | P | 447 | del | 150 | 20240201 |
| EPI_ISL_13995873 | NSP3 | hCoV-19/env/USA/CA-SEARCH-90474/2022 | P | 447 | T | 25 | 20220502 |
| EPI_ISL_17711224 | NSP3 | hCoV-19/India/UP-MRU-ICMR-58/2023 | P | 447 | I | 8 | 20230424 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | P | 447 | D | 12 | 20231218 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | P | 447 | R | 7 | 20220124 |
| EPI_ISL_19262979 | NSP3 | hCoV-19/USA/CT-Yale-26038/2024 | P | 447 | L | 411 | 20240609 |
| EPI_ISL_19691229 | NSP3 | hCoV-19/France/GES-RELAB-IPP00216/2025 | P | 447 | S | 1094 | 20250104 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | P | 447 | insVCV | 1 | 20210313 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | P | 447 | E | 3 | 20230217 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | D | 448 | S | 55 | 20230401 |
| EPI_ISL_15787569 | NSP3 | hCoV-19/Denmark/DCGC-610836/2022 | D | 448 | G | 9 | 20221109 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | D | 448 | E | 16 | 20230217 |
| EPI_ISL_8806464 | NSP3 | hCoV-19/India/MH-NCCS-2749001909933/2021 | D | 448 | R | 1 | 20210830 |
| EPI_ISL_17241331 | NSP3 | hCoV-19/Netherlands/NH-AUMC-000979/2023 | D | 448 | N | 13 | 20230309 |
| EPI_ISL_17711224 | NSP3 | hCoV-19/India/UP-MRU-ICMR-58/2023 | D | 448 | Q | 6 | 20230424 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | D | 448 | L | 4 | 20220205 |
| EPI_ISL_17052480 | NSP3 | hCoV-19/USA/TX-UTEP-B002526998/2022 | D | 448 | Y | 3 | 20220725 |
| EPI_ISL_11975555 | NSP3 | hCoV-19/USA/CA-CDPH-2000062968/2022 | D | 448 | B | 2 | 20220219 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | D | 448 | K | 21 | 20231218 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | D | 448 | W | 2 | 20220630 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | D | 448 | M | 1 | 20210526 |
| EPI_ISL_2223768 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-40585/2020 | D | 448 | A | 1 | 20200729 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | D | 448 | F | 4 | 20220720 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | D | 448 | del | 153 | 20240201 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | D | 448 | I | 8 | 20230420 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | D | 448 | V | 1 | 20230217 |
| EPI_ISL_17711224 | NSP3 | hCoV-19/India/UP-MRU-ICMR-58/2023 | S | 449 | I | 9 | 20230424 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | S | 449 | Q | 1 | 20220630 |
| EPI_ISL_8803775 | NSP3 | hCoV-19/India/MH-NCCS-2749001805017/2021 | S | 449 | M | 1 | 20210812 |
| EPI_ISL_11024235 | NSP3 | hCoV-19/Brazil/PR-NVBS12634GENOV045397342135/2022 | S | 449 | insQSLF | 1 | 20220106 |
| EPI_ISL_10167370 | NSP3 | hCoV-19/Northern Ireland/NIRE-0157a7/2021 | S | 449 | C | 3 | 20211114 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | S | 449 | A | 10 | 20230217 |
| EPI_ISL_10080728 | NSP3 | hCoV-19/India/KA-SEQ_9907_S233_R1_001/2022 | S | 449 | stop | 1 | 20220101 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | S | 449 | E | 4 | 20220210 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | S | 449 | N | 6 | 20230217 |
| EPI_ISL_18356473 | NSP3 | hCoV-19/Spain/PV-HUD-35176994/2023 | S | 449 | L | 24 | 20230924 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | S | 449 | del | 149 | 20240201 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | S | 449 | R | 2 | 20220720 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | S | 449 | V | 3 | 20230116 |
| EPI_ISL_14496389 | NSP3 | hCoV-19/Israel/SMC-7099927/2022 | S | 449 | P | 4 | 20220808 |
| EPI_ISL_11793235 | NSP3 | hCoV-19/USA/NE-CUMC_22087029/2022 | S | 449 | insTILL | 1 | 20220325 |
| EPI_ISL_12836560 | NSP3 | hCoV-19/env/USA/CA-SEARCH-87180/2022 | S | 449 | Y | 4 | 20220406 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | S | 449 | T | 9 | 20221222 |
| EPI_ISL_18928188 | NSP3 | hCoV-19/USA/TX-HMH-M-138963/2024 | S | 449 | F | 33 | 20240203 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 450 | R | 2 | 20210318 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | A | 450 | Y | 2 | 20230217 |
| EPI_ISL_2650074 | NSP3 | hCoV-19/USA/AZ-ASPHL-1466/2020 | A | 450 | insLV | 1 | 20200625 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | A | 450 | E | 6 | 20221222 |
| EPI_ISL_16969705 | NSP3 | hCoV-19/Norway/36053/2022 | A | 450 | G | 8 | 20221206 |
| EPI_ISL_12932949 | NSP3 | hCoV-19/Australia/NSW-ICPMR-26060/2022 | A | 450 | D | 66 | 20220518 |
| EPI_ISL_8806464 | NSP3 | hCoV-19/India/MH-NCCS-2749001909933/2021 | A | 450 | C | 2 | 20210830 |
| EPI_ISL_19770261 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YMINK/2025 | A | 450 | T | 1213 | 20250220 |
| EPI_ISL_17711224 | NSP3 | hCoV-19/India/UP-MRU-ICMR-58/2023 | A | 450 | L | 12 | 20230424 |
| EPI_ISL_13346760 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2351/2022 | A | 450 | K | 3 | 20220530 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | A | 450 | W | 1 | 20220720 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | A | 450 | F | 1 | 20220506 |
| EPI_ISL_18356473 | NSP3 | hCoV-19/Spain/PV-HUD-35176994/2023 | A | 450 | P | 13 | 20230924 |
| EPI_ISL_10080728 | NSP3 | hCoV-19/India/KA-SEQ_9907_S233_R1_001/2022 | A | 450 | H | 2 | 20220101 |
| EPI_ISL_13282071 | NSP3 | hCoV-19/USA/ID-IBL-656837/2020 | A | 450 | I | 1 | 20200915 |
| EPI_ISL_19805239 | NSP3 | hCoV-19/Russia/SPE-RII-MH229704S/2025 | A | 450 | V | 3489 | 20250319 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | A | 450 | del | 144 | 20240201 |
| EPI_ISL_19181723 | NSP3 | hCoV-19/Singapore/R30MQ139/2024 | A | 450 | S | 112 | 20240521 |
| EPI_ISL_19797179 | NSP3 | hCoV-19/Ireland/CO-CUH-SC0004/2025 | T | 451 | A | 547 | 20250126 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | T | 451 | D | 4 | 20230217 |
| EPI_ISL_4441150 | NSP3 | hCoV-19/India/DL-NCDC-330998/2021 | T | 451 | insPPPCWQSSSRFCNT | 2 | 20210510 |
| EPI_ISL_4486294 | NSP3 | hCoV-19/India/JK-NCDC-4209106/2021 | T | 451 | insPPPCWQSSSRFCT | 1 | 20210609 |
| EPI_ISL_13282071 | NSP3 | hCoV-19/USA/ID-IBL-656837/2020 | T | 451 | F | 1 | 20200915 |
| EPI_ISL_18356473 | NSP3 | hCoV-19/Spain/PV-HUD-35176994/2023 | T | 451 | L | 46 | 20230924 |
| EPI_ISL_14616526 | NSP3 | hCoV-19/France/IDF-AphpSA-ZM000882/2022 | T | 451 | C | 3 | 20220801 |
| EPI_ISL_19805474 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U334-1/2025 | T | 451 | N | 564 | 20250213 |
| EPI_ISL_4493130 | NSP3 | hCoV-19/India/MP-NCDC-410955/2021 | T | 451 | insPPPCWQSSSRFCNTSSMLAIFIQILQHLLHVGT | 1 | 20210604 |
| EPI_ISL_13346760 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2351/2022 | T | 451 | H | 3 | 20220530 |
| EPI_ISL_19348703 | NSP3 | hCoV-19/Morocco/29/2020 | T | 451 | Q | 1 | 20200909 |
| EPI_ISL_14392784 | NSP3 | hCoV-19/India/GA-NCCS-212870113/2021 | T | 451 | insRFCH | 1 | 20211014 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 451 | E | 1 | 20211006 |
| EPI_ISL_19671172 | NSP3 | hCoV-19/USA/CA-PFZ03093/2024 | T | 451 | I | 1759 | 20241215 |
| EPI_ISL_19390476 | NSP3 | hCoV-19/Portugal/INSA_51772/2024 | T | 451 | S | 19 | 20240804 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | T | 451 | W | 1 | 20220720 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | T | 451 | del | 146 | 20240201 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 451 | G | 1 | 20220210 |
| EPI_ISL_19423396 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08378/2024 | T | 451 | P | 56 | 20240903 |
| EPI_ISL_16744874 | NSP3 | hCoV-19/Chile/RM-1120/2023 | T | 451 | Y | 1 | 20230105 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | T | 451 | R | 56 | 20230401 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | L | 452 | V | 10 | 20230217 |
| EPI_ISL_19030025 | NSP3 | hCoV-19/Spain/MD-HULP-072476624/2024 | L | 452 | I | 203 | 20240221 |
| EPI_ISL_15710683 | NSP3 | hCoV-19/USA/TX-Curative-535437/2022 | L | 452 | H | 2 | 20221026 |
| EPI_ISL_18865914 | NSP3 | hCoV-19/USA/NY-NYCPHL-011765/2022 | L | 452 | R | 1 | 20220427 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | L | 452 | A | 3 | 20230116 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | L | 452 | M | 1 | 20220630 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 452 | D | 2 | 20211006 |
| EPI_ISL_18896080 | NSP3 | hCoV-19/England/CLIMB-CM7YRPZ9/2024 | L | 452 | F | 1160 | 20240202 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | L | 452 | del | 33 | 20240201 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 452 | E | 2 | 20220210 |
| EPI_ISL_14616526 | NSP3 | hCoV-19/France/IDF-AphpSA-ZM000882/2022 | L | 452 | S | 6 | 20220801 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 452 | Y | 2 | 20220210 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | L | 452 | G | 1 | 20210526 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | L | 452 | K | 1 | 20210424 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 452 | Q | 2 | 20230217 |
| EPI_ISL_13243125 | NSP3 | hCoV-19/France/HDF-cerba-22T0852562/2022 | L | 452 | J | 12 | 20220531 |
| EPI_ISL_18922515 | NSP3 | hCoV-19/env/Ukraine/81652/2023 | L | 452 | P | 3 | 20231023 |
| EPI_ISL_15734326 | NSP3 | hCoV-19/USA/ID-IBL-862339/2022 | L | 452 | C | 20 | 20221026 |
| EPI_ISL_19373298 | NSP3 | hCoV-19/env/Germany/BY-LGL-6323935/2024 | V | 453 | L | 141 | 20240812 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | V | 453 | S | 1 | 20230116 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | V | 453 | H | 1 | 20220112 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 453 | R | 1 | 20210318 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | V | 453 | Y | 5 | 20220720 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | V | 453 | insstopHstopWQ | 4 | 20220124 |
| EPI_ISL_17957759 | NSP3 | hCoV-19/India/UP-ILSGS21215/2023 | V | 453 | G | 6 | 20230422 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 453 | E | 2 | 20220210 |
| EPI_ISL_19242878 | NSP3 | hCoV-19/Israel/SMC-7117714/2024 | V | 453 | A | 132 | 20240623 |
| EPI_ISL_16408395 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1124/2022 | V | 453 | P | 4 | 20221107 |
| EPI_ISL_15734326 | NSP3 | hCoV-19/USA/ID-IBL-862339/2022 | V | 453 | stop | 19 | 20221026 |
| EPI_ISL_860002 | NSP3 | hCoV-19/United Arab Emirates/4223/2020 | V | 453 | insPGTGGDPGGLLAVDLQPGPDQAV | 1 | 20200504 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | V | 453 | del | 33 | 20240201 |
| EPI_ISL_19829644 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022816_01/2025 | V | 453 | I | 817 | 20250312 |
| EPI_ISL_5216472 | NSP3 | hCoV-19/USA/IN-CDC-ASC210186841/2021 | V | 453 | insIPGPSKKERESLLPKGKstop | 1 | 20210807 |
| EPI_ISL_17614757 | NSP3 | hCoV-19/USA/VA-GBW-H10-012-1708/2023 | V | 453 | F | 73 | 20230424 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | V | 453 | D | 1 | 20220506 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | V | 453 | C | 60 | 20230420 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | S | 454 | D | 2 | 20230116 |
| EPI_ISL_19831372 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56871/2025 | S | 454 | N | 557 | 20250310 |
| EPI_ISL_18454296 | NSP3 | hCoV-19/Thailand/NIC_SKA_8196/2023 | S | 454 | E | 6 | 20231020 |
| EPI_ISL_17711224 | NSP3 | hCoV-19/India/UP-MRU-ICMR-58/2023 | S | 454 | L | 12 | 20230424 |
| EPI_ISL_18098349 | NSP3 | hCoV-19/Kenya/KNPHLGEN125/2022 | S | 454 | A | 3 | 20221223 |
| EPI_ISL_19199348 | NSP3 | hCoV-19/USA/CA-CDPH-500136894/2024 | S | 454 | I | 408 | 20240418 |
| EPI_ISL_19791376 | NSP3 | hCoV-19/Russia/SPE-RII-MH225494S/2025 | S | 454 | G | 928 | 20250204 |
| EPI_ISL_19638832 | NSP3 | hCoV-19/Canada/ON-PHL-202425721/2024 | S | 454 | C | 157 | 20241217 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 454 | V | 4 | 20230217 |
| EPI_ISL_19793507 | NSP3 | hCoV-19/Japan/FPIPH-FR007-0005/2025 | S | 454 | R | 2203 | 20250128 |
| EPI_ISL_2434153 | NSP3 | hCoV-19/USA/TX-GHRC-HD00177225/2021 | S | 454 | K | 2 | 20210120 |
| EPI_ISL_14616526 | NSP3 | hCoV-19/France/IDF-AphpSA-ZM000882/2022 | S | 454 | Y | 5 | 20220801 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | S | 454 | del | 58 | 20240201 |
| EPI_ISL_15734326 | NSP3 | hCoV-19/USA/ID-IBL-862339/2022 | S | 454 | stop | 22 | 20221026 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | S | 454 | H | 54 | 20230401 |
| EPI_ISL_1167198 | NSP3 | hCoV-19/Spain/ML-ISCIII-210815/2021 | S | 454 | F | 1 | 20210129 |
| EPI_ISL_19637356 | NSP3 | hCoV-19/Russia/NIZ-RII-MH212192S/2024 | S | 454 | T | 168 | 20240909 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | S | 454 | P | 1 | 20211006 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | S | 454 | Q | 10 | 20230217 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | D | 455 | F | 2 | 20220630 |
| EPI_ISL_19758347 | NSP3 | hCoV-19/USA/MN-MDH-46310/2025 | D | 455 | G | 570 | 20250214 |
| EPI_ISL_18233656 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48069/2023 | D | 455 | V | 15 | 20230817 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | D | 455 | P | 4 | 20230116 |
| EPI_ISL_18816838 | NSP3 | hCoV-19/USA/TX-HMH-M-137191/2024 | D | 455 | B | 17 | 20240103 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | D | 455 | K | 4 | 20230410 |
| EPI_ISL_19427373 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBC79977/2024 | D | 455 | H | 25 | 20240909 |
| EPI_ISL_8803775 | NSP3 | hCoV-19/India/MH-NCCS-2749001805017/2021 | D | 455 | I | 1 | 20210812 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | D | 455 | C | 1 | 20200807 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 455 | R | 1 | 20210318 |
| EPI_ISL_19633152 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6921/2024 | D | 455 | Y | 106 | 20240820 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | D | 455 | L | 4 | 20211104 |
| EPI_ISL_18948522 | NSP3 | hCoV-19/South Korea/KDCA286175/2024 | D | 455 | A | 57 | 20240205 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | D | 455 | stop | 4 | 20210812 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | D | 455 | Q | 1 | 20220210 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | D | 455 | T | 11 | 20230420 |
| EPI_ISL_18454296 | NSP3 | hCoV-19/Thailand/NIC_SKA_8196/2023 | D | 455 | S | 67 | 20231020 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | D | 455 | insCstopW | 1 | 20211228 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | D | 455 | M | 1 | 20210424 |
| EPI_ISL_19825033 | NSP3 | hCoV-19/USA/CA-PFZ05019/2025 | D | 455 | N | 407 | 20250214 |
| EPI_ISL_18985928 | NSP3 | hCoV-19/env/Ukraine/84940/2024 | D | 455 | del | 148 | 20240201 |
| EPI_ISL_19420572 | NSP3 | hCoV-19/Liaoning/LNCDC-318-3/2024 | D | 455 | E | 131 | 20240826 |
| EPI_ISL_19312905 | NSP3 | hCoV-19/env/Ukraine/84314/2023 | I | 456 | M | 46 | 20231225 |
| EPI_ISL_16408395 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1124/2022 | I | 456 | K | 4 | 20221107 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | I | 456 | Y | 2 | 20230412 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | I | 456 | C | 57 | 20230420 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | I | 456 | A | 5 | 20230217 |
| EPI_ISL_18454289 | NSP3 | hCoV-19/Thailand/NIC_BKK_8183/2023 | I | 456 | B | 1 | 20231019 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | I | 456 | P | 2 | 20230410 |
| EPI_ISL_1208240 | NSP3 | hCoV-19/Scotland/QEUH-1335C62/2021 | I | 456 | insNFG | 3 | 20210225 |
| EPI_ISL_15498468 | NSP3 | hCoV-19/Spain/VC-FISABIO-109623/2022 | I | 456 | insKGAG | 82 | 20220606 |
| EPI_ISL_19176271 | NSP3 | hCoV-19/USA/CA-SCPHL-24WGS00263/2024 | I | 456 | insQG | 1 | 20240115 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | I | 456 | H | 4 | 20230116 |
| EPI_ISL_19662991 | NSP3 | hCoV-19/Canada/ON-PHL-202426821/2024 | I | 456 | V | 441 | 20241230 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 456 | insstopstop | 1 | 20230108 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | I | 456 | del | 115 | 20231218 |
| EPI_ISL_18091591 | NSP3 | hCoV-19/USA/CO-CDPHE-40719572/2023 | I | 456 | L | 29 | 20230405 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 456 | E | 2 | 20220210 |
| EPI_ISL_18454296 | NSP3 | hCoV-19/Thailand/NIC_SKA_8196/2023 | I | 456 | stop | 20 | 20231020 |
| EPI_ISL_19635352 | NSP3 | hCoV-19/USA/CO-CDPHE-42590901/2024 | I | 456 | F | 49 | 20241215 |
| EPI_ISL_19741305 | NSP3 | hCoV-19/USA/CO-CDPHE-42973029/2025 | I | 456 | T | 261 | 20250206 |
| EPI_ISL_18942241 | NSP3 | hCoV-19/England/SFK-USAFSAM-S22460/2024 | I | 456 | S | 408 | 20240206 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | I | 456 | insstopstopH | 46 | 20230401 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 457 | H | 23 | 20230108 |
| EPI_ISL_17730214 | NSP3 | hCoV-19/India/CT-ILS-GS20722/2023 | D | 457 | V | 2 | 20230418 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | D | 457 | L | 9 | 20230116 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | D | 457 | P | 1 | 20200729 |
| EPI_ISL_5923229 | NSP3 | hCoV-19/Senegal/SN-IRVAC-016/2021 | D | 457 | insITFLKKDAPYISDID | 1 | 20210716 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | D | 457 | F | 2 | 20230420 |
| EPI_ISL_17823751 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00008668/2023 | D | 457 | A | 22 | 20230410 |
| EPI_ISL_17711224 | NSP3 | hCoV-19/India/UP-MRU-ICMR-58/2023 | D | 457 | T | 46 | 20230424 |
| EPI_ISL_19156481 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00020859_01/2024 | D | 457 | N | 220 | 20240201 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | D | 457 | S | 9 | 20230410 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | D | 457 | R | 4 | 20220124 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | D | 457 | del | 118 | 20231218 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | D | 457 | insstopstopHstop | 1 | 20220630 |
| EPI_ISL_16098944 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-41086/2022 | D | 457 | G | 46 | 20221016 |
| EPI_ISL_12694400 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471731/2022 | D | 457 | insstopHstop | 6 | 20220126 |
| EPI_ISL_18100389 | NSP3 | hCoV-19/Australia/TAS005876/2023 | D | 457 | B | 18 | 20230622 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | D | 457 | stop | 59 | 20230401 |
| EPI_ISL_8803775 | NSP3 | hCoV-19/India/MH-NCCS-2749001805017/2021 | D | 457 | Q | 2 | 20210812 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | D | 457 | K | 3 | 20221229 |
| EPI_ISL_16713771 | NSP3 | hCoV-19/USA/NY-GBW-H20-280-6282/2023 | D | 457 | Y | 30 | 20230123 |
| EPI_ISL_18459718 | NSP3 | hCoV-19/New Zealand/23YA5421/2023 | D | 457 | E | 35 | 20231003 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | I | 458 | del | 55 | 20231218 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | I | 458 | H | 58 | 20230401 |
| EPI_ISL_18971336 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-1104/2024 | I | 458 | F | 46 | 20240204 |
| EPI_ISL_19824286 | NSP3 | hCoV-19/South Korea/KDCA297278/2025 | I | 458 | T | 2916 | 20250317 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | I | 458 | N | 107 | 20230116 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | I | 458 | E | 8 | 20220720 |
| EPI_ISL_19799609 | NSP3 | hCoV-19/USA/TX-HMH-M-147783/2025 | I | 458 | V | 477 | 20250308 |
| EPI_ISL_18986747 | NSP3 | hCoV-19/Netherlands/ZH-EMC-8644/2024 | I | 458 | M | 11 | 20240110 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | I | 458 | D | 1 | 20230412 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | I | 458 | R | 2 | 20221229 |
| EPI_ISL_19405918 | NSP3 | hCoV-19/Italy/LOM_ASSTMonza_6000412377_0816121800/2024 | I | 458 | L | 178 | 20240816 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 458 | C | 3 | 20220210 |
| EPI_ISL_15782108 | NSP3 | hCoV-19/Indonesia/JK-CW62-2883/2022 | I | 458 | insGKRVCGASR | 3 | 20221028 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | I | 458 | P | 3 | 20220210 |
| EPI_ISL_16549031 | NSP3 | hCoV-19/Malaysia/HPUPM_NGS0910/2022 | I | 458 | insPPVQA | 1 | 20221214 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | I | 458 | S | 188 | 20230420 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | T | 459 | H | 80 | 20230401 |
| EPI_ISL_7087248 | NSP3 | hCoV-19/Malaysia/A162/2021 | T | 459 | insS | 1 | 20210818 |
| EPI_ISL_19169572 | NSP3 | hCoV-19/Israel/ICH-741201343/2024 | T | 459 | N | 354 | 20240501 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | T | 459 | K | 1 | 20210313 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | T | 459 | L | 5 | 20230420 |
| EPI_ISL_16408395 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1124/2022 | T | 459 | F | 1 | 20221107 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | T | 459 | C | 6 | 20220124 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 459 | G | 2 | 20230116 |
| EPI_ISL_10545459 | NSP3 | hCoV-19/USA/TN-ASC-210587864/2022 | T | 459 | insNKSGSGNGEETDLRYIQRSNKHDLINK | 1 | 20220110 |
| EPI_ISL_8803775 | NSP3 | hCoV-19/India/MH-NCCS-2749001805017/2021 | T | 459 | insstopstopHstopHH | 1 | 20210812 |
| EPI_ISL_19425473 | NSP3 | hCoV-19/USA/TX-HMH-M-145613/2024 | T | 459 | I | 783 | 20240824 |
| EPI_ISL_13282071 | NSP3 | hCoV-19/USA/ID-IBL-656837/2020 | T | 459 | stop | 2 | 20200915 |
| EPI_ISL_17885434 | NSP3 | hCoV-19/Brazil/MS-REDE-66/2022 | T | 459 | R | 4 | 20220202 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | T | 459 | insstopstopHstopH | 1 | 20200729 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | T | 459 | V | 1 | 20220630 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | T | 459 | S | 18 | 20231218 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | T | 459 | insSFSG | 8 | 20230217 |
| EPI_ISL_19623892 | NSP3 | hCoV-19/Japan/FR302-1652/2024 | T | 459 | A | 1365 | 20241116 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | T | 459 | E | 3 | 20230410 |
| EPI_ISL_7178369 | NSP3 | hCoV-19/USA/WI-CDC-ASC210484554/2021 | T | 459 | insKHHQ | 1 | 20211118 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | T | 459 | del | 32 | 20230905 |
| EPI_ISL_16033063 | NSP3 | hCoV-19/Spain/MD-HULP-061687716/2022 | T | 459 | P | 35 | 20221126 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | T | 459 | insHSCstopstopHstopHH | 4 | 20220124 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 459 | Y | 1 | 20211006 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 459 | D | 1 | 20220210 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | T | 459 | M | 8 | 20220509 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | F | 460 | M | 2 | 20211006 |
| EPI_ISL_13282071 | NSP3 | hCoV-19/USA/ID-IBL-656837/2020 | F | 460 | H | 3 | 20200915 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | F | 460 | insN | 5 | 20221222 |
| EPI_ISL_16408395 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1124/2022 | F | 460 | T | 1 | 20221107 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | F | 460 | K | 7 | 20220509 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | F | 460 | Y | 15 | 20230217 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | F | 460 | del | 31 | 20230905 |
| EPI_ISL_19008002 | NSP3 | hCoV-19/Italy/LOM-UniMI206/2023 | F | 460 | N | 4 | 20230503 |
| EPI_ISL_19696825 | NSP3 | hCoV-19/Turkey/HSGM-AA000496/2024 | F | 460 | C | 72 | 20240614 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | F | 460 | Q | 2 | 20230410 |
| EPI_ISL_19176345 | NSP3 | hCoV-19/Spain/CE-HUCE-4231745/2024 | F | 460 | V | 56 | 20240313 |
| EPI_ISL_6658015 | NSP3 | hCoV-19/USA/FL-CDC-QDX30656040/2021 | F | 460 | I | 19 | 20211101 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | F | 460 | stop | 2 | 20210817 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | F | 460 | insHSALKFE | 1 | 20211006 |
| EPI_ISL_18119769 | NSP3 | hCoV-19/USA/TX-HMH-M-131205/2023 | F | 460 | L | 70 | 20230809 |
| EPI_ISL_17711224 | NSP3 | hCoV-19/India/UP-MRU-ICMR-58/2023 | F | 460 | S | 178 | 20230424 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | F | 460 | A | 3 | 20221229 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | F | 460 | P | 1 | 20230412 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | F | 460 | G | 7 | 20221222 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | L | 461 | del | 31 | 20230905 |
| EPI_ISL_18827834 | NSP3 | hCoV-19/USA/NY-CDC-LC1087364/2024 | L | 461 | F | 44 | 20240110 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 461 | V | 10 | 20230412 |
| EPI_ISL_13689453 | NSP3 | hCoV-19/USA/AZ-TG1379452/2022 | L | 461 | S | 26 | 20220603 |
| EPI_ISL_18643024 | NSP3 | hCoV-19/Italy/LOM-UniMI137/2023 | L | 461 | I | 14 | 20230914 |
| EPI_ISL_14402495 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12056/2022 | L | 461 | C | 2 | 20220616 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | L | 461 | insSstop | 3 | 20210805 |
| EPI_ISL_17713702 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000202683SP/2022 | L | 461 | insXX | 1 | 20221115 |
| EPI_ISL_19008002 | NSP3 | hCoV-19/Italy/LOM-UniMI206/2023 | L | 461 | K | 5 | 20230503 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | L | 461 | A | 1 | 20210424 |
| EPI_ISL_13282071 | NSP3 | hCoV-19/USA/ID-IBL-656837/2020 | L | 461 | P | 1 | 20200915 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | L | 461 | E | 3 | 20220720 |
| EPI_ISL_14437883 | NSP3 | hCoV-19/USA/CA-CDPH-MYWNDTPHSVMFD/2022 | L | 461 | stop | 12 | 20220726 |
| EPI_ISL_12582761 | NSP3 | hCoV-19/Turkey/HSGM-GS2189/2022 | L | 461 | T | 1 | 20220410 |
| EPI_ISL_11274258 | NSP3 | hCoV-19/England/MILK-3A7861D/2022 | L | 461 | J | 2 | 20220312 |
| EPI_ISL_5923236 | NSP3 | hCoV-19/Senegal/SN-IR1-0074232/2021 | L | 461 | insKKDAPYIVGDSDIDITFL | 1 | 20211025 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 461 | R | 5 | 20230410 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 461 | G | 2 | 20230217 |
| EPI_ISL_18671136 | NSP3 | hCoV-19/New Zealand/23YA7230/2023 | K | 462 | Q | 15 | 20231129 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 462 | A | 2 | 20221229 |
| EPI_ISL_16408395 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1124/2022 | K | 462 | D | 2 | 20221107 |
| EPI_ISL_19633136 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6898/2024 | K | 462 | N | 3006 | 20240805 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | K | 462 | insstop | 108 | 20230401 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 462 | L | 3 | 20230116 |
| EPI_ISL_17711089 | NSP3 | hCoV-19/Norway/6233/2023 | K | 462 | T | 178 | 20230424 |
| EPI_ISL_12368317 | NSP3 | hCoV-19/Germany/BW-RKI-I-757067/2022 | K | 462 | M | 19 | 20220419 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | K | 462 | E | 131 | 20231218 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | K | 462 | insL | 9 | 20230217 |
| EPI_ISL_19442027 | NSP3 | hCoV-19/USA/PA-CDC-LC1120444/2024 | K | 462 | R | 277 | 20240910 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | K | 462 | del | 25 | 20230905 |
| EPI_ISL_17711224 | NSP3 | hCoV-19/India/UP-MRU-ICMR-58/2023 | K | 462 | S | 124 | 20230424 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | K | 462 | H | 5 | 20221222 |
| EPI_ISL_13563924 | NSP3 | hCoV-19/USA/ID-IBL-824233/2022 | K | 462 | stop | 2 | 20220531 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 463 | S | 3 | 20230116 |
| EPI_ISL_19231953 | NSP3 | hCoV-19/Russia/PER-RII-MH191092S/2024 | K | 463 | Q | 983 | 20240402 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | K | 463 | insL | 1 | 20210813 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | K | 463 | insKLEQV | 1 | 20230420 |
| EPI_ISL_19082255 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140872/2024 | K | 463 | E | 306 | 20240415 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | K | 463 | del | 29 | 20230905 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | K | 463 | M | 3 | 20231218 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | K | 463 | T | 96 | 20230217 |
| EPI_ISL_13346206 | NSP3 | hCoV-19/USA/ID-IBL-824087/2022 | K | 463 | stop | 6 | 20220531 |
| EPI_ISL_18924269 | NSP3 | hCoV-19/South Korea/KDCA285407/2024 | K | 463 | N | 91 | 20240130 |
| EPI_ISL_3636272 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ13948/2021 | K | 463 | A | 1 | 20210806 |
| EPI_ISL_19790236 | NSP3 | hCoV-19/Netherlands/NH-RIVM-145200/2025 | K | 463 | R | 431 | 20250223 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 463 | L | 1 | 20221229 |
| EPI_ISL_16408395 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1124/2022 | K | 463 | I | 1 | 20221107 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | K | 463 | P | 6 | 20221222 |
| EPI_ISL_19504526 | NSP3 | hCoV-19/Liaoning/LNCDC-346-7/2024 | D | 464 | A | 114 | 20240924 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | D | 464 | L | 2 | 20230412 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | D | 464 | T | 1 | 20210424 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | D | 464 | N | 313 | 20250116 |
| EPI_ISL_12291325 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1056/2022 | D | 464 | I | 2 | 20220126 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | D | 464 | R | 89 | 20230401 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | D | 464 | del | 41 | 20230905 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | D | 464 | Q | 8 | 20220509 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | D | 464 | F | 1 | 20230217 |
| EPI_ISL_12582717 | NSP3 | hCoV-19/Turkey/HSGM-G8459/2022 | D | 464 | S | 5 | 20220401 |
| EPI_ISL_17495395 | NSP3 | hCoV-19/Zhejiang/ZJCDC-710/2023 | D | 464 | H | 12 | 20230402 |
| EPI_ISL_19788216 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-14215/2024 | D | 464 | E | 217 | 20241230 |
| EPI_ISL_5923234 | NSP3 | hCoV-19/Senegal/SN-IRVAC-263/2021 | D | 464 | insAPYIVGDSDIDITFLKKD | 3 | 20210817 |
| EPI_ISL_19802314 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10926/2025 | D | 464 | Y | 2714 | 20250313 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | D | 464 | K | 109 | 20231218 |
| EPI_ISL_19615362 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS502715/2024 | D | 464 | G | 700 | 20241204 |
| EPI_ISL_19053911 | NSP3 | hCoV-19/env/Germany/BY-LGL-6167334/2024 | D | 464 | C | 7 | 20240313 |
| EPI_ISL_17236935 | NSP3 | hCoV-19/USA/MA-CDC-LC1025630/2023 | D | 464 | B | 11 | 20230228 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | D | 464 | M | 4 | 20221229 |
| EPI_ISL_17473030 | NSP3 | hCoV-19/USA/WA-GBW-H20-292-4937/2023 | D | 464 | V | 6 | 20230404 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | A | 465 | L | 6 | 20230116 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | A | 465 | N | 10 | 20230217 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | A | 465 | G | 9 | 20230217 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 465 | P | 7 | 20230217 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | A | 465 | M | 108 | 20230401 |
| EPI_ISL_19795208 | NSP3 | hCoV-19/USA/NY-CDC-LC1135259/2025 | A | 465 | V | 13059 | 20250310 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | A | 465 | del | 30 | 20230905 |
| EPI_ISL_19293240 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-139806/2024 | A | 465 | S | 206 | 20240714 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 465 | F | 1 | 20211006 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | A | 465 | C | 88 | 20230401 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 465 | E | 2 | 20221229 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 465 | Y | 1 | 20250116 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | A | 465 | K | 7 | 20230217 |
| EPI_ISL_19428838 | NSP3 | hCoV-19/USA/NY-URMC-O8S1Q088-1/2024 | A | 465 | T | 281 | 20240801 |
| EPI_ISL_17052217 | NSP3 | hCoV-19/USA/TX-UTEP-B002532918/2022 | A | 465 | D | 156 | 20220725 |
| EPI_ISL_14333186 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-95602/2022 | A | 465 | I | 2 | 20220722 |
| EPI_ISL_12617599 | NSP3 | hCoV-19/USA/ID-IBL-720162/2021 | A | 465 | R | 1 | 20210330 |
| EPI_ISL_19053911 | NSP3 | hCoV-19/env/Germany/BY-LGL-6167334/2024 | P | 466 | I | 9 | 20240313 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | P | 466 | del | 36 | 20230905 |
| EPI_ISL_15018971 | NSP3 | hCoV-19/France/IDF-HB-112203110433/2022 | P | 466 | G | 2 | 20220328 |
| EPI_ISL_19188712 | NSP3 | hCoV-19/USA/TX-HMH-M-140944/2024 | P | 466 | S | 1443 | 20240424 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | P | 466 | A | 12 | 20250116 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | P | 466 | insT | 1 | 20230217 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | P | 466 | K | 1 | 20230412 |
| EPI_ISL_17713675 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200491498N2/2022 | P | 466 | R | 11 | 20221116 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | P | 466 | D | 2 | 20220210 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | P | 466 | E | 9 | 20231218 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | P | 466 | insL | 3 | 20220227 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | P | 466 | N | 2 | 20230116 |
| EPI_ISL_5020722 | NSP3 | hCoV-19/Brazil/SP-IB_133699/2021 | P | 466 | stop | 2 | 20210913 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | P | 466 | T | 34 | 20221229 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 466 | C | 1 | 20210318 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | P | 466 | M | 4 | 20230108 |
| EPI_ISL_18824792 | NSP3 | hCoV-19/Netherlands/ZE-RIVM-137346/2024 | P | 466 | L | 368 | 20240112 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | P | 466 | insV | 1 | 20210424 |
| EPI_ISL_6357248 | NSP3 | hCoV-19/Romania/33055/2021 | P | 466 | F | 1 | 20210104 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 466 | insYYTA | 1 | 20211006 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | P | 466 | V | 10 | 20230217 |
| EPI_ISL_12291325 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1056/2022 | P | 466 | H | 5 | 20220126 |
| EPI_ISL_6949077 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-66216/2021 | P | 466 | Q | 20 | 20211009 |
| EPI_ISL_5020722 | NSP3 | hCoV-19/Brazil/SP-IB_133699/2021 | Y | 467 | W | 2 | 20210913 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | Y | 467 | E | 1 | 20210526 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | Y | 467 | T | 12 | 20230217 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 467 | M | 1 | 20211006 |
| EPI_ISL_13408155 | NSP3 | hCoV-19/Spain/AS-252225721/2022 | Y | 467 | stop | 5 | 20220603 |
| EPI_ISL_19638823 | NSP3 | hCoV-19/Canada/ON-PHL-202425708/2024 | Y | 467 | H | 505 | 20241218 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 467 | L | 4 | 20230108 |
| EPI_ISL_15018971 | NSP3 | hCoV-19/France/IDF-HB-112203110433/2022 | Y | 467 | G | 3 | 20220328 |
| EPI_ISL_13902194 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SJH-456046/2022 | Y | 467 | N | 4 | 20220531 |
| EPI_ISL_17530291 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14032/2023 | Y | 467 | insN | 3 | 20230406 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | Y | 467 | I | 45 | 20230401 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | Y | 467 | del | 45 | 20230905 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | Y | 467 | V | 1 | 20210424 |
| EPI_ISL_9672902 | NSP3 | hCoV-19/Finland/THL-202202621/2022 | Y | 467 | D | 2 | 20220109 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | Y | 467 | A | 1 | 20230412 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Y | 467 | Q | 7 | 20220509 |
| EPI_ISL_8170854 | NSP3 | hCoV-19/Pakistan/DUHS13/2021 | Y | 467 | S | 2 | 20211214 |
| EPI_ISL_17713675 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200491498N2/2022 | Y | 467 | C | 3 | 20221116 |
| EPI_ISL_10306559 | NSP3 | hCoV-19/India/KA-CBR-1402KDG004/2022 | Y | 467 | R | 2 | 20220131 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 467 | P | 2 | 20220210 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | Y | 467 | K | 2 | 20231218 |
| EPI_ISL_17530291 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14032/2023 | Y | 467 | F | 10 | 20230406 |
| EPI_ISL_19807158 | NSP3 | hCoV-19/Canada/ON-KHS-202500641-v1/2025 | I | 468 | T | 294 | 20250213 |
| EPI_ISL_19714347 | NSP3 | hCoV-19/Russia/VLG-RII-MH217546S/2024 | I | 468 | L | 62 | 20241126 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | I | 468 | insstop | 1 | 20210806 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | I | 468 | stop | 1 | 20210802 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | I | 468 | G | 2 | 20221229 |
| EPI_ISL_19687868 | NSP3 | hCoV-19/South Korea/KDCA296725/2024 | I | 468 | V | 372 | 20241228 |
| EPI_ISL_2801523 | NSP3 | hCoV-19/USA/OR-OSPHL01077/2021 | I | 468 | insNC | 1 | 20210623 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 468 | D | 1 | 20210318 |
| EPI_ISL_2801523 | NSP3 | hCoV-19/USA/OR-OSPHL01077/2021 | I | 468 | F | 2 | 20210623 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | I | 468 | Y | 44 | 20230401 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | I | 468 | Q | 3 | 20231218 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 468 | H | 4 | 20230108 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 468 | P | 2 | 20220210 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | I | 468 | del | 43 | 20230905 |
| EPI_ISL_12582761 | NSP3 | hCoV-19/Turkey/HSGM-GS2189/2022 | I | 468 | A | 3 | 20220410 |
| EPI_ISL_19459301 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242863/2024 | I | 468 | S | 5 | 20240715 |
| EPI_ISL_18052440 | NSP3 | hCoV-19/Portugal/PT48934/2023 | I | 468 | K | 22 | 20230710 |
| EPI_ISL_17530291 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14032/2023 | I | 468 | C | 4 | 20230406 |
| EPI_ISL_19751634 | NSP3 | hCoV-19/Canada/BC-BCCDC-768074/2025 | I | 468 | R | 7 | 20250130 |
| EPI_ISL_2747953 | NSP3 | hCoV-19/England/PHEC-3293BA/2021 | I | 468 | J | 5 | 20210624 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | I | 468 | E | 1 | 20220210 |
| EPI_ISL_19756481 | NSP3 | hCoV-19/Russia/SPE-RII-MH223076S/2024 | I | 468 | M | 351 | 20241223 |
| EPI_ISL_19587111 | NSP3 | hCoV-19/Sweden/U-R908229/2024 | V | 469 | L | 332 | 20241114 |
| EPI_ISL_9495720 | NSP3 | hCoV-19/Costa Rica/INC-2819-736020/2022 | V | 469 | T | 7 | 20220118 |
| EPI_ISL_15018971 | NSP3 | hCoV-19/France/IDF-HB-112203110433/2022 | V | 469 | G | 3 | 20220328 |
| EPI_ISL_17713675 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200491498N2/2022 | V | 469 | insYS | 1 | 20221116 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | V | 469 | S | 51 | 20230401 |
| EPI_ISL_13871259 | NSP3 | hCoV-19/USA/ID-IBL-834098/2022 | V | 469 | W | 2 | 20220618 |
| EPI_ISL_17530328 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14036/2023 | V | 469 | I | 16 | 20230405 |
| EPI_ISL_17530291 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14032/2023 | V | 469 | C | 7 | 20230406 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | V | 469 | K | 12 | 20230217 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | V | 469 | Y | 3 | 20220630 |
| EPI_ISL_19464980 | NSP3 | hCoV-19/England/CLIMB-CM7YJS7N/2024 | V | 469 | E | 69 | 20240926 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | V | 469 | stop | 105 | 20230401 |
| EPI_ISL_19391222 | NSP3 | hCoV-19/USA/UT-UPHL-240906740819/2024 | V | 469 | A | 488 | 20240815 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 469 | D | 1 | 20230217 |
| EPI_ISL_19470184 | NSP3 | hCoV-19/env/Ukraine/84769/2024 | V | 469 | R | 2 | 20240122 |
| EPI_ISL_19459301 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242863/2024 | V | 469 | del | 45 | 20240715 |
| EPI_ISL_19811173 | NSP3 | hCoV-19/Brazil/RN-LACENRN-241118539/2024 | V | 469 | M | 795 | 20241230 |
| EPI_ISL_6357248 | NSP3 | hCoV-19/Romania/33055/2021 | G | 470 | P | 1 | 20210104 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | G | 470 | E | 4 | 20231218 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | G | 470 | insstop | 1 | 20210805 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | G | 470 | R | 2 | 20210805 |
| EPI_ISL_10492189 | NSP3 | hCoV-19/USA/MI-CDC-ASC210861033/2022 | G | 470 | D | 4 | 20220217 |
| EPI_ISL_17588463 | NSP3 | hCoV-19/USA/TX-HMH-M-128265/2023 | G | 470 | A | 12 | 20230413 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | G | 470 | W | 104 | 20230401 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | G | 470 | L | 1 | 20210424 |
| EPI_ISL_18895661 | NSP3 | hCoV-19/USA/WA-CDC-UW24020638230/2024 | G | 470 | C | 49 | 20240206 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | G | 470 | insA | 10 | 20230217 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | G | 470 | del | 56 | 20230905 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | G | 470 | insL | 1 | 20210424 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | G | 470 | N | 9 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 470 | F | 1 | 20220210 |
| EPI_ISL_19381093 | NSP3 | hCoV-19/Spain/AS-HUCA-232464408/2024 | G | 470 | V | 9 | 20240822 |
| EPI_ISL_14333186 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-95602/2022 | G | 470 | K | 5 | 20220722 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 470 | stop | 6 | 20230108 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | G | 470 | S | 325 | 20221222 |
| EPI_ISL_18980896 | NSP3 | hCoV-19/USA/TX-HMH-M-140157/2024 | D | 471 | H | 4 | 20240229 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | D | 471 | del | 57 | 20230905 |
| EPI_ISL_13871259 | NSP3 | hCoV-19/USA/ID-IBL-834098/2022 | D | 471 | C | 2 | 20220618 |
| EPI_ISL_17530291 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14032/2023 | D | 471 | Y | 8 | 20230406 |
| EPI_ISL_19459301 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242863/2024 | D | 471 | stop | 47 | 20240715 |
| EPI_ISL_16971734 | NSP3 | hCoV-19/Japan/PG-445485/2023 | D | 471 | A | 15 | 20230126 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 471 | S | 3 | 20220210 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | D | 471 | K | 2 | 20221229 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | D | 471 | Q | 3 | 20231218 |
| EPI_ISL_19799629 | NSP3 | hCoV-19/USA/TX-HMH-M-147756/2025 | D | 471 | G | 51 | 20250303 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | D | 471 | B | 4 | 20240105 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | D | 471 | T | 2 | 20230412 |
| EPI_ISL_5337379 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-53829/2021 | D | 471 | M | 1 | 20210808 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | D | 471 | V | 109 | 20230401 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 471 | W | 3 | 20230108 |
| EPI_ISL_19000117 | NSP3 | hCoV-19/USA/MN-MDH-41132/2024 | D | 471 | E | 23 | 20240302 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | D | 471 | N | 143 | 20250116 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | D | 471 | R | 5 | 20220630 |
| EPI_ISL_12291325 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1056/2022 | D | 471 | I | 2 | 20220126 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | V | 472 | stop | 1 | 20211006 |
| EPI_ISL_14302914 | NSP3 | hCoV-19/Finland/VI-7471/2022 | V | 472 | D | 5 | 20220709 |
| EPI_ISL_19061211 | NSP3 | hCoV-19/Hubei/HCDC-YC4635/2024 | V | 472 | G | 4 | 20240329 |
| EPI_ISL_1257900 | NSP3 | hCoV-19/Italy/CAM-INTPas-C14b/2021 | V | 472 | N | 1 | 20210310 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 472 | K | 5 | 20231218 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | V | 472 | M | 107 | 20230401 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | V | 472 | T | 6 | 20230412 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | V | 472 | del | 57 | 20230905 |
| EPI_ISL_13871259 | NSP3 | hCoV-19/USA/ID-IBL-834098/2022 | V | 472 | W | 1 | 20220618 |
| EPI_ISL_14249023 | NSP3 | hCoV-19/Israel/ICH-741178701/2022 | V | 472 | L | 10 | 20220722 |
| EPI_ISL_19805244 | NSP3 | hCoV-19/Russia/SPE-RII-MH229759S/2025 | V | 472 | I | 525 | 20250307 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 472 | E | 1 | 20220210 |
| EPI_ISL_4311886 | NSP3 | hCoV-19/England/PHEC-Z305Z4A2/2021 | V | 472 | Y | 1 | 20210909 |
| EPI_ISL_12291360 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1094/2022 | V | 472 | R | 3 | 20220129 |
| EPI_ISL_17226794 | NSP3 | hCoV-19/USA/ND-NDDH-22973/2023 | V | 472 | F | 229 | 20230227 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | V | 472 | C | 43 | 20230401 |
| EPI_ISL_16021323 | NSP3 | hCoV-19/Israel/SMC-7110316/2022 | V | 472 | A | 9 | 20221124 |
| EPI_ISL_19348685 | NSP3 | hCoV-19/Morocco/11/2020 | V | 472 | S | 1 | 20201201 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | V | 473 | G | 3 | 20230412 |
| EPI_ISL_17530291 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14032/2023 | V | 473 | Y | 7 | 20230406 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 473 | insLF | 1 | 20230108 |
| EPI_ISL_16867036 | NSP3 | hCoV-19/England/PLYM-326BB3EE/2023 | V | 473 | A | 224 | 20230202 |
| EPI_ISL_4311744 | NSP3 | hCoV-19/England/PHEC-Z304Z94A/2021 | V | 473 | E | 1 | 20210827 |
| EPI_ISL_14333186 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-95602/2022 | V | 473 | P | 8 | 20220722 |
| EPI_ISL_13871259 | NSP3 | hCoV-19/USA/ID-IBL-834098/2022 | V | 473 | W | 1 | 20220618 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | V | 473 | C | 45 | 20230401 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | V | 473 | del | 60 | 20230905 |
| EPI_ISL_13576105 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-10672/2022 | V | 473 | D | 5 | 20220609 |
| EPI_ISL_1257900 | NSP3 | hCoV-19/Italy/CAM-INTPas-C14b/2021 | V | 473 | H | 1 | 20210310 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 473 | L | 124 | 20250116 |
| EPI_ISL_19809820 | NSP3 | hCoV-19/USA/NY-PRL-250325_81H09/2025 | V | 473 | I | 1764 | 20250317 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 473 | M | 4 | 20230108 |
| EPI_ISL_19828173 | NSP3 | hCoV-19/Australia/QLD0x0154C9/2025 | V | 473 | F | 11238 | 20250326 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 473 | T | 3 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 474 | M | 1 | 20220210 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | Q | 474 | Y | 4 | 20230412 |
| EPI_ISL_17530319 | NSP3 | hCoV-19/India/MH-ICMR-NIV-232291/2023 | Q | 474 | L | 12 | 20230405 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | Q | 474 | A | 2 | 20231218 |
| EPI_ISL_2441090 | NSP3 | hCoV-19/India/AP-CCMB-CIA2374/2021 | Q | 474 | T | 1 | 20210218 |
| EPI_ISL_18713021 | NSP3 | hCoV-19/Macedonia/IPH-MKD-998R/2023 | Q | 474 | K | 73 | 20231109 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | Q | 474 | F | 107 | 20230401 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | Q | 474 | S | 52 | 20230412 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | Q | 474 | I | 2 | 20210526 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Q | 474 | E | 12 | 20250116 |
| EPI_ISL_19761452 | NSP3 | hCoV-19/USA/DE-DHSS-1184/2025 | Q | 474 | H | 381 | 20250210 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | Q | 474 | del | 67 | 20230905 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Q | 474 | P | 4 | 20221229 |
| EPI_ISL_19696828 | NSP3 | hCoV-19/Turkey/HSGM-AA000517/2024 | Q | 474 | stop | 19 | 20240719 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Q | 474 | G | 1 | 20211006 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | Q | 474 | N | 1 | 20210424 |
| EPI_ISL_19697782 | NSP3 | hCoV-19/Australia/QLD0x0150CE/2025 | Q | 474 | R | 1074 | 20250110 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | Q | 474 | insPLVYFTK | 1 | 20210424 |
| EPI_ISL_13346206 | NSP3 | hCoV-19/USA/ID-IBL-824087/2022 | E | 475 | F | 2 | 20220531 |
| EPI_ISL_3775843 | NSP3 | hCoV-19/England/PHEC-T308T366/2021 | E | 475 | M | 1 | 20210816 |
| EPI_ISL_19505565 | NSP3 | hCoV-19/Wales/CLIMB-CM7YFF81/2024 | E | 475 | Z | 5 | 20241007 |
| EPI_ISL_19647309 | NSP3 | hCoV-19/Canada/ON-PHL-202426604/2024 | E | 475 | A | 57 | 20241228 |
| EPI_ISL_13871259 | NSP3 | hCoV-19/USA/ID-IBL-834098/2022 | E | 475 | Y | 2 | 20220618 |
| EPI_ISL_19752828 | NSP3 | hCoV-19/Brazil/AC-IEC-002371/2024 | E | 475 | Q | 37 | 20241220 |
| EPI_ISL_15718673 | NSP3 | hCoV-19/India/DL-ILBSWGS7195/2022 | E | 475 | insGVLTAVVLALSK | 4 | 20220822 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 475 | P | 1 | 20220210 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | E | 475 | del | 76 | 20230905 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | E | 475 | I | 3 | 20221229 |
| EPI_ISL_18255102 | NSP3 | hCoV-19/Pakistan/PACP-B13-S04/2023 | E | 475 | S | 6 | 20230313 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 475 | H | 1 | 20220210 |
| EPI_ISL_19803479 | NSP3 | hCoV-19/USA/WI-WSLH-2500985/2025 | E | 475 | D | 723 | 20250307 |
| EPI_ISL_19750840 | NSP3 | hCoV-19/Japan/FR021-0097/2025 | E | 475 | K | 717 | 20250124 |
| EPI_ISL_16459456 | NSP3 | hCoV-19/Switzerland/SO-ETHZ-38007392/2022 | E | 475 | stop | 12 | 20221219 |
| EPI_ISL_19291539 | NSP3 | hCoV-19/France/ARA-HCL024107515101/2023 | E | 475 | V | 30 | 20231211 |
| EPI_ISL_18880049 | NSP3 | hCoV-19/Brazil/MS-IAL-357411654/2023 | E | 475 | G | 285 | 20231129 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | E | 475 | R | 60 | 20230401 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | E | 475 | C | 1 | 20220630 |
| EPI_ISL_19143509 | NSP3 | hCoV-19/Pakistan/GRH42662/2024 | E | 475 | N | 4 | 20240320 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | G | 476 | insHSNHPKIKTVD | 1 | 20210424 |
| EPI_ISL_17530319 | NSP3 | hCoV-19/India/MH-ICMR-NIV-232291/2023 | G | 476 | stop | 3 | 20230405 |
| EPI_ISL_19828641 | NSP3 | hCoV-19/Japan/FR055-0177/2025 | G | 476 | insAR | 8 | 20250319 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | G | 476 | N | 1 | 20211006 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | G | 476 | D | 157 | 20230412 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | G | 476 | R | 105 | 20230401 |
| EPI_ISL_3775843 | NSP3 | hCoV-19/England/PHEC-T308T366/2021 | G | 476 | insSRstopFstop | 1 | 20210816 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | G | 476 | insKKVKPTV | 7 | 20230217 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | G | 476 | E | 9 | 20220509 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | G | 476 | Q | 1 | 20230217 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | G | 476 | K | 3 | 20230412 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | G | 476 | insCF | 1 | 20210730 |
| EPI_ISL_19004980 | NSP3 | hCoV-19/Pakistan/KMU_PHRL_1208/2024 | G | 476 | V | 20 | 20240307 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | G | 476 | del | 80 | 20231218 |
| EPI_ISL_1257900 | NSP3 | hCoV-19/Italy/CAM-INTPas-C14b/2021 | G | 476 | H | 1 | 20210310 |
| EPI_ISL_19143509 | NSP3 | hCoV-19/Pakistan/GRH42662/2024 | G | 476 | C | 48 | 20240320 |
| EPI_ISL_19348703 | NSP3 | hCoV-19/Morocco/29/2020 | G | 476 | insKK | 2 | 20200909 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | G | 476 | W | 3 | 20220602 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | G | 476 | I | 2 | 20210803 |
| EPI_ISL_5337379 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-53829/2021 | G | 476 | insFstop | 1 | 20210808 |
| EPI_ISL_14253443 | NSP3 | hCoV-19/USA/ID-IBL-837862/2022 | G | 476 | F | 2 | 20220708 |
| EPI_ISL_19530709 | NSP3 | hCoV-19/Japan/FR082-0230/2024 | G | 476 | S | 553 | 20241017 |
| EPI_ISL_19828641 | NSP3 | hCoV-19/Japan/FR055-0177/2025 | G | 476 | A | 18 | 20250319 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | G | 476 | Y | 1 | 20220210 |
| EPI_ISL_4311744 | NSP3 | hCoV-19/England/PHEC-Z304Z94A/2021 | G | 476 | P | 2 | 20210827 |
| EPI_ISL_19348696 | NSP3 | hCoV-19/Morocco/22/2020 | V | 477 | N | 1 | 20201101 |
| EPI_ISL_19408142 | NSP3 | hCoV-19/USA/CA-SC-285094/2024 | V | 477 | G | 102 | 20240716 |
| EPI_ISL_19716284 | NSP3 | hCoV-19/USA/PA-CDC-LC1129612/2025 | V | 477 | A | 572 | 20250113 |
| EPI_ISL_14253443 | NSP3 | hCoV-19/USA/ID-IBL-837862/2022 | V | 477 | Y | 1 | 20220708 |
| EPI_ISL_10858397 | NSP3 | hCoV-19/Turkey/HSGM-G2150/2022 | V | 477 | D | 199 | 20220217 |
| EPI_ISL_19143509 | NSP3 | hCoV-19/Pakistan/GRH42662/2024 | V | 477 | P | 3 | 20240320 |
| EPI_ISL_19667719 | NSP3 | hCoV-19/Ireland/LK-UHL-695946/2024 | V | 477 | I | 1898 | 20241224 |
| EPI_ISL_13346206 | NSP3 | hCoV-19/USA/ID-IBL-824087/2022 | V | 477 | S | 7 | 20220531 |
| EPI_ISL_19714377 | NSP3 | hCoV-19/Russia/VLG-RII-MH217577S/2024 | V | 477 | L | 21 | 20241128 |
| EPI_ISL_19793758 | NSP3 | hCoV-19/Canada/NS-NSH-769161/2025 | V | 477 | F | 4383 | 20250306 |
| EPI_ISL_17425888 | NSP3 | hCoV-19/India/MH-CSIR-2939/2023 | V | 477 | C | 49 | 20230401 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | V | 477 | K | 1 | 20230412 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 477 | del | 55 | 20231218 |
| EPI_ISL_2801523 | NSP3 | hCoV-19/USA/OR-OSPHL01077/2021 | V | 477 | W | 1 | 20210623 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | V | 477 | stop | 1 | 20220602 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | V | 477 | insF | 3 | 20220117 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 477 | T | 2 | 20230412 |
| EPI_ISL_13714578 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-104/2022 | V | 477 | M | 1 | 20220629 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | L | 478 | P | 1 | 20230412 |
| EPI_ISL_19696825 | NSP3 | hCoV-19/Turkey/HSGM-AA000496/2024 | L | 478 | I | 21 | 20240614 |
| EPI_ISL_18532730 | NSP3 | hCoV-19/USA/MD-CDC-QDX86356392/2023 | L | 478 | F | 163 | 20231012 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 478 | A | 2 | 20221229 |
| EPI_ISL_17591970 | NSP3 | hCoV-19/Nepal/NPHL-S-2423/2023 | L | 478 | stop | 7 | 20230311 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 478 | T | 2 | 20230412 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | L | 478 | del | 44 | 20231218 |
| EPI_ISL_17089353 | NSP3 | hCoV-19/USA/ID-IBL-875716/2023 | L | 478 | M | 2 | 20230213 |
| EPI_ISL_19101226 | NSP3 | hCoV-19/Burkina Faso/CHUSS_16062/2022 | L | 478 | S | 174 | 20220823 |
| EPI_ISL_2801523 | NSP3 | hCoV-19/USA/OR-OSPHL01077/2021 | L | 478 | W | 1 | 20210623 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 478 | Y | 1 | 20210318 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | L | 478 | insDYG | 1 | 20210313 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 478 | K | 10 | 20220509 |
| EPI_ISL_19333228 | NSP3 | hCoV-19/Ukraine/86378/2024 | L | 478 | V | 72 | 20240727 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | L | 478 | D | 1 | 20210526 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | L | 478 | Q | 1 | 20220630 |
| EPI_ISL_11767883 | NSP3 | hCoV-19/India/KA-SLS-7368/2021 | L | 478 | J | 2 | 20210901 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | L | 478 | N | 2 | 20220721 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | L | 478 | C | 1 | 20220602 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | L | 478 | G | 2 | 20220112 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | T | 479 | Q | 1 | 20220630 |
| EPI_ISL_13282093 | NSP3 | hCoV-19/USA/ID-IBL-656311/2020 | T | 479 | M | 1 | 20200914 |
| EPI_ISL_17089353 | NSP3 | hCoV-19/USA/ID-IBL-875716/2023 | T | 479 | C | 3 | 20230213 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | T | 479 | Y | 2 | 20220630 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | T | 479 | S | 9 | 20220630 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | T | 479 | del | 43 | 20231218 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | T | 479 | V | 3 | 20230412 |
| EPI_ISL_18759857 | NSP3 | hCoV-19/Slovakia/ruvztn_05_00002665/2023 | T | 479 | I | 1173 | 20231122 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 479 | D | 1 | 20210424 |
| EPI_ISL_18439273 | NSP3 | hCoV-19/South Korea/KDCA268859/2023 | T | 479 | P | 14 | 20230922 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 479 | G | 1 | 20211006 |
| EPI_ISL_17713468 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000198029SP/2022 | T | 479 | L | 7 | 20221006 |
| EPI_ISL_14253443 | NSP3 | hCoV-19/USA/ID-IBL-837862/2022 | T | 479 | K | 4 | 20220708 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | T | 479 | stop | 100 | 20230401 |
| EPI_ISL_13714578 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-104/2022 | T | 479 | W | 5 | 20220629 |
| EPI_ISL_13563923 | NSP3 | hCoV-19/USA/ID-IBL-824101/2022 | T | 479 | F | 4 | 20220531 |
| EPI_ISL_10296629 | NSP3 | hCoV-19/Germany/HE-RKI-I-558886/2022 | T | 479 | A | 4 | 20220210 |
| EPI_ISL_18115498 | NSP3 | hCoV-19/Thailand/NIC_BKK_7322/2023 | T | 479 | N | 81 | 20230704 |
| EPI_ISL_17527081 | NSP3 | hCoV-19/Sweden/UUH-290312/2023 | A | 480 | T | 30 | 20230109 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | A | 480 | stop | 4 | 20230213 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | A | 480 | Q | 1 | 20220602 |
| EPI_ISL_19705999 | NSP3 | hCoV-19/Germany/BY-RKI-I-1147523/2025 | A | 480 | V | 15518 | 20250113 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | A | 480 | P | 4 | 20211203 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | A | 480 | D | 9 | 20221222 |
| EPI_ISL_12773020 | NSP3 | hCoV-19/England/QEUH-3D1158F/2022 | A | 480 | G | 4 | 20220402 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | A | 480 | insstopQ | 1 | 20210802 |
| EPI_ISL_19461278 | NSP3 | hCoV-19/Canada/BC-BCCDC-734856/2024 | A | 480 | del | 48 | 20240909 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | A | 480 | K | 3 | 20230412 |
| EPI_ISL_17099862 | NSP3 | hCoV-19/Sweden/01_SE100_23CS500890/2023 | A | 480 | F | 12 | 20230218 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | A | 480 | I | 2 | 20230412 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | A | 480 | R | 2 | 20211015 |
| EPI_ISL_18439273 | NSP3 | hCoV-19/South Korea/KDCA268859/2023 | A | 480 | S | 30 | 20230922 |
| EPI_ISL_17302200 | NSP3 | hCoV-19/Germany/MV-UMG-19013714/2021 | A | 480 | M | 9 | 20210503 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | A | 480 | Y | 1 | 20220210 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | A | 480 | L | 111 | 20230401 |
| EPI_ISL_18115498 | NSP3 | hCoV-19/Thailand/NIC_BKK_7322/2023 | A | 480 | C | 52 | 20230704 |
| EPI_ISL_18115498 | NSP3 | hCoV-19/Thailand/NIC_BKK_7322/2023 | V | 481 | C | 50 | 20230704 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | V | 481 | W | 5 | 20230213 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | V | 481 | insW | 2 | 20220118 |
| EPI_ISL_4743648 | NSP3 | hCoV-19/India/MH-IISER-Pune-IP02230/2021 | V | 481 | insVSTLQGCFNCCGstopHSPR | 2 | 20210812 |
| EPI_ISL_17089353 | NSP3 | hCoV-19/USA/ID-IBL-875716/2023 | V | 481 | I | 17 | 20230213 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 481 | R | 1 | 20230412 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | V | 481 | A | 40 | 20230217 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 481 | del | 42 | 20231218 |
| EPI_ISL_13714578 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-104/2022 | V | 481 | Y | 8 | 20220629 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | V | 481 | F | 2 | 20210313 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | V | 481 | insG | 1 | 20210801 |
| EPI_ISL_19618728 | NSP3 | hCoV-19/Hungary/102047-UPL24-005012/2024 | V | 481 | L | 2386 | 20240923 |
| EPI_ISL_2223518 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-40336/2020 | V | 481 | G | 2 | 20200805 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | V | 481 | stop | 2 | 20211006 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | V | 481 | D | 1 | 20200805 |
| EPI_ISL_11204010 | NSP3 | hCoV-19/USA/NY-SUNYQB-61210550205603/2022 | V | 481 | M | 7 | 20220211 |
| EPI_ISL_12319518 | NSP3 | hCoV-19/Turkey/HSGM-G8312/2022 | V | 481 | E | 4 | 20220312 |
| EPI_ISL_5934824 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689492_CAM_IZSM_COLLI_TIGEM/2021 | V | 481 | S | 5 | 20211015 |
| EPI_ISL_11023737 | NSP3 | hCoV-19/Turkey/HSGM-G2215/2022 | V | 481 | K | 1 | 20220217 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | V | 481 | T | 1 | 20230217 |
| EPI_ISL_17467343 | NSP3 | hCoV-19/India/DL-ILBS-8570/2023 | V | 482 | insLALSKGVLTAVV | 9 | 20230401 |
| EPI_ISL_15544313 | NSP3 | hCoV-19/Nigeria/NCDC-NR-GL-006479/2022 | V | 482 | insLALSKGVLTAVVLALSKGVLTAVV | 3 | 20221005 |
| EPI_ISL_19572932 | NSP3 | hCoV-19/South Korea/KDCA296398/2024 | V | 482 | G | 48 | 20241104 |
| EPI_ISL_13377418 | NSP3 | hCoV-19/India/KA-RFNB-3529/2021 | V | 482 | insTRLLALSKGVLTAVV | 1 | 20211223 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | V | 482 | T | 6 | 20221222 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | V | 482 | F | 7 | 20230116 |
| EPI_ISL_13392909 | NSP3 | hCoV-19/USA/LA-OD-D-1782281073/2022 | V | 482 | D | 3 | 20220614 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | V | 482 | del | 48 | 20231218 |
| EPI_ISL_10682367 | NSP3 | hCoV-19/Sweden/6215881276/2022 | V | 482 | insT | 21 | 20220218 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 482 | H | 1 | 20220210 |
| EPI_ISL_13346222 | NSP3 | hCoV-19/USA/ID-IBL-824806/2022 | V | 482 | Y | 5 | 20220601 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | V | 482 | stop | 2 | 20230213 |
| EPI_ISL_19150875 | NSP3 | hCoV-19/Japan/FR302-0507/2024 | V | 482 | A | 192 | 20240402 |
| EPI_ISL_11346324 | NSP3 | hCoV-19/India/MN-IBSD-IE-P14-169/2022 | V | 482 | insLALSKG | 9 | 20220203 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | V | 482 | W | 94 | 20230401 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | V | 482 | I | 6 | 20220630 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | V | 482 | N | 12 | 20230217 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | V | 482 | S | 2 | 20211006 |
| EPI_ISL_3403693 | NSP3 | hCoV-19/Sweden/2878113663/2021 | V | 482 | insTSTLQGCFNCCGYstopHSPRVFstopLLW | 1 | 20210714 |
| EPI_ISL_7870657 | NSP3 | hCoV-19/India/MH-RFIP05101/2021 | V | 482 | insSTLQGCFNCCGstopHSPR | 4 | 20211019 |
| EPI_ISL_11055011 | NSP3 | hCoV-19/India/HP-NCDC-5409179/2021 | V | 482 | insPLALS | 1 | 20210816 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | V | 482 | C | 2 | 20220630 |
| EPI_ISL_9180290 | NSP3 | hCoV-19/Sweden/1575488264/2022 | V | 482 | insTSTLQGCFNCCG | 1 | 20220113 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | V | 482 | L | 55 | 20230412 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | I | 483 | P | 1 | 20210424 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | I | 483 | C | 2 | 20230213 |
| EPI_ISL_19745249 | NSP3 | hCoV-19/USA/LA-EVTL23508/2025 | I | 483 | V | 1603 | 20250205 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | I | 483 | stop | 21 | 20220630 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | I | 483 | E | 1 | 20221229 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | I | 483 | S | 8 | 20220210 |
| EPI_ISL_8803763 | NSP3 | hCoV-19/India/GA-NCCS-C59252/2021 | I | 483 | W | 1 | 20210722 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | I | 483 | A | 2 | 20230412 |
| EPI_ISL_15157265 | NSP3 | hCoV-19/India/MH-NCCS-2750000428333/2021 | I | 483 | N | 7 | 20211201 |
| EPI_ISL_18115498 | NSP3 | hCoV-19/Thailand/NIC_BKK_7322/2023 | I | 483 | Y | 63 | 20230704 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | I | 483 | F | 9 | 20221222 |
| EPI_ISL_14071663 | NSP3 | hCoV-19/Israel/ICH-741177026/2022 | I | 483 | T | 199 | 20220718 |
| EPI_ISL_19331278 | NSP3 | hCoV-19/Nigeria/NCDC-NRL-GL-00596/2024 | I | 483 | L | 342 | 20240605 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | I | 483 | M | 9 | 20220630 |
| EPI_ISL_4109596 | NSP3 | hCoV-19/Italy/CAM-RD20702443782/2021 | I | 483 | D | 1 | 20210825 |
| EPI_ISL_17527081 | NSP3 | hCoV-19/Sweden/UUH-290312/2023 | I | 483 | insI | 2 | 20230109 |
| EPI_ISL_14570223 | NSP3 | hCoV-19/Finland/THL-202216699/2022 | I | 483 | R | 3 | 20220729 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | I | 483 | del | 76 | 20230905 |
| EPI_ISL_11526423 | NSP3 | hCoV-19/Peru/LIM-INS-15470/2022 | I | 483 | J | 4 | 20220220 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | I | 483 | K | 5 | 20240123 |
| EPI_ISL_14366976 | NSP3 | hCoV-19/India/MH-NCCS-526417/2022 | P | 484 | N | 29 | 20220107 |
| EPI_ISL_7793476 | NSP3 | hCoV-19/South Korea/KDCA20522/2021 | P | 484 | G | 4 | 20211113 |
| EPI_ISL_13346223 | NSP3 | hCoV-19/USA/ID-IBL-824807/2022 | P | 484 | insIWstop | 1 | 20220601 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | P | 484 | I | 2 | 20220128 |
| EPI_ISL_18060913 | NSP3 | hCoV-19/USA/UT-UPHL-221209117998/2022 | P | 484 | S | 40 | 20221123 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | P | 484 | K | 7 | 20230412 |
| EPI_ISL_17548390 | NSP3 | hCoV-19/India/DL-ILBS-9347/2023 | P | 484 | A | 51 | 20230404 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | P | 484 | R | 5 | 20240123 |
| EPI_ISL_15157259 | NSP3 | hCoV-19/India/MH-NCCS-2749002259158/2021 | P | 484 | insL | 1 | 20211207 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | P | 484 | C | 3 | 20230213 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 484 | F | 1 | 20210318 |
| EPI_ISL_18301815 | NSP3 | hCoV-19/Italy/LOM-69468829/2023 | P | 484 | T | 205 | 20230914 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | P | 484 | del | 68 | 20230905 |
| EPI_ISL_12955747 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733749151/2022 | P | 484 | V | 1 | 20220227 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | P | 484 | L | 54 | 20221222 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 484 | E | 1 | 20220210 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | P | 484 | Y | 88 | 20230401 |
| EPI_ISL_10834531 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91353/2022 | P | 484 | H | 6 | 20220214 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | P | 484 | Q | 4 | 20221229 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | T | 485 | del | 82 | 20231216 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | T | 485 | V | 1 | 20221229 |
| EPI_ISL_8882748 | NSP3 | hCoV-19/India/GA-NCCS-3055200150088/2021 | T | 485 | H | 1 | 20210710 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | T | 485 | K | 8 | 20231218 |
| EPI_ISL_15292749 | NSP3 | hCoV-19/India/GA-NCCS-3055200226533/2021 | T | 485 | insL | 2 | 20211223 |
| EPI_ISL_18115498 | NSP3 | hCoV-19/Thailand/NIC_BKK_7322/2023 | T | 485 | Y | 52 | 20230704 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | T | 485 | P | 2 | 20220128 |
| EPI_ISL_19259880 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA11105-P0/2024 | T | 485 | S | 34 | 20240609 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 485 | F | 3 | 20210424 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | T | 485 | W | 1 | 20220630 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | T | 485 | C | 3 | 20220630 |
| EPI_ISL_19440872 | NSP3 | hCoV-19/Brazil/RJ-FIOCRUZ-10459/2024 | T | 485 | N | 71 | 20240906 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 485 | L | 180 | 20240123 |
| EPI_ISL_13346221 | NSP3 | hCoV-19/USA/ID-IBL-824804/2022 | T | 485 | stop | 15 | 20220601 |
| EPI_ISL_19431389 | NSP3 | hCoV-19/Greece/PHLnetwork_3259/2024 | T | 485 | A | 54 | 20240621 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | T | 485 | D | 4 | 20230410 |
| EPI_ISL_13714578 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-104/2022 | T | 485 | R | 1 | 20220629 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 485 | I | 1279 | 20250116 |
| EPI_ISL_19348703 | NSP3 | hCoV-19/Morocco/29/2020 | K | 486 | insNVYL | 2 | 20200909 |
| EPI_ISL_19646478 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000653201/2024 | K | 486 | R | 23 | 20241210 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | K | 486 | H | 1 | 20211006 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | K | 486 | W | 2 | 20220630 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | K | 486 | L | 70 | 20230412 |
| EPI_ISL_13346223 | NSP3 | hCoV-19/USA/ID-IBL-824807/2022 | K | 486 | C | 2 | 20220601 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | K | 486 | T | 7 | 20220630 |
| EPI_ISL_7652887 | NSP3 | hCoV-19/Switzerland/BL-ETHZ-35053140/2021 | K | 486 | E | 1 | 20211201 |
| EPI_ISL_8138203 | NSP3 | hCoV-19/India/MH-RFIP05273/2021 | K | 486 | Q | 7 | 20211115 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | K | 486 | del | 60 | 20231218 |
| EPI_ISL_18115498 | NSP3 | hCoV-19/Thailand/NIC_BKK_7322/2023 | K | 486 | stop | 56 | 20230704 |
| EPI_ISL_12694388 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471253/2022 | K | 486 | insVWW | 2 | 20220126 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 486 | F | 1 | 20220210 |
| EPI_ISL_8138203 | NSP3 | hCoV-19/India/MH-RFIP05273/2021 | K | 486 | insGCFNCCGstopHSPRVXXXX | 3 | 20211115 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | K | 486 | V | 4 | 20230412 |
| EPI_ISL_7228771 | NSP3 | hCoV-19/USA/UT-CDC-ASC210520774/2021 | K | 486 | Y | 3 | 20211103 |
| EPI_ISL_8806277 | NSP3 | hCoV-19/India/MH-NCCS-2748700641521/2021 | K | 486 | N | 4 | 20211016 |
| EPI_ISL_17548390 | NSP3 | hCoV-19/India/DL-ILBS-9347/2023 | K | 486 | S | 54 | 20230404 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | K | 486 | A | 5 | 20240123 |
| EPI_ISL_12319900 | NSP3 | hCoV-19/Turkey/HSGM-GS1500/2022 | K | 486 | I | 5 | 20220401 |
| EPI_ISL_19059794 | NSP3 | hCoV-19/Japan/FR302-0274/2024 | K | 487 | E | 12 | 20240311 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | K | 487 | G | 10 | 20230412 |
| EPI_ISL_19804310 | NSP3 | hCoV-19/USA/NY-Wadsworth-25024882-01/2025 | K | 487 | R | 853 | 20250318 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 487 | D | 7 | 20221229 |
| EPI_ISL_12175389 | NSP3 | hCoV-19/Russia/SMO-CRIE-S_7720494916/2022 | K | 487 | stop | 2 | 20220111 |
| EPI_ISL_18342386 | NSP3 | hCoV-19/Japan/PG-570046/2023 | K | 487 | T | 26 | 20230823 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | K | 487 | L | 6 | 20230213 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 487 | F | 1 | 20220210 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | K | 487 | del | 67 | 20231218 |
| EPI_ISL_17798934 | NSP3 | hCoV-19/Canada/BC-BCCDC-632835/2023 | K | 487 | M | 15 | 20230523 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | K | 487 | W | 1 | 20211015 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | K | 487 | H | 15 | 20230217 |
| EPI_ISL_13714578 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-104/2022 | K | 487 | V | 12 | 20220629 |
| EPI_ISL_13346206 | NSP3 | hCoV-19/USA/ID-IBL-824087/2022 | K | 487 | A | 1 | 20220531 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | K | 487 | insLVAL | 1 | 20210806 |
| EPI_ISL_18424684 | NSP3 | hCoV-19/Spain/GU-GUT-85673264/2023 | K | 487 | Q | 28 | 20230918 |
| EPI_ISL_19819683 | NSP3 | hCoV-19/Singapore/Y25R14MSC107/2025 | K | 487 | N | 2431 | 20250327 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | K | 487 | S | 6 | 20230217 |
| EPI_ISL_13871246 | NSP3 | hCoV-19/USA/ID-IBL-833303/2022 | A | 488 | Y | 105 | 20220630 |
| EPI_ISL_6937668 | NSP3 | hCoV-19/India/MH-RFIP04146/2021 | A | 488 | insFNCCGstopHSPRVXXXXXX | 2 | 20210527 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 488 | C | 11 | 20230108 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | A | 488 | del | 111 | 20231218 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | A | 488 | H | 2 | 20211015 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | A | 488 | P | 5 | 20230217 |
| EPI_ISL_19807314 | NSP3 | hCoV-19/Canada/ON-PHL-202503876/2025 | A | 488 | S | 2571876 | 20250208 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | A | 488 | E | 3 | 20230412 |
| EPI_ISL_19752851 | NSP3 | hCoV-19/Brazil/AC-IEC-002396/2024 | A | 488 | T | 1125 | 20241221 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | A | 488 | R | 37 | 20230401 |
| EPI_ISL_17425896 | NSP3 | hCoV-19/India/MH-CSIR-2903/2023 | A | 488 | L | 60 | 20230401 |
| EPI_ISL_17989383 | NSP3 | hCoV-19/Nepal/NPHL-S-2489/2023 | A | 488 | G | 56 | 20230402 |
| EPI_ISL_8481515 | NSP3 | hCoV-19/Greece/V5463/2021 | A | 488 | insVLT | 1 | 20211206 |
| EPI_ISL_11066179 | NSP3 | hCoV-19/India/MP-NCDC-8309177/2022 | A | 488 | insVLTAVVXXXKXX | 1 | 20220201 |
| EPI_ISL_19808343 | NSP3 | hCoV-19/Canada/ON-PHL-202504702/2025 | A | 488 | V | 366 | 20250304 |
| EPI_ISL_19598784 | NSP3 | hCoV-19/Portugal/PT52282/2024 | A | 488 | D | 158 | 20241108 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | A | 488 | I | 2 | 20230410 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 488 | insstopWHY | 2 | 20230101 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | A | 488 | K | 2 | 20220128 |
| EPI_ISL_16408485 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-11-28/2022 | A | 488 | F | 738 | 20221112 |
| EPI_ISL_13346216 | NSP3 | hCoV-19/USA/ID-IBL-824330/2022 | A | 488 | W | 10 | 20220601 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | G | 489 | L | 36 | 20240123 |
| EPI_ISL_13346206 | NSP3 | hCoV-19/USA/ID-IBL-824087/2022 | G | 489 | A | 88 | 20220531 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | G | 489 | T | 4 | 20230412 |
| EPI_ISL_19833200 | NSP3 | hCoV-19/Poland/Kce-46/2025 | G | 489 | S | 4297603 | 20250411 |
| EPI_ISL_12934141 | NSP3 | hCoV-19/USA/OR-TRACE-WASH-061120-1354/2020 | G | 489 | insWWHYstop | 1 | 20200611 |
| EPI_ISL_19637753 | NSP3 | hCoV-19/Russia/TA-RII-MH214642S/2024 | G | 489 | N | 962 | 20241114 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | G | 489 | insRWHYstop | 1 | 20200807 |
| EPI_ISL_18912920 | NSP3 | hCoV-19/India/TS-CDFD-SR-342/2024 | G | 489 | I | 10 | 20240101 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 489 | Y | 3 | 20220210 |
| EPI_ISL_17989383 | NSP3 | hCoV-19/Nepal/NPHL-S-2489/2023 | G | 489 | stop | 9 | 20230402 |
| EPI_ISL_17425896 | NSP3 | hCoV-19/India/MH-CSIR-2903/2023 | G | 489 | V | 176 | 20230401 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | G | 489 | Q | 1 | 20230412 |
| EPI_ISL_13829410 | NSP3 | hCoV-19/USA/ID-IBL-833870/2022 | G | 489 | W | 45 | 20220701 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | G | 489 | K | 4 | 20230410 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | G | 489 | insWHYstop | 3 | 20221201 |
| EPI_ISL_18712780 | NSP3 | hCoV-19/Slovenia/IMI-V0-20826/2023 | G | 489 | R | 28 | 20231208 |
| EPI_ISL_12999183 | NSP3 | hCoV-19/Chile/TA-62523/2022 | G | 489 | P | 3 | 20220518 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | G | 489 | del | 135 | 20231218 |
| EPI_ISL_13829410 | NSP3 | hCoV-19/USA/ID-IBL-833870/2022 | G | 489 | insHYstop | 12 | 20220701 |
| EPI_ISL_17803949 | NSP3 | hCoV-19/England/PHEC-YYE41OO/2023 | G | 489 | C | 103 | 20230525 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | G | 489 | D | 97 | 20230217 |
| EPI_ISL_17831502 | NSP3 | hCoV-19/Russia/MOW-PMVL-OM0223620/2023 | G | 490 | S | 165 | 20230516 |
| EPI_ISL_14552479 | NSP3 | hCoV-19/USA/TX-HMH-M-111686/2022 | G | 490 | W | 33 | 20220809 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 490 | N | 26 | 20230101 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | G | 490 | I | 1 | 20221229 |
| EPI_ISL_4462816 | NSP3 | hCoV-19/India/HP-NCDC-4209332/2021 | G | 490 | insXXXXXXXX | 1 | 20210611 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | G | 490 | stop | 2 | 20211015 |
| EPI_ISL_19719077 | NSP3 | hCoV-19/env/Germany/BY-LGL-6467982/2025 | G | 490 | D | 54 | 20250115 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | G | 490 | V | 52 | 20230412 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | G | 490 | insG | 1 | 20220128 |
| EPI_ISL_17704451 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0240-Dd/2023 | G | 490 | Q | 4 | 20230425 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | G | 490 | T | 3 | 20230412 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | G | 490 | del | 134 | 20231218 |
| EPI_ISL_17467254 | NSP3 | hCoV-19/India/DL-ILBS-8456/2023 | G | 490 | L | 6 | 20230330 |
| EPI_ISL_19764443 | NSP3 | hCoV-19/Spain/AS-HUCA-232515422/2025 | G | 490 | C | 175 | 20250221 |
| EPI_ISL_8256169 | NSP3 | hCoV-19/France/BFC-HMN-21122150394/2021 | G | 490 | R | 1 | 20211206 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | G | 490 | H | 1 | 20210806 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | G | 490 | M | 2 | 20240123 |
| EPI_ISL_10832916 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83228/2022 | G | 490 | insYstopN | 3 | 20220119 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | G | 490 | A | 60 | 20230410 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 490 | Y | 2 | 20230108 |
| EPI_ISL_15757487 | NSP3 | hCoV-19/Denmark/DCGC-609065/2022 | T | 491 | N | 29 | 20221106 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | T | 491 | C | 2 | 20230410 |
| EPI_ISL_8806976 | NSP3 | hCoV-19/India/GA-NCCS-212670240/2021 | T | 491 | W | 4 | 20210924 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | T | 491 | stop | 1 | 20220630 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | T | 491 | insYstopR | 1 | 20220124 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | T | 491 | V | 14 | 20230412 |
| EPI_ISL_14552479 | NSP3 | hCoV-19/USA/TX-HMH-M-111686/2022 | T | 491 | H | 35 | 20220809 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | T | 491 | del | 175 | 20231218 |
| EPI_ISL_18544094 | NSP3 | hCoV-19/Japan/PG-583086/2023 | T | 491 | I | 6 | 20231107 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 491 | E | 2 | 20240123 |
| EPI_ISL_17425896 | NSP3 | hCoV-19/India/MH-CSIR-2903/2023 | T | 491 | L | 16 | 20230401 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | T | 491 | Y | 3 | 20221229 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 491 | M | 1 | 20210424 |
| EPI_ISL_13112715 | NSP3 | hCoV-19/Turkey/HSGM-IST-00088/2022 | T | 491 | S | 75 | 20220415 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | T | 491 | R | 6 | 20230401 |
| EPI_ISL_12145118 | NSP3 | hCoV-19/Turkey/HSGM-3GS1272/2022 | T | 491 | D | 2 | 20220312 |
| EPI_ISL_12319508 | NSP3 | hCoV-19/Turkey/HSGM-3GS1302/2022 | T | 491 | P | 3 | 20220312 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | T | 491 | A | 144 | 20230415 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | T | 491 | Q | 1 | 20211015 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | T | 491 | G | 2 | 20230412 |
| EPI_ISL_17349581 | NSP3 | hCoV-19/India/KA-VRDL-125880/2023 | T | 491 | K | 1 | 20230210 |
| EPI_ISL_8806976 | NSP3 | hCoV-19/India/GA-NCCS-212670240/2021 | T | 492 | W | 4 | 20210924 |
| EPI_ISL_17714991 | NSP3 | hCoV-19/India/UP-MRU-ICMR-66/2023 | T | 492 | L | 112 | 20230419 |
| EPI_ISL_19552175 | NSP3 | hCoV-19/USA/CT-DPH-1253679001/2024 | T | 492 | I | 1135 | 20241006 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | T | 492 | del | 118 | 20231218 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | T | 492 | V | 6 | 20230410 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 492 | Y | 37 | 20230108 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | T | 492 | C | 1 | 20210525 |
| EPI_ISL_17349581 | NSP3 | hCoV-19/India/KA-VRDL-125880/2023 | T | 492 | N | 7 | 20230210 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | T | 492 | P | 5 | 20221229 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 492 | stop | 3 | 20221226 |
| EPI_ISL_19261608 | NSP3 | hCoV-19/Spain/MD-HULP-200135706/2024 | T | 492 | A | 29 | 20240625 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | T | 492 | D | 2 | 20230412 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | T | 492 | R | 1 | 20210806 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | T | 492 | M | 2 | 20220630 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | T | 492 | S | 38 | 20230412 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 493 | S | 2 | 20220210 |
| EPI_ISL_18544094 | NSP3 | hCoV-19/Japan/PG-583086/2023 | E | 493 | stop | 41 | 20231107 |
| EPI_ISL_19519098 | NSP3 | hCoV-19/USA/NY-PRL-241022_83H12/2024 | E | 493 | D | 61 | 20241004 |
| EPI_ISL_8806976 | NSP3 | hCoV-19/India/GA-NCCS-212670240/2021 | E | 493 | H | 4 | 20210924 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | E | 493 | del | 114 | 20231216 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | E | 493 | R | 1 | 20221226 |
| EPI_ISL_19431416 | NSP3 | hCoV-19/Greece/PHLnetwork_3327/2024 | E | 493 | V | 71 | 20240626 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | E | 493 | M | 1 | 20210424 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | E | 493 | T | 2 | 20240123 |
| EPI_ISL_19693307 | NSP3 | hCoV-19/USA/NY-UM-G25X81O7/2024 | E | 493 | A | 1077 | 20241209 |
| EPI_ISL_15955430 | NSP3 | hCoV-19/Germany/BY-LGL-IMS-10272-CVDP-9fc4035e-44fc-43a6-9df9-2b7f73d41ec4/2022 | E | 493 | N | 5 | 20221110 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 493 | I | 1 | 20210318 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | E | 493 | L | 35 | 20230401 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 493 | C | 1 | 20211006 |
| EPI_ISL_19453408 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-1812-8546/2024 | E | 493 | G | 1106 | 20240909 |
| EPI_ISL_9314178 | NSP3 | hCoV-19/England/BRBR-340984E/2022 | E | 493 | Z | 4 | 20220124 |
| EPI_ISL_13636575 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS_22_06411/2022 | E | 493 | Q | 7 | 20220624 |
| EPI_ISL_18417716 | NSP3 | hCoV-19/Ireland/G-LUH-N1859/2023 | E | 493 | K | 101 | 20231007 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | E | 493 | Y | 4 | 20221222 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | E | 493 | F | 2 | 20220804 |
| EPI_ISL_17714991 | NSP3 | hCoV-19/India/UP-MRU-ICMR-66/2023 | M | 494 | A | 84 | 20230419 |
| EPI_ISL_19821878 | NSP3 | hCoV-19/USA/NY-CDC-LC1136281/2025 | M | 494 | I | 4811 | 20250326 |
| EPI_ISL_8177993 | NSP3 | hCoV-19/USA/NY-SUNYQB-61210353816852/2021 | M | 494 | P | 2 | 20211127 |
| EPI_ISL_19275089 | NSP3 | hCoV-19/New Zealand/24YA5475/2024 | M | 494 | L | 130 | 20240622 |
| EPI_ISL_17425896 | NSP3 | hCoV-19/India/MH-CSIR-2903/2023 | M | 494 | C | 16 | 20230401 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | M | 494 | S | 36 | 20230101 |
| EPI_ISL_17467254 | NSP3 | hCoV-19/India/DL-ILBS-8456/2023 | M | 494 | Y | 10 | 20230330 |
| EPI_ISL_19037139 | NSP3 | hCoV-19/Brunei/MGS-7124002665/2024 | M | 494 | V | 730 | 20240112 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | M | 494 | D | 3 | 20221229 |
| EPI_ISL_14552479 | NSP3 | hCoV-19/USA/TX-HMH-M-111686/2022 | M | 494 | N | 39 | 20220809 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | M | 494 | Q | 1 | 20211006 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | M | 494 | E | 4 | 20231218 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | M | 494 | del | 110 | 20231216 |
| EPI_ISL_19416939 | NSP3 | hCoV-19/USA/UT-UPHL-240913703449/2024 | M | 494 | T | 67 | 20240904 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 494 | W | 1 | 20220210 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | M | 494 | G | 1 | 20240123 |
| EPI_ISL_8806976 | NSP3 | hCoV-19/India/GA-NCCS-212670240/2021 | M | 494 | insstopN | 4 | 20210924 |
| EPI_ISL_18082985 | NSP3 | hCoV-19/Japan/PG-554198/2023 | M | 494 | K | 83 | 20230724 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | M | 494 | R | 25 | 20221226 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | M | 494 | insNG | 1 | 20230217 |
| EPI_ISL_14248289 | NSP3 | hCoV-19/Israel/ICH-741179475/2022 | L | 495 | P | 4 | 20220721 |
| EPI_ISL_1202493 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-16783/2020 | L | 495 | J | 2 | 20201106 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 495 | F | 28 | 20230101 |
| EPI_ISL_16408485 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-11-28/2022 | L | 495 | T | 3 | 20221112 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | L | 495 | G | 1 | 20240123 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | L | 495 | Y | 2 | 20230217 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 495 | R | 6 | 20230108 |
| EPI_ISL_18936217 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00067/2023 | L | 495 | stop | 17 | 20230412 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | L | 495 | C | 35 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 495 | E | 2 | 20220210 |
| EPI_ISL_15005651 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1112/2021 | L | 495 | S | 2 | 20211009 |
| EPI_ISL_19242365 | NSP3 | hCoV-19/Yunnan/YNCDC-1087/2024 | L | 495 | Q | 4 | 20240506 |
| EPI_ISL_17050985 | NSP3 | hCoV-19/Puerto Rico/RCMI-PRI69617/2022 | L | 495 | A | 44 | 20221107 |
| EPI_ISL_10469955 | NSP3 | hCoV-19/USA/CA-CDC-ASC210857662/2022 | L | 495 | insD | 1 | 20220214 |
| EPI_ISL_18792033 | NSP3 | hCoV-19/South Korea/KDCA281712/2023 | L | 495 | V | 9 | 20231218 |
| EPI_ISL_17988442 | NSP3 | hCoV-19/Spain/GA-SCQ-178930/2023 | L | 495 | I | 16 | 20230508 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 495 | K | 9 | 20221229 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | L | 495 | insS | 1 | 20220804 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | L | 495 | del | 63 | 20231216 |
| EPI_ISL_19650420 | NSP3 | hCoV-19/France/IDF-RELAB-IPP14752/2024 | A | 496 | S | 473 | 20241212 |
| EPI_ISL_17714991 | NSP3 | hCoV-19/India/UP-MRU-ICMR-66/2023 | A | 496 | L | 126 | 20230419 |
| EPI_ISL_19566657 | NSP3 | hCoV-19/Italy/LOM_Niguarda_45174677CAP/2024 | A | 496 | G | 15 | 20241104 |
| EPI_ISL_18959801 | NSP3 | hCoV-19/Colombia/DC-LSPSDS-43140/2023 | A | 496 | M | 2 | 20231013 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | A | 496 | stop | 36 | 20230401 |
| EPI_ISL_19738864 | NSP3 | hCoV-19/USA/VA-VCUVAS3-LCYT055555/2025 | A | 496 | T | 2735 | 20250210 |
| EPI_ISL_14288014 | NSP3 | hCoV-19/USA/ID-IBL-839519/2022 | A | 496 | C | 2 | 20220721 |
| EPI_ISL_18419741 | NSP3 | hCoV-19/Spain/MC-HCUVA-39478777/2023 | A | 496 | E | 67 | 20230912 |
| EPI_ISL_17425896 | NSP3 | hCoV-19/India/MH-CSIR-2903/2023 | A | 496 | R | 17 | 20230401 |
| EPI_ISL_19806155 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YFQIA/2025 | A | 496 | V | 8897 | 20250303 |
| EPI_ISL_16408485 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-11-28/2022 | A | 496 | F | 1 | 20221112 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | A | 496 | Y | 3 | 20230412 |
| EPI_ISL_15709476 | NSP3 | hCoV-19/env/USA/CA-SEARCH-91327/2022 | A | 496 | P | 10 | 20220521 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 496 | D | 1 | 20220210 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | A | 496 | K | 5 | 20230401 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | A | 496 | H | 1 | 20210526 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | A | 496 | N | 13 | 20230217 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 496 | del | 72 | 20250116 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | A | 496 | I | 1 | 20210313 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | K | 497 | P | 1 | 20230412 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | K | 497 | L | 6 | 20240708 |
| EPI_ISL_16408485 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-11-28/2022 | K | 497 | stop | 1 | 20221112 |
| EPI_ISL_19499651 | NSP3 | hCoV-19/USA/TX-HMH-M-146258/2024 | K | 497 | N | 35 | 20240909 |
| EPI_ISL_11227629 | NSP3 | hCoV-19/USA/NY-PRL-2022_0309_00H21/2022 | K | 497 | I | 21 | 20220307 |
| EPI_ISL_17813682 | NSP3 | hCoV-19/Cabo Verde/BR-0002/2023 | K | 497 | E | 80 | 20230510 |
| EPI_ISL_19599109 | NSP3 | hCoV-19/USA/CA-CDPH-500144108/2024 | K | 497 | Q | 84 | 20241007 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | K | 497 | D | 3 | 20221222 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | K | 497 | C | 2 | 20230401 |
| EPI_ISL_4298391 | NSP3 | hCoV-19/USA/AK-PHL11490/2021 | K | 497 | A | 1 | 20210812 |
| EPI_ISL_17427529 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2855/2023 | K | 497 | S | 11 | 20230401 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | K | 497 | T | 124 | 20241226 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 497 | del | 76 | 20250116 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 497 | V | 1 | 20230108 |
| EPI_ISL_19832992 | NSP3 | hCoV-19/Japan/FR032-0069/2025 | K | 497 | R | 599 | 20250213 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | A | 498 | T | 100 | 20230410 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | A | 498 | M | 1 | 20220804 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 498 | D | 1 | 20220210 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | A | 498 | R | 5 | 20241226 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | A | 498 | stop | 1 | 20230401 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | A | 498 | del | 67 | 20231216 |
| EPI_ISL_19317677 | NSP3 | hCoV-19/USA/TX-HMH-M-142123/2024 | A | 498 | V | 607 | 20240707 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 498 | F | 3 | 20221229 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | A | 498 | L | 12 | 20230214 |
| EPI_ISL_3636272 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ13948/2021 | A | 498 | G | 1 | 20210806 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 498 | K | 41 | 20250116 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | A | 498 | N | 1 | 20210526 |
| EPI_ISL_18673729 | NSP3 | hCoV-19/Netherlands/NB-MVD-2300819/2023 | A | 498 | S | 324 | 20231214 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | A | 498 | insstopK | 1 | 20230401 |
| EPI_ISL_17714991 | NSP3 | hCoV-19/India/UP-MRU-ICMR-66/2023 | A | 498 | C | 122 | 20230419 |
| EPI_ISL_1195059 | NSP3 | hCoV-19/Switzerland/SO-ETHZ-510281/2021 | A | 498 | P | 2 | 20210220 |
| EPI_ISL_12152766 | NSP3 | hCoV-19/Russia/TAM-CRIE-S_7720153318/2022 | L | 499 | W | 3 | 20220112 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 499 | V | 17 | 20241226 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | L | 499 | insstop | 1 | 20210805 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 499 | I | 1 | 20220210 |
| EPI_ISL_19756609 | NSP3 | hCoV-19/Liaoning/LNCDC-032/2025 | L | 499 | F | 395 | 20250214 |
| EPI_ISL_19650721 | NSP3 | hCoV-19/Sweden/S-1261032619VN/2024 | L | 499 | M | 24 | 20241209 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | L | 499 | del | 62 | 20231216 |
| EPI_ISL_13871231 | NSP3 | hCoV-19/USA/ID-IBL-833146/2022 | L | 499 | Q | 3 | 20220630 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 499 | D | 1 | 20230412 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | L | 499 | S | 13 | 20240708 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | L | 499 | insQ | 1 | 20210803 |
| EPI_ISL_18987895 | NSP3 | hCoV-19/env/Germany/BY-LGL-6166878/2024 | L | 499 | stop | 139 | 20240221 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 499 | A | 26 | 20230101 |
| EPI_ISL_17591988 | NSP3 | hCoV-19/Nepal/NPHL-S-2441/2023 | L | 499 | E | 9 | 20230322 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | L | 499 | N | 2 | 20220720 |
| EPI_ISL_12223838 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0830/2022 | L | 499 | G | 2 | 20220112 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | L | 499 | T | 14 | 20240123 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | R | 500 | insNAM | 12 | 20230217 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | R | 500 | A | 3 | 20240708 |
| EPI_ISL_18430624 | NSP3 | hCoV-19/USA/GA-CDC-LC1065266/2023 | R | 500 | I | 159 | 20231009 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | R | 500 | N | 41 | 20230217 |
| EPI_ISL_19829180 | NSP3 | hCoV-19/USA/PA-CDC-LC1136606/2025 | R | 500 | K | 593 | 20250402 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | R | 500 | Q | 13 | 20221222 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | R | 500 | del | 61 | 20231216 |
| EPI_ISL_19670530 | NSP3 | hCoV-19/USA/IL-RIPHL_81541_G/2024 | R | 500 | G | 641 | 20241203 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | R | 500 | P | 2 | 20240123 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | R | 500 | C | 1 | 20250116 |
| EPI_ISL_17427529 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2855/2023 | R | 500 | stop | 40 | 20230401 |
| EPI_ISL_19622386 | NSP3 | hCoV-19/USA/NY-CUIMC-NP-17761/2024 | R | 500 | S | 58 | 20240806 |
| EPI_ISL_17955580 | NSP3 | hCoV-19/USA/TX-HMH-129590/2023 | R | 500 | E | 87 | 20230623 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | R | 500 | T | 6 | 20220804 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | R | 500 | L | 2 | 20230108 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | R | 500 | insET | 2 | 20230410 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 501 | A | 2 | 20250116 |
| EPI_ISL_19732976 | NSP3 | hCoV-19/Canada/ON-PHL-202503803/2025 | K | 501 | N | 202 | 20250212 |
| EPI_ISL_19459323 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16243/2024 | K | 501 | S | 13 | 20240528 |
| EPI_ISL_4298391 | NSP3 | hCoV-19/USA/AK-PHL11490/2021 | K | 501 | C | 2 | 20210812 |
| EPI_ISL_10549849 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-MI.22.12745/2022 | K | 501 | H | 1 | 20220202 |
| EPI_ISL_19781269 | NSP3 | hCoV-19/Italy/VEN-IZSVe-25RS8005-5_PD/2025 | K | 501 | R | 234 | 20250211 |
| EPI_ISL_2801523 | NSP3 | hCoV-19/USA/OR-OSPHL01077/2021 | K | 501 | insQLYNH | 1 | 20210623 |
| EPI_ISL_19303519 | NSP3 | hCoV-19/USA/TN-UM-L3534584393358/2024 | K | 501 | E | 505 | 20240711 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | K | 501 | del | 58 | 20231216 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | K | 501 | insG | 3 | 20221222 |
| EPI_ISL_18924147 | NSP3 | hCoV-19/South Korea/KDCA285272/2024 | K | 501 | T | 36 | 20240130 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 501 | W | 2 | 20220210 |
| EPI_ISL_570586 | NSP3 | hCoV-19/USA/WA-UW-22190/2020 | K | 501 | V | 1 | 20200806 |
| EPI_ISL_1703711 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-VOC-233/2020 | K | 501 | G | 1 | 20201228 |
| EPI_ISL_18912273 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EQVS479363/2023 | K | 501 | Q | 43 | 20231230 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 501 | L | 1 | 20220210 |
| EPI_ISL_13565400 | NSP3 | hCoV-19/Japan/IC-11395/2022 | K | 501 | stop | 4 | 20220527 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 501 | D | 2 | 20221229 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | K | 501 | I | 5 | 20240123 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | V | 502 | insstopE | 3 | 20220726 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 502 | Q | 2 | 20230101 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | V | 502 | insstopEKCQQTIIstop | 1 | 20210805 |
| EPI_ISL_17489740 | NSP3 | hCoV-19/Guangdong/GDCDC-ZQ0016/2023 | V | 502 | E | 6 | 20230116 |
| EPI_ISL_17955580 | NSP3 | hCoV-19/USA/TX-HMH-129590/2023 | V | 502 | S | 68 | 20230623 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 502 | L | 749 | 20250116 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | V | 502 | stop | 2 | 20211006 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 502 | I | 6 | 20221229 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | V | 502 | R | 4 | 20240708 |
| EPI_ISL_19696894 | NSP3 | hCoV-19/Tunisia/CNH-8171/2024 | V | 502 | A | 75 | 20240823 |
| EPI_ISL_18163681 | NSP3 | hCoV-19/Spain/AS-HUCA-232347416/2023 | V | 502 | M | 45 | 20230802 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | V | 502 | D | 1 | 20210526 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | V | 502 | del | 83 | 20231216 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | V | 502 | C | 12 | 20230214 |
| EPI_ISL_13346221 | NSP3 | hCoV-19/USA/ID-IBL-824804/2022 | V | 502 | insIstop | 1 | 20220601 |
| EPI_ISL_18157918 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-27356/2023 | V | 502 | G | 4 | 20230804 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 502 | P | 1 | 20220210 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | V | 502 | T | 1 | 20230217 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | V | 502 | F | 2 | 20230410 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | V | 502 | K | 8 | 20220509 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | V | 502 | insR | 1 | 20210319 |
| EPI_ISL_17162916 | NSP3 | hCoV-19/USA/ID-IBL-876977/2023 | V | 502 | insstopEK | 12 | 20230220 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 502 | N | 1 | 20230108 |
| EPI_ISL_19459323 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16243/2024 | P | 503 | N | 14 | 20240528 |
| EPI_ISL_17955580 | NSP3 | hCoV-19/USA/TX-HMH-129590/2023 | P | 503 | A | 72 | 20230623 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | P | 503 | Y | 1 | 20220720 |
| EPI_ISL_17162916 | NSP3 | hCoV-19/USA/ID-IBL-876977/2023 | P | 503 | C | 13 | 20230220 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | P | 503 | Q | 77 | 20240708 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | P | 503 | H | 1 | 20210424 |
| EPI_ISL_12890059 | NSP3 | hCoV-19/USA/CA-SEARCH-121077/2022 | P | 503 | R | 4 | 20220404 |
| EPI_ISL_11490059 | NSP3 | hCoV-19/USA/AZ-CDC-ASC210731892/2022 | P | 503 | T | 70 | 20220302 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | P | 503 | del | 70 | 20231216 |
| EPI_ISL_18064628 | NSP3 | hCoV-19/Thailand/NIC_BKK_6592/2023 | P | 503 | F | 3 | 20230609 |
| EPI_ISL_19696894 | NSP3 | hCoV-19/Tunisia/CNH-8171/2024 | P | 503 | S | 2006 | 20240823 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | P | 503 | E | 15 | 20230217 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | P | 503 | D | 1 | 20220210 |
| EPI_ISL_10728078 | NSP3 | hCoV-19/USA/PA-CDC-QDX34074072/2022 | P | 503 | V | 2 | 20220214 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | P | 503 | stop | 87 | 20230220 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | P | 503 | K | 5 | 20220804 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | P | 503 | L | 37 | 20250116 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | P | 503 | I | 1 | 20210526 |
| EPI_ISL_17162916 | NSP3 | hCoV-19/USA/ID-IBL-876977/2023 | T | 504 | Q | 21 | 20230220 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | T | 504 | C | 3 | 20220726 |
| EPI_ISL_19459323 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16243/2024 | T | 504 | R | 21 | 20240528 |
| EPI_ISL_16575556 | NSP3 | hCoV-19/Japan/22612/2021 | T | 504 | stop | 1 | 20210421 |
| EPI_ISL_19561072 | NSP3 | hCoV-19/Israel/ICH-741227067/2024 | T | 504 | K | 58 | 20241110 |
| EPI_ISL_19831976 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGD7I/2025 | T | 504 | A | 1783 | 20250321 |
| EPI_ISL_19264064 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004433726/2024 | T | 504 | S | 30 | 20240529 |
| EPI_ISL_19803233 | NSP3 | hCoV-19/env/Germany/BY-LGL-6511713/2025 | T | 504 | P | 203 | 20250305 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | T | 504 | I | 6967 | 20250329 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | T | 504 | del | 70 | 20231216 |
| EPI_ISL_17955580 | NSP3 | hCoV-19/USA/TX-HMH-129590/2023 | T | 504 | N | 71 | 20230623 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 504 | Y | 3 | 20230101 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | T | 504 | D | 7 | 20220509 |
| EPI_ISL_18953234 | NSP3 | hCoV-19/Canada/ON-KHS-01256-v1/2024 | T | 504 | V | 4 | 20240221 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | T | 504 | L | 31 | 20240708 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | T | 504 | E | 87 | 20230220 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 504 | W | 1 | 20210318 |
| EPI_ISL_18800262 | NSP3 | hCoV-19/France/HDF-IPP00079/2024 | D | 505 | E | 110 | 20240102 |
| EPI_ISL_15955430 | NSP3 | hCoV-19/Germany/BY-LGL-IMS-10272-CVDP-9fc4035e-44fc-43a6-9df9-2b7f73d41ec4/2022 | D | 505 | S | 3 | 20221110 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | D | 505 | L | 3 | 20250116 |
| EPI_ISL_19459323 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16243/2024 | D | 505 | Q | 33 | 20240528 |
| EPI_ISL_18295236 | NSP3 | hCoV-19/India/MH-ICMR-NIV-V0706/2023 | D | 505 | stop | 2 | 20230912 |
| EPI_ISL_19791384 | NSP3 | hCoV-19/Russia/SPE-RII-MH225623S/2025 | D | 505 | A | 223 | 20250207 |
| EPI_ISL_19812154 | NSP3 | hCoV-19/Germany/BY-MVP-000026254/2025 | D | 505 | B | 39 | 20250114 |
| EPI_ISL_3636272 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ13948/2021 | D | 505 | C | 1 | 20210806 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | D | 505 | del | 70 | 20231216 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | D | 505 | F | 1 | 20220804 |
| EPI_ISL_15068131 | NSP3 | hCoV-19/USA/ID-IBL-851938/2022 | D | 505 | T | 6 | 20220907 |
| EPI_ISL_17955580 | NSP3 | hCoV-19/USA/TX-HMH-129590/2023 | D | 505 | R | 67 | 20230623 |
| EPI_ISL_19770382 | NSP3 | hCoV-19/Spain/AS-HUCA-232515976/2025 | D | 505 | Y | 327 | 20250224 |
| EPI_ISL_12008683 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-598/2021 | D | 505 | H | 4 | 20211207 |
| EPI_ISL_18064628 | NSP3 | hCoV-19/Thailand/NIC_BKK_6592/2023 | D | 505 | I | 3 | 20230609 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | D | 505 | K | 87 | 20230220 |
| EPI_ISL_12308595 | NSP3 | hCoV-19/Russia/RYA-CRIE-7725530090/2022 | D | 505 | V | 3 | 20220130 |
| EPI_ISL_19826623 | NSP3 | hCoV-19/USA/NY-PRL-250408_83B01/2025 | D | 505 | N | 1140 | 20250330 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 505 | M | 1 | 20210318 |
| EPI_ISL_19822484 | NSP3 | hCoV-19/Australia/QLD0x015470/2025 | D | 505 | G | 1270 | 20250322 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | N | 506 | C | 86 | 20230220 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | N | 506 | Q | 70 | 20250116 |
| EPI_ISL_19558034 | NSP3 | hCoV-19/Canada/BC-BCCDC-750574/2024 | N | 506 | H | 63 | 20241101 |
| EPI_ISL_17711233 | NSP3 | hCoV-19/India/UP-MRU-ICMR-60/2023 | N | 506 | stop | 1 | 20230422 |
| EPI_ISL_19695358 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147389/2025 | N | 506 | D | 195 | 20250108 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | N | 506 | del | 69 | 20231216 |
| EPI_ISL_19831950 | NSP3 | hCoV-19/England/CLIMB-CM7YFAD5/2025 | N | 506 | S | 361 | 20250401 |
| EPI_ISL_19696530 | NSP3 | hCoV-19/Australia/SA2393854/2025 | N | 506 | Y | 158 | 20250115 |
| EPI_ISL_19766606 | NSP3 | hCoV-19/Canada/NL-NML-768471/2025 | N | 506 | K | 345 | 20250213 |
| EPI_ISL_19666484 | NSP3 | hCoV-19/Chile/AP-ISPC-102718/2024 | N | 506 | T | 225 | 20241223 |
| EPI_ISL_13635601 | NSP3 | hCoV-19/Denmark/DCGC-541402/2022 | N | 506 | B | 6 | 20220628 |
| EPI_ISL_19459323 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16243/2024 | N | 506 | L | 14 | 20240528 |
| EPI_ISL_18218736 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00011462/2023 | N | 506 | I | 40 | 20230612 |
| EPI_ISL_13346234 | NSP3 | hCoV-19/USA/ID-IBL-824953/2022 | N | 506 | R | 2 | 20220602 |
| EPI_ISL_18522580 | NSP3 | hCoV-19/Sweden/O-14_SE300_DE23-014112/2023 | N | 506 | E | 3 | 20231110 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | N | 506 | V | 5 | 20221222 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | N | 506 | F | 1 | 20211015 |
| EPI_ISL_19537517 | NSP3 | hCoV-19/Sweden/C-000200791682N2/2024 | N | 506 | G | 4 | 20241026 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | N | 506 | P | 2 | 20221213 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | Y | 507 | T | 3 | 20220726 |
| EPI_ISL_18301840 | NSP3 | hCoV-19/Italy/LOM-69468825/2023 | Y | 507 | D | 2 | 20230913 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | Y | 507 | W | 2 | 20210805 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | Y | 507 | E | 1 | 20230116 |
| EPI_ISL_18853473 | NSP3 | hCoV-19/South Korea/KDCA283667/2023 | Y | 507 | del | 65 | 20231216 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 507 | insstopM | 1 | 20230101 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Y | 507 | K | 8 | 20220509 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | Y | 507 | R | 1 | 20211015 |
| EPI_ISL_13257815 | NSP3 | hCoV-19/Kazakhstan/SEV-NRL-S1780/2022 | Y | 507 | stop | 24 | 20220415 |
| EPI_ISL_17955580 | NSP3 | hCoV-19/USA/TX-HMH-129590/2023 | Y | 507 | L | 77 | 20230623 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 507 | A | 2 | 20211006 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | Y | 507 | H | 33 | 20240708 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | Y | 507 | I | 25 | 20230412 |
| EPI_ISL_16371974 | NSP3 | hCoV-19/Chile/RM-139341/2022 | Y | 507 | V | 3 | 20221222 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 507 | Q | 88 | 20250116 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | Y | 507 | C | 4 | 20230925 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | Y | 507 | F | 49 | 20230217 |
| EPI_ISL_15068131 | NSP3 | hCoV-19/USA/ID-IBL-851938/2022 | Y | 507 | insstopP | 3 | 20220907 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Y | 507 | G | 1 | 20220210 |
| EPI_ISL_12955767 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733747916/2022 | Y | 507 | S | 4 | 20220227 |
| EPI_ISL_19014002 | NSP3 | hCoV-19/Japan/4141461_S19/2023 | Y | 507 | N | 2 | 20231115 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | I | 508 | N | 1 | 20210526 |
| EPI_ISL_13829410 | NSP3 | hCoV-19/USA/ID-IBL-833870/2022 | I | 508 | P | 1 | 20220701 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | I | 508 | L | 68 | 20240708 |
| EPI_ISL_19459323 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16243/2024 | I | 508 | del | 94 | 20240528 |
| EPI_ISL_17804017 | NSP3 | hCoV-19/Italy/LOM-69391470/2023 | I | 508 | J | 7 | 20230602 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | I | 508 | C | 1 | 20210525 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | I | 508 | F | 1 | 20210805 |
| EPI_ISL_18777179 | NSP3 | hCoV-19/Canada/BC-BCCDC-689769/2023 | I | 508 | T | 680 | 20231221 |
| EPI_ISL_3636272 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ13948/2021 | I | 508 | S | 2 | 20210806 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | I | 508 | Q | 87 | 20230220 |
| EPI_ISL_19511260 | NSP3 | hCoV-19/Netherlands/ZH-EMC-8882/2024 | I | 508 | V | 511 | 20240831 |
| EPI_ISL_17324204 | NSP3 | hCoV-19/Australia/SA528980/2023 | I | 508 | M | 43 | 20230320 |
| EPI_ISL_18110550 | NSP3 | hCoV-19/USA/MS-MSPHL-0367/2023 | I | 508 | A | 1 | 20230807 |
| EPI_ISL_17955580 | NSP3 | hCoV-19/USA/TX-HMH-129590/2023 | I | 508 | Y | 75 | 20230623 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 508 | stop | 3 | 20230108 |
| EPI_ISL_19147473 | NSP3 | hCoV-19/Spain/AS-HUCA-232439022/2024 | I | 508 | K | 4 | 20240509 |
| EPI_ISL_18301840 | NSP3 | hCoV-19/Italy/LOM-69468825/2023 | I | 508 | R | 11 | 20230913 |
| EPI_ISL_17162916 | NSP3 | hCoV-19/USA/ID-IBL-876977/2023 | T | 509 | stop | 21 | 20230220 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | T | 509 | insIIstopPL | 1 | 20210730 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | T | 509 | L | 4 | 20230410 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 509 | E | 4 | 20250116 |
| EPI_ISL_13346234 | NSP3 | hCoV-19/USA/ID-IBL-824953/2022 | T | 509 | Y | 1 | 20220602 |
| EPI_ISL_14546540 | NSP3 | hCoV-19/Denmark/DCGC-566146/2022 | T | 509 | S | 5 | 20220801 |
| EPI_ISL_17270414 | NSP3 | hCoV-19/Chile/RM-20742/2023 | T | 509 | P | 18 | 20230307 |
| EPI_ISL_18255154 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-12/2023 | T | 509 | V | 6 | 20230319 |
| EPI_ISL_19459323 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16243/2024 | T | 509 | N | 93 | 20240528 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 509 | D | 1 | 20210424 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | T | 509 | A | 32 | 20230217 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | T | 509 | K | 9 | 20220509 |
| EPI_ISL_2801523 | NSP3 | hCoV-19/USA/OR-OSPHL01077/2021 | T | 509 | W | 1 | 20210623 |
| EPI_ISL_17705356 | NSP3 | hCoV-19/Puerto Rico/PR-I84236/2023 | T | 509 | I | 7 | 20230420 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | T | 509 | del | 103 | 20240708 |
| EPI_ISL_13563933 | NSP3 | hCoV-19/USA/ID-IBL-825612/2022 | T | 509 | Q | 2 | 20220606 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 509 | R | 2 | 20230116 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 510 | V | 3 | 20211006 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 510 | D | 1 | 20230104 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | T | 510 | insISLAGS | 1 | 20230217 |
| EPI_ISL_16408395 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1124/2022 | T | 510 | S | 10 | 20221107 |
| EPI_ISL_18936185 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00165/2023 | T | 510 | N | 159 | 20230422 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 510 | K | 3 | 20230108 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | T | 510 | del | 116 | 20240708 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | T | 510 | M | 2 | 20211015 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | T | 510 | stop | 3 | 20220726 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | T | 510 | W | 2 | 20210805 |
| EPI_ISL_17162916 | NSP3 | hCoV-19/USA/ID-IBL-876977/2023 | T | 510 | P | 21 | 20230220 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | T | 510 | Y | 3 | 20230410 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | T | 510 | A | 9 | 20220509 |
| EPI_ISL_19459323 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16243/2024 | T | 510 | H | 88 | 20240528 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | T | 510 | G | 1 | 20210319 |
| EPI_ISL_15693034 | NSP3 | hCoV-19/USA/ID-IBL-861593/2022 | T | 510 | insstopVK | 1 | 20221020 |
| EPI_ISL_15068131 | NSP3 | hCoV-19/USA/ID-IBL-851938/2022 | T | 510 | R | 6 | 20220907 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | T | 510 | Q | 2 | 20220302 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | T | 510 | E | 1 | 20221213 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 510 | L | 6 | 20250116 |
| EPI_ISL_19263252 | NSP3 | hCoV-19/Spain/CL_UCHV_47459/2024 | T | 510 | I | 93 | 20240613 |
| EPI_ISL_18936185 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00165/2023 | Y | 511 | insL | 1 | 20230422 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | Y | 511 | N | 15 | 20230217 |
| EPI_ISL_15415373 | NSP3 | hCoV-19/USA/ID-IBL-858370/2022 | Y | 511 | V | 2 | 20221004 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | Y | 511 | stop | 23 | 20230222 |
| EPI_ISL_5337379 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-53829/2021 | Y | 511 | insstopPLT | 2 | 20210808 |
| EPI_ISL_18112366 | NSP3 | hCoV-19/Spain/AS-HUCA-232346456/2023 | Y | 511 | C | 15 | 20230727 |
| EPI_ISL_17270414 | NSP3 | hCoV-19/Chile/RM-20742/2023 | Y | 511 | K | 13 | 20230307 |
| EPI_ISL_10728127 | NSP3 | hCoV-19/Spain/RI-CIBIR-218080740-Run35/2022 | Y | 511 | R | 2 | 20220202 |
| EPI_ISL_14907093 | NSP3 | hCoV-19/USA/ID-IBL-851022/2022 | Y | 511 | W | 7 | 20220901 |
| EPI_ISL_13118905 | NSP3 | hCoV-19/Finland/THL-202213576/2022 | Y | 511 | D | 2 | 20220509 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | Y | 511 | insLI | 1 | 20210806 |
| EPI_ISL_19459323 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16243/2024 | Y | 511 | L | 115 | 20240528 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 511 | del | 143 | 20250116 |
| EPI_ISL_18226320 | NSP3 | hCoV-19/env/India/MH-FMR_B6-54a/2023 | Y | 511 | T | 5 | 20230313 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 511 | E | 1 | 20211006 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | Y | 511 | insstop | 79 | 20230220 |
| EPI_ISL_19618863 | NSP3 | hCoV-19/Egypt/CPHL-EGY24335/2024 | Y | 511 | H | 61 | 20240612 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | Y | 511 | P | 4 | 20220726 |
| EPI_ISL_16332719 | NSP3 | hCoV-19/Australia/NSW-SAVID-15585/2022 | Y | 511 | S | 12 | 20221213 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Y | 511 | I | 88 | 20230410 |
| EPI_ISL_11291782 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1/2022 | Y | 511 | M | 1 | 20220125 |
| EPI_ISL_18445814 | NSP3 | hCoV-19/Spain/CL-44500/2023 | Y | 511 | F | 16 | 20231002 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | P | 512 | D | 2 | 20230410 |
| EPI_ISL_18875859 | NSP3 | hCoV-19/Russia/RARI-1867/2023 | P | 512 | A | 8 | 20230810 |
| EPI_ISL_14907093 | NSP3 | hCoV-19/USA/ID-IBL-851022/2022 | P | 512 | H | 5 | 20220901 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | P | 512 | del | 135 | 20250116 |
| EPI_ISL_19192557 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15992/2024 | P | 512 | S | 8 | 20240306 |
| EPI_ISL_14333820 | NSP3 | hCoV-19/USA/ID-IBL-840743/2022 | P | 512 | insVR | 2 | 20220727 |
| EPI_ISL_14287993 | NSP3 | hCoV-19/USA/ID-IBL-839199/2022 | P | 512 | V | 2 | 20220721 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | P | 512 | C | 2 | 20230108 |
| EPI_ISL_17270414 | NSP3 | hCoV-19/Chile/RM-20742/2023 | P | 512 | K | 16 | 20230307 |
| EPI_ISL_17463054 | NSP3 | hCoV-19/USA/ID-IBL-878853/2023 | P | 512 | N | 5 | 20230314 |
| EPI_ISL_19764446 | NSP3 | hCoV-19/Spain/AS-HUCA-232515734/2025 | P | 512 | Q | 10 | 20250221 |
| EPI_ISL_18301840 | NSP3 | hCoV-19/Italy/LOM-69468825/2023 | P | 512 | T | 22 | 20230913 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | P | 512 | E | 4 | 20221201 |
| EPI_ISL_13563933 | NSP3 | hCoV-19/USA/ID-IBL-825612/2022 | P | 512 | I | 2 | 20220606 |
| EPI_ISL_18522728 | NSP3 | hCoV-19/Belgium/Briant-12316313801/2023 | P | 512 | L | 53 | 20231109 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | P | 512 | F | 3 | 20230302 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | P | 512 | stop | 6 | 20221122 |
| EPI_ISL_18971189 | NSP3 | hCoV-19/USA/IL-RIPHL_32774_G/2024 | P | 512 | R | 21 | 20240209 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | P | 512 | G | 19 | 20230217 |
| EPI_ISL_15068131 | NSP3 | hCoV-19/USA/ID-IBL-851938/2022 | G | 513 | F | 11 | 20220907 |
| EPI_ISL_17270414 | NSP3 | hCoV-19/Chile/RM-20742/2023 | G | 513 | A | 17 | 20230307 |
| EPI_ISL_17201470 | NSP3 | hCoV-19/Chile/MA-15277/2023 | G | 513 | T | 6 | 20230223 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | G | 513 | K | 5 | 20230222 |
| EPI_ISL_15377070 | NSP3 | hCoV-19/USA/ID-IBL-857597/2022 | G | 513 | insGF | 1 | 20220929 |
| EPI_ISL_13829418 | NSP3 | hCoV-19/USA/ID-IBL-833880/2022 | G | 513 | insLK | 1 | 20220701 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | G | 513 | P | 17 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 513 | H | 1 | 20210318 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 513 | Q | 4 | 20230108 |
| EPI_ISL_18977872 | NSP3 | hCoV-19/Germany/BE-ChVir46202/2024 | G | 513 | C | 22 | 20240103 |
| EPI_ISL_17463054 | NSP3 | hCoV-19/USA/ID-IBL-878853/2023 | G | 513 | R | 29 | 20230314 |
| EPI_ISL_15003396 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1269/2021 | G | 513 | I | 1 | 20210930 |
| EPI_ISL_14907093 | NSP3 | hCoV-19/USA/ID-IBL-851022/2022 | G | 513 | stop | 6 | 20220901 |
| EPI_ISL_13829410 | NSP3 | hCoV-19/USA/ID-IBL-833870/2022 | G | 513 | W | 2 | 20220701 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | G | 513 | N | 5 | 20230925 |
| EPI_ISL_17260603 | NSP3 | hCoV-19/USA/ID-IBL-877810/2023 | G | 513 | S | 27 | 20230220 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | G | 513 | E | 1 | 20220210 |
| EPI_ISL_9139577 | NSP3 | hCoV-19/USA/IL-CDC-ASC210586936/2022 | G | 513 | Y | 1 | 20220108 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | G | 513 | del | 133 | 20250116 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | G | 513 | D | 5 | 20230217 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | G | 513 | L | 80 | 20230220 |
| EPI_ISL_18226320 | NSP3 | hCoV-19/env/India/MH-FMR_B6-54a/2023 | G | 513 | V | 48 | 20230313 |
| EPI_ISL_16078816 | NSP3 | hCoV-19/South Africa/NICD-K325-007-186/2021 | G | 513 | M | 1 | 20210526 |
| EPI_ISL_19014002 | NSP3 | hCoV-19/Japan/4141461_S19/2023 | Q | 514 | H | 34 | 20231115 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Q | 514 | N | 2 | 20211006 |
| EPI_ISL_18875861 | NSP3 | hCoV-19/Russia/RARI-2372/2023 | Q | 514 | P | 4 | 20230929 |
| EPI_ISL_14546540 | NSP3 | hCoV-19/Denmark/DCGC-566146/2022 | Q | 514 | G | 3 | 20220801 |
| EPI_ISL_14907093 | NSP3 | hCoV-19/USA/ID-IBL-851022/2022 | Q | 514 | M | 2 | 20220901 |
| EPI_ISL_19212762 | NSP3 | hCoV-19/env/India/MH-NCL-226-05/2023 | Q | 514 | V | 13 | 20231205 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | Q | 514 | A | 4 | 20220726 |
| EPI_ISL_17186577 | NSP3 | hCoV-19/Sichuan/ZYCDC-230084/2023 | Q | 514 | stop | 21 | 20230303 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 514 | I | 1 | 20220210 |
| EPI_ISL_16078675 | NSP3 | hCoV-19/South Africa/NICD-K310-004-164/2021 | Q | 514 | D | 2 | 20210304 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | Q | 514 | W | 3 | 20230217 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | Q | 514 | S | 144 | 20240708 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Q | 514 | del | 134 | 20250116 |
| EPI_ISL_19719070 | NSP3 | hCoV-19/env/Germany/BY-LGL-6454080/2025 | Q | 514 | R | 79 | 20250122 |
| EPI_ISL_4122621 | NSP3 | hCoV-19/England/PHEC-X308X8EF/2021 | Q | 514 | F | 2 | 20210826 |
| EPI_ISL_19636723 | NSP3 | hCoV-19/USA/CT-DPH-1265546001/2024 | Q | 514 | L | 20 | 20241211 |
| EPI_ISL_8688197 | NSP3 | hCoV-19/Spain/AS-262165062/2021 | Q | 514 | Y | 2 | 20211026 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | Q | 514 | C | 2 | 20230222 |
| EPI_ISL_17463054 | NSP3 | hCoV-19/USA/ID-IBL-878853/2023 | Q | 514 | E | 4 | 20230314 |
| EPI_ISL_18546650 | NSP3 | hCoV-19/USA/TX-HMH-M-135563/2023 | Q | 514 | K | 26 | 20231110 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | Q | 514 | T | 79 | 20230220 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | G | 515 | insHKWLHC | 1 | 20210803 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | G | 515 | S | 32 | 20230330 |
| EPI_ISL_3760019 | NSP3 | hCoV-19/USA/ID-IBL-747273/2021 | G | 515 | insY | 1 | 20210808 |
| EPI_ISL_18936207 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00052/2023 | G | 515 | L | 5 | 20230412 |
| EPI_ISL_13812286 | NSP3 | hCoV-19/USA/ID-IBL-831852/2022 | G | 515 | E | 1 | 20220606 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | G | 515 | Q | 3 | 20220222 |
| EPI_ISL_18110550 | NSP3 | hCoV-19/USA/MS-MSPHL-0367/2023 | G | 515 | C | 10 | 20230807 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 515 | T | 2 | 20230108 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | G | 515 | del | 164 | 20240319 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | G | 515 | F | 3 | 20211006 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | G | 515 | stop | 8 | 20230222 |
| EPI_ISL_19212762 | NSP3 | hCoV-19/env/India/MH-NCL-226-05/2023 | G | 515 | R | 92 | 20231205 |
| EPI_ISL_15927979 | NSP3 | hCoV-19/Turkey/KSS-KEAH4889468982/2022 | G | 515 | D | 7 | 20221114 |
| EPI_ISL_14881058 | NSP3 | hCoV-19/USA/ID-IBL-846232/2022 | G | 515 | Y | 2 | 20220816 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | G | 515 | N | 3 | 20221121 |
| EPI_ISL_19803236 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528451/2025 | G | 515 | V | 127 | 20250312 |
| EPI_ISL_15377070 | NSP3 | hCoV-19/USA/ID-IBL-857597/2022 | G | 515 | W | 9 | 20220929 |
| EPI_ISL_13829410 | NSP3 | hCoV-19/USA/ID-IBL-833870/2022 | G | 515 | H | 1 | 20220701 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | G | 515 | insSEYA | 1 | 20211006 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | G | 515 | insS | 1 | 20220602 |
| EPI_ISL_19284584 | NSP3 | hCoV-19/Puerto Rico/S-7049/2024 | G | 515 | A | 9 | 20240614 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | G | 515 | K | 22 | 20250116 |
| EPI_ISL_14881058 | NSP3 | hCoV-19/USA/ID-IBL-846232/2022 | L | 516 | M | 4 | 20220816 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 516 | P | 1 | 20220210 |
| EPI_ISL_19627206 | NSP3 | hCoV-19/Slovenia/1002158/2024 | L | 516 | S | 120 | 20240920 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | L | 516 | insK | 1 | 20230401 |
| EPI_ISL_18212531 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS_98450/2023 | L | 516 | J | 4 | 20230822 |
| EPI_ISL_19803236 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528451/2025 | L | 516 | stop | 105 | 20250312 |
| EPI_ISL_13829410 | NSP3 | hCoV-19/USA/ID-IBL-833870/2022 | L | 516 | C | 1 | 20220701 |
| EPI_ISL_19334598 | NSP3 | hCoV-19/Egypt/CPHL-EGY24137/2024 | L | 516 | V | 168 | 20240624 |
| EPI_ISL_19325797 | NSP3 | hCoV-19/Uganda/UVRI_NISS-UV-562/2024 | L | 516 | I | 27 | 20240529 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | L | 516 | K | 4 | 20221122 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | L | 516 | Y | 4 | 20230217 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | L | 516 | del | 130 | 20240319 |
| EPI_ISL_1927319 | NSP3 | hCoV-19/Japan/PG-29338/2021 | L | 516 | T | 1 | 20210313 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 516 | F | 112 | 20250116 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | L | 516 | R | 2 | 20210803 |
| EPI_ISL_17201470 | NSP3 | hCoV-19/Chile/MA-15277/2023 | L | 516 | A | 5 | 20230223 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 517 | I | 14 | 20230108 |
| EPI_ISL_4122621 | NSP3 | hCoV-19/England/PHEC-X308X8EF/2021 | N | 517 | F | 2 | 20210826 |
| EPI_ISL_16361273 | NSP3 | hCoV-19/USA/RI-CDC-LC0964682/2022 | N | 517 | T | 484 | 20221218 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | N | 517 | del | 136 | 20240319 |
| EPI_ISL_16730923 | NSP3 | hCoV-19/Canada/ON-PHL-23-07943/2023 | N | 517 | B | 2 | 20230125 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | N | 517 | C | 1 | 20210525 |
| EPI_ISL_17270788 | NSP3 | hCoV-19/France/IDF-IPP06205/2023 | N | 517 | D | 127 | 20230306 |
| EPI_ISL_17463053 | NSP3 | hCoV-19/USA/ID-IBL-878698/2023 | N | 517 | M | 88 | 20230314 |
| EPI_ISL_19755671 | NSP3 | hCoV-19/USA/IL-RIPHL_81569_G/2025 | N | 517 | S | 997 | 20250127 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | N | 517 | insVstopM | 2 | 20220222 |
| EPI_ISL_18936207 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00052/2023 | N | 517 | H | 52 | 20230412 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | N | 517 | Q | 2 | 20221201 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | N | 517 | R | 81 | 20230222 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | N | 517 | P | 1 | 20211015 |
| EPI_ISL_7832654 | NSP3 | hCoV-19/USA/ID-IBL-774844/2021 | N | 517 | insV | 1 | 20211203 |
| EPI_ISL_13812273 | NSP3 | hCoV-19/USA/ID-IBL-831538/2022 | N | 517 | V | 1 | 20220624 |
| EPI_ISL_19212762 | NSP3 | hCoV-19/env/India/MH-NCL-226-05/2023 | N | 517 | stop | 17 | 20231205 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | N | 517 | G | 16 | 20230217 |
| EPI_ISL_19816442 | NSP3 | hCoV-19/USA/CA-SEARCH-233814/2023 | N | 517 | Y | 5 | 20231213 |
| EPI_ISL_18301840 | NSP3 | hCoV-19/Italy/LOM-69468825/2023 | N | 517 | K | 74 | 20230913 |
| EPI_ISL_17463053 | NSP3 | hCoV-19/USA/ID-IBL-878698/2023 | G | 518 | V | 267 | 20230314 |
| EPI_ISL_19259954 | NSP3 | hCoV-19/USA/TN-SPHL-21737/2023 | G | 518 | D | 44 | 20231120 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | G | 518 | A | 6 | 20230116 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | G | 518 | L | 3 | 20221201 |
| EPI_ISL_18115489 | NSP3 | hCoV-19/Thailand/NIC_BKK_7014/2023 | G | 518 | W | 69 | 20230707 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | G | 518 | K | 4 | 20221121 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | G | 518 | insL | 1 | 20210806 |
| EPI_ISL_14881058 | NSP3 | hCoV-19/USA/ID-IBL-846232/2022 | G | 518 | N | 2 | 20220816 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | G | 518 | M | 13 | 20230109 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 518 | H | 3 | 20230108 |
| EPI_ISL_17334080 | NSP3 | hCoV-19/USA/IL-3232023005/2023 | G | 518 | R | 8 | 20230317 |
| EPI_ISL_19764443 | NSP3 | hCoV-19/Spain/AS-HUCA-232515422/2025 | G | 518 | C | 16 | 20250221 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | G | 518 | T | 1 | 20210812 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | G | 518 | S | 35 | 20220725 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | G | 518 | P | 1 | 20250116 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | G | 518 | del | 132 | 20230905 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | Y | 519 | stop | 81 | 20230220 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 519 | P | 1 | 20250116 |
| EPI_ISL_17096426 | NSP3 | hCoV-19/Spain/AS-232312167/2023 | Y | 519 | H | 11 | 20230225 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | Y | 519 | K | 2 | 20210803 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | Y | 519 | Q | 2 | 20230217 |
| EPI_ISL_1051641 | NSP3 | hCoV-19/England/OXON-F61F5C/2021 | Y | 519 | W | 1 | 20210129 |
| EPI_ISL_18974070 | NSP3 | hCoV-19/Russia/SPE-RII-MH167958S/2024 | Y | 519 | N | 14 | 20240213 |
| EPI_ISL_17632339 | NSP3 | hCoV-19/Paraguay/560719/2022 | Y | 519 | F | 6 | 20221210 |
| EPI_ISL_17018797 | NSP3 | hCoV-19/Italy/LAZ_IZSLT-23011660/2023 | Y | 519 | C | 5 | 20230128 |
| EPI_ISL_14773219 | NSP3 | hCoV-19/Finland/THL-202218114/2022 | Y | 519 | D | 9 | 20220812 |
| EPI_ISL_15388070 | NSP3 | hCoV-19/Morocco/FMP411/2021 | Y | 519 | A | 1 | 20211227 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | Y | 519 | V | 23 | 20230109 |
| EPI_ISL_15377070 | NSP3 | hCoV-19/USA/ID-IBL-857597/2022 | Y | 519 | R | 8 | 20220929 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | Y | 519 | S | 19 | 20230217 |
| EPI_ISL_18115489 | NSP3 | hCoV-19/Thailand/NIC_BKK_7014/2023 | Y | 519 | L | 70 | 20230707 |
| EPI_ISL_14881058 | NSP3 | hCoV-19/USA/ID-IBL-846232/2022 | Y | 519 | I | 6 | 20220816 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | Y | 519 | del | 116 | 20230905 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | Y | 519 | M | 1 | 20210918 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | Y | 519 | T | 91 | 20240319 |
| EPI_ISL_13829418 | NSP3 | hCoV-19/USA/ID-IBL-833880/2022 | Y | 519 | insstop | 1 | 20220701 |
| EPI_ISL_1730560 | NSP3 | hCoV-19/England/OXON-F80063/2021 | Y | 519 | G | 1 | 20210402 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 520 | F | 1 | 20210318 |
| EPI_ISL_15377070 | NSP3 | hCoV-19/USA/ID-IBL-857597/2022 | T | 520 | G | 9 | 20220929 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 520 | A | 8 | 20250116 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | T | 520 | del | 70 | 20230905 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | T | 520 | stop | 3 | 20221121 |
| EPI_ISL_18115489 | NSP3 | hCoV-19/Thailand/NIC_BKK_7014/2023 | T | 520 | H | 65 | 20230707 |
| EPI_ISL_14907075 | NSP3 | hCoV-19/USA/ID-IBL-849983/2022 | T | 520 | V | 7 | 20220829 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | T | 520 | M | 76 | 20230220 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | T | 520 | N | 25 | 20220928 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 520 | E | 1 | 20210424 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | T | 520 | K | 1 | 20220210 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | T | 520 | Y | 2 | 20221122 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | T | 520 | L | 99 | 20240319 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | T | 520 | C | 22 | 20230217 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 520 | Q | 1 | 20211006 |
| EPI_ISL_16852850 | NSP3 | hCoV-19/USA/ID-IBL-872976/2023 | T | 520 | D | 2 | 20230110 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 520 | R | 1 | 20230108 |
| EPI_ISL_17718546 | NSP3 | hCoV-19/Vietnam/HCMC-S13-M169/2023 | T | 520 | S | 24 | 20230429 |
| EPI_ISL_19363988 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14093/2024 | T | 520 | I | 111 | 20240410 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | V | 521 | H | 2 | 20230410 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 521 | L | 180 | 20250116 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 521 | Y | 4 | 20230217 |
| EPI_ISL_18301840 | NSP3 | hCoV-19/Italy/LOM-69468825/2023 | V | 521 | G | 14 | 20230913 |
| EPI_ISL_15681715 | NSP3 | hCoV-19/Turkey/KSS-HEEAH4845949576/2022 | V | 521 | insstop | 12 | 20221025 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | V | 521 | insstopKGWWHYstop | 1 | 20210701 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | V | 521 | insLstop | 1 | 20210918 |
| EPI_ISL_14546540 | NSP3 | hCoV-19/Denmark/DCGC-566146/2022 | V | 521 | F | 2 | 20220801 |
| EPI_ISL_18110550 | NSP3 | hCoV-19/USA/MS-MSPHL-0367/2023 | V | 521 | E | 6 | 20230807 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | V | 521 | del | 53 | 20230905 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | V | 521 | insTLstop | 76 | 20230220 |
| EPI_ISL_19143512 | NSP3 | hCoV-19/Pakistan/13782783/2024 | V | 521 | stop | 98 | 20240319 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | V | 521 | K | 2 | 20210316 |
| EPI_ISL_18115489 | NSP3 | hCoV-19/Thailand/NIC_BKK_7014/2023 | V | 521 | C | 68 | 20230707 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | V | 521 | insstopR | 1 | 20211122 |
| EPI_ISL_15388070 | NSP3 | hCoV-19/Morocco/FMP411/2021 | V | 521 | M | 1 | 20211227 |
| EPI_ISL_19767011 | NSP3 | hCoV-19/USA/NE-RP251805/2025 | V | 521 | I | 1769 | 20250220 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | V | 521 | R | 5 | 20220725 |
| EPI_ISL_16921626 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS_90115/2023 | V | 521 | A | 20 | 20230127 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | V | 521 | S | 3 | 20221122 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | V | 521 | T | 33 | 20230406 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | E | 522 | F | 1 | 20221229 |
| EPI_ISL_19192495 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16055/2024 | E | 522 | del | 56 | 20240405 |
| EPI_ISL_19824933 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBE07737/2025 | E | 522 | D | 3663 | 20250403 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | E | 522 | H | 1 | 20210802 |
| EPI_ISL_18115489 | NSP3 | hCoV-19/Thailand/NIC_BKK_7014/2023 | E | 522 | R | 258 | 20230707 |
| EPI_ISL_17201470 | NSP3 | hCoV-19/Chile/MA-15277/2023 | E | 522 | M | 5 | 20230223 |
| EPI_ISL_16852850 | NSP3 | hCoV-19/USA/ID-IBL-872976/2023 | E | 522 | stop | 14 | 20230110 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | E | 522 | N | 5 | 20211015 |
| EPI_ISL_10113815 | NSP3 | hCoV-19/Zambia/MG48_11890/2021 | E | 522 | W | 1 | 20210218 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | E | 522 | P | 2 | 20230410 |
| EPI_ISL_19505522 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YFPPQ/2024 | E | 522 | K | 203 | 20241002 |
| EPI_ISL_10192786 | NSP3 | hCoV-19/England/NEWC-371F709/2022 | E | 522 | Z | 3 | 20220215 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 522 | Q | 28 | 20250116 |
| EPI_ISL_19084871 | NSP3 | hCoV-19/Japan/FR301-0240/2024 | E | 522 | G | 238 | 20240309 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | E | 522 | L | 15 | 20230217 |
| EPI_ISL_14298911 | NSP3 | hCoV-19/Turkey/HSGM-IST-03668/2022 | E | 522 | V | 14 | 20220702 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | E | 522 | I | 2 | 20220604 |
| EPI_ISL_13647734 | NSP3 | hCoV-19/USA/ID-IBL-829637/2022 | E | 522 | T | 3 | 20220621 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | E | 522 | S | 2 | 20221121 |
| EPI_ISL_19452657 | NSP3 | hCoV-19/USA/NY-CDC-LC1121478/2024 | E | 522 | A | 117 | 20240915 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | E | 523 | N | 2 | 20220725 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | E | 523 | M | 29 | 20230406 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | E | 523 | C | 1 | 20221229 |
| EPI_ISL_19134069 | NSP3 | hCoV-19/env/Germany/BY-LGL-6219330/2024 | E | 523 | del | 66 | 20240424 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 523 | D | 2036 | 20250116 |
| EPI_ISL_18269104 | NSP3 | hCoV-19/USA/IL-C23WGS2165/2023 | E | 523 | K | 21 | 20230424 |
| EPI_ISL_13536885 | NSP3 | hCoV-19/India/WB-INSACOG-1930302037511/2022 | E | 523 | stop | 14 | 20220614 |
| EPI_ISL_15693034 | NSP3 | hCoV-19/USA/ID-IBL-861593/2022 | E | 523 | Q | 7 | 20221020 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | E | 523 | S | 16 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 523 | F | 1 | 20220210 |
| EPI_ISL_6599853 | NSP3 | hCoV-19/Thailand/001/2021 | E | 523 | W | 1 | 20211021 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | E | 523 | T | 1 | 20210802 |
| EPI_ISL_16074771 | NSP3 | hCoV-19/Belgium/Jessa_11-2248-004342/2022 | E | 523 | V | 4 | 20221201 |
| EPI_ISL_18052803 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14517/2023 | E | 523 | R | 206 | 20230626 |
| EPI_ISL_17201470 | NSP3 | hCoV-19/Chile/MA-15277/2023 | E | 523 | L | 5 | 20230223 |
| EPI_ISL_18115489 | NSP3 | hCoV-19/Thailand/NIC_BKK_7014/2023 | E | 523 | G | 68 | 20230707 |
| EPI_ISL_17273841 | NSP3 | hCoV-19/England/BRBR-32708132/2023 | E | 523 | Z | 8 | 20230313 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | E | 523 | H | 3 | 20221121 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | E | 523 | A | 5 | 20230925 |
| EPI_ISL_12471191 | NSP3 | hCoV-19/USA/ID-IBL-814458/2022 | E | 523 | Y | 1 | 20220417 |
| EPI_ISL_10806471 | NSP3 | hCoV-19/Pakistan/AKU-DEC-RUN3-MIN-06/2021 | A | 524 | H | 1 | 20211130 |
| EPI_ISL_13812286 | NSP3 | hCoV-19/USA/ID-IBL-831852/2022 | A | 524 | insstop | 1 | 20220606 |
| EPI_ISL_18052803 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14517/2023 | A | 524 | Q | 198 | 20230626 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | A | 524 | P | 2 | 20220604 |
| EPI_ISL_17839270 | NSP3 | hCoV-19/Turkey/EUVRC-19091/2023 | A | 524 | T | 23 | 20230423 |
| EPI_ISL_18115489 | NSP3 | hCoV-19/Thailand/NIC_BKK_7014/2023 | A | 524 | G | 93 | 20230707 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | A | 524 | K | 11 | 20230404 |
| EPI_ISL_19270794 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189706/2024 | A | 524 | E | 19 | 20240509 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | A | 524 | R | 10 | 20230109 |
| EPI_ISL_18407019 | NSP3 | hCoV-19/Bulgaria/23BG-NC_023516_R40/2023 | A | 524 | V | 149 | 20230831 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | A | 524 | I | 2 | 20220725 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | A | 524 | D | 2 | 20220725 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | A | 524 | C | 3 | 20220531 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | A | 524 | insSYR | 1 | 20230217 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | A | 524 | L | 32 | 20230406 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | A | 524 | W | 1 | 20220110 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | A | 524 | del | 58 | 20230905 |
| EPI_ISL_19757484 | NSP3 | hCoV-19/Portugal/INSA-PT52414/2025 | A | 524 | S | 439 | 20250208 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | A | 524 | stop | 3 | 20221121 |
| EPI_ISL_18036433 | NSP3 | hCoV-19/Guangdong/GDCDC_SZHG_1863/2023 | K | 525 | Q | 169 | 20230610 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | K | 525 | L | 4 | 20220604 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | K | 525 | insFstop | 1 | 20221122 |
| EPI_ISL_2650065 | NSP3 | hCoV-19/USA/AZ-ASPHL-1699/2020 | K | 525 | insL | 1 | 20200701 |
| EPI_ISL_12585721 | NSP3 | hCoV-19/Pakistan/AKU-MARCH-R2-MIN-02/2021 | K | 525 | P | 3 | 20211210 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | K | 525 | insDS | 1 | 20210802 |
| EPI_ISL_7059605 | NSP3 | hCoV-19/Japan/PG-163152/2021 | K | 525 | C | 1 | 20210816 |
| EPI_ISL_19340280 | NSP3 | hCoV-19/USA/CT-Yale-26133/2024 | K | 525 | T | 664 | 20240719 |
| EPI_ISL_6469656 | NSP3 | hCoV-19/Sweden/UUH-000200218964/2021 | K | 525 | insXXX | 1 | 20211028 |
| EPI_ISL_19764443 | NSP3 | hCoV-19/Spain/AS-HUCA-232515422/2025 | K | 525 | N | 129 | 20250221 |
| EPI_ISL_5441243 | NSP3 | hCoV-19/USA/ID-IBL-758886/2021 | K | 525 | D | 3 | 20210918 |
| EPI_ISL_19633261 | NSP3 | hCoV-19/France/BFC-IPP14117/2024 | K | 525 | R | 1674 | 20241209 |
| EPI_ISL_7492735 | NSP3 | hCoV-19/USA/ID-IBL-774047/2021 | K | 525 | insR | 1 | 20211201 |
| EPI_ISL_18371121 | NSP3 | hCoV-19/Turkey/HSGM-AA00554/2023 | K | 525 | E | 44 | 20230906 |
| EPI_ISL_17490200 | NSP3 | hCoV-19/USA/SC-MUSC-8832/2022 | K | 525 | M | 106 | 20221211 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 525 | stop | 59 | 20221229 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | K | 525 | insD | 1 | 20200807 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 525 | Y | 2 | 20250116 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | K | 525 | S | 1 | 20220110 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | K | 525 | del | 60 | 20231009 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | K | 525 | H | 14 | 20230217 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 525 | A | 44 | 20230410 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | K | 525 | V | 1 | 20220721 |
| EPI_ISL_18951451 | NSP3 | hCoV-19/USA/MS-MSPHL-0168/2024 | K | 525 | I | 5 | 20240216 |
| EPI_ISL_19270794 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189706/2024 | T | 526 | P | 3 | 20240509 |
| EPI_ISL_18115489 | NSP3 | hCoV-19/Thailand/NIC_BKK_7014/2023 | T | 526 | D | 67 | 20230707 |
| EPI_ISL_10969499 | NSP3 | hCoV-19/Lebanon/NIC206/2022 | T | 526 | insSAstop | 13 | 20220105 |
| EPI_ISL_16852850 | NSP3 | hCoV-19/USA/ID-IBL-872976/2023 | T | 526 | stop | 9 | 20230110 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | T | 526 | L | 8 | 20220725 |
| EPI_ISL_19805684 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U750-1/2025 | T | 526 | I | 3906 | 20250310 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | T | 526 | E | 5 | 20230217 |
| EPI_ISL_15388070 | NSP3 | hCoV-19/Morocco/FMP411/2021 | T | 526 | W | 1 | 20211227 |
| EPI_ISL_17275291 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45816/2023 | T | 526 | R | 537 | 20230217 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | T | 526 | insQ | 1 | 20200721 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 526 | G | 3 | 20230404 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | T | 526 | N | 18 | 20230330 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | T | 526 | K | 61 | 20230406 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 526 | Y | 1 | 20250116 |
| EPI_ISL_19650783 | NSP3 | hCoV-19/Sweden/G-24-600438/2024 | T | 526 | A | 487 | 20241208 |
| EPI_ISL_13829418 | NSP3 | hCoV-19/USA/ID-IBL-833880/2022 | T | 526 | H | 2 | 20220701 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | T | 526 | del | 57 | 20231009 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | T | 526 | V | 9 | 20221229 |
| EPI_ISL_19262584 | NSP3 | hCoV-19/env/Germany/BY-LGL-6278507/2024 | T | 526 | S | 16 | 20240626 |
| EPI_ISL_13812294 | NSP3 | hCoV-19/USA/ID-IBL-831870/2022 | T | 526 | M | 2 | 20220627 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 526 | C | 2 | 20230108 |
| EPI_ISL_18951451 | NSP3 | hCoV-19/USA/MS-MSPHL-0168/2024 | T | 526 | Q | 209 | 20240216 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | V | 527 | insLGIstopD | 1 | 20230217 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | V | 527 | E | 8 | 20230330 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 527 | I | 5 | 20230404 |
| EPI_ISL_13620909 | NSP3 | hCoV-19/Turkey/HSGM-IST-02399/2022 | V | 527 | M | 43 | 20220622 |
| EPI_ISL_15693030 | NSP3 | hCoV-19/USA/ID-IBL-861490/2022 | V | 527 | stop | 6 | 20221023 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | V | 527 | insstop | 1 | 20221122 |
| EPI_ISL_17275291 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45816/2023 | V | 527 | Y | 3 | 20230217 |
| EPI_ISL_19719218 | NSP3 | hCoV-19/Italy/APU-IZSPB-PT8866/2025 | V | 527 | A | 385 | 20250108 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | V | 527 | del | 56 | 20231009 |
| EPI_ISL_18115500 | NSP3 | hCoV-19/Thailand/NIC_BKK_7324/2023 | V | 527 | S | 53 | 20230705 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | V | 527 | Q | 5 | 20230109 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 527 | R | 2 | 20250116 |
| EPI_ISL_18951451 | NSP3 | hCoV-19/USA/MS-MSPHL-0168/2024 | V | 527 | C | 212 | 20240216 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | V | 527 | insAstopK | 17 | 20220720 |
| EPI_ISL_14546540 | NSP3 | hCoV-19/Denmark/DCGC-566146/2022 | V | 527 | G | 13 | 20220801 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | V | 527 | H | 2 | 20210809 |
| EPI_ISL_17598041 | NSP3 | hCoV-19/Finland/THL-04523/2023 | V | 527 | L | 234 | 20230411 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | V | 527 | F | 7 | 20230905 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | V | 527 | T | 9 | 20220531 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 527 | K | 28 | 20221229 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | L | 528 | R | 5 | 20231212 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 528 | A | 51 | 20250116 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 528 | V | 46 | 20230410 |
| EPI_ISL_14907075 | NSP3 | hCoV-19/USA/ID-IBL-849983/2022 | L | 528 | S | 2 | 20220829 |
| EPI_ISL_18436053 | NSP3 | hCoV-19/Italy/LOM-69495577/2023 | L | 528 | I | 41 | 20231019 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 528 | T | 2 | 20220210 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | L | 528 | C | 9 | 20230109 |
| EPI_ISL_14881060 | NSP3 | hCoV-19/USA/ID-IBL-846235/2022 | L | 528 | N | 3 | 20220816 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | L | 528 | del | 61 | 20231009 |
| EPI_ISL_12471191 | NSP3 | hCoV-19/USA/ID-IBL-814458/2022 | L | 528 | insLIstopWAD | 1 | 20220417 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 528 | K | 4 | 20230108 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | L | 528 | E | 1 | 20210701 |
| EPI_ISL_1756423 | NSP3 | hCoV-19/France/IDF-HMN-21042080329/2021 | L | 528 | H | 1 | 20210329 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | L | 528 | insIstopPLVstopCstopCRE | 1 | 20220531 |
| EPI_ISL_18464068 | NSP3 | hCoV-19/USA/HI-H2325809/2023 | L | 528 | F | 676 | 20231002 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | L | 528 | G | 2 | 20220110 |
| EPI_ISL_17275291 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45816/2023 | L | 528 | M | 3 | 20230217 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | L | 528 | Q | 3 | 20210804 |
| EPI_ISL_14317266 | NSP3 | hCoV-19/Denmark/DCGC-558540/2022 | L | 528 | J | 5 | 20220730 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | L | 528 | P | 5 | 20231007 |
| EPI_ISL_16049835 | NSP3 | hCoV-19/USA/ID-IBL-864328/2022 | L | 528 | stop | 8 | 20221110 |
| EPI_ISL_6599853 | NSP3 | hCoV-19/Thailand/001/2021 | L | 528 | Y | 2 | 20211021 |
| EPI_ISL_12319873 | NSP3 | hCoV-19/Turkey/HSGM-GS1436/2022 | K | 529 | Y | 1 | 20220401 |
| EPI_ISL_18115500 | NSP3 | hCoV-19/Thailand/NIC_BKK_7324/2023 | K | 529 | stop | 84 | 20230705 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | K | 529 | V | 5 | 20220928 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | K | 529 | M | 1 | 20220804 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | K | 529 | F | 1 | 20210521 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 529 | L | 6 | 20221229 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 529 | S | 7 | 20230410 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | K | 529 | insCstopRKLstopE | 1 | 20220721 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | K | 529 | N | 13 | 20231212 |
| EPI_ISL_17463053 | NSP3 | hCoV-19/USA/ID-IBL-878698/2023 | K | 529 | insVstop | 27 | 20230314 |
| EPI_ISL_13829382 | NSP3 | hCoV-19/USA/ID-IBL-832972/2022 | K | 529 | I | 3 | 20220629 |
| EPI_ISL_16253578 | NSP3 | hCoV-19/Trinidad and Tobago/405764/2022 | K | 529 | insKVstop | 4 | 20221202 |
| EPI_ISL_19441104 | NSP3 | hCoV-19/France/HDF-IPP10443/2024 | K | 529 | E | 31 | 20240909 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 529 | R | 227 | 20250116 |
| EPI_ISL_19470177 | NSP3 | hCoV-19/env/Ukraine/84708/2024 | K | 529 | del | 93 | 20240125 |
| EPI_ISL_14546540 | NSP3 | hCoV-19/Denmark/DCGC-566146/2022 | K | 529 | W | 2 | 20220801 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | K | 529 | P | 1 | 20211006 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 529 | A | 1 | 20220210 |
| EPI_ISL_18849922 | NSP3 | hCoV-19/Japan/PG-589700/2023 | K | 529 | T | 7 | 20231226 |
| EPI_ISL_18295224 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14719/2023 | K | 529 | insSV | 1 | 20230913 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | K | 529 | insstop | 1 | 20230404 |
| EPI_ISL_13622822 | NSP3 | hCoV-19/Turkey/HSGM-IST-02760/2022 | K | 529 | Q | 4 | 20220623 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 529 | G | 1 | 20220210 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | K | 530 | I | 1 | 20220110 |
| EPI_ISL_15388070 | NSP3 | hCoV-19/Morocco/FMP411/2021 | K | 530 | G | 2 | 20211227 |
| EPI_ISL_19801650 | NSP3 | hCoV-19/Brazil/RR-IEC-25-008913/2025 | K | 530 | N | 822 | 20250313 |
| EPI_ISL_17390167 | NSP3 | hCoV-19/Denmark/DCGC-645218/2023 | K | 530 | Q | 90 | 20230327 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 530 | V | 5 | 20230108 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 530 | L | 3 | 20220210 |
| EPI_ISL_15693030 | NSP3 | hCoV-19/USA/ID-IBL-861490/2022 | K | 530 | stop | 15 | 20221023 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | K | 530 | insG | 1 | 20230217 |
| EPI_ISL_19532556 | NSP3 | hCoV-19/Canada/AB-ABPHL-125827/2024 | K | 530 | T | 57 | 20241013 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 530 | A | 2 | 20250116 |
| EPI_ISL_19470177 | NSP3 | hCoV-19/env/Ukraine/84708/2024 | K | 530 | del | 90 | 20240125 |
| EPI_ISL_19760367 | NSP3 | hCoV-19/USA/NJ-CDC-LC1133424/2025 | K | 530 | R | 673 | 20250219 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 530 | D | 3 | 20230410 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | K | 530 | H | 13 | 20230217 |
| EPI_ISL_18721182 | NSP3 | hCoV-19/USA/IA-SHL-2379666/2023 | K | 530 | M | 12 | 20231226 |
| EPI_ISL_19512889 | NSP3 | hCoV-19/Canada/ON-KHS-05082-v1/2024 | K | 530 | E | 220 | 20241021 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | K | 530 | F | 1 | 20220210 |
| EPI_ISL_3556898 | NSP3 | hCoV-19/USA/ID-IBL-635748/2020 | K | 530 | insV | 1 | 20200724 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | K | 530 | S | 260 | 20240701 |
| EPI_ISL_17463054 | NSP3 | hCoV-19/USA/ID-IBL-878853/2023 | C | 531 | stop | 13 | 20230314 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | C | 531 | H | 1 | 20210809 |
| EPI_ISL_18295224 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14719/2023 | C | 531 | insFL | 5 | 20230913 |
| EPI_ISL_19092396 | NSP3 | hCoV-19/USA/UT-UPHL-240124763579/2023 | C | 531 | Y | 206 | 20231213 |
| EPI_ISL_14217763 | NSP3 | hCoV-19/France/IDF-AphpSA-MB000878/2022 | C | 531 | insQQLWKKLSSSQ | 3 | 20220718 |
| EPI_ISL_19470177 | NSP3 | hCoV-19/env/Ukraine/84708/2024 | C | 531 | del | 91 | 20240125 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | C | 531 | A | 3 | 20220623 |
| EPI_ISL_9356708 | NSP3 | hCoV-19/USA/ID-IBL-786574/2022 | C | 531 | insLL | 25 | 20220105 |
| EPI_ISL_19750976 | NSP3 | hCoV-19/Germany/BE-RKI-I-1147756/2025 | C | 531 | S | 117 | 20250204 |
| EPI_ISL_14546540 | NSP3 | hCoV-19/Denmark/DCGC-566146/2022 | C | 531 | W | 1 | 20220801 |
| EPI_ISL_3078842 | NSP3 | hCoV-19/England/OXON-FA114B/2021 | C | 531 | M | 1 | 20210702 |
| EPI_ISL_19280909 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284570/2024 | C | 531 | V | 321 | 20240703 |
| EPI_ISL_12754228 | NSP3 | hCoV-19/USA/MS-MSPHL-178/2021 | C | 531 | Q | 1 | 20210805 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | C | 531 | L | 9 | 20230330 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | C | 531 | G | 9 | 20250116 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | C | 531 | K | 2 | 20221213 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | C | 531 | insLLH | 3 | 20210809 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | C | 531 | insLI | 1 | 20220804 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | C | 531 | insL | 3 | 20220928 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | C | 531 | F | 58 | 20231212 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | C | 531 | T | 8 | 20221229 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | C | 531 | E | 5 | 20230404 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | C | 531 | I | 4 | 20230410 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | C | 531 | D | 1 | 20230217 |
| EPI_ISL_4261933 | NSP3 | hCoV-19/USA/CA-UCSF-CC405/2021 | C | 531 | insLHVVGPNVNKGEDIQLL | 1 | 20210506 |
| EPI_ISL_13856384 | NSP3 | hCoV-19/USA/VA-VCUVAS3-TLEA385926/2022 | C | 531 | R | 10 | 20220603 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | K | 532 | P | 38 | 20230406 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | K | 532 | L | 19 | 20231212 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 532 | E | 195 | 20250116 |
| EPI_ISL_3532970 | NSP3 | hCoV-19/India/AN-ICMR-NIV-INSACOG-GSEQ-4939/2021 | K | 532 | A | 2 | 20210328 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 532 | D | 3 | 20230410 |
| EPI_ISL_19192575 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15955/2024 | K | 532 | insVLLH | 3 | 20240304 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | K | 532 | insVP | 76 | 20220205 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | K | 532 | Q | 11 | 20230404 |
| EPI_ISL_14881054 | NSP3 | hCoV-19/USA/ID-IBL-846130/2022 | K | 532 | insV | 3 | 20220815 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | K | 532 | F | 8 | 20230214 |
| EPI_ISL_18295225 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14720/2023 | K | 532 | insCFLH | 3 | 20230913 |
| EPI_ISL_12694393 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471037/2022 | K | 532 | insVPLH | 31 | 20220126 |
| EPI_ISL_5070034 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-45455/2021 | K | 532 | insCLLH | 2 | 20210503 |
| EPI_ISL_19280909 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284570/2024 | K | 532 | stop | 33 | 20240703 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | K | 532 | insVK | 1 | 20210521 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | K | 532 | I | 13 | 20220725 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | K | 532 | insstop | 1 | 20221121 |
| EPI_ISL_19470177 | NSP3 | hCoV-19/env/Ukraine/84708/2024 | K | 532 | del | 124 | 20240125 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | K | 532 | S | 7 | 20220804 |
| EPI_ISL_18295224 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14719/2023 | K | 532 | H | 32 | 20230913 |
| EPI_ISL_16012970 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-118771/2022 | K | 532 | V | 6 | 20221124 |
| EPI_ISL_13812286 | NSP3 | hCoV-19/USA/ID-IBL-831852/2022 | K | 532 | Y | 1 | 20220606 |
| EPI_ISL_19771568 | NSP3 | hCoV-19/USA/NY-PRL-250304_81A07/2025 | K | 532 | R | 292 | 20250220 |
| EPI_ISL_18884237 | NSP3 | hCoV-19/Malaysia/MKAK_CL_2659/2024 | K | 532 | N | 138 | 20240103 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | K | 532 | insVL | 29 | 20240712 |
| EPI_ISL_16323049 | NSP3 | hCoV-19/USA/CA-CDC-STM-JBNR3FNHJ/2022 | K | 532 | T | 29 | 20221215 |
| EPI_ISL_19035482 | NSP3 | hCoV-19/Ghana/FS-1268/2021 | K | 532 | insVX | 1 | 20210707 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 533 | A | 2 | 20250116 |
| EPI_ISL_17591891 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3244/2023 | S | 533 | K | 35 | 20230418 |
| EPI_ISL_14061583 | NSP3 | hCoV-19/Cabo Verde/FG711/2022 | S | 533 | insXF | 1 | 20220624 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | S | 533 | L | 9 | 20230217 |
| EPI_ISL_17162912 | NSP3 | hCoV-19/USA/ID-IBL-876968/2023 | S | 533 | insLF | 7 | 20230220 |
| EPI_ISL_18326228 | NSP3 | hCoV-19/Spain/EX-BA_18600803/2023 | S | 533 | C | 35 | 20230918 |
| EPI_ISL_19280434 | NSP3 | hCoV-19/Italy/LOM-UNIBS-07169705/2024 | S | 533 | R | 38 | 20240715 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 533 | stop | 4 | 20230404 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | S | 533 | D | 2 | 20230905 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | S | 533 | N | 112 | 20230330 |
| EPI_ISL_15693017 | NSP3 | hCoV-19/USA/ID-IBL-861143/2022 | S | 533 | insF | 1 | 20221019 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | S | 533 | T | 51 | 20230406 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | S | 533 | del | 147 | 20231009 |
| EPI_ISL_18951451 | NSP3 | hCoV-19/USA/MS-MSPHL-0168/2024 | S | 533 | V | 87 | 20240216 |
| EPI_ISL_19761607 | NSP3 | hCoV-19/USA/NY-URMC-P3S1U043-1/2025 | S | 533 | G | 240 | 20250123 |
| EPI_ISL_12694365 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467995/2022 | S | 533 | insPF | 28 | 20220124 |
| EPI_ISL_16049835 | NSP3 | hCoV-19/USA/ID-IBL-864328/2022 | S | 533 | Q | 4 | 20221110 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | S | 533 | H | 13 | 20230217 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | S | 533 | I | 11 | 20231212 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | S | 533 | F | 149 | 20240712 |
| EPI_ISL_19202685 | NSP3 | hCoV-19/USA/MD-MDH-9747/2023 | S | 533 | insVF | 4 | 20231219 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | S | 533 | E | 3 | 20230222 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | A | 534 | insDNN | 1 | 20220725 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | A | 534 | del | 111 | 20231009 |
| EPI_ISL_19829184 | NSP3 | hCoV-19/USA/AL-CDC-LC1136473/2025 | A | 534 | T | 1836 | 20250403 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | A | 534 | K | 4 | 20221213 |
| EPI_ISL_13812273 | NSP3 | hCoV-19/USA/ID-IBL-831538/2022 | A | 534 | I | 5 | 20220624 |
| EPI_ISL_17591891 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3244/2023 | A | 534 | insLFT | 1 | 20230418 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | A | 534 | insAFT | 1 | 20210806 |
| EPI_ISL_16259573 | NSP3 | hCoV-19/Switzerland/GE-DIA-161604031601/2022 | A | 534 | H | 26 | 20221205 |
| EPI_ISL_2628228 | NSP3 | hCoV-19/USA/AZ-ASPHL-2027/2021 | A | 534 | insSYSFT | 3 | 20210317 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | A | 534 | insstopKVPFT | 1 | 20210804 |
| EPI_ISL_2205034 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-38088/2021 | A | 534 | insFS | 1 | 20210326 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | A | 534 | R | 2 | 20210918 |
| EPI_ISL_13040972 | NSP3 | hCoV-19/USA/NY-PRL-220518_02H02/2022 | A | 534 | G | 9 | 20220517 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 534 | Y | 1 | 20220210 |
| EPI_ISL_19814324 | NSP3 | hCoV-19/Luxembourg/LNS5065534/2025 | A | 534 | S | 207 | 20250212 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | A | 534 | stop | 2 | 20230213 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 534 | E | 3 | 20221229 |
| EPI_ISL_18951451 | NSP3 | hCoV-19/USA/MS-MSPHL-0168/2024 | A | 534 | P | 64 | 20240216 |
| EPI_ISL_18664570 | NSP3 | hCoV-19/USA/WV-WVU-WV138541/2023 | A | 534 | F | 4 | 20231024 |
| EPI_ISL_15681715 | NSP3 | hCoV-19/Turkey/KSS-HEEAH4845949576/2022 | A | 534 | L | 9 | 20221025 |
| EPI_ISL_17284582 | NSP3 | hCoV-19/England/PHEP-YYGXTZH/2023 | A | 534 | C | 31 | 20230307 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | A | 534 | insFT | 528 | 20240719 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | A | 534 | Q | 5 | 20230217 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | A | 534 | D | 70 | 20230406 |
| EPI_ISL_19795074 | NSP3 | hCoV-19/French Guiana/IPG202500039/2025 | A | 534 | V | 17364 | 20250312 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 534 | insN | 1 | 20250116 |
| EPI_ISL_9152507 | NSP3 | hCoV-19/USA/AZ-TG1169724/2021 | A | 534 | insA | 1 | 20211220 |
| EPI_ISL_19351742 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242725/2024 | F | 535 | L | 202 | 20240706 |
| EPI_ISL_15388070 | NSP3 | hCoV-19/Morocco/FMP411/2021 | F | 535 | K | 3 | 20211227 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | F | 535 | Y | 16 | 20230404 |
| EPI_ISL_15681715 | NSP3 | hCoV-19/Turkey/KSS-HEEAH4845949576/2022 | F | 535 | insT | 1 | 20221025 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | F | 535 | insHS | 1 | 20210812 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | F | 535 | N | 33 | 20230406 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | F | 535 | E | 1 | 20221229 |
| EPI_ISL_13812286 | NSP3 | hCoV-19/USA/ID-IBL-831852/2022 | F | 535 | T | 10 | 20220606 |
| EPI_ISL_16762158 | NSP3 | hCoV-19/USA/TX-HMH-M-123629/2023 | F | 535 | S | 39 | 20230115 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | F | 535 | G | 2 | 20221213 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | F | 535 | P | 2 | 20230905 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 535 | A | 1 | 20220210 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | F | 535 | insTFstopQ | 1 | 20200803 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | F | 535 | V | 26 | 20230222 |
| EPI_ISL_17546509 | NSP3 | hCoV-19/USA/ID-IBL-881142/2023 | F | 535 | insTF | 145 | 20230403 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | F | 535 | Q | 1 | 20220110 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | F | 535 | C | 11 | 20220725 |
| EPI_ISL_19192575 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15955/2024 | F | 535 | I | 87 | 20240304 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | F | 535 | del | 123 | 20231009 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | Y | 536 | L | 7 | 20230217 |
| EPI_ISL_16049835 | NSP3 | hCoV-19/USA/ID-IBL-864328/2022 | Y | 536 | insstop | 1 | 20221110 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | Y | 536 | G | 1 | 20220210 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 536 | C | 123 | 20250116 |
| EPI_ISL_1703639 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-VOC-640/2020 | Y | 536 | Q | 1 | 20201127 |
| EPI_ISL_7832654 | NSP3 | hCoV-19/USA/ID-IBL-774844/2021 | Y | 536 | T | 45 | 20211203 |
| EPI_ISL_435059 | NSP3 | hCoV-19/South Africa/R05475/2020 | Y | 536 | stop | 1 | 20200320 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | Y | 536 | insNNI | 1 | 20230404 |
| EPI_ISL_13812286 | NSP3 | hCoV-19/USA/ID-IBL-831852/2022 | Y | 536 | W | 1 | 20220606 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | Y | 536 | del | 114 | 20231009 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | Y | 536 | insNH | 1 | 20210701 |
| EPI_ISL_19456680 | NSP3 | hCoV-19/Japan/FR014-0357/2024 | Y | 536 | F | 9 | 20240911 |
| EPI_ISL_19469195 | NSP3 | hCoV-19/env/Ukraine/86427/2024 | Y | 536 | H | 400 | 20240716 |
| EPI_ISL_10552081 | NSP3 | hCoV-19/Finland/THL-202135050/2021 | Y | 536 | D | 2 | 20211229 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Y | 536 | I | 2 | 20221229 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Y | 536 | E | 8 | 20220509 |
| EPI_ISL_12320462 | NSP3 | hCoV-19/Turkey/HSGM-GS1964/2022 | Y | 536 | N | 6 | 20220401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 536 | S | 4 | 20220210 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | Y | 536 | V | 1 | 20210316 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | I | 537 | K | 1 | 20211006 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | I | 537 | del | 105 | 20231009 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 537 | C | 1 | 20220210 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | I | 537 | H | 879 | 20240719 |
| EPI_ISL_19608852 | NSP3 | hCoV-19/Netherlands/NB-RIVM-144451/2024 | I | 537 | V | 253 | 20241126 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | I | 537 | L | 20 | 20221121 |
| EPI_ISL_16049835 | NSP3 | hCoV-19/USA/ID-IBL-864328/2022 | I | 537 | P | 1 | 20221110 |
| EPI_ISL_19192575 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15955/2024 | I | 537 | Y | 71 | 20240304 |
| EPI_ISL_4308999 | NSP3 | hCoV-19/England/PHEC-Y308Y81C/2021 | I | 537 | insH | 1 | 20210916 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 537 | A | 1 | 20250116 |
| EPI_ISL_19351742 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242725/2024 | I | 537 | S | 13 | 20240706 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | I | 537 | F | 52 | 20231212 |
| EPI_ISL_14506940 | NSP3 | hCoV-19/Japan/RIMD12242/2022 | I | 537 | T | 14 | 20220713 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | I | 537 | N | 8 | 20220509 |
| EPI_ISL_11112556 | NSP3 | hCoV-19/Lithuania/LSMULKKGMMK36C81/2022 | I | 537 | M | 6 | 20220219 |
| EPI_ISL_16542863 | NSP3 | hCoV-19/USA/TX-HMH-M-122549/2023 | I | 537 | insYH | 4 | 20230105 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | I | 537 | E | 1 | 20230104 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | L | 538 | A | 3 | 20220725 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | L | 538 | K | 2 | 20221121 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | L | 538 | F | 2 | 20210525 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | L | 538 | del | 96 | 20231009 |
| EPI_ISL_12141176 | NSP3 | hCoV-19/England/PHEC-YYRQMT1/2022 | L | 538 | J | 4 | 20220402 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | L | 538 | M | 1 | 20210730 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 538 | R | 3 | 20230104 |
| EPI_ISL_15377059 | NSP3 | hCoV-19/USA/ID-IBL-857506/2022 | L | 538 | Y | 46 | 20220921 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | L | 538 | G | 13 | 20230217 |
| EPI_ISL_19822435 | NSP3 | hCoV-19/Japan/FR018-0008/2025 | L | 538 | T | 43 | 20250303 |
| EPI_ISL_13829377 | NSP3 | hCoV-19/USA/ID-IBL-832966/2022 | L | 538 | N | 1 | 20220629 |
| EPI_ISL_17744693 | NSP3 | hCoV-19/Yunnan/YNCDC-0830/2023 | L | 538 | I | 21 | 20230520 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | L | 538 | stop | 3 | 20220721 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 538 | E | 1 | 20220210 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 538 | S | 21 | 20221229 |
| EPI_ISL_18906741 | NSP3 | hCoV-19/USA/NV-NSPHL-23-S004251/2023 | L | 538 | Q | 29 | 20230714 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | L | 538 | V | 17 | 20230905 |
| EPI_ISL_19242878 | NSP3 | hCoV-19/Israel/SMC-7117714/2024 | L | 538 | P | 10 | 20240623 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | P | 539 | V | 1 | 20220210 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | P | 539 | H | 53 | 20230403 |
| EPI_ISL_10819541 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-78425/2022 | P | 539 | insLL | 1 | 20220111 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | P | 539 | E | 3 | 20230104 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | P | 539 | del | 137 | 20231009 |
| EPI_ISL_18098346 | NSP3 | hCoV-19/Kenya/KNPHLGEN092/2021 | P | 539 | insS | 1 | 20211214 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | P | 539 | T | 20 | 20220725 |
| EPI_ISL_13346206 | NSP3 | hCoV-19/USA/ID-IBL-824087/2022 | P | 539 | insLRGNH | 1 | 20220531 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | P | 539 | G | 2 | 20230905 |
| EPI_ISL_16049835 | NSP3 | hCoV-19/USA/ID-IBL-864328/2022 | P | 539 | K | 3 | 20221110 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 539 | Y | 1 | 20210318 |
| EPI_ISL_8323633 | NSP3 | hCoV-19/Canada/ON-PHL-21-47400/2021 | P | 539 | A | 8 | 20211210 |
| EPI_ISL_19799837 | NSP3 | hCoV-19/USA/TX-HMH-M-147192/2024 | P | 539 | S | 407 | 20241227 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | P | 539 | L | 934 | 20240719 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | P | 539 | I | 12 | 20250116 |
| EPI_ISL_19819862 | NSP3 | hCoV-19/Spain/AS-HUCA-232523861/2025 | P | 539 | Q | 13 | 20250324 |
| EPI_ISL_19192575 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15955/2024 | P | 539 | stop | 53 | 20240304 |
| EPI_ISL_16736375 | NSP3 | hCoV-19/Singapore/R7MR4/2023 | P | 539 | R | 3 | 20230124 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | S | 540 | E | 1 | 20230104 |
| EPI_ISL_19042026 | NSP3 | hCoV-19/Lithuania/MB231129_0140/2023 | S | 540 | F | 55 | 20231123 |
| EPI_ISL_19351742 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242725/2024 | S | 540 | Y | 58 | 20240706 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | S | 540 | G | 2 | 20211015 |
| EPI_ISL_14588255 | NSP3 | hCoV-19/USA/ID-IBL-844143/2022 | S | 540 | H | 3 | 20220808 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | S | 540 | N | 15 | 20230217 |
| EPI_ISL_15377059 | NSP3 | hCoV-19/USA/ID-IBL-857506/2022 | S | 540 | I | 3 | 20220921 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | S | 540 | Q | 2 | 20220804 |
| EPI_ISL_3759989 | NSP3 | hCoV-19/USA/ID-IBL-747479/2021 | S | 540 | R | 1 | 20210809 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 540 | L | 22 | 20250116 |
| EPI_ISL_14217763 | NSP3 | hCoV-19/France/IDF-AphpSA-MB000878/2022 | S | 540 | insMAIFIQIL | 3 | 20220718 |
| EPI_ISL_19012681 | NSP3 | hCoV-19/Canada/BC-BCCDC-704959/2024 | S | 540 | P | 12 | 20240302 |
| EPI_ISL_14972869 | NSP3 | hCoV-19/USA/UT-UPHL-220912135473/2022 | S | 540 | C | 1 | 20220714 |
| EPI_ISL_18936207 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00052/2023 | S | 540 | A | 35 | 20230412 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | S | 540 | stop | 51 | 20220928 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | S | 540 | D | 2 | 20230905 |
| EPI_ISL_19822435 | NSP3 | hCoV-19/Japan/FR018-0008/2025 | S | 540 | T | 11 | 20250303 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | S | 540 | del | 128 | 20231009 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 541 | A | 1 | 20250116 |
| EPI_ISL_18463528 | NSP3 | hCoV-19/USA/OH-ODH-SC3033036/2023 | I | 541 | F | 6 | 20231016 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | I | 541 | M | 6 | 20230217 |
| EPI_ISL_14298911 | NSP3 | hCoV-19/Turkey/HSGM-IST-03668/2022 | I | 541 | N | 9 | 20220702 |
| EPI_ISL_17838479 | NSP3 | hCoV-19/India/MH-ICMR-NIV-PID0054-3/2020 | I | 541 | insYY | 3 | 20201126 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | I | 541 | del | 126 | 20231009 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | I | 541 | stop | 4 | 20230213 |
| EPI_ISL_17653881 | NSP3 | hCoV-19/USA/NY-NYULH-14657/2023 | I | 541 | S | 8 | 20230428 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | I | 541 | L | 930 | 20240719 |
| EPI_ISL_19199461 | NSP3 | hCoV-19/USA/CA-CDPH-500137013/2024 | I | 541 | T | 83 | 20240423 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | I | 541 | C | 2 | 20230404 |
| EPI_ISL_3759988 | NSP3 | hCoV-19/USA/ID-IBL-747478/2021 | I | 541 | insIL | 1 | 20210809 |
| EPI_ISL_8804034 | NSP3 | hCoV-19/India/GA-NCCS-211940071/2021 | I | 541 | Q | 1 | 20210713 |
| EPI_ISL_19351742 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242725/2024 | I | 541 | Y | 63 | 20240706 |
| EPI_ISL_11209522 | NSP3 | hCoV-19/Denmark/DCGC-432250/2022 | I | 541 | J | 1 | 20220131 |
| EPI_ISL_19645943 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015506/2024 | I | 541 | V | 1028 | 20241112 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | I | 541 | D | 1 | 20230104 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | I | 541 | E | 52 | 20220928 |
| EPI_ISL_14588254 | NSP3 | hCoV-19/USA/ID-IBL-844142/2022 | I | 542 | insYY | 1 | 20220808 |
| EPI_ISL_18982517 | NSP3 | hCoV-19/South Korea/KDCA287358/2024 | I | 542 | S | 251 | 20240219 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | I | 542 | insDSYYS | 1 | 20210918 |
| EPI_ISL_19351742 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242725/2024 | I | 542 | L | 92 | 20240706 |
| EPI_ISL_19824801 | NSP3 | hCoV-19/Japan/EIS11-840/2025 | I | 542 | T | 580 | 20250302 |
| EPI_ISL_18454260 | NSP3 | hCoV-19/Thailand/NIC_BKK_SJRV951/2023 | I | 542 | J | 3 | 20230816 |
| EPI_ISL_19622769 | NSP3 | hCoV-19/New Zealand/24YA7418/2024 | I | 542 | V | 515 | 20241109 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | I | 542 | G | 1 | 20221121 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | I | 542 | stop | 5 | 20230213 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | I | 542 | R | 2 | 20230104 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | I | 542 | F | 14 | 20230404 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 542 | Y | 6 | 20250116 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | I | 542 | insYYLstopstop | 1 | 20220810 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | I | 542 | E | 1 | 20210521 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | I | 542 | M | 894 | 20240719 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | I | 542 | A | 56 | 20220928 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | I | 542 | del | 147 | 20231009 |
| EPI_ISL_19068903 | NSP3 | hCoV-19/USA/CO-CDPHE-41825778/2024 | I | 542 | N | 23 | 20240405 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | I | 542 | insLM | 1 | 20220725 |
| EPI_ISL_15388070 | NSP3 | hCoV-19/Morocco/FMP411/2021 | I | 542 | P | 1 | 20211227 |
| EPI_ISL_14339924 | NSP3 | hCoV-19/Japan/PG-278657/2022 | I | 542 | K | 1 | 20220708 |
| EPI_ISL_14333186 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-95602/2022 | S | 543 | I | 5 | 20220722 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | S | 543 | R | 939 | 20240719 |
| EPI_ISL_19739323 | NSP3 | hCoV-19/USA/NJ-CDC-LC1131327/2025 | S | 543 | F | 1895 | 20250202 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 543 | C | 17 | 20250116 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | S | 543 | del | 121 | 20231009 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 543 | W | 1 | 20210318 |
| EPI_ISL_7509667 | NSP3 | hCoV-19/USA/CA-CSMC549/2020 | S | 543 | N | 1 | 20201006 |
| EPI_ISL_19802216 | NSP3 | hCoV-19/USA/CA-PFZ04886/2025 | S | 543 | A | 504 | 20250313 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | S | 543 | K | 17 | 20230410 |
| EPI_ISL_19290170 | NSP3 | hCoV-19/USA/AZ-CDC-LC1109685/2024 | S | 543 | T | 88 | 20240708 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | S | 543 | E | 6 | 20230213 |
| EPI_ISL_19351742 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242725/2024 | S | 543 | stop | 60 | 20240706 |
| EPI_ISL_19106257 | NSP3 | hCoV-19/USA/OK-OKPHL0028706/2024 | S | 543 | Y | 86 | 20240221 |
| EPI_ISL_3760031 | NSP3 | hCoV-19/USA/ID-IBL-747327/2021 | S | 543 | M | 1 | 20210805 |
| EPI_ISL_18098346 | NSP3 | hCoV-19/Kenya/KNPHLGEN092/2021 | S | 543 | insF | 1 | 20211214 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | S | 543 | L | 11 | 20230222 |
| EPI_ISL_14881060 | NSP3 | hCoV-19/USA/ID-IBL-846235/2022 | S | 543 | D | 2 | 20220816 |
| EPI_ISL_19646339 | NSP3 | hCoV-19/Australia/QLD0x014F91/2024 | S | 543 | P | 6950 | 20241218 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | S | 543 | V | 1 | 20210521 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | N | 544 | Q | 2 | 20230217 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | N | 544 | F | 2 | 20220110 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | N | 544 | T | 2 | 20220804 |
| EPI_ISL_14333186 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-95602/2022 | N | 544 | P | 4 | 20220722 |
| EPI_ISL_16236621 | NSP3 | hCoV-19/England/LSPA-3262CBB3/2022 | N | 544 | B | 3 | 20221210 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | N | 544 | R | 7 | 20230104 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | N | 544 | Y | 34 | 20230406 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | N | 544 | C | 1 | 20220210 |
| EPI_ISL_18689862 | NSP3 | hCoV-19/USA/TX-HMH-M-136140/2023 | N | 544 | K | 10 | 20231209 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | N | 544 | V | 3 | 20230217 |
| EPI_ISL_17530385 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13881/2023 | N | 544 | stop | 57 | 20230403 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | N | 544 | L | 6 | 20221229 |
| EPI_ISL_14224102 | NSP3 | hCoV-19/USA/ID-IBL-835609/2022 | N | 544 | E | 3 | 20220708 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | N | 544 | S | 891 | 20240719 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | N | 544 | A | 5 | 20230213 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | N | 544 | M | 11 | 20230222 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | N | 544 | del | 122 | 20231009 |
| EPI_ISL_1012180 | NSP3 | hCoV-19/England/CAMC-1253977/2021 | N | 544 | insSIISN | 1 | 20210209 |
| EPI_ISL_12005434 | NSP3 | hCoV-19/Thailand/NIC_TRG_13944/2022 | N | 544 | D | 3 | 20220315 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | N | 544 | G | 14 | 20230217 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | N | 544 | W | 2 | 20211015 |
| EPI_ISL_9074703 | NSP3 | hCoV-19/USA/FL-CDC-ASC210595547/2022 | N | 544 | I | 4 | 20220104 |
| EPI_ISL_12582717 | NSP3 | hCoV-19/Turkey/HSGM-G8459/2022 | N | 544 | H | 6 | 20220401 |
| EPI_ISL_11831649 | NSP3 | hCoV-19/England/LSPA-3D02C22/2022 | E | 545 | Z | 3 | 20220323 |
| EPI_ISL_17420723 | NSP3 | hCoV-19/USA/CA-CDPH-500106478/2023 | E | 545 | Q | 11 | 20230222 |
| EPI_ISL_19824385 | NSP3 | hCoV-19/Mexico/CMX-INER-INMEGEN-3215/2025 | E | 545 | D | 535 | 20250321 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | E | 545 | del | 170 | 20231009 |
| EPI_ISL_18936207 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00052/2023 | E | 545 | S | 14 | 20230412 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | E | 545 | L | 2 | 20230104 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 545 | I | 1 | 20220210 |
| EPI_ISL_19556943 | NSP3 | hCoV-19/Spain/MD-H12O_415/2024 | E | 545 | V | 46 | 20241025 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | E | 545 | F | 1 | 20220928 |
| EPI_ISL_17474974 | NSP3 | hCoV-19/Sweden/03_SE600_000200506930N2/2022 | E | 545 | stop | 11 | 20221215 |
| EPI_ISL_14608905 | NSP3 | hCoV-19/USA/TX-HMH-M-112097/2022 | E | 545 | M | 3 | 20220813 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | E | 545 | N | 4 | 20221229 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 545 | K | 1024 | 20250116 |
| EPI_ISL_19673480 | NSP3 | hCoV-19/USA/NY-NYULH-21834/2025 | E | 545 | G | 1732 | 20250106 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | E | 545 | R | 19 | 20230222 |
| EPI_ISL_14333186 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-95602/2022 | E | 545 | T | 3 | 20220722 |
| EPI_ISL_19642757 | NSP3 | hCoV-19/Australia/WA16629/2024 | E | 545 | A | 382 | 20241215 |
| EPI_ISL_15388070 | NSP3 | hCoV-19/Morocco/FMP411/2021 | E | 545 | Y | 2 | 20211227 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | E | 545 | H | 2 | 20210316 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | E | 545 | P | 31 | 20230406 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 546 | W | 2 | 20221229 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | K | 546 | insFL | 385 | 20240719 |
| EPI_ISL_19650661 | NSP3 | hCoV-19/Sweden/W-50538076LX/2024 | K | 546 | R | 272 | 20241218 |
| EPI_ISL_14253467 | NSP3 | hCoV-19/USA/ID-IBL-838523/2022 | K | 546 | stop | 9 | 20220720 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | K | 546 | D | 14 | 20230217 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | K | 546 | del | 169 | 20231009 |
| EPI_ISL_15429364 | NSP3 | hCoV-19/France/ARA-CHUGA-2101334471/2022 | K | 546 | insFX | 1 | 20221013 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | K | 546 | Q | 7 | 20230905 |
| EPI_ISL_15681715 | NSP3 | hCoV-19/Turkey/KSS-HEEAH4845949576/2022 | K | 546 | F | 7 | 20221025 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | K | 546 | insFWNCF | 1 | 20210806 |
| EPI_ISL_3305452 | NSP3 | hCoV-19/USA/NV-CDC-ASC210111942/2021 | K | 546 | M | 2 | 20210707 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 546 | T | 5 | 20250116 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 546 | A | 55 | 20230410 |
| EPI_ISL_17474974 | NSP3 | hCoV-19/Sweden/03_SE600_000200506930N2/2022 | K | 546 | E | 10 | 20221215 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 546 | L | 3 | 20230104 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | K | 546 | S | 16 | 20230222 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | K | 546 | G | 34 | 20230406 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 546 | V | 1 | 20210318 |
| EPI_ISL_5346688 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-59041/2021 | K | 546 | insXL | 1 | 20210826 |
| EPI_ISL_19473845 | NSP3 | hCoV-19/South Korea/KDCA295893/2024 | K | 546 | N | 464 | 20240910 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | K | 546 | I | 2 | 20230217 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Q | 547 | S | 5 | 20221229 |
| EPI_ISL_17474974 | NSP3 | hCoV-19/Sweden/03_SE600_000200506930N2/2022 | Q | 547 | A | 8 | 20221215 |
| EPI_ISL_18074242 | NSP3 | hCoV-19/Liaoning/LNCDC-250-2/2023 | Q | 547 | L | 99 | 20230703 |
| EPI_ISL_18423803 | NSP3 | hCoV-19/USA/TX-HMH-134776/2023 | Q | 547 | del | 441 | 20231009 |
| EPI_ISL_19383680 | NSP3 | hCoV-19/Japan/FR088-0185/2024 | Q | 547 | K | 43 | 20240815 |
| EPI_ISL_19662346 | NSP3 | hCoV-19/Singapore/R67MQ156/2024 | Q | 547 | R | 222 | 20241217 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | Q | 547 | N | 3 | 20221121 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | Q | 547 | E | 411 | 20240719 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | Q | 547 | insCGHFN | 1 | 20230217 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | Q | 547 | M | 2 | 20230217 |
| EPI_ISL_19108340 | NSP3 | hCoV-19/Turkey/HSGM-AA000233/2024 | Q | 547 | P | 58 | 20240213 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | Q | 547 | T | 1 | 20200807 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | Q | 547 | I | 17 | 20230217 |
| EPI_ISL_19460290 | NSP3 | hCoV-19/Canada/AB-ABPHL-123711/2024 | Q | 547 | stop | 20 | 20240921 |
| EPI_ISL_18998661 | NSP3 | hCoV-19/Ukraine/84982/2024 | Q | 547 | H | 60 | 20240215 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | Q | 547 | F | 9 | 20230213 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Q | 547 | V | 1 | 20250116 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | E | 548 | L | 390 | 20240719 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | E | 548 | P | 1 | 20210802 |
| EPI_ISL_18936207 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00052/2023 | E | 548 | Q | 20 | 20230412 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | E | 548 | F | 1 | 20210805 |
| EPI_ISL_18981277 | NSP3 | hCoV-19/USA/TX-HMH-M-139784/2024 | E | 548 | del | 475 | 20240217 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 548 | G | 66 | 20250116 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | E | 548 | Y | 3 | 20230410 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | E | 548 | N | 59 | 20230220 |
| EPI_ISL_18916855 | NSP3 | hCoV-19/Sweden/BD-2A87885830000/2024 | E | 548 | D | 20 | 20240103 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | E | 548 | V | 4 | 20230217 |
| EPI_ISL_17530358 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13977/2023 | E | 548 | stop | 7 | 20230406 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | E | 548 | insNISstopADNNC | 1 | 20210316 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | E | 548 | S | 3 | 20220804 |
| EPI_ISL_1730529 | NSP3 | hCoV-19/England/OXON-F7F6A1/2021 | E | 548 | insW | 1 | 20210215 |
| EPI_ISL_19385914 | NSP3 | hCoV-19/Germany/BY-MVP-000024708/2024 | E | 548 | A | 64 | 20240802 |
| EPI_ISL_12547979 | NSP3 | hCoV-19/England/QEUH-3DD57BE/2022 | E | 548 | Z | 4 | 20220425 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | E | 548 | C | 2 | 20221121 |
| EPI_ISL_17260615 | NSP3 | hCoV-19/USA/ID-IBL-877858/2023 | E | 548 | K | 37 | 20230222 |
| EPI_ISL_17474974 | NSP3 | hCoV-19/Sweden/03_SE600_000200506930N2/2022 | E | 548 | R | 6 | 20221215 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | E | 548 | H | 3 | 20221201 |
| EPI_ISL_12694326 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467570/2022 | I | 549 | insLELF | 1 | 20220125 |
| EPI_ISL_15681715 | NSP3 | hCoV-19/Turkey/KSS-HEEAH4845949576/2022 | I | 549 | insF | 3 | 20221025 |
| EPI_ISL_19824832 | NSP3 | hCoV-19/Spain/PV-HUD-97055577/2025 | I | 549 | L | 4937 | 20250407 |
| EPI_ISL_18981277 | NSP3 | hCoV-19/USA/TX-HMH-M-139784/2024 | I | 549 | del | 531 | 20240217 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | I | 549 | R | 2 | 20221201 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | I | 549 | D | 1 | 20210525 |
| EPI_ISL_19646339 | NSP3 | hCoV-19/Australia/QLD0x014F91/2024 | I | 549 | V | 353 | 20241218 |
| EPI_ISL_19826673 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528540/2025 | I | 549 | J | 42 | 20250326 |
| EPI_ISL_13829377 | NSP3 | hCoV-19/USA/ID-IBL-832966/2022 | I | 549 | K | 5 | 20220629 |
| EPI_ISL_17516966 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-1995/2023 | I | 549 | T | 7 | 20230320 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | I | 549 | F | 413 | 20240719 |
| EPI_ISL_951095 | NSP3 | hCoV-19/England/OXON-F4A26F/2020 | I | 549 | G | 1 | 20201231 |
| EPI_ISL_18679091 | NSP3 | hCoV-19/USA/AZ-ASU106505/2023 | I | 549 | M | 17 | 20231212 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | I | 549 | stop | 2 | 20221213 |
| EPI_ISL_17794684 | NSP3 | hCoV-19/Jiangxi/JXNC-199/2023 | I | 549 | N | 5 | 20230507 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | I | 549 | S | 6 | 20230220 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | I | 549 | A | 5 | 20230217 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 549 | E | 1 | 20250116 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | I | 549 | Y | 3 | 20230403 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | I | 549 | insKFNPPA | 2 | 20220725 |
| EPI_ISL_19812168 | NSP3 | hCoV-19/Germany/BY-MVP-000026314/2025 | L | 550 | I | 205 | 20250121 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 550 | V | 12 | 20230410 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | L | 550 | N | 38 | 20230406 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | L | 550 | insW | 1 | 20211122 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 550 | E | 1 | 20220210 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | L | 550 | T | 1 | 20211122 |
| EPI_ISL_12666392 | NSP3 | hCoV-19/Australia/NSW-SAVID-11536/2022 | L | 550 | P | 9 | 20220427 |
| EPI_ISL_19192487 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16060/2024 | L | 550 | W | 3 | 20240405 |
| EPI_ISL_16643441 | NSP3 | hCoV-19/USA/UT-UPHL-230118669967/2023 | L | 550 | R | 7 | 20230103 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | L | 550 | M | 1 | 20221213 |
| EPI_ISL_14298911 | NSP3 | hCoV-19/Turkey/HSGM-IST-03668/2022 | L | 550 | H | 2 | 20220702 |
| EPI_ISL_15388070 | NSP3 | hCoV-19/Morocco/FMP411/2021 | L | 550 | C | 1 | 20211227 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 550 | G | 1 | 20221229 |
| EPI_ISL_18420831 | NSP3 | hCoV-19/England/CLIMB-CM7YKHD8/2023 | L | 550 | J | 9 | 20231013 |
| EPI_ISL_18981277 | NSP3 | hCoV-19/USA/TX-HMH-M-139784/2024 | L | 550 | del | 310 | 20240217 |
| EPI_ISL_17162911 | NSP3 | hCoV-19/USA/ID-IBL-876967/2023 | L | 550 | stop | 4 | 20230220 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 550 | A | 1 | 20210318 |
| EPI_ISL_17474974 | NSP3 | hCoV-19/Sweden/03_SE600_000200506930N2/2022 | L | 550 | S | 4 | 20221215 |
| EPI_ISL_18117028 | NSP3 | hCoV-19/South Korea/KDCA256277/2023 | L | 550 | K | 3 | 20230722 |
| EPI_ISL_18823582 | NSP3 | hCoV-19/South Korea/KDCA282794/2023 | L | 550 | F | 305 | 20231229 |
| EPI_ISL_19704250 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00023/2022 | G | 551 | F | 2 | 20220506 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | G | 551 | T | 7 | 20230905 |
| EPI_ISL_17466548 | NSP3 | hCoV-19/Chile/RM-27468/2023 | G | 551 | P | 11 | 20230401 |
| EPI_ISL_19816731 | NSP3 | hCoV-19/Australia/WA16895/2025 | G | 551 | R | 243 | 20250326 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | G | 551 | D | 1 | 20220210 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | G | 551 | Q | 2 | 20220725 |
| EPI_ISL_14962584 | NSP3 | hCoV-19/Slovenia/215141/2022 | G | 551 | V | 10 | 20220730 |
| EPI_ISL_19192553 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15979/2024 | G | 551 | stop | 26 | 20240314 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | G | 551 | K | 14 | 20230217 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | G | 551 | A | 4 | 20221121 |
| EPI_ISL_19212904 | NSP3 | hCoV-19/env/India/MH-NCL-245-20/2024 | G | 551 | insG | 1 | 20240220 |
| EPI_ISL_18910348 | NSP3 | hCoV-19/Ireland/CO-CUH-SC0087/2024 | G | 551 | E | 74 | 20240203 |
| EPI_ISL_8170854 | NSP3 | hCoV-19/Pakistan/DUHS13/2021 | G | 551 | S | 3 | 20211214 |
| EPI_ISL_19192487 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16060/2024 | G | 551 | N | 56 | 20240405 |
| EPI_ISL_18981277 | NSP3 | hCoV-19/USA/TX-HMH-M-139784/2024 | G | 551 | del | 387 | 20240217 |
| EPI_ISL_1730529 | NSP3 | hCoV-19/England/OXON-F7F6A1/2021 | G | 551 | M | 1 | 20210215 |
| EPI_ISL_17474974 | NSP3 | hCoV-19/Sweden/03_SE600_000200506930N2/2022 | G | 551 | W | 3 | 20221215 |
| EPI_ISL_19192482 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16061/2024 | G | 551 | L | 556 | 20240405 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | T | 552 | I | 419 | 20240719 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | T | 552 | insF | 1 | 20210809 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | T | 552 | stop | 1 | 20230403 |
| EPI_ISL_2546802 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-3648/2021 | T | 552 | R | 2 | 20210515 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | T | 552 | Y | 31 | 20230406 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | T | 552 | H | 1 | 20211015 |
| EPI_ISL_17466548 | NSP3 | hCoV-19/Chile/RM-27468/2023 | T | 552 | S | 29 | 20230401 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | T | 552 | L | 13 | 20230217 |
| EPI_ISL_9629922 | NSP3 | hCoV-19/USA/TN-CDC-ASC210541538/2022 | T | 552 | P | 1 | 20220123 |
| EPI_ISL_19192482 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16061/2024 | T | 552 | N | 566 | 20240405 |
| EPI_ISL_18546699 | NSP3 | hCoV-19/USA/TX-HMH-M-135612/2023 | T | 552 | del | 366 | 20231113 |
| EPI_ISL_19192487 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16060/2024 | T | 552 | C | 49 | 20240405 |
| EPI_ISL_17712601 | NSP3 | hCoV-19/USA/UT-UPHL-221223231547/2022 | T | 552 | E | 8 | 20221201 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 552 | D | 5 | 20250116 |
| EPI_ISL_14588255 | NSP3 | hCoV-19/USA/ID-IBL-844143/2022 | T | 552 | K | 3 | 20220808 |
| EPI_ISL_13812273 | NSP3 | hCoV-19/USA/ID-IBL-831538/2022 | T | 552 | V | 4 | 20220624 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | T | 552 | A | 11 | 20230905 |
| EPI_ISL_14881060 | NSP3 | hCoV-19/USA/ID-IBL-846235/2022 | V | 553 | S | 3 | 20220816 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | V | 553 | L | 24 | 20230217 |
| EPI_ISL_17712601 | NSP3 | hCoV-19/USA/UT-UPHL-221223231547/2022 | V | 553 | insRN | 1 | 20221201 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 553 | D | 1 | 20210318 |
| EPI_ISL_13812273 | NSP3 | hCoV-19/USA/ID-IBL-831538/2022 | V | 553 | stop | 2 | 20220624 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | V | 553 | del | 344 | 20230815 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 553 | Y | 4 | 20230217 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | V | 553 | R | 1 | 20220210 |
| EPI_ISL_19192487 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16060/2024 | V | 553 | F | 63 | 20240405 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | V | 553 | E | 3 | 20230403 |
| EPI_ISL_19184092 | NSP3 | hCoV-19/USA/OH-ODH-SC4031892/2024 | V | 553 | I | 79 | 20240508 |
| EPI_ISL_17711378 | NSP3 | hCoV-19/Thailand/NIC_SKA_3096/2023 | V | 553 | G | 6 | 20230502 |
| EPI_ISL_19342908 | NSP3 | hCoV-19/South Africa/NDL-CT-JHB-001/2024 | V | 553 | A | 34 | 20240723 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | V | 553 | insstop | 1 | 20220602 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | V | 553 | insYE | 13 | 20230217 |
| EPI_ISL_18981277 | NSP3 | hCoV-19/USA/TX-HMH-M-139784/2024 | V | 553 | N | 22 | 20240217 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | V | 553 | T | 39 | 20230406 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | V | 553 | C | 936 | 20240719 |
| EPI_ISL_15377059 | NSP3 | hCoV-19/USA/ID-IBL-857506/2022 | S | 554 | M | 1 | 20220921 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | S | 554 | G | 1 | 20210521 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 554 | R | 1 | 20250116 |
| EPI_ISL_18074208 | NSP3 | hCoV-19/Gansu/TSCDC-080209/2023 | S | 554 | Y | 8 | 20230704 |
| EPI_ISL_17463045 | NSP3 | hCoV-19/USA/ID-IBL-878854/2023 | S | 554 | L | 38 | 20230309 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | S | 554 | Q | 1 | 20221229 |
| EPI_ISL_18874749 | NSP3 | hCoV-19/USA/TX-HMH-M-138008/2024 | S | 554 | V | 32 | 20240116 |
| EPI_ISL_17466548 | NSP3 | hCoV-19/Chile/RM-27468/2023 | S | 554 | I | 11 | 20230401 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | S | 554 | N | 18 | 20230217 |
| EPI_ISL_19648297 | NSP3 | hCoV-19/South Africa/PATH-CERI-K064856/2024 | S | 554 | A | 220 | 20241210 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | S | 554 | H | 7 | 20220509 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | S | 554 | K | 2 | 20220723 |
| EPI_ISL_19192487 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16060/2024 | S | 554 | del | 278 | 20240405 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | S | 554 | stop | 2 | 20221201 |
| EPI_ISL_19773063 | NSP3 | hCoV-19/USA/DE-CDC-LC1134240/2025 | S | 554 | F | 613 | 20250224 |
| EPI_ISL_19831372 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56871/2025 | S | 554 | C | 83 | 20250310 |
| EPI_ISL_18531680 | NSP3 | hCoV-19/USA/NY-CDC-LC1065667/2023 | S | 554 | T | 13 | 20231011 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 554 | W | 2 | 20230404 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | S | 554 | E | 389 | 20240719 |
| EPI_ISL_19749357 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00022540_02/2025 | S | 554 | P | 29 | 20250101 |
| EPI_ISL_1730529 | NSP3 | hCoV-19/England/OXON-F7F6A1/2021 | S | 554 | D | 1 | 20210215 |
| EPI_ISL_17711378 | NSP3 | hCoV-19/Thailand/NIC_SKA_3096/2023 | W | 555 | N | 17 | 20230502 |
| EPI_ISL_16916821 | NSP3 | hCoV-19/USA/CA-CDC-LC1004575/2023 | W | 555 | M | 1 | 20230202 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | W | 555 | K | 390 | 20240719 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | W | 555 | G | 7 | 20230217 |
| EPI_ISL_12166976 | NSP3 | hCoV-19/USA/ID-IBL-813032/2022 | W | 555 | insHCFL | 1 | 20220407 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | W | 555 | A | 4 | 20250116 |
| EPI_ISL_18115487 | NSP3 | hCoV-19/Thailand/NIC_BKK_6916/2023 | W | 555 | stop | 43 | 20230628 |
| EPI_ISL_17466548 | NSP3 | hCoV-19/Chile/RM-27468/2023 | W | 555 | S | 11 | 20230401 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | W | 555 | T | 2 | 20230217 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | W | 555 | I | 1 | 20220823 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | W | 555 | E | 32 | 20230406 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | W | 555 | del | 294 | 20230905 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | W | 555 | C | 8 | 20230925 |
| EPI_ISL_12694393 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471037/2022 | W | 555 | insNCFL | 4 | 20220126 |
| EPI_ISL_17273421 | NSP3 | hCoV-19/USA/ID-IBL-878303/2023 | W | 555 | F | 24 | 20230307 |
| EPI_ISL_16414721 | NSP3 | hCoV-19/Turkey/KSS-BDSKEAH4935597453/2022 | W | 555 | Y | 11 | 20221226 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | W | 555 | V | 1 | 20220210 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | W | 555 | P | 7 | 20220509 |
| EPI_ISL_19192487 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16060/2024 | W | 555 | L | 605 | 20240405 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | W | 555 | D | 1 | 20220210 |
| EPI_ISL_19696814 | NSP3 | hCoV-19/Turkey/HSGM-AA000453/2024 | W | 555 | R | 7 | 20240208 |
| EPI_ISL_19374882 | NSP3 | hCoV-19/Spain/CT-HUJ23-75997/2024 | N | 556 | H | 524 | 20240702 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | N | 556 | I | 16 | 20230401 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | N | 556 | del | 254 | 20230905 |
| EPI_ISL_8803758 | NSP3 | hCoV-19/India/GA-NCCS-3055200157592/2021 | N | 556 | insCFLEF | 1 | 20210803 |
| EPI_ISL_17989353 | NSP3 | hCoV-19/Nepal/NPHL-S-2459/2023 | N | 556 | stop | 11 | 20230407 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | N | 556 | A | 1 | 20250116 |
| EPI_ISL_12658799 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121021-1272/2021 | N | 556 | insCFLE | 2 | 20211210 |
| EPI_ISL_5484223 | NSP3 | hCoV-19/England/PHEC-3M0A4M07/2021 | N | 556 | F | 9 | 20211016 |
| EPI_ISL_10082044 | NSP3 | hCoV-19/USA/TN-ASC-210507606/2022 | N | 556 | G | 5 | 20220104 |
| EPI_ISL_19163214 | NSP3 | hCoV-19/Canada/AB-ABPHL-117580/2024 | N | 556 | T | 123 | 20240511 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | N | 556 | insC | 63 | 20230131 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | N | 556 | L | 3 | 20230104 |
| EPI_ISL_19351714 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1963/2024 | N | 556 | insCFLN | 1263 | 20240708 |
| EPI_ISL_19757661 | NSP3 | hCoV-19/Estonia/TLCD-34533/2024 | N | 556 | D | 34 | 20240805 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | N | 556 | R | 6 | 20220901 |
| EPI_ISL_17526108 | NSP3 | hCoV-19/Chile/VS-30743/2023 | N | 556 | E | 52 | 20230410 |
| EPI_ISL_19641414 | NSP3 | hCoV-19/USA/UT-UPHL-241230186752/2024 | N | 556 | S | 722 | 20241211 |
| EPI_ISL_17713283 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000186405SP/2022 | N | 556 | insCFXN | 1 | 20220922 |
| EPI_ISL_18901869 | NSP3 | hCoV-19/Spain/GA-CHUAC-12035/2024 | N | 556 | K | 89 | 20240207 |
| EPI_ISL_16807821 | NSP3 | hCoV-19/Singapore/R8MR55/2023 | N | 556 | B | 4 | 20230127 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | N | 556 | Y | 4 | 20230217 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | N | 556 | C | 386 | 20240719 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | N | 556 | P | 1 | 20220823 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | L | 557 | H | 1 | 20220901 |
| EPI_ISL_17591891 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3244/2023 | L | 557 | I | 26 | 20230418 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 557 | M | 21 | 20250116 |
| EPI_ISL_17711378 | NSP3 | hCoV-19/Thailand/NIC_SKA_3096/2023 | L | 557 | T | 4 | 20230502 |
| EPI_ISL_18160484 | NSP3 | hCoV-19/USA/NY-CDC-QDX83857809/2023 | L | 557 | S | 20 | 20230810 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | L | 557 | del | 255 | 20230905 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | L | 557 | A | 42 | 20230605 |
| EPI_ISL_1730529 | NSP3 | hCoV-19/England/OXON-F7F6A1/2021 | L | 557 | insTPVKQLstop | 1 | 20210215 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | L | 557 | insGstop | 1 | 20210918 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | L | 557 | R | 1 | 20210812 |
| EPI_ISL_8065816 | NSP3 | hCoV-19/Ghana/NMIMR-NCOV-21-56940/2021 | L | 557 | insFLNX | 1 | 20210920 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | L | 557 | C | 20 | 20230401 |
| EPI_ISL_18623825 | NSP3 | hCoV-19/Japan/PG-584367/2023 | L | 557 | W | 31 | 20231125 |
| EPI_ISL_19721527 | NSP3 | hCoV-19/USA/WI-WSLH-2403348/2024 | L | 557 | F | 928 | 20241217 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 557 | E | 3 | 20220210 |
| EPI_ISL_18951451 | NSP3 | hCoV-19/USA/MS-MSPHL-0168/2024 | L | 557 | stop | 1 | 20240216 |
| EPI_ISL_18938613 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC45227/2024 | L | 557 | V | 179 | 20240218 |
| EPI_ISL_17526108 | NSP3 | hCoV-19/Chile/VS-30743/2023 | L | 557 | K | 17 | 20230410 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | L | 557 | Q | 13 | 20230217 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | L | 557 | N | 2 | 20230404 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | R | 558 | E | 23 | 20230403 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | R | 558 | T | 3 | 20230217 |
| EPI_ISL_19553161 | NSP3 | hCoV-19/Canada/QC-L00802846001/2024 | R | 558 | Q | 509 | 20241021 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | R | 558 | K | 32 | 20230406 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | R | 558 | del | 257 | 20230905 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | R | 558 | N | 2 | 20230404 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | R | 558 | S | 3 | 20250116 |
| EPI_ISL_3760019 | NSP3 | hCoV-19/USA/ID-IBL-747273/2021 | R | 558 | insG | 1 | 20210808 |
| EPI_ISL_19541414 | NSP3 | hCoV-19/Italy/LAZ-UCBM-2024-55/2024 | R | 558 | L | 433 | 20241007 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | R | 558 | insIstop | 1 | 20230330 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 558 | Y | 2 | 20220210 |
| EPI_ISL_19212872 | NSP3 | hCoV-19/env/India/MH-NCL-264-20/2024 | R | 558 | insV | 1 | 20240320 |
| EPI_ISL_17591891 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3244/2023 | R | 558 | C | 13 | 20230418 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | R | 558 | W | 1 | 20210805 |
| EPI_ISL_17711378 | NSP3 | hCoV-19/Thailand/NIC_SKA_3096/2023 | R | 558 | P | 1 | 20230502 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | R | 558 | F | 3 | 20230217 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | R | 558 | A | 10 | 20220602 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | R | 558 | insQI | 1 | 20210316 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | R | 558 | M | 1 | 20210802 |
| EPI_ISL_19001573 | NSP3 | hCoV-19/South Korea/KDCA288123/2024 | R | 558 | stop | 33 | 20240225 |
| EPI_ISL_19308305 | NSP3 | hCoV-19/USA/CA-CDPH-500138433/2024 | R | 558 | G | 19 | 20240528 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | R | 558 | V | 1 | 20220110 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | R | 558 | H | 397 | 20240719 |
| EPI_ISL_15581076 | NSP3 | hCoV-19/France/IDF-AphpSA-LM000892/2022 | E | 559 | H | 3 | 20220916 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 559 | I | 2 | 20220210 |
| EPI_ISL_16855604 | NSP3 | hCoV-19/England/BRBR-326B7379/2023 | E | 559 | Z | 5 | 20230131 |
| EPI_ISL_18914991 | NSP3 | hCoV-19/env/Ukraine/81348/2023 | E | 559 | G | 15 | 20231030 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | E | 559 | C | 2 | 20230404 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | E | 559 | M | 385 | 20240719 |
| EPI_ISL_18098346 | NSP3 | hCoV-19/Kenya/KNPHLGEN092/2021 | E | 559 | insK | 1 | 20211214 |
| EPI_ISL_19213064 | NSP3 | hCoV-19/env/India/MH-NCL-260-13/2024 | E | 559 | K | 59 | 20240313 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | E | 559 | del | 230 | 20240320 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | E | 559 | N | 22 | 20230217 |
| EPI_ISL_16408395 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1124/2022 | E | 559 | R | 6 | 20221107 |
| EPI_ISL_18355340 | NSP3 | hCoV-19/South Korea/KDCA266085/2023 | E | 559 | Q | 8 | 20230919 |
| EPI_ISL_13720936 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-113/2022 | E | 559 | stop | 28 | 20220618 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | E | 559 | L | 6 | 20230403 |
| EPI_ISL_13620902 | NSP3 | hCoV-19/Turkey/HSGM-IST-02318/2022 | E | 559 | V | 5 | 20220622 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 559 | Y | 1 | 20250116 |
| EPI_ISL_13724474 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-115/2022 | E | 559 | F | 2 | 20220616 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | E | 559 | T | 36 | 20230406 |
| EPI_ISL_19320177 | NSP3 | hCoV-19/Switzerland/GE-HUG-45192484/2024 | E | 559 | D | 389 | 20240628 |
| EPI_ISL_19192538 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16003/2024 | E | 559 | A | 16 | 20240326 |
| EPI_ISL_17711378 | NSP3 | hCoV-19/Thailand/NIC_SKA_3096/2023 | E | 559 | S | 6 | 20230502 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | M | 560 | G | 4 | 20230410 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | M | 560 | Q | 386 | 20240719 |
| EPI_ISL_9697686 | NSP3 | hCoV-19/India/MH-RFIP08762/2022 | M | 560 | insLAHAEETRKPKTCP | 2 | 20220119 |
| EPI_ISL_13346233 | NSP3 | hCoV-19/USA/ID-IBL-824951/2022 | M | 560 | N | 9 | 20220602 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | M | 560 | Y | 2 | 20231121 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | M | 560 | S | 3 | 20230217 |
| EPI_ISL_19213064 | NSP3 | hCoV-19/env/India/MH-NCL-260-13/2024 | M | 560 | C | 29 | 20240313 |
| EPI_ISL_19791157 | NSP3 | hCoV-19/Brazil/MS-FIOCRUZ-FMS777/2025 | M | 560 | I | 5793 | 20250224 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | M | 560 | insELKFNPPALQDAYY | 1 | 20221121 |
| EPI_ISL_18936140 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00059/2023 | M | 560 | F | 80 | 20230412 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | M | 560 | del | 229 | 20240320 |
| EPI_ISL_18870180 | NSP3 | hCoV-19/India/MP-DRDE-01/2023 | M | 560 | K | 17 | 20230422 |
| EPI_ISL_15693017 | NSP3 | hCoV-19/USA/ID-IBL-861143/2022 | M | 560 | A | 16 | 20221019 |
| EPI_ISL_14718232 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19515/2022 | M | 560 | R | 4 | 20220805 |
| EPI_ISL_18049989 | NSP3 | hCoV-19/Germany/BW-RKI-I-1136909/2023 | M | 560 | V | 135 | 20230619 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | M | 560 | L | 210 | 20250116 |
| EPI_ISL_10944011 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9033/2022 | M | 560 | E | 2 | 20220209 |
| EPI_ISL_9356233 | NSP3 | hCoV-19/USA/NC-UNC-R220180/2022 | M | 560 | W | 1 | 20220104 |
| EPI_ISL_13812273 | NSP3 | hCoV-19/USA/ID-IBL-831538/2022 | M | 560 | insQ | 1 | 20220624 |
| EPI_ISL_18561064 | NSP3 | hCoV-19/Israel/SMC-7115889/2023 | M | 560 | T | 21 | 20231102 |
| EPI_ISL_18668868 | NSP3 | hCoV-19/Lithuania/MB231031_0140/2023 | L | 561 | J | 7 | 20231024 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | L | 561 | N | 1 | 20220210 |
| EPI_ISL_18743526 | NSP3 | hCoV-19/USA/TX-HMH-M-136400/2023 | L | 561 | H | 6 | 20231215 |
| EPI_ISL_18870180 | NSP3 | hCoV-19/India/MP-DRDE-01/2023 | L | 561 | C | 25 | 20230422 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | L | 561 | R | 4 | 20221121 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | L | 561 | A | 80 | 20230213 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | L | 561 | K | 387 | 20240719 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 561 | E | 3 | 20230104 |
| EPI_ISL_19451403 | NSP3 | hCoV-19/Netherlands/GR-RIVM-141910/2024 | L | 561 | I | 192 | 20240823 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | L | 561 | insHMQK | 5 | 20230401 |
| EPI_ISL_19704250 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00023/2022 | L | 561 | M | 3 | 20220506 |
| EPI_ISL_13724474 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-115/2022 | L | 561 | T | 3 | 20220616 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | L | 561 | del | 236 | 20240320 |
| EPI_ISL_6132032 | NSP3 | hCoV-19/Malaysia/3147489/2021 | L | 561 | G | 1 | 20210629 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 561 | V | 15 | 20230410 |
| EPI_ISL_18823337 | NSP3 | hCoV-19/South Korea/KDCA282533/2023 | L | 561 | P | 3 | 20231226 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 561 | S | 5 | 20230217 |
| EPI_ISL_10943965 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8879/2022 | L | 561 | W | 1 | 20220208 |
| EPI_ISL_17711378 | NSP3 | hCoV-19/Thailand/NIC_SKA_3096/2023 | L | 561 | Q | 1 | 20230502 |
| EPI_ISL_13563933 | NSP3 | hCoV-19/USA/ID-IBL-825612/2022 | L | 561 | stop | 1 | 20220606 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 561 | F | 275 | 20250116 |
| EPI_ISL_19309101 | NSP3 | hCoV-19/Japan/FR012-0390/2024 | A | 562 | K | 425 | 20240719 |
| EPI_ISL_10638972 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3228/2022 | A | 562 | G | 13 | 20220208 |
| EPI_ISL_13736039 | NSP3 | hCoV-19/Chile/AP-77413/2022 | A | 562 | H | 5 | 20220619 |
| EPI_ISL_19805722 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U801-1/2025 | A | 562 | T | 1558 | 20250312 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 562 | Q | 3 | 20250116 |
| EPI_ISL_13829418 | NSP3 | hCoV-19/USA/ID-IBL-833880/2022 | A | 562 | C | 9 | 20220701 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | A | 562 | insstopQL | 1 | 20210525 |
| EPI_ISL_1475702 | NSP3 | hCoV-19/Scotland/OXON-F7CE33/2021 | A | 562 | insQK | 1 | 20210315 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | A | 562 | del | 323 | 20240320 |
| EPI_ISL_19627477 | NSP3 | hCoV-19/Slovenia/1002127/2024 | A | 562 | S | 69 | 20240918 |
| EPI_ISL_18485334 | NSP3 | hCoV-19/Hubei/HCDC-WH3504/2023 | A | 562 | E | 91 | 20231031 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | A | 562 | D | 2 | 20220928 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | A | 562 | F | 3 | 20231121 |
| EPI_ISL_18870180 | NSP3 | hCoV-19/India/MP-DRDE-01/2023 | A | 562 | L | 33 | 20230422 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | A | 562 | N | 2 | 20230104 |
| EPI_ISL_19443567 | NSP3 | hCoV-19/South Korea/KDCA295666/2024 | A | 562 | P | 5 | 20240903 |
| EPI_ISL_1960923 | NSP3 | hCoV-19/USA/LA-EVTL2554/2021 | A | 562 | I | 1 | 20210406 |
| EPI_ISL_19733048 | NSP3 | hCoV-19/USA/NE-NPHL-RP251120/2025 | A | 562 | V | 1428 | 20250124 |
| EPI_ISL_17089377 | NSP3 | hCoV-19/USA/ID-IBL-876209/2023 | A | 562 | stop | 9 | 20230213 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | A | 562 | R | 70 | 20230131 |
| EPI_ISL_11793532 | NSP3 | hCoV-19/India/KA-SEQ_14388_S249_R1_001/2022 | A | 562 | insLSLI | 1 | 20220201 |
| EPI_ISL_18335118 | NSP3 | hCoV-19/Chile/RM-70475/2023 | H | 563 | I | 6 | 20230905 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | H | 563 | V | 1 | 20211015 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | H | 563 | P | 10 | 20220901 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | H | 563 | S | 4 | 20231121 |
| EPI_ISL_18936223 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00076/2023 | H | 563 | G | 2 | 20230413 |
| EPI_ISL_19804721 | NSP3 | hCoV-19/USA/NY-NYULH-22407/2025 | H | 563 | Y | 1329 | 20250317 |
| EPI_ISL_13829382 | NSP3 | hCoV-19/USA/ID-IBL-832972/2022 | H | 563 | D | 9 | 20220629 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | H | 563 | N | 88 | 20230131 |
| EPI_ISL_3421684 | NSP3 | hCoV-19/Wales/OXON-FA6FC4/2020 | H | 563 | insNstop | 1 | 20201126 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | H | 563 | F | 6 | 20230403 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | H | 563 | M | 7 | 20220928 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | H | 563 | A | 14 | 20230217 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | H | 563 | T | 10 | 20230404 |
| EPI_ISL_15377059 | NSP3 | hCoV-19/USA/ID-IBL-857506/2022 | H | 563 | insstop | 1 | 20220921 |
| EPI_ISL_18286018 | NSP3 | hCoV-19/Italy/LOM-UniMI133/2023 | H | 563 | E | 3 | 20230710 |
| EPI_ISL_16408395 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1124/2022 | H | 563 | L | 7 | 20221107 |
| EPI_ISL_19742309 | NSP3 | hCoV-19/South Korea/KDCA296951/2025 | H | 563 | R | 8 | 20250121 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | H | 563 | insPLLSAGIFG | 12 | 20230217 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | H | 563 | del | 344 | 20240320 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | H | 563 | K | 38 | 20230406 |
| EPI_ISL_13829418 | NSP3 | hCoV-19/USA/ID-IBL-833880/2022 | H | 563 | stop | 5 | 20220701 |
| EPI_ISL_17821650 | NSP3 | hCoV-19/Brazil/RS-LMM74517/2023 | H | 563 | Q | 14 | 20230102 |
| EPI_ISL_18164251 | NSP3 | hCoV-19/USA/TX-HMH-M-132126/2023 | H | 563 | C | 18 | 20230821 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 564 | insNL | 1 | 20250116 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | A | 564 | I | 10 | 20230104 |
| EPI_ISL_18164251 | NSP3 | hCoV-19/USA/TX-HMH-M-132126/2023 | A | 564 | R | 19 | 20230821 |
| EPI_ISL_18870180 | NSP3 | hCoV-19/India/MP-DRDE-01/2023 | A | 564 | M | 14 | 20230422 |
| EPI_ISL_15973026 | NSP3 | hCoV-19/Spain/MD-HULP-20060920/2022 | A | 564 | D | 1 | 20221116 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | A | 564 | Q | 6 | 20220928 |
| EPI_ISL_17821673 | NSP3 | hCoV-19/Brazil/RS-LMM74407/2023 | A | 564 | L | 15 | 20230415 |
| EPI_ISL_18936223 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00076/2023 | A | 564 | Y | 1 | 20230413 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | A | 564 | F | 3 | 20230109 |
| EPI_ISL_18690486 | NSP3 | hCoV-19/USA/TX-HMH-M-135939/2023 | A | 564 | T | 148 | 20231203 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | A | 564 | del | 332 | 20240320 |
| EPI_ISL_12298511 | NSP3 | hCoV-19/India/KA-SEQ_14532_S15_R1_001/2022 | A | 564 | N | 2 | 20220203 |
| EPI_ISL_17821650 | NSP3 | hCoV-19/Brazil/RS-LMM74517/2023 | A | 564 | E | 279 | 20230102 |
| EPI_ISL_19513209 | NSP3 | hCoV-19/Sweden/T-60102508/2024 | A | 564 | S | 190 | 20241011 |
| EPI_ISL_16843173 | NSP3 | hCoV-19/Japan/TKYmbc30675/2022 | A | 564 | insE | 1 | 20221229 |
| EPI_ISL_19804788 | NSP3 | hCoV-19/USA/NY-NYULH-22488/2025 | A | 564 | V | 1865 | 20250325 |
| EPI_ISL_1960999 | NSP3 | hCoV-19/USA/LA-EVTL2520/2021 | A | 564 | stop | 1 | 20210413 |
| EPI_ISL_15756981 | NSP3 | hCoV-19/Fujian/2021BD-VIR-SPE-0586/2021 | A | 564 | insCNX | 1 | 20210813 |
| EPI_ISL_8812967 | NSP3 | hCoV-19/USA/OR-TRACE-POLK-042521-1190/2021 | A | 564 | insCTS | 1 | 20210425 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | A | 564 | C | 44 | 20230406 |
| EPI_ISL_19082357 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140575/2024 | A | 564 | P | 15 | 20240320 |
| EPI_ISL_19762894 | NSP3 | hCoV-19/Egypt/CPHL-EGY24442/2024 | A | 564 | G | 39 | 20241219 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | A | 564 | K | 12 | 20220210 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | E | 565 | G | 14 | 20221121 |
| EPI_ISL_18311029 | NSP3 | hCoV-19/USA/WA-GBW-H10-017-0089/2023 | E | 565 | Q | 36 | 20230917 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | E | 565 | C | 70 | 20230131 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | E | 565 | I | 1 | 20230104 |
| EPI_ISL_11906889 | NSP3 | hCoV-19/Pakistan/PACP-PB-PPHRL-21/2022 | E | 565 | insLYHYRL | 1 | 20220206 |
| EPI_ISL_10523414 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-349154/2022 | E | 565 | W | 1 | 20220217 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | E | 565 | insXXXXXXXXXXXXXXXXXXXXX | 1 | 20230404 |
| EPI_ISL_10969499 | NSP3 | hCoV-19/Lebanon/NIC206/2022 | E | 565 | insK | 1 | 20220105 |
| EPI_ISL_18936140 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00059/2023 | E | 565 | H | 3 | 20230412 |
| EPI_ISL_4530175 | NSP3 | hCoV-19/England/PHEC-3G072G79/2021 | E | 565 | insCL | 1 | 20210919 |
| EPI_ISL_19308770 | NSP3 | hCoV-19/Russia/SPE-RII-MH194834S/2024 | E | 565 | A | 126 | 20240723 |
| EPI_ISL_12320462 | NSP3 | hCoV-19/Turkey/HSGM-GS1964/2022 | E | 565 | V | 12 | 20220401 |
| EPI_ISL_3922925 | NSP3 | hCoV-19/USA/ID-IBL-749565/2021 | E | 565 | insstopCP | 1 | 20210813 |
| EPI_ISL_19131295 | NSP3 | hCoV-19/env/Ukraine/83405/2023 | E | 565 | R | 39 | 20231214 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | E | 565 | del | 330 | 20240320 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | E | 565 | N | 35 | 20230401 |
| EPI_ISL_19143509 | NSP3 | hCoV-19/Pakistan/GRH42662/2024 | E | 565 | stop | 25 | 20240320 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | E | 565 | M | 1 | 20211011 |
| EPI_ISL_17821650 | NSP3 | hCoV-19/Brazil/RS-LMM74517/2023 | E | 565 | T | 6 | 20230102 |
| EPI_ISL_15117781 | NSP3 | hCoV-19/Chile/AT-109850/2022 | E | 565 | insXXXXXXXXXXXXXXXXXXXX | 1 | 20220904 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | E | 565 | P | 1 | 20210316 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | E | 565 | L | 11 | 20230404 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | E | 565 | S | 11 | 20231121 |
| EPI_ISL_17786792 | NSP3 | hCoV-19/England/PHEC-YYE4JO3/2023 | E | 565 | Z | 32 | 20230523 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 565 | D | 133 | 20250116 |
| EPI_ISL_17821931 | NSP3 | hCoV-19/Brazil/RS-LMM74108/2023 | E | 565 | Y | 3 | 20230115 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | E | 565 | insstopCL | 25 | 20230401 |
| EPI_ISL_19802525 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10999/2025 | E | 565 | K | 264 | 20250228 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | E | 566 | Y | 14 | 20230605 |
| EPI_ISL_19444982 | NSP3 | hCoV-19/USA/NY-NYULH-21011/2024 | E | 566 | K | 146 | 20240919 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | E | 566 | T | 73 | 20230131 |
| EPI_ISL_19502844 | NSP3 | hCoV-19/Russia/SPE-RII-MH197519S/2024 | E | 566 | G | 75 | 20240827 |
| EPI_ISL_4470133 | NSP3 | hCoV-19/India/DL-NCDC-330953/2021 | E | 566 | insTR | 1 | 20210506 |
| EPI_ISL_17833139 | NSP3 | hCoV-19/Germany/ST-RKI-I-1136591/2023 | E | 566 | A | 40 | 20230525 |
| EPI_ISL_19562567 | NSP3 | hCoV-19/env/Germany/BY-LGL-6405422/2024 | E | 566 | stop | 16 | 20241104 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | E | 566 | R | 13 | 20220901 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | E | 566 | del | 370 | 20240320 |
| EPI_ISL_14308129 | NSP3 | hCoV-19/Chile/VS-93276/2022 | E | 566 | insXXX | 1 | 20220730 |
| EPI_ISL_18210848 | NSP3 | hCoV-19/USA/NC-1085-9880/2023 | E | 566 | V | 8 | 20230824 |
| EPI_ISL_18936207 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00052/2023 | E | 566 | H | 2 | 20230412 |
| EPI_ISL_16408395 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1124/2022 | E | 566 | C | 3 | 20221107 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | E | 566 | P | 16 | 20230217 |
| EPI_ISL_19131295 | NSP3 | hCoV-19/env/Ukraine/83405/2023 | E | 566 | N | 44 | 20231214 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 566 | S | 64 | 20250116 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | E | 566 | F | 4 | 20220725 |
| EPI_ISL_16113909 | NSP3 | hCoV-19/USA/TX-HMH-M-119690/2022 | E | 566 | I | 15 | 20221207 |
| EPI_ISL_19077412 | NSP3 | hCoV-19/USA/WI-WSLH-2400999/2024 | E | 566 | D | 47 | 20240304 |
| EPI_ISL_18313471 | NSP3 | hCoV-19/Japan/PG-567537/2023 | E | 566 | Q | 23 | 20230828 |
| EPI_ISL_17292131 | NSP3 | hCoV-19/England/BRBR-3270AE0C/2023 | E | 566 | Z | 12 | 20230318 |
| EPI_ISL_13829377 | NSP3 | hCoV-19/USA/ID-IBL-832966/2022 | E | 566 | M | 1 | 20220629 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | E | 566 | L | 6 | 20230404 |
| EPI_ISL_7493997 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081621-987/2021 | E | 566 | insK | 2 | 20210816 |
| EPI_ISL_18743287 | NSP3 | hCoV-19/USA/TX-HMH-M-137122/2024 | T | 567 | N | 40 | 20240101 |
| EPI_ISL_18870725 | NSP3 | hCoV-19/env/Ukraine/84219/2024 | T | 567 | K | 55 | 20240111 |
| EPI_ISL_13631159 | NSP3 | hCoV-19/Latvia/7241432/2022 | T | 567 | insTIstop | 1 | 20220530 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | T | 567 | H | 8 | 20230217 |
| EPI_ISL_17821635 | NSP3 | hCoV-19/Brazil/RS-LMM74545/2023 | T | 567 | S | 22 | 20230429 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | T | 567 | insFL | 7 | 20220509 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | T | 567 | V | 41 | 20230401 |
| EPI_ISL_19281045 | NSP3 | hCoV-19/Australia/TAS007876/2024 | T | 567 | I | 24 | 20240628 |
| EPI_ISL_19664524 | NSP3 | hCoV-19/USA/CT-DPH-1268098001/2024 | T | 567 | A | 103 | 20241218 |
| EPI_ISL_18936207 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00052/2023 | T | 567 | stop | 7 | 20230412 |
| EPI_ISL_16761475 | NSP3 | hCoV-19/Chile/CO-5917/2023 | T | 567 | Q | 8 | 20230124 |
| EPI_ISL_13718835 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2771/2022 | T | 567 | G | 1 | 20220618 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | T | 567 | del | 363 | 20240320 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | T | 567 | Y | 2 | 20210316 |
| EPI_ISL_16843173 | NSP3 | hCoV-19/Japan/TKYmbc30675/2022 | T | 567 | R | 6 | 20221229 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 567 | C | 76 | 20250116 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | T | 567 | L | 12 | 20231121 |
| EPI_ISL_17201486 | NSP3 | hCoV-19/Chile/RM-17241/2023 | T | 567 | E | 2 | 20230228 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | T | 567 | D | 3 | 20220901 |
| EPI_ISL_18355340 | NSP3 | hCoV-19/South Korea/KDCA266085/2023 | T | 567 | P | 4 | 20230919 |
| EPI_ISL_13736063 | NSP3 | hCoV-19/Chile/RM-77428/2022 | T | 567 | W | 2 | 20220619 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | T | 567 | M | 6 | 20230605 |
| EPI_ISL_19020204 | NSP3 | hCoV-19/USA/NY-NYCPHL-017439/2023 | R | 568 | L | 337 | 20230818 |
| EPI_ISL_11068344 | NSP3 | hCoV-19/India/DL-NCDC-6809333/2021 | R | 568 | insTKNLSISTCRRNT | 42 | 20211210 |
| EPI_ISL_19131295 | NSP3 | hCoV-19/env/Ukraine/83405/2023 | R | 568 | Q | 53 | 20231214 |
| EPI_ISL_15457686 | NSP3 | hCoV-19/Sweden/03_SE600_000200327024N2/2022 | R | 568 | insXX | 1 | 20220120 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | R | 568 | W | 34 | 20230401 |
| EPI_ISL_11065880 | NSP3 | hCoV-19/India/LA-NCDC-6609373/2021 | R | 568 | insTKNLSISTCRRNTH | 16 | 20211201 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | R | 568 | A | 13 | 20221121 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | R | 568 | insANstopCLSVW | 1 | 20210813 |
| EPI_ISL_18161701 | NSP3 | hCoV-19/Wales/CLIMB-CM7YERBZ/2023 | R | 568 | S | 59 | 20230810 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | R | 568 | K | 65 | 20250116 |
| EPI_ISL_18331283 | NSP3 | hCoV-19/Sweden/T-22327035/2023 | R | 568 | P | 7 | 20230919 |
| EPI_ISL_11179264 | NSP3 | hCoV-19/Thailand/DMSc-08686/2022 | R | 568 | insI | 3 | 20220220 |
| EPI_ISL_18743287 | NSP3 | hCoV-19/USA/TX-HMH-M-137122/2024 | R | 568 | T | 43 | 20240101 |
| EPI_ISL_19805509 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U470-1/2025 | R | 568 | C | 1377 | 20250224 |
| EPI_ISL_9713901 | NSP3 | hCoV-19/India/MH-RFIP08366/2022 | R | 568 | insKP | 1 | 20220107 |
| EPI_ISL_11795909 | NSP3 | hCoV-19/India/KA_14067_S189_R1_001/2022 | R | 568 | V | 6 | 20220220 |
| EPI_ISL_16761475 | NSP3 | hCoV-19/Chile/CO-5917/2023 | R | 568 | E | 4 | 20230124 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | R | 568 | del | 363 | 20240320 |
| EPI_ISL_11069588 | NSP3 | hCoV-19/India/BR-NCDC-6709314/2021 | R | 568 | insTKNLSISTCRRNTHQKLVHstop | 2 | 20211203 |
| EPI_ISL_13307906 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2157/2022 | R | 568 | I | 3 | 20220528 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | R | 568 | D | 1 | 20231121 |
| EPI_ISL_19819905 | NSP3 | hCoV-19/Canada/ON-HRL-20251019325352-v1/2025 | R | 568 | N | 245 | 20250312 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | R | 568 | F | 29 | 20230406 |
| EPI_ISL_17708971 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200395963N2/2022 | R | 568 | insXXX | 1 | 20220428 |
| EPI_ISL_18612639 | NSP3 | hCoV-19/Netherlands/GE-RIVM-133980/2023 | R | 568 | G | 46 | 20231118 |
| EPI_ISL_18321855 | NSP3 | hCoV-19/USA/TX-HMH-M-133940/2023 | R | 568 | insRNT | 1 | 20230913 |
| EPI_ISL_19794957 | NSP3 | hCoV-19/Canada/QC-L00853332001/2025 | R | 568 | H | 1182 | 20250310 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | R | 568 | M | 5 | 20231020 |
| EPI_ISL_18743287 | NSP3 | hCoV-19/USA/TX-HMH-M-137122/2024 | K | 569 | Q | 645 | 20240101 |
| EPI_ISL_11109927 | NSP3 | hCoV-19/India/CH-NCDC-64098/2021 | K | 569 | insKNL | 3 | 20211107 |
| EPI_ISL_11053675 | NSP3 | hCoV-19/India/HP-NCDC-6209197/2021 | K | 569 | insKNLSISTCRRNTX | 3 | 20211029 |
| EPI_ISL_13829382 | NSP3 | hCoV-19/USA/ID-IBL-832972/2022 | K | 569 | V | 3 | 20220629 |
| EPI_ISL_13079013 | NSP3 | hCoV-19/India/MH-INSACOG-IP12225/2022 | K | 569 | insPK | 5 | 20220513 |
| EPI_ISL_17821692 | NSP3 | hCoV-19/Brazil/RS-LMM74181/2023 | K | 569 | I | 51 | 20230320 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | K | 569 | S | 19 | 20230605 |
| EPI_ISL_17624832 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200345952N2/2022 | K | 569 | insXXXXX | 1 | 20220203 |
| EPI_ISL_17349896 | NSP3 | hCoV-19/Chile/AT-23757/2023 | K | 569 | E | 31 | 20230316 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | K | 569 | insFCAL | 1 | 20221121 |
| EPI_ISL_8170854 | NSP3 | hCoV-19/Pakistan/DUHS13/2021 | K | 569 | stop | 2 | 20211214 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | K | 569 | T | 59 | 20230403 |
| EPI_ISL_17238811 | NSP3 | hCoV-19/Italy/CAM-90390374702_IZSM_COLLI_TIGEM/2023 | K | 569 | J | 1 | 20230218 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | K | 569 | Y | 30 | 20231020 |
| EPI_ISL_18594586 | NSP3 | hCoV-19/Saint Lucia/183693/2023 | K | 569 | G | 3 | 20230712 |
| EPI_ISL_18987861 | NSP3 | hCoV-19/env/Germany/BY-LGL-6150955/2024 | K | 569 | insNTQ | 19 | 20240214 |
| EPI_ISL_17238809 | NSP3 | hCoV-19/Italy/CAM-90390374099_IZSM_COLLI_TIGEM/2023 | K | 569 | L | 12 | 20230221 |
| EPI_ISL_16464501 | NSP3 | hCoV-19/Brazil/SP-IB_CEVC_2204388/2022 | K | 569 | H | 5 | 20221130 |
| EPI_ISL_11064011 | NSP3 | hCoV-19/India/DL-NCDC-7809192/2022 | K | 569 | insQ | 24 | 20220111 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 569 | M | 7 | 20230108 |
| EPI_ISL_4441471 | NSP3 | hCoV-19/India/JK-NCDC-3309283/2021 | K | 569 | insKNLSISTCRRNTHX | 1 | 20210519 |
| EPI_ISL_4102452 | NSP3 | hCoV-19/Nigeria/NCDC-NR320/2021 | K | 569 | insIGRA | 1 | 20210821 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 569 | R | 131 | 20250116 |
| EPI_ISL_4470217 | NSP3 | hCoV-19/India/JK-NCDC-3309265/2021 | K | 569 | insKNLSISTCRRNTHQX | 1 | 20210519 |
| EPI_ISL_17200878 | NSP3 | hCoV-19/England/PLYM-326F8725/2023 | K | 569 | A | 4 | 20230306 |
| EPI_ISL_17821650 | NSP3 | hCoV-19/Brazil/RS-LMM74517/2023 | K | 569 | N | 107 | 20230102 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | K | 569 | del | 403 | 20240320 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | K | 569 | insSI | 1 | 20210918 |
| EPI_ISL_11795909 | NSP3 | hCoV-19/India/KA_14067_S189_R1_001/2022 | K | 569 | P | 17 | 20220220 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | K | 569 | F | 3 | 20230429 |
| EPI_ISL_8882782 | NSP3 | hCoV-19/India/MH-NCCS-2750000363655/2021 | K | 569 | insNTH | 1 | 20210708 |
| EPI_ISL_13079022 | NSP3 | hCoV-19/India/MH-INSACOG-IP12270/2022 | K | 569 | insPKTCPLAHAEETRK | 58 | 20220516 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | L | 570 | C | 7 | 20240227 |
| EPI_ISL_17349896 | NSP3 | hCoV-19/Chile/AT-23757/2023 | L | 570 | M | 11 | 20230316 |
| EPI_ISL_17821650 | NSP3 | hCoV-19/Brazil/RS-LMM74517/2023 | L | 570 | F | 39 | 20230102 |
| EPI_ISL_18773486 | NSP3 | hCoV-19/Brazil/RJ-LNN11952/2023 | L | 570 | stop | 53 | 20231022 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 570 | V | 223 | 20250116 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | L | 570 | K | 8 | 20220804 |
| EPI_ISL_4486311 | NSP3 | hCoV-19/India/DL-NCDC-4209208/2021 | L | 570 | insAHAEXX | 3 | 20210616 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | L | 570 | N | 73 | 20230131 |
| EPI_ISL_2965802 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-4061/2021 | L | 570 | W | 1 | 20210528 |
| EPI_ISL_13829377 | NSP3 | hCoV-19/USA/ID-IBL-832966/2022 | L | 570 | H | 6 | 20220629 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | L | 570 | insP | 1 | 20210809 |
| EPI_ISL_11060420 | NSP3 | hCoV-19/India/DL-NCDC-560950/2021 | L | 570 | insAXX | 2 | 20210909 |
| EPI_ISL_18373114 | NSP3 | hCoV-19/USA/NY-PBRI-NYC2O001/2023 | L | 570 | P | 2 | 20230917 |
| EPI_ISL_13829382 | NSP3 | hCoV-19/USA/ID-IBL-832972/2022 | L | 570 | T | 14 | 20220629 |
| EPI_ISL_11823798 | NSP3 | hCoV-19/Pakistan/AKU-01/2022 | L | 570 | E | 1 | 20220209 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | L | 570 | Q | 2 | 20230404 |
| EPI_ISL_11074110 | NSP3 | hCoV-19/India/DL-NCDC-740931/2021 | L | 570 | insNLS | 4 | 20211226 |
| EPI_ISL_1730548 | NSP3 | hCoV-19/England/OXON-F7FC45/2021 | L | 570 | J | 2 | 20210330 |
| EPI_ISL_12861588 | NSP3 | hCoV-19/France/BFC-HMN-22052020157/2022 | L | 570 | Y | 2 | 20220419 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 570 | D | 7 | 20220509 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | L | 570 | R | 19 | 20231020 |
| EPI_ISL_17605351 | NSP3 | hCoV-19/Thailand/NIC_BKK_1595/2023 | L | 570 | G | 3 | 20230425 |
| EPI_ISL_4470133 | NSP3 | hCoV-19/India/DL-NCDC-330953/2021 | L | 570 | insS | 1 | 20210506 |
| EPI_ISL_17821692 | NSP3 | hCoV-19/Brazil/RS-LMM74181/2023 | L | 570 | A | 3 | 20230320 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | L | 570 | del | 381 | 20240320 |
| EPI_ISL_19242878 | NSP3 | hCoV-19/Israel/SMC-7117714/2024 | L | 570 | S | 58 | 20240623 |
| EPI_ISL_18743287 | NSP3 | hCoV-19/USA/TX-HMH-M-137122/2024 | L | 570 | I | 118 | 20240101 |
| EPI_ISL_12674536 | NSP3 | hCoV-19/Germany/SN-RKI-I-784729/2022 | L | 570 | insGXX | 1 | 20220503 |
| EPI_ISL_19143511 | NSP3 | hCoV-19/Pakistan/GRH42626/2024 | M | 571 | del | 377 | 20240320 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | M | 571 | A | 38 | 20231020 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | M | 571 | W | 3 | 20220721 |
| EPI_ISL_11106803 | NSP3 | hCoV-19/India/DL-NCDC-740963/2021 | M | 571 | insHAEXXX | 1 | 20211220 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | M | 571 | D | 1 | 20210318 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | M | 571 | L | 154 | 20250116 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | M | 571 | R | 20 | 20230403 |
| EPI_ISL_15334615 | NSP3 | hCoV-19/Chile/MA-114103/2022 | M | 571 | Y | 4 | 20220921 |
| EPI_ISL_17591891 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3244/2023 | M | 571 | N | 5 | 20230418 |
| EPI_ISL_10924499 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11812/2022 | M | 571 | Q | 5 | 20220228 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | M | 571 | C | 13 | 20220928 |
| EPI_ISL_17417888 | NSP3 | hCoV-19/Thailand/NIC_PNB_1020/2023 | M | 571 | P | 3 | 20230109 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | M | 571 | F | 1 | 20210809 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | M | 571 | T | 83 | 20230410 |
| EPI_ISL_11793576 | NSP3 | hCoV-19/India/KA-SEQ_14500_S361_R1_001/2022 | M | 571 | H | 1 | 20220215 |
| EPI_ISL_19506224 | NSP3 | hCoV-19/South Korea/KDCA296094/2024 | M | 571 | V | 103 | 20240926 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | M | 571 | S | 7 | 20230429 |
| EPI_ISL_16761475 | NSP3 | hCoV-19/Chile/CO-5917/2023 | M | 571 | G | 6 | 20230124 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | M | 571 | K | 51 | 20230401 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | M | 571 | stop | 7 | 20220823 |
| EPI_ISL_19273078 | NSP3 | hCoV-19/South Korea/KDCA293585/2024 | M | 571 | I | 280 | 20240627 |
| EPI_ISL_17821639 | NSP3 | hCoV-19/Brazil/RS-LMM74539/2023 | P | 572 | H | 14 | 20230427 |
| EPI_ISL_9533393 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-337775/2022 | P | 572 | I | 1 | 20220127 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | P | 572 | N | 18 | 20250116 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | P | 572 | R | 8 | 20230403 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | P | 572 | insC | 2 | 20200807 |
| EPI_ISL_17201584 | NSP3 | hCoV-19/Chile/RM-19691/2023 | P | 572 | K | 18 | 20230306 |
| EPI_ISL_18301814 | NSP3 | hCoV-19/Italy/LOM-09214616/2023 | P | 572 | T | 17 | 20230921 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | P | 572 | insANAC | 1 | 20200803 |
| EPI_ISL_15693017 | NSP3 | hCoV-19/USA/ID-IBL-861143/2022 | P | 572 | C | 9 | 20221019 |
| EPI_ISL_15334615 | NSP3 | hCoV-19/Chile/MA-114103/2022 | P | 572 | M | 3 | 20220921 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | P | 572 | del | 391 | 20230815 |
| EPI_ISL_18468737 | NSP3 | hCoV-19/Bulgaria/1305/2023 | P | 572 | Q | 61 | 20230131 |
| EPI_ISL_17238811 | NSP3 | hCoV-19/Italy/CAM-90390374702_IZSM_COLLI_TIGEM/2023 | P | 572 | V | 5 | 20230218 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | P | 572 | E | 9 | 20220823 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | P | 572 | A | 23 | 20231020 |
| EPI_ISL_17602987 | NSP3 | hCoV-19/Thailand/NIC_ATG_1218/2023 | P | 572 | S | 34 | 20230410 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | P | 572 | insstopFQL | 16 | 20230401 |
| EPI_ISL_17401720 | NSP3 | hCoV-19/Chile/RM-25524/2023 | P | 572 | G | 6 | 20230322 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | P | 572 | F | 2 | 20210806 |
| EPI_ISL_18895949 | NSP3 | hCoV-19/Spain/MC-HCUVA-70018577/2024 | P | 572 | L | 82 | 20240112 |
| EPI_ISL_8803760 | NSP3 | hCoV-19/India/GA-NCCS-3055100219829/2021 | V | 573 | insNA | 45 | 20210731 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | V | 573 | insH | 1 | 20210525 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | V | 573 | N | 2 | 20230403 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | V | 573 | T | 14 | 20220901 |
| EPI_ISL_16910777 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-1505/2022 | V | 573 | F | 3 | 20221209 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | V | 573 | Y | 26 | 20230401 |
| EPI_ISL_17693622 | NSP3 | hCoV-19/India/UT-NCDC-5209165/2021 | V | 573 | insEXXXXX | 3 | 20210803 |
| EPI_ISL_11051075 | NSP3 | hCoV-19/India/BR-NCDC-4709122/2021 | V | 573 | insEXXXX | 1 | 20210622 |
| EPI_ISL_17201584 | NSP3 | hCoV-19/Chile/RM-19691/2023 | V | 573 | K | 20 | 20230306 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | V | 573 | C | 6 | 20220721 |
| EPI_ISL_13346740 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2329/2022 | V | 573 | W | 1 | 20220531 |
| EPI_ISL_17774537 | NSP3 | hCoV-19/Thailand/NIC_KSN_4844/2023 | V | 573 | A | 84 | 20230523 |
| EPI_ISL_13647581 | NSP3 | hCoV-19/USA/KS-KSU-2830/2022 | V | 573 | D | 2 | 20220622 |
| EPI_ISL_17098366 | NSP3 | hCoV-19/England/BRBR-326E4D1B/2023 | V | 573 | L | 35 | 20230225 |
| EPI_ISL_7547075 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101121-1040/2021 | V | 573 | insNACL | 1 | 20211011 |
| EPI_ISL_14308005 | NSP3 | hCoV-19/Chile/LR-93058/2022 | V | 573 | Q | 4 | 20220726 |
| EPI_ISL_19657590 | NSP3 | hCoV-19/Canada/AB-ABPHL-129625/2024 | V | 573 | I | 822 | 20241220 |
| EPI_ISL_13919801 | NSP3 | hCoV-19/USA/OR_UO_MAP005016/2022 | V | 573 | insNAF | 2 | 20220603 |
| EPI_ISL_15377059 | NSP3 | hCoV-19/USA/ID-IBL-857506/2022 | V | 573 | stop | 24 | 20220921 |
| EPI_ISL_11343837 | NSP3 | hCoV-19/France/GES-HMN-22032040237/2022 | V | 573 | G | 1 | 20220228 |
| EPI_ISL_17238811 | NSP3 | hCoV-19/Italy/CAM-90390374702_IZSM_COLLI_TIGEM/2023 | V | 573 | R | 4 | 20230218 |
| EPI_ISL_17349896 | NSP3 | hCoV-19/Chile/AT-23757/2023 | V | 573 | H | 8 | 20230316 |
| EPI_ISL_11793441 | NSP3 | hCoV-19/India/KA-SEQ_14205_S66_R1_001/2022 | V | 573 | P | 1 | 20220214 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | V | 573 | S | 31 | 20230406 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | V | 573 | del | 373 | 20230815 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | V | 573 | E | 1 | 20231020 |
| EPI_ISL_13736365 | NSP3 | hCoV-19/Chile/AR-81563/2022 | V | 573 | M | 2 | 20220629 |
| EPI_ISL_17774537 | NSP3 | hCoV-19/Thailand/NIC_KSN_4844/2023 | C | 574 | L | 8 | 20230523 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 574 | P | 1 | 20220210 |
| EPI_ISL_13829377 | NSP3 | hCoV-19/USA/ID-IBL-832966/2022 | C | 574 | insLS | 1 | 20220629 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | C | 574 | T | 2 | 20230403 |
| EPI_ISL_10080737 | NSP3 | hCoV-19/India/KA-SEQ_9674_S85_R1_001/2022 | C | 574 | insY | 1 | 20220102 |
| EPI_ISL_10045279 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-345192/2022 | C | 574 | H | 1 | 20220208 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | C | 574 | insstop | 1 | 20210525 |
| EPI_ISL_13079013 | NSP3 | hCoV-19/India/MH-INSACOG-IP12225/2022 | C | 574 | insHA | 6 | 20220513 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | C | 574 | I | 35 | 20230406 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | C | 574 | V | 7 | 20250116 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | C | 574 | del | 383 | 20230815 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | C | 574 | F | 39 | 20230429 |
| EPI_ISL_11109927 | NSP3 | hCoV-19/India/CH-NCDC-64098/2021 | C | 574 | insRRNTQXXXXX | 1 | 20211107 |
| EPI_ISL_17262617 | NSP3 | hCoV-19/USA/IL-3092023016/2023 | C | 574 | W | 6 | 20230307 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | C | 574 | E | 1 | 20231020 |
| EPI_ISL_17813710 | NSP3 | hCoV-19/Cabo Verde/ST-AG0027/2023 | C | 574 | stop | 4 | 20230427 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | C | 574 | D | 4 | 20220210 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | C | 574 | Q | 2 | 20210918 |
| EPI_ISL_11051586 | NSP3 | hCoV-19/India/JK-NCDC-51098/2021 | C | 574 | insXXX | 1 | 20210720 |
| EPI_ISL_11053769 | NSP3 | hCoV-19/India/DL-NCDC-6209362/2021 | C | 574 | insRRNTHXXXXXX | 4 | 20211107 |
| EPI_ISL_18301814 | NSP3 | hCoV-19/Italy/LOM-09214616/2023 | C | 574 | G | 9 | 20230921 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | C | 574 | R | 13 | 20241113 |
| EPI_ISL_17821641 | NSP3 | hCoV-19/Brazil/RS-LMM74536/2023 | C | 574 | Y | 17 | 20230427 |
| EPI_ISL_19108480 | NSP3 | hCoV-19/England/CLIMB-CM7YR8P6/2024 | C | 574 | S | 43 | 20240424 |
| EPI_ISL_17349896 | NSP3 | hCoV-19/Chile/AT-23757/2023 | C | 574 | A | 14 | 20230316 |
| EPI_ISL_19831372 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56871/2025 | V | 575 | M | 658 | 20250310 |
| EPI_ISL_16761475 | NSP3 | hCoV-19/Chile/CO-5917/2023 | V | 575 | W | 9 | 20230124 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | V | 575 | del | 393 | 20230815 |
| EPI_ISL_17821641 | NSP3 | hCoV-19/Brazil/RS-LMM74536/2023 | V | 575 | E | 17 | 20230427 |
| EPI_ISL_19270799 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189712/2024 | V | 575 | G | 17 | 20240613 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | V | 575 | Y | 4 | 20220804 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | V | 575 | T | 4 | 20230418 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | V | 575 | insSN | 25 | 20230406 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | V | 575 | Q | 21 | 20230403 |
| EPI_ISL_19774475 | NSP3 | hCoV-19/Spain/MD-HGUGM-65135688/2025 | V | 575 | L | 608 | 20250129 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | V | 575 | I | 34 | 20230410 |
| EPI_ISL_11793450 | NSP3 | hCoV-19/India/KA-SEQ_14220_S81_R1_001/2022 | V | 575 | S | 4 | 20220215 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | V | 575 | N | 5 | 20221121 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | V | 575 | insSVW | 2 | 20211031 |
| EPI_ISL_3759988 | NSP3 | hCoV-19/USA/ID-IBL-747478/2021 | V | 575 | insHSW | 1 | 20210809 |
| EPI_ISL_17201584 | NSP3 | hCoV-19/Chile/RM-19691/2023 | V | 575 | K | 17 | 20230306 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | V | 575 | insSG | 1 | 20211019 |
| EPI_ISL_17821650 | NSP3 | hCoV-19/Brazil/RS-LMM74517/2023 | V | 575 | R | 6 | 20230102 |
| EPI_ISL_11793467 | NSP3 | hCoV-19/India/KA-SEQ_14248_S109_R1_001/2022 | V | 575 | H | 3 | 20220217 |
| EPI_ISL_19681459 | NSP3 | hCoV-19/Germany/MV-RKI-I-1147335/2024 | V | 575 | A | 1627 | 20241230 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 575 | C | 5 | 20250116 |
| EPI_ISL_17007037 | NSP3 | hCoV-19/England/BRBR-326D3D2E/2023 | E | 576 | Z | 11 | 20230215 |
| EPI_ISL_11054830 | NSP3 | hCoV-19/India/DL-NCDC-5509212/2021 | E | 576 | insXXXXX | 1 | 20210831 |
| EPI_ISL_17238819 | NSP3 | hCoV-19/Italy/CAM-90901446364_IZSM_COLLI_TIGEM/2023 | E | 576 | T | 5 | 20230219 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | E | 576 | P | 11 | 20230418 |
| EPI_ISL_18110547 | NSP3 | hCoV-19/USA/MS-MSPHL-0364/2023 | E | 576 | A | 54 | 20230804 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | E | 576 | N | 31 | 20231020 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 576 | K | 48 | 20250116 |
| EPI_ISL_17774497 | NSP3 | hCoV-19/Thailand/NIC_SNK_4685/2023 | E | 576 | G | 111 | 20230530 |
| EPI_ISL_12511461 | NSP3 | hCoV-19/Mozambique/INS-PNV0076317/2022 | E | 576 | R | 6 | 20220209 |
| EPI_ISL_17292232 | NSP3 | hCoV-19/England/BRBR-32709456/2023 | E | 576 | stop | 17 | 20230315 |
| EPI_ISL_15377059 | NSP3 | hCoV-19/USA/ID-IBL-857506/2022 | E | 576 | L | 23 | 20220921 |
| EPI_ISL_16213272 | NSP3 | hCoV-19/England/QEUH-3262483C/2022 | E | 576 | Y | 3 | 20221208 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | E | 576 | S | 29 | 20230429 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | E | 576 | del | 363 | 20230815 |
| EPI_ISL_14224102 | NSP3 | hCoV-19/USA/ID-IBL-835609/2022 | E | 576 | insstop | 2 | 20220708 |
| EPI_ISL_10729455 | NSP3 | hCoV-19/India/KA-SEQ_12797_S56_R1_001/2022 | E | 576 | F | 1 | 20220210 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | E | 576 | I | 4 | 20230403 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | E | 576 | W | 1 | 20210121 |
| EPI_ISL_19458711 | NSP3 | hCoV-19/France/CVL-IPP10532/2024 | E | 576 | D | 73 | 20240916 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | E | 576 | Q | 23 | 20221213 |
| EPI_ISL_14224102 | NSP3 | hCoV-19/USA/ID-IBL-835609/2022 | E | 576 | V | 5 | 20220708 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | E | 576 | C | 47 | 20220725 |
| EPI_ISL_13736365 | NSP3 | hCoV-19/Chile/AR-81563/2022 | E | 576 | H | 2 | 20220629 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | T | 577 | L | 18 | 20231020 |
| EPI_ISL_12599441 | NSP3 | hCoV-19/USA/ID-IBL-610958/2020 | T | 577 | Q | 1 | 20200314 |
| EPI_ISL_17474687 | NSP3 | hCoV-19/Pakistan/BATCH-02-SAMPLE14/2023 | T | 577 | P | 6 | 20230221 |
| EPI_ISL_17479494 | NSP3 | hCoV-19/Thailand/NIC_BKK_1065/2023 | T | 577 | insV | 1 | 20230314 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | T | 577 | V | 15 | 20230605 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | T | 577 | insWKL | 1 | 20210805 |
| EPI_ISL_17774497 | NSP3 | hCoV-19/Thailand/NIC_SNK_4685/2023 | T | 577 | M | 2 | 20230530 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | T | 577 | F | 1 | 20210802 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | T | 577 | W | 1 | 20210804 |
| EPI_ISL_19824315 | NSP3 | hCoV-19/South Korea/KDCA297308/2025 | T | 577 | S | 26 | 20250317 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | T | 577 | insLKPXXX | 1 | 20240716 |
| EPI_ISL_17238819 | NSP3 | hCoV-19/Italy/CAM-90901446364_IZSM_COLLI_TIGEM/2023 | T | 577 | H | 4 | 20230219 |
| EPI_ISL_19829146 | NSP3 | hCoV-19/USA/PA-CDC-LC1136436/2025 | T | 577 | I | 956 | 20250402 |
| EPI_ISL_17238811 | NSP3 | hCoV-19/Italy/CAM-90390374702_IZSM_COLLI_TIGEM/2023 | T | 577 | E | 2 | 20230218 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | T | 577 | del | 339 | 20230815 |
| EPI_ISL_15693017 | NSP3 | hCoV-19/USA/ID-IBL-861143/2022 | T | 577 | stop | 10 | 20221019 |
| EPI_ISL_15377059 | NSP3 | hCoV-19/USA/ID-IBL-857506/2022 | T | 577 | Y | 15 | 20220921 |
| EPI_ISL_19719230 | NSP3 | hCoV-19/Italy/VEN-ULSS8-7759223_VI/2025 | T | 577 | A | 3431 | 20250110 |
| EPI_ISL_19452290 | NSP3 | hCoV-19/USA/RI_RISHL_01937/2024 | T | 577 | N | 177 | 20240910 |
| EPI_ISL_11074110 | NSP3 | hCoV-19/India/DL-NCDC-740931/2021 | T | 577 | insTQXXXXXXXX | 1 | 20211226 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | T | 577 | insVRTNVYLAVFDKNLYD | 5 | 20221011 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | T | 577 | K | 44 | 20230406 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | T | 577 | G | 50 | 20220725 |
| EPI_ISL_17774497 | NSP3 | hCoV-19/Thailand/NIC_SNK_4685/2023 | K | 578 | Q | 48 | 20230530 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | K | 578 | D | 7 | 20221228 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 578 | del | 361 | 20250116 |
| EPI_ISL_19822361 | NSP3 | hCoV-19/New Zealand/25YA0817/2025 | K | 578 | R | 351 | 20250328 |
| EPI_ISL_18999274 | NSP3 | hCoV-19/USA/NJ-GBW-H20-360-0606/2024 | K | 578 | N | 182 | 20240314 |
| EPI_ISL_10080732 | NSP3 | hCoV-19/India/KA-SEQ_9682_S86_R1_001/2022 | K | 578 | insstopSstopTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20220102 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | K | 578 | A | 20 | 20230403 |
| EPI_ISL_11793545 | NSP3 | hCoV-19/India/KA-SEQ_14418_S279_R1_001/2022 | K | 578 | insstop | 1 | 20220202 |
| EPI_ISL_17201584 | NSP3 | hCoV-19/Chile/RM-19691/2023 | K | 578 | F | 15 | 20230306 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | K | 578 | P | 7 | 20230605 |
| EPI_ISL_11107686 | NSP3 | hCoV-19/India/MP-NCDC-670988/2021 | K | 578 | insHXXXXXXXXXX | 1 | 20211019 |
| EPI_ISL_17971515 | NSP3 | hCoV-19/USA/NC-ECU-119129907/2023 | K | 578 | S | 32 | 20230626 |
| EPI_ISL_9361663 | NSP3 | hCoV-19/India/TN-CBR-SEQ-7956/2021 | K | 578 | insstopSstopTPR | 3 | 20211106 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | K | 578 | H | 4 | 20221213 |
| EPI_ISL_10952409 | NSP3 | hCoV-19/USA/AK-PHL18217/2022 | K | 578 | M | 4 | 20220220 |
| EPI_ISL_17882150 | NSP3 | hCoV-19/Japan/PG-526521/2023 | K | 578 | T | 345 | 20230501 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | K | 578 | Y | 1 | 20211102 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | K | 578 | G | 1 | 20231020 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | K | 578 | V | 17 | 20230217 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | K | 578 | stop | 5 | 20221201 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 578 | I | 10 | 20230217 |
| EPI_ISL_7509645 | NSP3 | hCoV-19/USA/CA-CSMC523/2020 | K | 578 | W | 2 | 20201116 |
| EPI_ISL_12599441 | NSP3 | hCoV-19/USA/ID-IBL-610958/2020 | K | 578 | insHSFNYT | 1 | 20200314 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | K | 578 | insLKPstopF | 1 | 20210804 |
| EPI_ISL_19712621 | NSP3 | hCoV-19/Canada/ON-KHS-00100-v2/2025 | K | 578 | E | 57 | 20250103 |
| EPI_ISL_17238819 | NSP3 | hCoV-19/Italy/CAM-90901446364_IZSM_COLLI_TIGEM/2023 | K | 578 | L | 14 | 20230219 |
| EPI_ISL_17971515 | NSP3 | hCoV-19/USA/NC-ECU-119129907/2023 | A | 579 | C | 30 | 20230626 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | A | 579 | W | 1 | 20220804 |
| EPI_ISL_18886873 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00018841_01/2023 | A | 579 | P | 77 | 20230725 |
| EPI_ISL_19805715 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U794-1/2025 | A | 579 | T | 746 | 20250304 |
| EPI_ISL_7547075 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101121-1040/2021 | A | 579 | insstopFQLY | 2 | 20211011 |
| EPI_ISL_12298509 | NSP3 | hCoV-19/India/KA-SEQ_14524_S7_R1_001/2022 | A | 579 | I | 4 | 20220202 |
| EPI_ISL_17201584 | NSP3 | hCoV-19/Chile/RM-19691/2023 | A | 579 | Y | 15 | 20230306 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | A | 579 | H | 5 | 20231020 |
| EPI_ISL_19826299 | NSP3 | hCoV-19/Canada/ON-HSC-202501569-v1/2025 | A | 579 | V | 15129 | 20250330 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | A | 579 | N | 17 | 20221228 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | A | 579 | E | 47 | 20230406 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | A | 579 | insTN | 1 | 20230217 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | A | 579 | insstop | 1 | 20220825 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | A | 579 | K | 21 | 20230410 |
| EPI_ISL_17971546 | NSP3 | hCoV-19/USA/NC-ECU-118979152/2023 | A | 579 | L | 18 | 20230615 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 579 | del | 358 | 20250116 |
| EPI_ISL_19297764 | NSP3 | hCoV-19/Russia/MOS-RII-MH193908S/2024 | A | 579 | G | 28 | 20240531 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | A | 579 | insN | 1 | 20240319 |
| EPI_ISL_19270799 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189712/2024 | A | 579 | D | 17 | 20240613 |
| EPI_ISL_17474687 | NSP3 | hCoV-19/Pakistan/BATCH-02-SAMPLE14/2023 | A | 579 | R | 6 | 20230221 |
| EPI_ISL_11795929 | NSP3 | hCoV-19/India/KA_14111_S345_R1_001/2022 | A | 579 | stop | 60 | 20220220 |
| EPI_ISL_19695238 | NSP3 | hCoV-19/Japan/FR035-0010/2025 | A | 579 | S | 192 | 20250107 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | A | 579 | Q | 4 | 20230418 |
| EPI_ISL_18992264 | NSP3 | hCoV-19/Mexico/OAX_CIAD_01004441/2024 | A | 579 | F | 5 | 20240208 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | I | 580 | Y | 7 | 20221228 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | I | 580 | S | 67 | 20240319 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | I | 580 | E | 3 | 20221121 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | I | 580 | F | 7 | 20221213 |
| EPI_ISL_3079216 | NSP3 | hCoV-19/England/OXON-FA3A3F/2021 | I | 580 | Q | 1 | 20210708 |
| EPI_ISL_13718870 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2757/2022 | I | 580 | K | 3 | 20220620 |
| EPI_ISL_19423209 | NSP3 | hCoV-19/Spain/NC-CHN-01008784/2024 | I | 580 | T | 130 | 20240719 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | I | 580 | N | 21 | 20230404 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | I | 580 | insLstopFQLYS | 1 | 20210812 |
| EPI_ISL_19732432 | NSP3 | hCoV-19/Canada/ON-PHL-202503164/2025 | I | 580 | M | 348 | 20250129 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 580 | del | 350 | 20250116 |
| EPI_ISL_17479492 | NSP3 | hCoV-19/Thailand/NIC_BKK_1059/2023 | I | 580 | J | 13 | 20230310 |
| EPI_ISL_17238830 | NSP3 | hCoV-19/Italy/CAM-90390374222_IZSM_COLLI_TIGEM/2023 | I | 580 | P | 3 | 20230222 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | I | 580 | insstopstopD | 1 | 20210316 |
| EPI_ISL_12298509 | NSP3 | hCoV-19/India/KA-SEQ_14524_S7_R1_001/2022 | I | 580 | H | 2 | 20220202 |
| EPI_ISL_19829062 | NSP3 | hCoV-19/USA/NC-CDC-LC1136689/2025 | I | 580 | V | 3200 | 20250331 |
| EPI_ISL_11793463 | NSP3 | hCoV-19/India/KA-SEQ_14244_S105_R1_001/2022 | I | 580 | G | 5 | 20220217 |
| EPI_ISL_16377412 | NSP3 | hCoV-19/Tunisia/S-2881/2022 | I | 580 | W | 2 | 20220406 |
| EPI_ISL_17774537 | NSP3 | hCoV-19/Thailand/NIC_KSN_4844/2023 | I | 580 | stop | 12 | 20230523 |
| EPI_ISL_3495344 | NSP3 | hCoV-19/Germany/RP-RKI-I-195778/2021 | I | 580 | insPLGX | 1 | 20210731 |
| EPI_ISL_19299970 | NSP3 | hCoV-19/France/COR-RELAB-HCL724000322301/2024 | I | 580 | L | 233 | 20240712 |
| EPI_ISL_16815238 | NSP3 | hCoV-19/United Arab Emirates/BTC-6277/2021 | I | 580 | insVQLYS | 1 | 20210708 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | I | 580 | A | 4 | 20230410 |
| EPI_ISL_11066158 | NSP3 | hCoV-19/India/MP-NCDC-830911/2022 | I | 580 | insS | 9 | 20220201 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | V | 581 | F | 69 | 20240319 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 581 | C | 24 | 20250116 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | V | 581 | L | 77 | 20230406 |
| EPI_ISL_19373417 | NSP3 | hCoV-19/Mexico/CMX_InDRE_FB936/2024 | V | 581 | D | 12 | 20240403 |
| EPI_ISL_19825432 | NSP3 | hCoV-19/USA/NE-NPHL-RP252296/2025 | V | 581 | I | 554 | 20250404 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | V | 581 | S | 10 | 20230410 |
| EPI_ISL_19450771 | NSP3 | hCoV-19/England/CLIMB-CM7YRUPR/2024 | V | 581 | A | 29 | 20240915 |
| EPI_ISL_11793545 | NSP3 | hCoV-19/India/KA-SEQ_14418_S279_R1_001/2022 | V | 581 | T | 2 | 20220202 |
| EPI_ISL_17238811 | NSP3 | hCoV-19/Italy/CAM-90390374702_IZSM_COLLI_TIGEM/2023 | V | 581 | Y | 4 | 20230218 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | V | 581 | insstopPQ | 1 | 20220321 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 581 | P | 3 | 20230404 |
| EPI_ISL_14179985 | NSP3 | hCoV-19/USA/TX-HMH-M-108625/2022 | V | 581 | G | 4 | 20220724 |
| EPI_ISL_3299169 | NSP3 | hCoV-19/Sweden/UUH-000199123143/2021 | V | 581 | insXXX | 1 | 20210415 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | V | 581 | stop | 11 | 20220725 |
| EPI_ISL_18981215 | NSP3 | hCoV-19/USA/TX-HMH-M-139516/2024 | V | 581 | del | 381 | 20240214 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | V | 581 | R | 2 | 20230217 |
| EPI_ISL_17238830 | NSP3 | hCoV-19/Italy/CAM-90390374222_IZSM_COLLI_TIGEM/2023 | V | 581 | M | 5 | 20230222 |
| EPI_ISL_14004416 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-10151/2022 | V | 581 | H | 45 | 20220715 |
| EPI_ISL_14718232 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19515/2022 | V | 581 | E | 1 | 20220805 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | V | 581 | N | 10 | 20221213 |
| EPI_ISL_18263498 | NSP3 | hCoV-19/Morocco/INH-4412/2021 | V | 581 | K | 2 | 20210518 |
| EPI_ISL_11793463 | NSP3 | hCoV-19/India/KA-SEQ_14244_S105_R1_001/2022 | S | 582 | D | 4 | 20220217 |
| EPI_ISL_1914289 | NSP3 | hCoV-19/Morocco/FMP-248/2021 | S | 582 | M | 1 | 20210225 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | S | 582 | C | 4 | 20231020 |
| EPI_ISL_15693030 | NSP3 | hCoV-19/USA/ID-IBL-861490/2022 | S | 582 | V | 3 | 20221023 |
| EPI_ISL_5339759 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-50359/2021 | S | 582 | insF | 44 | 20210717 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | S | 582 | K | 3 | 20220825 |
| EPI_ISL_19270799 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189712/2024 | S | 582 | T | 99 | 20240613 |
| EPI_ISL_17403745 | NSP3 | hCoV-19/India/MH_BJCOG_5380/2023 | S | 582 | stop | 9 | 20230320 |
| EPI_ISL_18981215 | NSP3 | hCoV-19/USA/TX-HMH-M-139516/2024 | S | 582 | del | 355 | 20240214 |
| EPI_ISL_16626608 | NSP3 | hCoV-19/Latvia/22061181NI/2022 | S | 582 | R | 18 | 20221016 |
| EPI_ISL_17238811 | NSP3 | hCoV-19/Italy/CAM-90390374702_IZSM_COLLI_TIGEM/2023 | S | 582 | E | 4 | 20230218 |
| EPI_ISL_17304869 | NSP3 | hCoV-19/USA/TX-HMH-M-127347/2023 | S | 582 | Q | 11 | 20230318 |
| EPI_ISL_13307911 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2163/2022 | S | 582 | I | 1 | 20220528 |
| EPI_ISL_19823570 | NSP3 | hCoV-19/Croatia/HZJZ_8666/2025 | S | 582 | L | 1521 | 20250321 |
| EPI_ISL_17971515 | NSP3 | hCoV-19/USA/NC-ECU-119129907/2023 | S | 582 | Y | 11 | 20230626 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | S | 582 | H | 3 | 20220723 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 582 | G | 78 | 20250116 |
| EPI_ISL_9678152 | NSP3 | hCoV-19/India/MH-RFIP07372/2021 | S | 582 | insXXXXXXXXXX | 1 | 20211227 |
| EPI_ISL_19473848 | NSP3 | hCoV-19/South Korea/KDCA295897/2024 | S | 582 | P | 39 | 20240909 |
| EPI_ISL_19243282 | NSP3 | hCoV-19/Japan/FR011-0375/2024 | S | 582 | A | 102 | 20240620 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | S | 582 | N | 17 | 20240319 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | S | 582 | F | 3 | 20231007 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | S | 582 | W | 2 | 20221122 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | T | 583 | K | 2 | 20221122 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | T | 583 | P | 13 | 20231020 |
| EPI_ISL_19143506 | NSP3 | hCoV-19/Pakistan/13737613/2024 | T | 583 | stop | 4 | 20240319 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 583 | Q | 3 | 20250116 |
| EPI_ISL_19806548 | NSP3 | hCoV-19/Canada/ON-HSC-202501042-v1/2025 | T | 583 | I | 1658 | 20250129 |
| EPI_ISL_17089171 | NSP3 | hCoV-19/Chile/AR-14573/2023 | T | 583 | H | 5 | 20230222 |
| EPI_ISL_19762614 | NSP3 | hCoV-19/Spain/VC-CVA_GRAL-126738/2025 | T | 583 | N | 173 | 20250107 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | T | 583 | F | 6 | 20231007 |
| EPI_ISL_10924464 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11805/2022 | T | 583 | Y | 6 | 20220228 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | T | 583 | C | 4 | 20220825 |
| EPI_ISL_17304869 | NSP3 | hCoV-19/USA/TX-HMH-M-127347/2023 | T | 583 | L | 14 | 20230318 |
| EPI_ISL_3760019 | NSP3 | hCoV-19/USA/ID-IBL-747273/2021 | T | 583 | insK | 1 | 20210808 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | T | 583 | D | 3 | 20221121 |
| EPI_ISL_15377059 | NSP3 | hCoV-19/USA/ID-IBL-857506/2022 | T | 583 | V | 20 | 20220921 |
| EPI_ISL_19687509 | NSP3 | hCoV-19/USA/NY-PRL-250114_83C06/2025 | T | 583 | A | 128 | 20250105 |
| EPI_ISL_19270799 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189712/2024 | T | 583 | S | 38 | 20240613 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | T | 583 | R | 3 | 20220321 |
| EPI_ISL_18981215 | NSP3 | hCoV-19/USA/TX-HMH-M-139516/2024 | T | 583 | del | 362 | 20240214 |
| EPI_ISL_17971515 | NSP3 | hCoV-19/USA/NC-ECU-119129907/2023 | T | 583 | E | 9 | 20230626 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | I | 584 | F | 2 | 20220723 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 584 | Q | 2 | 20250116 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | I | 584 | insGD | 1 | 20210316 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | I | 584 | K | 7 | 20231020 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | I | 584 | D | 1 | 20220804 |
| EPI_ISL_10753324 | NSP3 | hCoV-19/India/KA-SEQ_13712_S152_R1_001/2022 | I | 584 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVSTI | 1 | 20220205 |
| EPI_ISL_19594322 | NSP3 | hCoV-19/South Korea/GJ-HERI-K2914/2024 | I | 584 | V | 154 | 20241028 |
| EPI_ISL_18981215 | NSP3 | hCoV-19/USA/TX-HMH-M-139516/2024 | I | 584 | del | 377 | 20240214 |
| EPI_ISL_18247117 | NSP3 | hCoV-19/USA/MS-MSPHL-0503/2023 | I | 584 | M | 9 | 20230830 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | I | 584 | T | 11 | 20230410 |
| EPI_ISL_3923091 | NSP3 | hCoV-19/USA/ID-IBL-749073/2021 | I | 584 | insstopIstopG | 1 | 20210813 |
| EPI_ISL_10753263 | NSP3 | hCoV-19/India/KA-SEQ_13871_S375_R1_001/2022 | I | 584 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20220201 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | I | 584 | insstopIstop | 1 | 20221213 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | I | 584 | G | 1 | 20220721 |
| EPI_ISL_4470133 | NSP3 | hCoV-19/India/DL-NCDC-330953/2021 | I | 584 | insCGNstopGCCstopWHXXXXXXX | 1 | 20210506 |
| EPI_ISL_17304869 | NSP3 | hCoV-19/USA/TX-HMH-M-127347/2023 | I | 584 | Y | 58 | 20230318 |
| EPI_ISL_16213272 | NSP3 | hCoV-19/England/QEUH-3262483C/2022 | I | 584 | R | 8 | 20221208 |
| EPI_ISL_19643002 | NSP3 | hCoV-19/Thailand/NIC_BKK_P3907/2024 | I | 584 | L | 58 | 20241212 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | I | 584 | N | 3 | 20220519 |
| EPI_ISL_18870180 | NSP3 | hCoV-19/India/MP-DRDE-01/2023 | I | 584 | insI | 1 | 20230422 |
| EPI_ISL_15116695 | NSP3 | hCoV-19/Chile/MA-107961/2022 | I | 584 | E | 2 | 20220829 |
| EPI_ISL_17238811 | NSP3 | hCoV-19/Italy/CAM-90390374702_IZSM_COLLI_TIGEM/2023 | I | 584 | S | 2 | 20230218 |
| EPI_ISL_17089171 | NSP3 | hCoV-19/Chile/AR-14573/2023 | I | 584 | A | 6 | 20230222 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | I | 584 | insFKS | 1 | 20231020 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | I | 584 | W | 1 | 20220804 |
| EPI_ISL_19613694 | NSP3 | hCoV-19/Honduras/AT-327/2024 | I | 584 | stop | 27 | 20240816 |
| EPI_ISL_19782365 | NSP3 | hCoV-19/USA/NY-NYCPHL-019503/2024 | I | 584 | J | 12 | 20240730 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | I | 584 | C | 13 | 20220427 |
| EPI_ISL_18163734 | NSP3 | hCoV-19/USA/MS-MSPHL-0455/2023 | Q | 585 | stop | 23 | 20230822 |
| EPI_ISL_18648202 | NSP3 | hCoV-19/USA/MS-MSPHL-0903/2023 | Q | 585 | P | 3 | 20231211 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | Q | 585 | G | 1 | 20210917 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | Q | 585 | Y | 8 | 20230217 |
| EPI_ISL_18378831 | NSP3 | hCoV-19/France/IDF-IPP22080/2023 | Q | 585 | K | 27 | 20230925 |
| EPI_ISL_18981215 | NSP3 | hCoV-19/USA/TX-HMH-M-139516/2024 | Q | 585 | del | 396 | 20240214 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | Q | 585 | N | 4 | 20220804 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Q | 585 | E | 16 | 20230410 |
| EPI_ISL_9533393 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-337775/2022 | Q | 585 | W | 2 | 20220127 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | Q | 585 | R | 130 | 20241113 |
| EPI_ISL_17466476 | NSP3 | hCoV-19/Chile/RM-27369/2023 | Q | 585 | insWNL | 11 | 20230329 |
| EPI_ISL_9569492 | NSP3 | hCoV-19/Denmark/DCGC-351037/2022 | Q | 585 | Z | 1 | 20220126 |
| EPI_ISL_7547077 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081721-1058/2021 | Q | 585 | C | 2 | 20210817 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | Q | 585 | insstopIstopGY | 1 | 20210805 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | Q | 585 | T | 47 | 20210915 |
| EPI_ISL_3079216 | NSP3 | hCoV-19/England/OXON-FA3A3F/2021 | Q | 585 | insIRV | 1 | 20210708 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | Q | 585 | D | 2 | 20220825 |
| EPI_ISL_19612425 | NSP3 | hCoV-19/Sichuan/MYCDC-XGCX280/2024 | Q | 585 | H | 533 | 20240607 |
| EPI_ISL_11795841 | NSP3 | hCoV-19/India/PY_13213_S93_R1_001/2022 | Q | 585 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVSTIQ | 1 | 20220204 |
| EPI_ISL_19752712 | NSP3 | hCoV-19/USA/KY-KSPHL-0036360/2024 | Q | 585 | L | 18 | 20241216 |
| EPI_ISL_12982378 | NSP3 | hCoV-19/Chile/RM-60095/2022 | Q | 585 | A | 6 | 20220513 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | Q | 585 | S | 85 | 20231020 |
| EPI_ISL_17201584 | NSP3 | hCoV-19/Chile/RM-19691/2023 | Q | 585 | I | 17 | 20230306 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | Q | 585 | V | 11 | 20221213 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | Q | 585 | F | 2 | 20220623 |
| EPI_ISL_18287769 | NSP3 | hCoV-19/France/IDF-AphpSA-882305093166/2023 | R | 586 | K | 50 | 20230529 |
| EPI_ISL_17304869 | NSP3 | hCoV-19/USA/TX-HMH-M-127347/2023 | R | 586 | V | 14 | 20230318 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | R | 586 | D | 4 | 20230404 |
| EPI_ISL_17821658 | NSP3 | hCoV-19/Brazil/RS-LMM74485/2023 | R | 586 | Y | 9 | 20230424 |
| EPI_ISL_19768118 | NSP3 | hCoV-19/USA/WA-GBW-GKPLAAAA29651/2025 | R | 586 | C | 4924 | 20250225 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | R | 586 | N | 4 | 20211109 |
| EPI_ISL_17971515 | NSP3 | hCoV-19/USA/NC-ECU-119129907/2023 | R | 586 | Q | 11 | 20230626 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | R | 586 | insW | 3 | 20230217 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | R | 586 | M | 8 | 20230410 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | R | 586 | insstop | 1 | 20220825 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | R | 586 | P | 9 | 20230217 |
| EPI_ISL_17270325 | NSP3 | hCoV-19/Chile/NB-22076/2023 | R | 586 | E | 3 | 20230310 |
| EPI_ISL_12688297 | NSP3 | hCoV-19/Chile/RM-51372/2022 | R | 586 | insVL | 2 | 20220418 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | R | 586 | insstopIstopAAL | 1 | 20210915 |
| EPI_ISL_19561668 | NSP3 | hCoV-19/Japan/FR049-1119/2024 | R | 586 | H | 935 | 20241105 |
| EPI_ISL_16626608 | NSP3 | hCoV-19/Latvia/22061181NI/2022 | R | 586 | insVNIRVL | 1 | 20221016 |
| EPI_ISL_17607285 | NSP3 | hCoV-19/Wales/PHWC-PKX7N7/2023 | R | 586 | S | 62 | 20230412 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | R | 586 | del | 353 | 20230815 |
| EPI_ISL_19270799 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189712/2024 | R | 586 | G | 4 | 20240613 |
| EPI_ISL_11793463 | NSP3 | hCoV-19/India/KA-SEQ_14244_S105_R1_001/2022 | R | 586 | F | 3 | 20220217 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | R | 586 | T | 2 | 20250116 |
| EPI_ISL_951124 | NSP3 | hCoV-19/England/OXON-F4AFA4/2021 | R | 586 | insIRVL | 1 | 20210105 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | R | 586 | W | 29 | 20230406 |
| EPI_ISL_14881077 | NSP3 | hCoV-19/USA/ID-IBL-847392/2022 | R | 586 | stop | 3 | 20220822 |
| EPI_ISL_18878781 | NSP3 | hCoV-19/USA/IL-RIPHL_122607_G/2024 | R | 586 | L | 355 | 20240111 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | R | 586 | A | 48 | 20231020 |
| EPI_ISL_18685972 | NSP3 | hCoV-19/Russia/SPE-RII-MH152932S/2023 | K | 587 | N | 254 | 20231127 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | K | 587 | stop | 13 | 20221122 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 587 | T | 68 | 20250116 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | K | 587 | F | 3 | 20220804 |
| EPI_ISL_13044526 | NSP3 | hCoV-19/USA/ID-IBL-821031/2022 | K | 587 | P | 2 | 20220516 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | K | 587 | A | 4 | 20231020 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | K | 587 | V | 5 | 20220725 |
| EPI_ISL_12753288 | NSP3 | hCoV-19/Russia/CU-CRIE-7726527951/2022 | K | 587 | H | 3 | 20220201 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | K | 587 | insTAstop | 1 | 20211109 |
| EPI_ISL_11053771 | NSP3 | hCoV-19/India/DL-NCDC-6209364/2021 | K | 587 | insTHXXXXXXXXXXXXXXXXXXX | 3 | 20211114 |
| EPI_ISL_19799538 | NSP3 | hCoV-19/USA/TX-HMH-M-147475/2025 | K | 587 | R | 366 | 20250205 |
| EPI_ISL_17238830 | NSP3 | hCoV-19/Italy/CAM-90390374222_IZSM_COLLI_TIGEM/2023 | K | 587 | Y | 5 | 20230222 |
| EPI_ISL_10910373 | NSP3 | hCoV-19/Germany/HH-RKI-I-592818/2022 | K | 587 | Q | 10 | 20220225 |
| EPI_ISL_19445021 | NSP3 | hCoV-19/USA/NY-NYULH-21053/2024 | K | 587 | I | 16 | 20240917 |
| EPI_ISL_11053719 | NSP3 | hCoV-19/India/DL-NCDC-6209289/2021 | K | 587 | insTHQXXXXXXXXXXXXXXXXXX | 2 | 20211110 |
| EPI_ISL_11066158 | NSP3 | hCoV-19/India/MP-NCDC-830911/2022 | K | 587 | insTXXXXXXXXXXXXXXXXXXX | 4 | 20220201 |
| EPI_ISL_17658711 | NSP3 | hCoV-19/Italy/LOM-ASST-69365866/2023 | K | 587 | S | 29 | 20230510 |
| EPI_ISL_19013262 | NSP3 | hCoV-19/Japan/PG-595007/2024 | K | 587 | E | 115 | 20240131 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 587 | L | 4 | 20230410 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | K | 587 | del | 321 | 20230815 |
| EPI_ISL_13080928 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-1976/2022 | K | 587 | G | 1 | 20220519 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | K | 587 | D | 1 | 20220427 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | Y | 588 | S | 8 | 20221011 |
| EPI_ISL_17466476 | NSP3 | hCoV-19/Chile/RM-27369/2023 | Y | 588 | M | 15 | 20230329 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | Y | 588 | G | 3 | 20231007 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | Y | 588 | del | 319 | 20230815 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Y | 588 | A | 2 | 20230410 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | Y | 588 | D | 7 | 20241113 |
| EPI_ISL_17304869 | NSP3 | hCoV-19/USA/TX-HMH-M-127347/2023 | Y | 588 | I | 42 | 20230318 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | Y | 588 | R | 5 | 20231020 |
| EPI_ISL_17821658 | NSP3 | hCoV-19/Brazil/RS-LMM74485/2023 | Y | 588 | F | 28 | 20230424 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 588 | L | 29 | 20250116 |
| EPI_ISL_13113216 | NSP3 | hCoV-19/Turkey/HSGM-IST-01751/2022 | Y | 588 | Q | 1 | 20220525 |
| EPI_ISL_16919746 | NSP3 | hCoV-19/USA/TX-HMH-M-124525/2023 | Y | 588 | N | 24 | 20230130 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | Y | 588 | T | 7 | 20221121 |
| EPI_ISL_18594586 | NSP3 | hCoV-19/Saint Lucia/183693/2023 | Y | 588 | C | 47 | 20230712 |
| EPI_ISL_18403416 | NSP3 | hCoV-19/Germany/SL-RKI-I-1138575/2023 | Y | 588 | H | 29 | 20230925 |
| EPI_ISL_14718232 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19515/2022 | Y | 588 | K | 1 | 20220805 |
| EPI_ISL_12947356 | NSP3 | hCoV-19/Japan/PG-231785/2022 | Y | 588 | V | 2 | 20220324 |
| EPI_ISL_14583736 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS.22.16500/2022 | Y | 588 | stop | 7 | 20220725 |
| EPI_ISL_17201584 | NSP3 | hCoV-19/Chile/RM-19691/2023 | Y | 588 | E | 16 | 20230306 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | K | 589 | insYTAstopIstop | 15 | 20230403 |
| EPI_ISL_3078900 | NSP3 | hCoV-19/England/OXON-FA17EF/2020 | K | 589 | insLstop | 1 | 20201130 |
| EPI_ISL_15693017 | NSP3 | hCoV-19/USA/ID-IBL-861143/2022 | K | 589 | insAstopIstop | 3 | 20221019 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | K | 589 | H | 2 | 20210917 |
| EPI_ISL_14588255 | NSP3 | hCoV-19/USA/ID-IBL-844143/2022 | K | 589 | stop | 17 | 20220808 |
| EPI_ISL_19314778 | NSP3 | hCoV-19/USA/CA-LACPHL-AY07502/2024 | K | 589 | T | 63 | 20240715 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | K | 589 | V | 3 | 20230217 |
| EPI_ISL_18371179 | NSP3 | hCoV-19/Turkey/HSGM-AA00630/2023 | K | 589 | M | 227 | 20230917 |
| EPI_ISL_6989957 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-67163/2021 | K | 589 | insYTAstopIW | 1 | 20211030 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 589 | S | 6 | 20230217 |
| EPI_ISL_12599441 | NSP3 | hCoV-19/USA/ID-IBL-610958/2020 | K | 589 | W | 1 | 20200314 |
| EPI_ISL_19735444 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56263/2025 | K | 589 | N | 1130 | 20250130 |
| EPI_ISL_19814334 | NSP3 | hCoV-19/Luxembourg/LNS8224340/2025 | K | 589 | R | 879 | 20250213 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | K | 589 | I | 1 | 20220725 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | K | 589 | Y | 5 | 20231020 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | K | 589 | insCFT | 1 | 20220825 |
| EPI_ISL_12947356 | NSP3 | hCoV-19/Japan/PG-231785/2022 | K | 589 | F | 1 | 20220324 |
| EPI_ISL_17466476 | NSP3 | hCoV-19/Chile/RM-27369/2023 | K | 589 | L | 18 | 20230329 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | K | 589 | insLNTR | 1 | 20200715 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | K | 589 | insLY | 1 | 20221122 |
| EPI_ISL_14333186 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-95602/2022 | K | 589 | P | 3 | 20220722 |
| EPI_ISL_19684170 | NSP3 | hCoV-19/USA/CO-CDPHE-42779129/2024 | K | 589 | E | 132 | 20241230 |
| EPI_ISL_15693030 | NSP3 | hCoV-19/USA/ID-IBL-861490/2022 | K | 589 | G | 4 | 20221023 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | K | 589 | del | 328 | 20230815 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | K | 589 | Q | 6 | 20221122 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | K | 589 | insNI | 1 | 20220321 |
| EPI_ISL_13812285 | NSP3 | hCoV-19/USA/ID-IBL-831832/2022 | G | 590 | N | 7 | 20220624 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | G | 590 | insCFstopLWCstop | 1 | 20210701 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | G | 590 | K | 8 | 20221011 |
| EPI_ISL_19739442 | NSP3 | hCoV-19/USA/NJ-CDC-LC1131649/2025 | G | 590 | D | 153 | 20250204 |
| EPI_ISL_19610852 | NSP3 | hCoV-19/South Korea/KDCA296509/2024 | G | 590 | A | 17 | 20241118 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | G | 590 | E | 25 | 20230406 |
| EPI_ISL_16852850 | NSP3 | hCoV-19/USA/ID-IBL-872976/2023 | G | 590 | Y | 5 | 20230110 |
| EPI_ISL_1914289 | NSP3 | hCoV-19/Morocco/FMP-248/2021 | G | 590 | P | 1 | 20210225 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 590 | T | 1 | 20210318 |
| EPI_ISL_19071012 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6695/2024 | G | 590 | S | 223 | 20240316 |
| EPI_ISL_19438885 | NSP3 | hCoV-19/USA/CO-CDPHE-42240816/2024 | G | 590 | C | 18 | 20240822 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | G | 590 | R | 45 | 20240716 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | G | 590 | M | 1 | 20210525 |
| EPI_ISL_18137242 | NSP3 | hCoV-19/USA/MS-MSPHL-0382/2023 | G | 590 | V | 81 | 20230810 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | G | 590 | insN | 1 | 20220225 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | G | 590 | H | 1 | 20220519 |
| EPI_ISL_12599441 | NSP3 | hCoV-19/USA/ID-IBL-610958/2020 | G | 590 | L | 1 | 20200314 |
| EPI_ISL_13829400 | NSP3 | hCoV-19/USA/ID-IBL-833514/2022 | G | 590 | stop | 3 | 20220630 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | G | 590 | I | 3 | 20231020 |
| EPI_ISL_12410953 | NSP3 | hCoV-19/France/IDF-HMN-22042130203/2022 | G | 590 | F | 2 | 20220411 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | G | 590 | del | 387 | 20230815 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | I | 591 | A | 2 | 20230404 |
| EPI_ISL_19373594 | NSP3 | hCoV-19/Mexico/QUE_InDRE_FB1023/2024 | I | 591 | N | 7 | 20240518 |
| EPI_ISL_17500128 | NSP3 | hCoV-19/Chile/RM-29578/2023 | I | 591 | insLAHA | 3 | 20230406 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | I | 591 | P | 1 | 20220225 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | I | 591 | del | 400 | 20230815 |
| EPI_ISL_14570652 | NSP3 | hCoV-19/Czech Republic/FNO-220576/2022 | I | 591 | F | 7 | 20220530 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | I | 591 | Q | 3 | 20230217 |
| EPI_ISL_17466476 | NSP3 | hCoV-19/Chile/RM-27369/2023 | I | 591 | H | 11 | 20230329 |
| EPI_ISL_18923228 | NSP3 | hCoV-19/USA/MS-MSPHL-0133/2024 | I | 591 | M | 22 | 20240207 |
| EPI_ISL_3588754 | NSP3 | hCoV-19/USA/ID-IBL-746258/2021 | I | 591 | insL | 1 | 20210801 |
| EPI_ISL_14584694 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16379/2022 | I | 591 | S | 2 | 20220725 |
| EPI_ISL_19420730 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08395/2024 | I | 591 | L | 66 | 20240903 |
| EPI_ISL_12174847 | NSP3 | hCoV-19/USA/NY-PBRI-C22A020/2022 | I | 591 | R | 8 | 20220411 |
| EPI_ISL_17084484 | NSP3 | hCoV-19/Chile/RM-13729/2023 | I | 591 | insLA | 2 | 20230221 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | I | 591 | D | 9 | 20230217 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | I | 591 | insstop | 1 | 20210918 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 591 | V | 437 | 20250116 |
| EPI_ISL_14179947 | NSP3 | hCoV-19/USA/TX-HMH-M-108587/2022 | I | 591 | J | 2 | 20220721 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | I | 591 | Y | 29 | 20230403 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | I | 591 | W | 1 | 20200715 |
| EPI_ISL_17821641 | NSP3 | hCoV-19/Brazil/RS-LMM74536/2023 | I | 591 | T | 10 | 20230427 |
| EPI_ISL_12947356 | NSP3 | hCoV-19/Japan/PG-231785/2022 | I | 591 | K | 3 | 20220324 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | I | 591 | stop | 4 | 20230217 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | I | 591 | C | 2 | 20220804 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | K | 592 | F | 2 | 20210319 |
| EPI_ISL_7509645 | NSP3 | hCoV-19/USA/CA-CSMC523/2020 | K | 592 | insE | 1 | 20201116 |
| EPI_ISL_19203841 | NSP3 | hCoV-19/Japan/FR014-0162/2024 | K | 592 | N | 27 | 20240515 |
| EPI_ISL_12174847 | NSP3 | hCoV-19/USA/NY-PBRI-C22A020/2022 | K | 592 | M | 4 | 20220411 |
| EPI_ISL_17466476 | NSP3 | hCoV-19/Chile/RM-27369/2023 | K | 592 | A | 13 | 20230329 |
| EPI_ISL_18980871 | NSP3 | hCoV-19/USA/TX-HMH-M-140179/2024 | K | 592 | I | 13 | 20240301 |
| EPI_ISL_18797882 | NSP3 | hCoV-19/Hubei/HCDC-WH3626/2023 | K | 592 | Q | 13 | 20231213 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | K | 592 | insGSstopMstopstopWL | 1 | 20210806 |
| EPI_ISL_19777268 | NSP3 | hCoV-19/Qatar/NIC-39-VI-0002706/2025 | K | 592 | R | 145 | 20250108 |
| EPI_ISL_19270799 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189712/2024 | K | 592 | stop | 34 | 20240613 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | K | 592 | C | 1 | 20230217 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | K | 592 | S | 14 | 20230605 |
| EPI_ISL_17084484 | NSP3 | hCoV-19/Chile/RM-13729/2023 | K | 592 | H | 2 | 20230221 |
| EPI_ISL_4225303 | NSP3 | hCoV-19/Germany/BW-RKI-I-230377/2021 | K | 592 | P | 2 | 20210827 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 592 | T | 29 | 20230116 |
| EPI_ISL_19416711 | NSP3 | hCoV-19/Canada/NS-NSH-728553/2024 | K | 592 | E | 89 | 20240819 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | K | 592 | V | 14 | 20230217 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | K | 592 | D | 3 | 20231020 |
| EPI_ISL_12146137 | NSP3 | hCoV-19/Turkey/HSGM-GS1594/2022 | K | 592 | Y | 4 | 20220401 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 592 | del | 407 | 20250116 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | K | 592 | W | 34 | 20240716 |
| EPI_ISL_17466548 | NSP3 | hCoV-19/Chile/RM-27468/2023 | K | 592 | L | 23 | 20230401 |
| EPI_ISL_19380215 | NSP3 | hCoV-19/USA/MS-MSPHL-0307/2024 | I | 593 | R | 7 | 20240805 |
| EPI_ISL_17588334 | NSP3 | hCoV-19/USA/TX-HMH-M-128201/2023 | I | 593 | N | 36 | 20230410 |
| EPI_ISL_19435000 | NSP3 | hCoV-19/Austria/AGES-1100846/2024 | I | 593 | V | 315 | 20240724 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | I | 593 | H | 1 | 20210802 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | I | 593 | L | 83 | 20240716 |
| EPI_ISL_12291393 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1127/2022 | I | 593 | Q | 2 | 20220119 |
| EPI_ISL_19348695 | NSP3 | hCoV-19/Morocco/21/2020 | I | 593 | G | 1 | 20200627 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | I | 593 | K | 4 | 20220723 |
| EPI_ISL_14710260 | NSP3 | hCoV-19/USA/IN-CDC-STM-XZNHVJAH5/2022 | I | 593 | J | 1 | 20220814 |
| EPI_ISL_17466476 | NSP3 | hCoV-19/Chile/RM-27369/2023 | I | 593 | E | 13 | 20230329 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | I | 593 | stop | 6 | 20220928 |
| EPI_ISL_10924464 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11805/2022 | I | 593 | D | 2 | 20220228 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 593 | del | 407 | 20250116 |
| EPI_ISL_19466362 | NSP3 | hCoV-19/USA/NY-PRL-241001_81C07/2024 | I | 593 | M | 55 | 20240923 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | I | 593 | C | 5 | 20230217 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | I | 593 | T | 20 | 20230217 |
| EPI_ISL_17304869 | NSP3 | hCoV-19/USA/TX-HMH-M-127347/2023 | I | 593 | Y | 13 | 20230318 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | I | 593 | P | 1 | 20210401 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | I | 593 | F | 6 | 20221121 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | I | 593 | W | 2 | 20210915 |
| EPI_ISL_17821641 | NSP3 | hCoV-19/Brazil/RS-LMM74536/2023 | I | 593 | A | 15 | 20230427 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | I | 593 | S | 6 | 20230605 |
| EPI_ISL_10080743 | NSP3 | hCoV-19/India/KA-SEQ_9767_S179_R1_001/2022 | Q | 594 | W | 1 | 20220102 |
| EPI_ISL_17084213 | NSP3 | hCoV-19/Chile/AR-12606/2023 | Q | 594 | A | 5 | 20230215 |
| EPI_ISL_18050846 | NSP3 | hCoV-19/Israel/ICH-741198321/2023 | Q | 594 | E | 191 | 20230718 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | Q | 594 | S | 8 | 20230217 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | Q | 594 | insYstopNT | 1 | 20221122 |
| EPI_ISL_17658711 | NSP3 | hCoV-19/Italy/LOM-ASST-69365866/2023 | Q | 594 | Y | 3 | 20230510 |
| EPI_ISL_19259363 | NSP3 | hCoV-19/Mexico/CMX-INER-INMEGEN-3012/2024 | Q | 594 | L | 45 | 20240519 |
| EPI_ISL_19348703 | NSP3 | hCoV-19/Morocco/29/2020 | Q | 594 | D | 1 | 20200909 |
| EPI_ISL_19549216 | NSP3 | hCoV-19/Canada/AB-ABPHL-126731/2024 | Q | 594 | R | 252 | 20241104 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | Q | 594 | N | 4 | 20220823 |
| EPI_ISL_17588334 | NSP3 | hCoV-19/USA/TX-HMH-M-128201/2023 | Q | 594 | T | 40 | 20230410 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | Q | 594 | stop | 15 | 20221228 |
| EPI_ISL_14028352 | NSP3 | hCoV-19/USA/TX-HMH-M-107015/2022 | Q | 594 | Z | 1 | 20220714 |
| EPI_ISL_19618260 | NSP3 | hCoV-19/USA/WI-WSLH-2402440/2024 | Q | 594 | K | 72 | 20240913 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Q | 594 | del | 397 | 20250116 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | Q | 594 | P | 9 | 20230605 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | Q | 594 | G | 2 | 20230404 |
| EPI_ISL_19719234 | NSP3 | hCoV-19/Italy/VEN-ULSS8-7772961_VI/2025 | Q | 594 | H | 423 | 20250125 |
| EPI_ISL_2956580 | NSP3 | hCoV-19/Germany/BW-RKI-I-186644/2021 | Q | 594 | V | 3 | 20210620 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | Q | 594 | I | 30 | 20240716 |
| EPI_ISL_14881060 | NSP3 | hCoV-19/USA/ID-IBL-846235/2022 | Q | 594 | M | 3 | 20220816 |
| EPI_ISL_19803710 | NSP3 | hCoV-19/USA/WI-WSLH-2500559/2025 | E | 595 | K | 289 | 20250124 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | E | 595 | F | 1 | 20230116 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | E | 595 | C | 1 | 20210802 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | E | 595 | Y | 1 | 20210401 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | E | 595 | T | 7 | 20231020 |
| EPI_ISL_19078791 | NSP3 | hCoV-19/Brazil/RS-LGBM-HMV-02-0484-F/2024 | E | 595 | A | 165 | 20240229 |
| EPI_ISL_19530267 | NSP3 | hCoV-19/USA/RI-RISHL-2402086/2024 | E | 595 | V | 167 | 20241010 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | E | 595 | M | 32 | 20240716 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | E | 595 | L | 6 | 20230217 |
| EPI_ISL_12174847 | NSP3 | hCoV-19/USA/NY-PBRI-C22A020/2022 | E | 595 | N | 5 | 20220411 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | E | 595 | del | 409 | 20230815 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | E | 595 | insVWLI | 2 | 20210801 |
| EPI_ISL_17270414 | NSP3 | hCoV-19/Chile/RM-20742/2023 | E | 595 | insEEXX | 4 | 20230307 |
| EPI_ISL_17201584 | NSP3 | hCoV-19/Chile/RM-19691/2023 | E | 595 | insIL | 14 | 20230306 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | E | 595 | S | 5 | 20220825 |
| EPI_ISL_19824315 | NSP3 | hCoV-19/South Korea/KDCA297308/2025 | E | 595 | G | 186 | 20250317 |
| EPI_ISL_19758521 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10492/2025 | E | 595 | D | 6005 | 20250131 |
| EPI_ISL_17084213 | NSP3 | hCoV-19/Chile/AR-12606/2023 | E | 595 | H | 8 | 20230215 |
| EPI_ISL_16867239 | NSP3 | hCoV-19/England/BRBR-326BC6E4/2023 | E | 595 | Z | 10 | 20230201 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | E | 595 | Q | 14 | 20221011 |
| EPI_ISL_15116695 | NSP3 | hCoV-19/Chile/MA-107961/2022 | E | 595 | W | 2 | 20220829 |
| EPI_ISL_16684905 | NSP3 | hCoV-19/USA/OR-OHSU-223610304/2022 | E | 595 | stop | 7 | 20221209 |
| EPI_ISL_17588334 | NSP3 | hCoV-19/USA/TX-HMH-M-128201/2023 | E | 595 | R | 49 | 20230410 |
| EPI_ISL_5674179 | NSP3 | hCoV-19/Germany/BW-RKI-I-294352/2021 | E | 595 | I | 3 | 20210930 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | G | 596 | Y | 1 | 20210319 |
| EPI_ISL_19443562 | NSP3 | hCoV-19/South Korea/KDCA295661/2024 | G | 596 | V | 14 | 20240903 |
| EPI_ISL_18648202 | NSP3 | hCoV-19/USA/MS-MSPHL-0903/2023 | G | 596 | D | 8 | 20231211 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | G | 596 | del | 310 | 20240716 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | G | 596 | insCstopI | 1 | 20220117 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | G | 596 | A | 22 | 20250116 |
| EPI_ISL_16346340 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00016826_01/2022 | G | 596 | S | 17 | 20221117 |
| EPI_ISL_18980973 | NSP3 | hCoV-19/USA/TX-HMH-M-140090/2024 | G | 596 | insRLIM | 1 | 20240227 |
| EPI_ISL_16124120 | NSP3 | hCoV-19/USA/DE-DHSS-B1115674/2021 | G | 596 | insGLIM | 1 | 20210809 |
| EPI_ISL_12291393 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1127/2022 | G | 596 | P | 2 | 20220119 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | G | 596 | I | 1 | 20220804 |
| EPI_ISL_16356341 | NSP3 | hCoV-19/England/LSPA-32641101/2022 | G | 596 | insWLIM | 3 | 20221221 |
| EPI_ISL_17560573 | NSP3 | hCoV-19/USA/NJ-GBW-H20-317-4389/2023 | G | 596 | C | 41 | 20230417 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | G | 596 | insY | 1 | 20210918 |
| EPI_ISL_19499784 | NSP3 | hCoV-19/USA/TX-HMH-M-146603/2024 | G | 596 | R | 14 | 20241001 |
| EPI_ISL_15116695 | NSP3 | hCoV-19/Chile/MA-107961/2022 | G | 596 | N | 4 | 20220829 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | G | 596 | K | 7 | 20230116 |
| EPI_ISL_17372556 | NSP3 | hCoV-19/India/TN-SPHL-2839/2023 | G | 596 | H | 2 | 20230303 |
| EPI_ISL_17494432 | NSP3 | hCoV-19/Shaanxi/SCDC-0010/2023 | G | 596 | insXXXIM | 1 | 20230128 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | G | 596 | W | 4 | 20220117 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | G | 596 | insCGLIM | 1 | 20210805 |
| EPI_ISL_14333795 | NSP3 | hCoV-19/USA/ID-IBL-839632/2022 | G | 596 | E | 2 | 20220725 |
| EPI_ISL_14818422 | NSP3 | hCoV-19/Chile/MA-105817/2022 | G | 596 | T | 4 | 20220822 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | G | 596 | stop | 4 | 20220823 |
| EPI_ISL_4042507 | NSP3 | hCoV-19/Germany/BW-RKI-I-223092/2021 | G | 596 | Q | 2 | 20210804 |
| EPI_ISL_17466554 | NSP3 | hCoV-19/Chile/RM-27489/2023 | G | 596 | M | 10 | 20230330 |
| EPI_ISL_19463891 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4010461/2024 | V | 597 | A | 48 | 20240929 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 597 | I | 25 | 20230217 |
| EPI_ISL_17304869 | NSP3 | hCoV-19/USA/TX-HMH-M-127347/2023 | V | 597 | W | 5 | 20230318 |
| EPI_ISL_16112090 | NSP3 | hCoV-19/Brazil/GO-LACENGO-520340484/2022 | V | 597 | Q | 2 | 20220624 |
| EPI_ISL_19706711 | NSP3 | hCoV-19/Italy/UMB-LAOP-167-4-10/2025 | V | 597 | L | 296 | 20250122 |
| EPI_ISL_13829382 | NSP3 | hCoV-19/USA/ID-IBL-832972/2022 | V | 597 | Y | 1 | 20220629 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | V | 597 | C | 23 | 20230403 |
| EPI_ISL_18669906 | NSP3 | hCoV-19/Honduras/CR-121/2023 | V | 597 | del | 273 | 20230810 |
| EPI_ISL_2111434 | NSP3 | hCoV-19/Germany/un-RKI-I-127281/2021 | V | 597 | P | 1 | 20210421 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | V | 597 | insSISAC | 1 | 20230116 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | V | 597 | T | 144 | 20230815 |
| EPI_ISL_14224102 | NSP3 | hCoV-19/USA/ID-IBL-835609/2022 | V | 597 | stop | 4 | 20220708 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | V | 597 | N | 5 | 20221121 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | V | 597 | S | 5 | 20220804 |
| EPI_ISL_17084213 | NSP3 | hCoV-19/Chile/AR-12606/2023 | V | 597 | E | 12 | 20230215 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | V | 597 | R | 1 | 20230116 |
| EPI_ISL_19663992 | NSP3 | hCoV-19/Norway/9683/2024 | V | 597 | M | 908 | 20241210 |
| EPI_ISL_4225300 | NSP3 | hCoV-19/Germany/BW-RKI-I-230354/2021 | V | 597 | D | 2 | 20210827 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | V | 597 | insG | 1 | 20210806 |
| EPI_ISL_15416650 | NSP3 | hCoV-19/USA/ID-IBL-855862/2022 | V | 597 | G | 6 | 20220922 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | V | 597 | F | 1 | 20210401 |
| EPI_ISL_4042507 | NSP3 | hCoV-19/Germany/BW-RKI-I-223092/2021 | V | 597 | K | 1 | 20210804 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 597 | insEF | 3 | 20230217 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | V | 598 | L | 93 | 20240716 |
| EPI_ISL_19035162 | NSP3 | hCoV-19/France/GES-IPP04833/2024 | V | 598 | C | 10 | 20240318 |
| EPI_ISL_18669906 | NSP3 | hCoV-19/Honduras/CR-121/2023 | V | 598 | del | 273 | 20230810 |
| EPI_ISL_19534296 | NSP3 | hCoV-19/Italy/VEN-ULSS8-7675481_VI/2024 | V | 598 | F | 93 | 20241009 |
| EPI_ISL_5674169 | NSP3 | hCoV-19/Germany/BW-RKI-I-294348/2021 | V | 598 | Y | 2 | 20210919 |
| EPI_ISL_6125400 | NSP3 | hCoV-19/Japan/20210815-33422/2021 | V | 598 | insCstopILLLHQstop | 1 | 20210815 |
| EPI_ISL_14333186 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-95602/2022 | V | 598 | N | 6 | 20220722 |
| EPI_ISL_15416650 | NSP3 | hCoV-19/USA/ID-IBL-855862/2022 | V | 598 | stop | 4 | 20220922 |
| EPI_ISL_15116695 | NSP3 | hCoV-19/Chile/MA-107961/2022 | V | 598 | R | 1 | 20220829 |
| EPI_ISL_16414022 | NSP3 | hCoV-19/Chile/VS-139427/2022 | V | 598 | E | 2 | 20221222 |
| EPI_ISL_19539586 | NSP3 | hCoV-19/USA/TX-PHH-24V-278G0147/2024 | V | 598 | I | 401 | 20241004 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | V | 598 | P | 1 | 20210804 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | V | 598 | T | 8 | 20230605 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | V | 598 | G | 24 | 20230403 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | V | 598 | Q | 2 | 20220804 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | V | 598 | K | 1 | 20211109 |
| EPI_ISL_19296840 | NSP3 | hCoV-19/env/Ukraine/85573/2024 | V | 598 | A | 31 | 20240325 |
| EPI_ISL_8194881 | NSP3 | hCoV-19/Egypt/NRC-6351/2020 | V | 598 | insstopLWCstopILLLHQstop | 1 | 20200726 |
| EPI_ISL_12320498 | NSP3 | hCoV-19/Turkey/HSGM-GS2152/2022 | V | 598 | S | 5 | 20220401 |
| EPI_ISL_17530347 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13893/2023 | V | 598 | W | 3 | 20230403 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 598 | M | 5 | 20250116 |
| EPI_ISL_17821639 | NSP3 | hCoV-19/Brazil/RS-LMM74539/2023 | V | 598 | D | 6 | 20230427 |
| EPI_ISL_10992349 | NSP3 | hCoV-19/England/BRBR-398A3D6/2022 | D | 599 | B | 6 | 20220306 |
| EPI_ISL_19707218 | NSP3 | hCoV-19/Canada/ON-KHS-00291-v1/2025 | D | 599 | E | 88 | 20250114 |
| EPI_ISL_17466554 | NSP3 | hCoV-19/Chile/RM-27489/2023 | D | 599 | H | 8 | 20230330 |
| EPI_ISL_11793534 | NSP3 | hCoV-19/India/KA-SEQ_14393_S254_R1_001/2022 | D | 599 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVD | 1 | 20220202 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | D | 599 | M | 1 | 20210809 |
| EPI_ISL_17304869 | NSP3 | hCoV-19/USA/TX-HMH-M-127347/2023 | D | 599 | I | 9 | 20230318 |
| EPI_ISL_15416650 | NSP3 | hCoV-19/USA/ID-IBL-855862/2022 | D | 599 | L | 5 | 20220922 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | D | 599 | S | 150 | 20230815 |
| EPI_ISL_19452891 | NSP3 | hCoV-19/USA/VA-DCLS-16424/2024 | D | 599 | V | 13 | 20240714 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | D | 599 | A | 23 | 20230605 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | D | 599 | K | 4 | 20230217 |
| EPI_ISL_18823337 | NSP3 | hCoV-19/South Korea/KDCA282533/2023 | D | 599 | G | 20 | 20231226 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | D | 599 | stop | 18 | 20230403 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | D | 599 | Y | 6 | 20250116 |
| EPI_ISL_18512327 | NSP3 | hCoV-19/USA/IL-RIPHL_21371_G/2023 | D | 599 | N | 192 | 20230920 |
| EPI_ISL_18669906 | NSP3 | hCoV-19/Honduras/CR-121/2023 | D | 599 | del | 250 | 20230810 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | D | 599 | T | 3 | 20231020 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | Y | 600 | W | 148 | 20230815 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | Y | 600 | V | 1 | 20210809 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | Y | 600 | I | 7 | 20221011 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | Y | 600 | K | 2 | 20220519 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | Y | 600 | del | 263 | 20240716 |
| EPI_ISL_16902963 | NSP3 | hCoV-19/England/PLYM-326C0F6A/2023 | Y | 600 | D | 9 | 20230206 |
| EPI_ISL_19833055 | NSP3 | hCoV-19/France/ARA-RELAB-HCL725000043801/2025 | Y | 600 | C | 629 | 20250324 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | Y | 600 | N | 33 | 20220825 |
| EPI_ISL_19680389 | NSP3 | hCoV-19/Japan/TKYnat18260/2024 | Y | 600 | F | 46 | 20241226 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | Y | 600 | L | 19 | 20230403 |
| EPI_ISL_17953316 | NSP3 | hCoV-19/Thailand/NIC_NBI_6441/2023 | Y | 600 | S | 9 | 20230611 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | Y | 600 | E | 2 | 20231020 |
| EPI_ISL_15927871 | NSP3 | hCoV-19/Turkey/KSS-KEAH4881785964/2022 | Y | 600 | stop | 6 | 20221107 |
| EPI_ISL_17821639 | NSP3 | hCoV-19/Brazil/RS-LMM74539/2023 | Y | 600 | A | 6 | 20230427 |
| EPI_ISL_19832213 | NSP3 | hCoV-19/USA/MI-UM-10062553747/2025 | Y | 600 | H | 898 | 20250224 |
| EPI_ISL_10753318 | NSP3 | hCoV-19/India/KA-SEQ_13553_S38_R1_001/2022 | Y | 600 | G | 2 | 20220203 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 600 | R | 3 | 20230217 |
| EPI_ISL_13815040 | NSP3 | hCoV-19/USA/WA-CDC-UW22062293190/2022 | Y | 600 | insstop | 5 | 20220622 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 600 | M | 14 | 20250116 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | G | 601 | P | 5 | 20221011 |
| EPI_ISL_12146245 | NSP3 | hCoV-19/Turkey/HSGM-GS1608/2022 | G | 601 | K | 1 | 20220401 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | G | 601 | C | 94 | 20230404 |
| EPI_ISL_19349398 | NSP3 | hCoV-19/USA/TX-HMH-M-143988/2024 | G | 601 | D | 26 | 20240729 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | G | 601 | H | 1 | 20220825 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | G | 601 | Q | 1 | 20220117 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | G | 601 | del | 338 | 20240716 |
| EPI_ISL_16365048 | NSP3 | hCoV-19/Chile/MA-134795/2022 | G | 601 | A | 5 | 20221202 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | G | 601 | insstopLstop | 1 | 20200729 |
| EPI_ISL_18898498 | NSP3 | hCoV-19/Chile/LR-1357/2024 | G | 601 | V | 111 | 20240102 |
| EPI_ISL_18771587 | NSP3 | hCoV-19/Thailand/NIC_TRG_8409/2023 | G | 601 | F | 1 | 20231117 |
| EPI_ISL_13080932 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-1985/2022 | G | 601 | stop | 5 | 20220520 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | G | 601 | N | 96 | 20230815 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | G | 601 | insRLN | 1 | 20230116 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | G | 601 | T | 17 | 20231020 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | G | 601 | insKEE | 5 | 20221011 |
| EPI_ISL_15116695 | NSP3 | hCoV-19/Chile/MA-107961/2022 | G | 601 | L | 4 | 20220829 |
| EPI_ISL_15528561 | NSP3 | hCoV-19/Mexico/CMX_InDRE_FB22053_E09319336959_S15330/2022 | G | 601 | R | 8 | 20220921 |
| EPI_ISL_17466554 | NSP3 | hCoV-19/Chile/RM-27489/2023 | G | 601 | E | 6 | 20230330 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | G | 601 | M | 3 | 20211109 |
| EPI_ISL_12953126 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-MO02502663/2022 | G | 601 | I | 1 | 20220504 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | G | 601 | W | 20 | 20230403 |
| EPI_ISL_17517061 | NSP3 | hCoV-19/Poland/WSSEGorzow-23S0245/2023 | G | 601 | S | 28 | 20230403 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | A | 602 | Q | 2 | 20210809 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | A | 602 | C | 25 | 20230403 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | A | 602 | Y | 1 | 20220804 |
| EPI_ISL_18771587 | NSP3 | hCoV-19/Thailand/NIC_TRG_8409/2023 | A | 602 | K | 6 | 20231117 |
| EPI_ISL_19784416 | NSP3 | hCoV-19/New Zealand/25YA0680/2025 | A | 602 | V | 2275 | 20250303 |
| EPI_ISL_11793519 | NSP3 | hCoV-19/India/KA-SEQ_14369_S230_R1_001/2022 | A | 602 | H | 1 | 20220219 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | A | 602 | E | 9 | 20231020 |
| EPI_ISL_18743494 | NSP3 | hCoV-19/USA/TX-HMH-M-136560/2023 | A | 602 | L | 106 | 20231220 |
| EPI_ISL_19823500 | NSP3 | hCoV-19/Italy/LAZ-IFO-2504013049/2025 | A | 602 | S | 179 | 20250306 |
| EPI_ISL_11150320 | NSP3 | hCoV-19/England/NEWC-3A5187E/2022 | A | 602 | P | 34 | 20220311 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | A | 602 | stop | 1 | 20220117 |
| EPI_ISL_18422771 | NSP3 | hCoV-19/France/PAC-HCL723001034901/2023 | A | 602 | G | 7 | 20230828 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | A | 602 | D | 15 | 20230217 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | A | 602 | del | 294 | 20240716 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | A | 602 | W | 1 | 20210802 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | A | 602 | I | 2 | 20230116 |
| EPI_ISL_10729462 | NSP3 | hCoV-19/India/KA-SEQ_12793_S8_R1_001/2022 | A | 602 | F | 2 | 20220210 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 602 | T | 255 | 20250116 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | R | 603 | L | 6 | 20250116 |
| EPI_ISL_17821656 | NSP3 | hCoV-19/Brazil/RS-LMM74501/2023 | R | 603 | V | 5 | 20230426 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | R | 603 | P | 1 | 20210806 |
| EPI_ISL_19619825 | NSP3 | hCoV-19/USA/TX-PHH-24C-168M0090/2024 | R | 603 | D | 51 | 20240616 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | R | 603 | insQstopNNCSV | 4 | 20221213 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | R | 603 | M | 2 | 20220519 |
| EPI_ISL_17372556 | NSP3 | hCoV-19/India/TN-SPHL-2839/2023 | R | 603 | C | 2 | 20230303 |
| EPI_ISL_17247201 | NSP3 | hCoV-19/Slovenia/8052/2023 | R | 603 | I | 12 | 20230222 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | R | 603 | insGCGstopLWCstopI | 1 | 20210917 |
| EPI_ISL_18287769 | NSP3 | hCoV-19/France/IDF-AphpSA-882305093166/2023 | R | 603 | A | 48 | 20230529 |
| EPI_ISL_14534488 | NSP3 | hCoV-19/Chile/RM-95805/2022 | R | 603 | S | 8 | 20220804 |
| EPI_ISL_17821639 | NSP3 | hCoV-19/Brazil/RS-LMM74539/2023 | R | 603 | G | 17 | 20230427 |
| EPI_ISL_19755391 | NSP3 | hCoV-19/Brazil/ES-LACENES-321700893/2025 | R | 603 | K | 4693 | 20250102 |
| EPI_ISL_17466548 | NSP3 | hCoV-19/Chile/RM-27468/2023 | R | 603 | H | 11 | 20230401 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | R | 603 | Q | 1 | 20210802 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | R | 603 | E | 5 | 20231020 |
| EPI_ISL_15908869 | NSP3 | hCoV-19/Mauritius/50836/2022 | R | 603 | N | 9 | 20220912 |
| EPI_ISL_17517061 | NSP3 | hCoV-19/Poland/WSSEGorzow-23S0245/2023 | R | 603 | T | 5 | 20230403 |
| EPI_ISL_17546507 | NSP3 | hCoV-19/USA/ID-IBL-881137/2023 | R | 603 | stop | 31 | 20230403 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | R | 603 | del | 296 | 20240716 |
| EPI_ISL_12999183 | NSP3 | hCoV-19/Chile/TA-62523/2022 | R | 603 | insE | 1 | 20220518 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | R | 603 | insLD | 1 | 20210918 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | F | 604 | R | 1 | 20230404 |
| EPI_ISL_17466548 | NSP3 | hCoV-19/Chile/RM-27468/2023 | F | 604 | A | 4 | 20230401 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | F | 604 | T | 7 | 20230116 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | F | 604 | insXXXXXXXXXXX | 1 | 20210807 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | F | 604 | insL | 1 | 20210812 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | F | 604 | P | 5 | 20221011 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | F | 604 | S | 16 | 20250116 |
| EPI_ISL_11022653 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-14883/2022 | F | 604 | stop | 3 | 20220302 |
| EPI_ISL_19015234 | NSP3 | hCoV-19/USA/IL-C24WGS415/2024 | F | 604 | del | 344 | 20240226 |
| EPI_ISL_17517061 | NSP3 | hCoV-19/Poland/WSSEGorzow-23S0245/2023 | F | 604 | Y | 9 | 20230403 |
| EPI_ISL_18565076 | NSP3 | hCoV-19/South Korea/KDCA274552/2023 | F | 604 | L | 51 | 20231031 |
| EPI_ISL_18845521 | NSP3 | hCoV-19/Russia/SPE-RII-8978S/2023 | F | 604 | I | 36 | 20231226 |
| EPI_ISL_10753318 | NSP3 | hCoV-19/India/KA-SEQ_13553_S38_R1_001/2022 | F | 604 | N | 2 | 20220203 |
| EPI_ISL_17058856 | NSP3 | hCoV-19/USA/MA-NEIDL-07458/2022 | F | 604 | insR | 1 | 20221011 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | F | 604 | K | 1 | 20210319 |
| EPI_ISL_14313277 | NSP3 | hCoV-19/USA/TX-HMH-M-110174/2022 | F | 604 | D | 3 | 20220731 |
| EPI_ISL_18771587 | NSP3 | hCoV-19/Thailand/NIC_TRG_8409/2023 | F | 604 | G | 5 | 20231117 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | F | 604 | C | 5 | 20241113 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | F | 604 | V | 16 | 20230217 |
| EPI_ISL_17526108 | NSP3 | hCoV-19/Chile/VS-30743/2023 | F | 604 | E | 31 | 20230410 |
| EPI_ISL_10080710 | NSP3 | hCoV-19/India/KA-SEQ_9949_S127_R1_001/2022 | F | 604 | Q | 1 | 20220101 |
| EPI_ISL_10753318 | NSP3 | hCoV-19/India/KA-SEQ_13553_S38_R1_001/2022 | Y | 605 | G | 2 | 20220203 |
| EPI_ISL_18819530 | NSP3 | hCoV-19/Japan/PG-572225/2023 | Y | 605 | F | 272 | 20230911 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | Y | 605 | T | 86 | 20240716 |
| EPI_ISL_5298214 | NSP3 | hCoV-19/Australia/VIC16775/2020 | Y | 605 | insQstopNNC | 1 | 20200810 |
| EPI_ISL_17740932 | NSP3 | hCoV-19/South Korea/KDCA238952/2023 | Y | 605 | C | 26 | 20230510 |
| EPI_ISL_18269042 | NSP3 | hCoV-19/USA/MS-MSPHL-0571/2023 | Y | 605 | D | 2 | 20230816 |
| EPI_ISL_19259779 | NSP3 | hCoV-19/USA/OR-BBI-S25447/2024 | Y | 605 | del | 364 | 20240313 |
| EPI_ISL_18365021 | NSP3 | hCoV-19/Czech Republic/UMTM255807/2021 | Y | 605 | Q | 2 | 20210826 |
| EPI_ISL_13306868 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3943/2022 | Y | 605 | I | 3 | 20220517 |
| EPI_ISL_18782895 | NSP3 | hCoV-19/env/Ukraine/83688/2023 | Y | 605 | stop | 17 | 20231120 |
| EPI_ISL_18771587 | NSP3 | hCoV-19/Thailand/NIC_TRG_8409/2023 | Y | 605 | A | 1 | 20231117 |
| EPI_ISL_19613693 | NSP3 | hCoV-19/Honduras/AT-326/2024 | Y | 605 | N | 34 | 20240816 |
| EPI_ISL_17708795 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200387519N2/2022 | Y | 605 | insXX | 1 | 20220407 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | Y | 605 | L | 56 | 20230404 |
| EPI_ISL_16829867 | NSP3 | hCoV-19/Scotland/SCOT-24482/2023 | Y | 605 | H | 23 | 20230108 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 605 | V | 9 | 20230217 |
| EPI_ISL_17526108 | NSP3 | hCoV-19/Chile/VS-30743/2023 | Y | 605 | M | 29 | 20230410 |
| EPI_ISL_17466548 | NSP3 | hCoV-19/Chile/RM-27468/2023 | Y | 605 | E | 5 | 20230401 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | Y | 605 | S | 4 | 20231020 |
| EPI_ISL_12658787 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-120121-1263/2021 | Y | 605 | W | 2 | 20211201 |
| EPI_ISL_14716356 | NSP3 | hCoV-19/USA/OH-057560/2021 | Y | 605 | R | 1 | 20210426 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | F | 606 | A | 2 | 20231020 |
| EPI_ISL_19613693 | NSP3 | hCoV-19/Honduras/AT-326/2024 | F | 606 | Y | 12 | 20240816 |
| EPI_ISL_18287769 | NSP3 | hCoV-19/France/IDF-AphpSA-882305093166/2023 | F | 606 | I | 58 | 20230529 |
| EPI_ISL_13723229 | NSP3 | hCoV-19/Chile/RM-70011/2022 | F | 606 | W | 2 | 20220605 |
| EPI_ISL_19380206 | NSP3 | hCoV-19/USA/MS-MSPHL-0298/2024 | F | 606 | L | 147 | 20240801 |
| EPI_ISL_14567214 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS-79280/2022 | F | 606 | C | 5 | 20220628 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | F | 606 | T | 13 | 20230217 |
| EPI_ISL_18771587 | NSP3 | hCoV-19/Thailand/NIC_TRG_8409/2023 | F | 606 | K | 4 | 20231117 |
| EPI_ISL_17299896 | NSP3 | hCoV-19/Chile/VS-23513/2023 | F | 606 | insXXXXXXXXXXXXXR | 1 | 20230319 |
| EPI_ISL_7547077 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081721-1058/2021 | F | 606 | insstopLWCstopILLLHQstopNNCS | 1 | 20210817 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | F | 606 | N | 6 | 20221121 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | F | 606 | E | 4 | 20250116 |
| EPI_ISL_19015234 | NSP3 | hCoV-19/USA/IL-C24WGS415/2024 | F | 606 | del | 371 | 20240226 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | F | 606 | Q | 10 | 20221213 |
| EPI_ISL_16271570 | NSP3 | hCoV-19/USA/TX-HMH-M-120240/2022 | F | 606 | V | 12 | 20221214 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | F | 606 | R | 2 | 20210401 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | F | 606 | M | 4 | 20230404 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | F | 606 | G | 8 | 20220726 |
| EPI_ISL_18897803 | NSP3 | hCoV-19/USA/CA-SEARCH-138106/2023 | F | 606 | S | 18 | 20230925 |
| EPI_ISL_18146473 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48021/2023 | F | 606 | stop | 20 | 20230816 |
| EPI_ISL_17624525 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200356039N2/2022 | F | 606 | H | 2 | 20220210 |
| EPI_ISL_17526108 | NSP3 | hCoV-19/Chile/VS-30743/2023 | Y | 607 | A | 25 | 20230410 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | Y | 607 | H | 64 | 20240710 |
| EPI_ISL_16743078 | NSP3 | hCoV-19/Chile/AR-521/2022 | Y | 607 | W | 2 | 20221229 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | Y | 607 | P | 5 | 20230217 |
| EPI_ISL_12947356 | NSP3 | hCoV-19/Japan/PG-231785/2022 | Y | 607 | M | 1 | 20220324 |
| EPI_ISL_13847260 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2830/2022 | Y | 607 | S | 5 | 20220623 |
| EPI_ISL_18771587 | NSP3 | hCoV-19/Thailand/NIC_TRG_8409/2023 | Y | 607 | L | 11 | 20231117 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | Y | 607 | insstopKGstopWHYstopNASES | 1 | 20230217 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | Y | 607 | V | 9 | 20221121 |
| EPI_ISL_18263901 | NSP3 | hCoV-19/Georgia/Tb-s7939/2023 | Y | 607 | C | 8 | 20230830 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | Y | 607 | T | 22 | 20240716 |
| EPI_ISL_17516985 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2024/2023 | Y | 607 | F | 15 | 20230324 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 607 | Q | 2 | 20250116 |
| EPI_ISL_17953316 | NSP3 | hCoV-19/Thailand/NIC_NBI_6441/2023 | Y | 607 | stop | 7 | 20230611 |
| EPI_ISL_18233653 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48066/2023 | Y | 607 | N | 16 | 20230809 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | Y | 607 | K | 1 | 20210319 |
| EPI_ISL_12268040 | NSP3 | hCoV-19/France/ARA-HMN-22032300088/2022 | Y | 607 | D | 5 | 20220307 |
| EPI_ISL_19192499 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16034/2024 | Y | 607 | del | 421 | 20240322 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | Y | 607 | R | 3 | 20230404 |
| EPI_ISL_18454288 | NSP3 | hCoV-19/Thailand/NIC_BKK_8175/2023 | Y | 607 | insXXXX | 1 | 20231019 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | Y | 607 | I | 1 | 20210114 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | T | 608 | stop | 6 | 20220726 |
| EPI_ISL_19192499 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16034/2024 | T | 608 | del | 392 | 20240322 |
| EPI_ISL_18226333 | NSP3 | hCoV-19/env/India/MH-FMR_D2-50b/2023 | T | 608 | Q | 5 | 20230222 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 608 | C | 2 | 20230404 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | T | 608 | insAYL | 1 | 20231020 |
| EPI_ISL_18771587 | NSP3 | hCoV-19/Thailand/NIC_TRG_8409/2023 | T | 608 | L | 4 | 20231117 |
| EPI_ISL_12947356 | NSP3 | hCoV-19/Japan/PG-231785/2022 | T | 608 | K | 3 | 20220324 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | T | 608 | E | 5 | 20221011 |
| EPI_ISL_19586806 | NSP3 | hCoV-19/Peru/CUS-NAMRU-01314/2024 | T | 608 | S | 53 | 20240715 |
| EPI_ISL_19558365 | NSP3 | hCoV-19/Sichuan/DYCDC-351/2024 | T | 608 | N | 252 | 20240806 |
| EPI_ISL_10748892 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC5586/2022 | T | 608 | insPSHPCVSP | 1 | 20220130 |
| EPI_ISL_17299896 | NSP3 | hCoV-19/Chile/VS-23513/2023 | T | 608 | M | 2 | 20230319 |
| EPI_ISL_17526108 | NSP3 | hCoV-19/Chile/VS-30743/2023 | T | 608 | H | 33 | 20230410 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | T | 608 | P | 20 | 20240716 |
| EPI_ISL_11022653 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-14883/2022 | T | 608 | Y | 4 | 20220302 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | T | 608 | R | 1 | 20221228 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 608 | F | 4 | 20250116 |
| EPI_ISL_15334471 | NSP3 | hCoV-19/Chile/LR-113456/2022 | T | 608 | A | 19 | 20220921 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | T | 608 | V | 6 | 20231020 |
| EPI_ISL_18968076 | NSP3 | hCoV-19/India/DL-DEC-MAMC-LNHD-22/2023 | T | 608 | I | 25 | 20231227 |
| EPI_ISL_19805101 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12729-P0/2025 | S | 609 | N | 382 | 20250308 |
| EPI_ISL_18716710 | NSP3 | hCoV-19/Spain/PV-HUD-79874131/2023 | S | 609 | G | 264 | 20231227 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 609 | K | 7 | 20250116 |
| EPI_ISL_18771587 | NSP3 | hCoV-19/Thailand/NIC_TRG_8409/2023 | S | 609 | H | 2 | 20231117 |
| EPI_ISL_19574006 | NSP3 | hCoV-19/Germany/BW-RKI-I-1146235/2024 | S | 609 | C | 176 | 20241029 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | S | 609 | E | 3 | 20230217 |
| EPI_ISL_5085298 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-44904/2020 | S | 609 | insstopIstopGYstop | 1 | 20200724 |
| EPI_ISL_10530692 | NSP3 | hCoV-19/Scotland/QEUH-37E09ED/2022 | S | 609 | Y | 5 | 20220221 |
| EPI_ISL_19280164 | NSP3 | hCoV-19/USA/VA-GBW-GKISBBBD63027/2024 | S | 609 | I | 283 | 20240711 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | S | 609 | D | 1 | 20220818 |
| EPI_ISL_19589625 | NSP3 | hCoV-19/Philippines/PH-RITM-4739/2024 | S | 609 | T | 32 | 20241009 |
| EPI_ISL_17526108 | NSP3 | hCoV-19/Chile/VS-30743/2023 | S | 609 | A | 29 | 20230410 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | S | 609 | Q | 11 | 20220725 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | S | 609 | insstopIstopGstopstop | 1 | 20211122 |
| EPI_ISL_19719097 | NSP3 | hCoV-19/env/Germany/BY-LGL-6454140/2025 | S | 609 | R | 43 | 20250129 |
| EPI_ISL_18226333 | NSP3 | hCoV-19/env/India/MH-FMR_D2-50b/2023 | S | 609 | stop | 14 | 20230222 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | S | 609 | L | 7 | 20230404 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | S | 609 | P | 12 | 20231020 |
| EPI_ISL_19192499 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16034/2024 | S | 609 | del | 375 | 20240322 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | S | 609 | V | 22 | 20240716 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | S | 609 | F | 1 | 20210401 |
| EPI_ISL_11022653 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-14883/2022 | K | 610 | A | 1 | 20220302 |
| EPI_ISL_13812287 | NSP3 | hCoV-19/USA/ID-IBL-831853/2022 | K | 610 | insstop | 1 | 20220606 |
| EPI_ISL_18454291 | NSP3 | hCoV-19/Thailand/NIC_SKA_8190/2023 | K | 610 | stop | 14 | 20231020 |
| EPI_ISL_18751099 | NSP3 | hCoV-19/Peru/CAL-INS-47601/2023 | K | 610 | I | 4 | 20231218 |
| EPI_ISL_19822765 | NSP3 | hCoV-19/Finland/THL-02355/2025 | K | 610 | R | 4166 | 20250303 |
| EPI_ISL_15792214 | NSP3 | hCoV-19/Chile/MA-122461/2022 | K | 610 | H | 3 | 20221017 |
| EPI_ISL_15792390 | NSP3 | hCoV-19/Chile/AR-123657/2022 | K | 610 | M | 2 | 20221026 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 610 | Q | 16 | 20230116 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 610 | P | 1 | 20210318 |
| EPI_ISL_15416622 | NSP3 | hCoV-19/USA/ID-IBL-854842/2022 | K | 610 | V | 15 | 20220912 |
| EPI_ISL_19192499 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16034/2024 | K | 610 | del | 365 | 20240322 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | K | 610 | F | 13 | 20230401 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | K | 610 | insYMALKYKR | 1 | 20210802 |
| EPI_ISL_18454275 | NSP3 | hCoV-19/Thailand/NIC_TRT_8082/2023 | K | 610 | S | 7 | 20231001 |
| EPI_ISL_13847260 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2830/2022 | K | 610 | Y | 1 | 20220623 |
| EPI_ISL_17711371 | NSP3 | hCoV-19/Thailand/NIC_NYK_2009/2023 | K | 610 | G | 1 | 20230428 |
| EPI_ISL_19749686 | NSP3 | hCoV-19/USA/WA-CDC-LC1132270/2025 | K | 610 | E | 1534 | 20250203 |
| EPI_ISL_19146201 | NSP3 | hCoV-19/Spain/AN-PMC-40037/2024 | K | 610 | N | 78 | 20240314 |
| EPI_ISL_18454288 | NSP3 | hCoV-19/Thailand/NIC_BKK_8175/2023 | K | 610 | C | 1 | 20231019 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | K | 610 | L | 1 | 20200729 |
| EPI_ISL_16743827 | NSP3 | hCoV-19/USA/VA-FBCH-5773/2022 | K | 610 | T | 17 | 20221216 |
| EPI_ISL_10530692 | NSP3 | hCoV-19/Scotland/QEUH-37E09ED/2022 | T | 611 | H | 5 | 20220221 |
| EPI_ISL_15693030 | NSP3 | hCoV-19/USA/ID-IBL-861490/2022 | T | 611 | N | 12 | 20221023 |
| EPI_ISL_19716354 | NSP3 | hCoV-19/USA/PA-CDC-LC1129401/2025 | T | 611 | A | 170 | 20250114 |
| EPI_ISL_18454275 | NSP3 | hCoV-19/Thailand/NIC_TRT_8082/2023 | T | 611 | Y | 1 | 20231001 |
| EPI_ISL_17711371 | NSP3 | hCoV-19/Thailand/NIC_NYK_2009/2023 | T | 611 | V | 24 | 20230428 |
| EPI_ISL_19015234 | NSP3 | hCoV-19/USA/IL-C24WGS415/2024 | T | 611 | del | 361 | 20240226 |
| EPI_ISL_19826019 | NSP3 | hCoV-19/Singapore/Y25R15MSC24/2025 | T | 611 | I | 10744 | 20250404 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | T | 611 | Q | 20 | 20240716 |
| EPI_ISL_18287773 | NSP3 | hCoV-19/France/IDF-AphpSA-882306038752/2023 | T | 611 | S | 17 | 20230611 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | T | 611 | insSG | 2 | 20230217 |
| EPI_ISL_18771587 | NSP3 | hCoV-19/Thailand/NIC_TRG_8409/2023 | T | 611 | P | 14 | 20231117 |
| EPI_ISL_18454288 | NSP3 | hCoV-19/Thailand/NIC_BKK_8175/2023 | T | 611 | C | 2 | 20231019 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | T | 611 | insNCSVTYQH | 1 | 20211012 |
| EPI_ISL_17236461 | NSP3 | hCoV-19/India/GJ-GBRC10316/2023 | T | 611 | insXXXXXXXXXXXXXXXX | 1 | 20230301 |
| EPI_ISL_17500166 | NSP3 | hCoV-19/Chile/RM-28900/2023 | T | 611 | E | 17 | 20230403 |
| EPI_ISL_19503148 | NSP3 | hCoV-19/USA/CA-CDPH-500142169/2024 | T | 611 | K | 683 | 20240823 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | T | 611 | insGG | 3 | 20210622 |
| EPI_ISL_16743827 | NSP3 | hCoV-19/USA/VA-FBCH-5773/2022 | T | 611 | D | 1 | 20221216 |
| EPI_ISL_17299896 | NSP3 | hCoV-19/Chile/VS-23513/2023 | T | 611 | L | 6 | 20230319 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | T | 611 | F | 2 | 20220825 |
| EPI_ISL_16724090 | NSP3 | hCoV-19/India/TN-CORES_41444/2022 | T | 611 | insXXXXX | 1 | 20220418 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | T | 611 | stop | 1 | 20221130 |
| EPI_ISL_18997771 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-0159/2024 | T | 611 | R | 16 | 20240207 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 611 | G | 1 | 20250116 |
| EPI_ISL_17201590 | NSP3 | hCoV-19/Chile/RM-18220/2023 | T | 611 | M | 8 | 20230301 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | T | 612 | L | 27 | 20240716 |
| EPI_ISL_9509901 | NSP3 | hCoV-19/Hong Kong/WHP5499-S6-iseq/2022 | T | 612 | V | 2 | 20220122 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 612 | del | 354 | 20250116 |
| EPI_ISL_19705637 | NSP3 | hCoV-19/USA/CO-CDPHE-42867773/2025 | T | 612 | A | 215 | 20250120 |
| EPI_ISL_17238823 | NSP3 | hCoV-19/Italy/CAM-90390374314_IZSM_COLLI_TIGEM/2023 | T | 612 | S | 32 | 20230223 |
| EPI_ISL_8806441 | NSP3 | hCoV-19/India/GA-NCCS-212250197/2021 | T | 612 | H | 1 | 20210813 |
| EPI_ISL_19666802 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09484/2024 | T | 612 | I | 251 | 20241213 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | T | 612 | C | 1 | 20210805 |
| EPI_ISL_19802230 | NSP3 | hCoV-19/Japan/FR046-0015/2025 | T | 612 | N | 347 | 20250228 |
| EPI_ISL_19499228 | NSP3 | hCoV-19/USA/TX-HMH-M-146653/2024 | T | 612 | P | 84 | 20241002 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | T | 612 | W | 1 | 20210802 |
| EPI_ISL_17299896 | NSP3 | hCoV-19/Chile/VS-23513/2023 | T | 612 | K | 12 | 20230319 |
| EPI_ISL_13829407 | NSP3 | hCoV-19/USA/ID-IBL-833867/2022 | T | 612 | D | 1 | 20220701 |
| EPI_ISL_15792214 | NSP3 | hCoV-19/Chile/MA-122461/2022 | T | 612 | E | 5 | 20221017 |
| EPI_ISL_18454288 | NSP3 | hCoV-19/Thailand/NIC_BKK_8175/2023 | T | 612 | R | 6 | 20231019 |
| EPI_ISL_18454283 | NSP3 | hCoV-19/Thailand/NIC_BKK_8134/2023 | T | 612 | F | 8 | 20231007 |
| EPI_ISL_17201501 | NSP3 | hCoV-19/Chile/RM-15130/2023 | T | 612 | M | 3 | 20230227 |
| EPI_ISL_10753299 | NSP3 | hCoV-19/India/KA-SEQ_13826_S310_R1_001/2022 | T | 612 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSLVQL | 1 | 20220202 |
| EPI_ISL_10080737 | NSP3 | hCoV-19/India/KA-SEQ_9674_S85_R1_001/2022 | T | 612 | stop | 1 | 20220102 |
| EPI_ISL_10729425 | NSP3 | hCoV-19/India/KA-SEQ_12742_S61_R1_001/2022 | T | 612 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT | 1 | 20220212 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | T | 612 | insEV | 1 | 20220225 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | T | 612 | G | 7 | 20220726 |
| EPI_ISL_12947356 | NSP3 | hCoV-19/Japan/PG-231785/2022 | T | 612 | Q | 6 | 20220324 |
| EPI_ISL_17821634 | NSP3 | hCoV-19/Brazil/RS-LMM74548/2023 | V | 613 | S | 5 | 20230501 |
| EPI_ISL_15792390 | NSP3 | hCoV-19/Chile/AR-123657/2022 | V | 613 | H | 1 | 20221026 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | V | 613 | R | 1 | 20210802 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 613 | del | 309 | 20250116 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 613 | G | 6 | 20220210 |
| EPI_ISL_19323981 | NSP3 | hCoV-19/USA/MS-MSPHL-0248/2024 | V | 613 | stop | 34 | 20240716 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | V | 613 | C | 14 | 20221121 |
| EPI_ISL_18454288 | NSP3 | hCoV-19/Thailand/NIC_BKK_8175/2023 | V | 613 | F | 4 | 20231019 |
| EPI_ISL_15116857 | NSP3 | hCoV-19/Chile/RM-109887/2022 | V | 613 | M | 2 | 20220909 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 613 | T | 12 | 20230217 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | V | 613 | W | 1 | 20200729 |
| EPI_ISL_19673505 | NSP3 | hCoV-19/USA/NY-NYULH-21865/2025 | V | 613 | L | 198 | 20250111 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | V | 613 | A | 74 | 20230925 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | V | 613 | Y | 1 | 20220818 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | V | 613 | N | 3 | 20230217 |
| EPI_ISL_7832674 | NSP3 | hCoV-19/USA/ID-IBL-775587/2021 | V | 613 | Q | 2 | 20211205 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | V | 613 | insEQRKQDDKKIK | 5 | 20221011 |
| EPI_ISL_19749804 | NSP3 | hCoV-19/USA/NY-CDC-LC1132765/2025 | V | 613 | I | 774 | 20250212 |
| EPI_ISL_18454283 | NSP3 | hCoV-19/Thailand/NIC_BKK_8134/2023 | V | 613 | D | 5 | 20231007 |
| EPI_ISL_16400587 | NSP3 | hCoV-19/USA/UT-UPHL-221230925203/2022 | V | 613 | E | 5 | 20221219 |
| EPI_ISL_18737168 | NSP3 | hCoV-19/Russia/SPE-RII-MH156410S/2023 | A | 614 | N | 17 | 20231209 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | A | 614 | insH | 1 | 20210806 |
| EPI_ISL_5441242 | NSP3 | hCoV-19/USA/ID-IBL-758892/2021 | A | 614 | insKQ | 1 | 20210918 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | A | 614 | R | 26 | 20230217 |
| EPI_ISL_13044526 | NSP3 | hCoV-19/USA/ID-IBL-821031/2022 | A | 614 | Q | 3 | 20220516 |
| EPI_ISL_19661862 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YEXAC/2024 | A | 614 | E | 337 | 20241123 |
| EPI_ISL_17711371 | NSP3 | hCoV-19/Thailand/NIC_NYK_2009/2023 | A | 614 | C | 5 | 20230428 |
| EPI_ISL_14588225 | NSP3 | hCoV-19/USA/ID-IBL-841705/2022 | A | 614 | M | 2 | 20220726 |
| EPI_ISL_19192499 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16034/2024 | A | 614 | K | 21 | 20240322 |
| EPI_ISL_5274121 | NSP3 | hCoV-19/England/PHEC-3K043K1F/2021 | A | 614 | stop | 3 | 20210930 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | A | 614 | F | 3 | 20230217 |
| EPI_ISL_18454283 | NSP3 | hCoV-19/Thailand/NIC_BKK_8134/2023 | A | 614 | L | 15 | 20231007 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | A | 614 | I | 1 | 20210802 |
| EPI_ISL_19572549 | NSP3 | hCoV-19/Japan/RB24-005-71/2024 | A | 614 | S | 106 | 20240828 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 614 | del | 302 | 20250116 |
| EPI_ISL_17201590 | NSP3 | hCoV-19/Chile/RM-18220/2023 | A | 614 | H | 5 | 20230301 |
| EPI_ISL_19823369 | NSP3 | hCoV-19/USA/NY-SUNYQB-XL3203/2025 | A | 614 | V | 2182 | 20250324 |
| EPI_ISL_18823209 | NSP3 | hCoV-19/Japan/PG-589371/2024 | A | 614 | P | 51 | 20240109 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | A | 614 | D | 4 | 20220818 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | A | 614 | Y | 2 | 20220825 |
| EPI_ISL_18454288 | NSP3 | hCoV-19/Thailand/NIC_BKK_8175/2023 | A | 614 | G | 16 | 20231019 |
| EPI_ISL_19756557 | NSP3 | hCoV-19/Russia/SPE-RII-MH223283S/2025 | A | 614 | T | 623 | 20250114 |
| EPI_ISL_3003316 | NSP3 | hCoV-19/England/OXON-F8ACCF/2020 | S | 615 | N | 1 | 20201201 |
| EPI_ISL_18526922 | NSP3 | hCoV-19/Canada/BC-BCCDC-668939/2023 | S | 615 | A | 120 | 20231103 |
| EPI_ISL_8188585 | NSP3 | hCoV-19/Nigeria/MRL-OS-2345/2021 | S | 615 | W | 4 | 20210419 |
| EPI_ISL_17821634 | NSP3 | hCoV-19/Brazil/RS-LMM74548/2023 | S | 615 | V | 4 | 20230501 |
| EPI_ISL_19192499 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16034/2024 | S | 615 | Q | 25 | 20240322 |
| EPI_ISL_17201501 | NSP3 | hCoV-19/Chile/RM-15130/2023 | S | 615 | H | 24 | 20230227 |
| EPI_ISL_19674189 | NSP3 | hCoV-19/Spain/CB-HUMV-9040445/2024 | S | 615 | L | 735 | 20241104 |
| EPI_ISL_18365021 | NSP3 | hCoV-19/Czech Republic/UMTM255807/2021 | S | 615 | insYK | 1 | 20210826 |
| EPI_ISL_18509641 | NSP3 | hCoV-19/Spain/CL-44905/2023 | S | 615 | P | 6 | 20231025 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 615 | del | 301 | 20250116 |
| EPI_ISL_17774497 | NSP3 | hCoV-19/Thailand/NIC_SNK_4685/2023 | S | 615 | Y | 5 | 20230530 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | S | 615 | K | 5 | 20220818 |
| EPI_ISL_18737168 | NSP3 | hCoV-19/Russia/SPE-RII-MH156410S/2023 | S | 615 | E | 18 | 20231209 |
| EPI_ISL_15306751 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-116270/2022 | S | 615 | R | 3 | 20220923 |
| EPI_ISL_5085298 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-44904/2020 | S | 615 | insstopLWCstopIL | 1 | 20200724 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | S | 615 | M | 7 | 20230217 |
| EPI_ISL_14881077 | NSP3 | hCoV-19/USA/ID-IBL-847392/2022 | S | 615 | D | 2 | 20220822 |
| EPI_ISL_18454288 | NSP3 | hCoV-19/Thailand/NIC_BKK_8175/2023 | S | 615 | stop | 30 | 20231019 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | S | 615 | C | 5 | 20221011 |
| EPI_ISL_19256628 | NSP3 | hCoV-19/Hubei/HCDC-XT5749/2024 | S | 615 | T | 54 | 20240531 |
| EPI_ISL_7509709 | NSP3 | hCoV-19/USA/CA-CSMC599/2020 | S | 615 | G | 2 | 20201023 |
| EPI_ISL_1730529 | NSP3 | hCoV-19/England/OXON-F7F6A1/2021 | S | 615 | F | 1 | 20210215 |
| EPI_ISL_18931711 | NSP3 | hCoV-19/Israel/ICH-741201023/2024 | L | 616 | F | 19 | 20240213 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 616 | insDGE | 3 | 20230217 |
| EPI_ISL_17201589 | NSP3 | hCoV-19/Chile/RM-18219/2023 | L | 616 | M | 8 | 20230301 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | L | 616 | N | 3 | 20220825 |
| EPI_ISL_17821698 | NSP3 | hCoV-19/Brazil/RS-LMM74090/2022 | L | 616 | W | 2 | 20221219 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 616 | del | 305 | 20250116 |
| EPI_ISL_19696763 | NSP3 | hCoV-19/Turkey/HSGM-AA002440/2023 | L | 616 | P | 11 | 20231019 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | L | 616 | Q | 4 | 20221121 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | L | 616 | C | 10 | 20221213 |
| EPI_ISL_15116857 | NSP3 | hCoV-19/Chile/RM-109887/2022 | L | 616 | H | 10 | 20220909 |
| EPI_ISL_15146034 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-24656/2022 | L | 616 | R | 22 | 20220908 |
| EPI_ISL_19564138 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC46120/2024 | L | 616 | I | 302 | 20241024 |
| EPI_ISL_17821634 | NSP3 | hCoV-19/Brazil/RS-LMM74548/2023 | L | 616 | V | 17 | 20230501 |
| EPI_ISL_16441640 | NSP3 | hCoV-19/England/BRBR-326667E6/2022 | L | 616 | Y | 6 | 20221228 |
| EPI_ISL_17201501 | NSP3 | hCoV-19/Chile/RM-15130/2023 | L | 616 | A | 7 | 20230227 |
| EPI_ISL_17201590 | NSP3 | hCoV-19/Chile/RM-18220/2023 | L | 616 | E | 6 | 20230301 |
| EPI_ISL_18999138 | NSP3 | hCoV-19/USA/IL-RIPHL_14384_G/2024 | L | 616 | J | 9 | 20240301 |
| EPI_ISL_17711371 | NSP3 | hCoV-19/Thailand/NIC_NYK_2009/2023 | L | 616 | D | 1 | 20230428 |
| EPI_ISL_15792379 | NSP3 | hCoV-19/Chile/AI-123636/2022 | L | 616 | T | 4 | 20221025 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | L | 616 | insWCstop | 6 | 20220726 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 616 | K | 6 | 20230410 |
| EPI_ISL_18454283 | NSP3 | hCoV-19/Thailand/NIC_BKK_8134/2023 | L | 616 | stop | 30 | 20231007 |
| EPI_ISL_13065566 | NSP3 | hCoV-19/Thailand/NIC_LPG_19036/2022 | L | 616 | insstop | 1 | 20220507 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | L | 616 | G | 1 | 20210319 |
| EPI_ISL_16464628 | NSP3 | hCoV-19/Brazil/SP-IB_CEVC_2204261/2022 | I | 617 | N | 6 | 20221128 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | I | 617 | insN | 1 | 20210801 |
| EPI_ISL_16441640 | NSP3 | hCoV-19/England/BRBR-326667E6/2022 | I | 617 | Q | 10 | 20221228 |
| EPI_ISL_19192499 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16034/2024 | I | 617 | stop | 23 | 20240322 |
| EPI_ISL_18865600 | NSP3 | hCoV-19/USA/NY-NYCPHL-016811/2023 | I | 617 | insXXX | 1 | 20230126 |
| EPI_ISL_19764090 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56450/2025 | I | 617 | V | 1068 | 20250203 |
| EPI_ISL_17821634 | NSP3 | hCoV-19/Brazil/RS-LMM74548/2023 | I | 617 | G | 1 | 20230501 |
| EPI_ISL_19170191 | NSP3 | hCoV-19/India/KA-INCOV295500/2024 | I | 617 | L | 39 | 20240319 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | I | 617 | H | 8 | 20211227 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | I | 617 | T | 8 | 20230116 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 617 | del | 303 | 20250116 |
| EPI_ISL_17774497 | NSP3 | hCoV-19/Thailand/NIC_SNK_4685/2023 | I | 617 | F | 5 | 20230530 |
| EPI_ISL_12529674 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-Apollo-COV11667/22 OPP9764392/2022 | I | 617 | M | 3 | 20220422 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | I | 617 | insQ | 1 | 20210809 |
| EPI_ISL_14841712 | NSP3 | hCoV-19/India/JK-758978199/2022 | I | 617 | J | 7 | 20220728 |
| EPI_ISL_17631889 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200372378N2/2022 | I | 617 | insXXXX | 1 | 20220310 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | I | 617 | A | 10 | 20230217 |
| EPI_ISL_17821698 | NSP3 | hCoV-19/Brazil/RS-LMM74090/2022 | I | 617 | K | 2 | 20221219 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | I | 617 | Y | 14 | 20230217 |
| EPI_ISL_14718232 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19515/2022 | I | 617 | S | 17 | 20220805 |
| EPI_ISL_17201501 | NSP3 | hCoV-19/Chile/RM-15130/2023 | I | 617 | E | 7 | 20230227 |
| EPI_ISL_10827353 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-87121/2022 | N | 618 | Q | 2 | 20220128 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | N | 618 | G | 3 | 20230404 |
| EPI_ISL_18543723 | NSP3 | hCoV-19/Spain/GA-CHUVI-52180643/2023 | N | 618 | C | 43 | 20231010 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | N | 618 | R | 17 | 20230401 |
| EPI_ISL_18935771 | NSP3 | hCoV-19/Japan/EIS01-744/2024 | N | 618 | H | 38 | 20240203 |
| EPI_ISL_17624499 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200355211N2/2022 | N | 618 | insXX | 1 | 20220210 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | N | 618 | E | 42 | 20230815 |
| EPI_ISL_17201589 | NSP3 | hCoV-19/Chile/RM-18219/2023 | N | 618 | A | 8 | 20230301 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | N | 618 | insPY | 1 | 20230302 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | N | 618 | P | 1 | 20230410 |
| EPI_ISL_16979857 | NSP3 | hCoV-19/Italy/LOM-UniMI-110/2022 | N | 618 | F | 2 | 20221104 |
| EPI_ISL_19498117 | NSP3 | hCoV-19/Denmark/DCGC-689771/2024 | N | 618 | Y | 80 | 20241007 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 618 | V | 1 | 20210318 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | N | 618 | del | 274 | 20250116 |
| EPI_ISL_19565351 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000578601/2024 | N | 618 | K | 75 | 20241022 |
| EPI_ISL_19541979 | NSP3 | hCoV-19/Russia/TA-RII-MH205489S/2024 | N | 618 | D | 444 | 20240923 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | N | 618 | insVLDF | 1 | 20211122 |
| EPI_ISL_19825424 | NSP3 | hCoV-19/USA/NE-NPHL-RP252229/2025 | N | 618 | S | 515 | 20250330 |
| EPI_ISL_7509709 | NSP3 | hCoV-19/USA/CA-CSMC599/2020 | N | 618 | W | 1 | 20201023 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | N | 618 | L | 17 | 20220726 |
| EPI_ISL_18053556 | NSP3 | hCoV-19/USA/OR-OHSU-231860115/2023 | N | 618 | I | 9 | 20230421 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | N | 618 | M | 2 | 20211122 |
| EPI_ISL_17821673 | NSP3 | hCoV-19/Brazil/RS-LMM74407/2023 | N | 618 | T | 240 | 20230415 |
| EPI_ISL_17523574 | NSP3 | hCoV-19/USA/TX-HMH-M-127968/2023 | N | 618 | B | 21 | 20230404 |
| EPI_ISL_19779769 | NSP3 | hCoV-19/Italy/FVG-TS-65332461/2025 | T | 619 | I | 4201 | 20250210 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | T | 619 | N | 3 | 20220825 |
| EPI_ISL_19695386 | NSP3 | hCoV-19/Germany/MV-RKI-I-1147417/2025 | T | 619 | S | 73 | 20250103 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | T | 619 | D | 2 | 20220209 |
| EPI_ISL_16979857 | NSP3 | hCoV-19/Italy/LOM-UniMI-110/2022 | T | 619 | G | 2 | 20221104 |
| EPI_ISL_17821634 | NSP3 | hCoV-19/Brazil/RS-LMM74548/2023 | T | 619 | L | 9 | 20230501 |
| EPI_ISL_19155429 | NSP3 | hCoV-19/USA/RI-RISHL-2401116/2024 | T | 619 | A | 158 | 20240429 |
| EPI_ISL_19792707 | NSP3 | hCoV-19/Czech Republic/NRL_s797/2024 | T | 619 | K | 205 | 20241030 |
| EPI_ISL_19706584 | NSP3 | hCoV-19/Brazil/SE-FIOCRUZ-13485/2024 | T | 619 | R | 3 | 20241217 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 619 | E | 6 | 20230404 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | T | 619 | H | 82 | 20230401 |
| EPI_ISL_2348774 | NSP3 | hCoV-19/Ecuador/NIC-INSPI-317767/2021 | T | 619 | Q | 3 | 20210513 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | T | 619 | M | 31 | 20230815 |
| EPI_ISL_12529683 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-Apollo-MO02488827/2022 | T | 619 | stop | 3 | 20220426 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 619 | V | 9 | 20230116 |
| EPI_ISL_17821673 | NSP3 | hCoV-19/Brazil/RS-LMM74407/2023 | T | 619 | P | 10 | 20230415 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | T | 619 | Y | 1 | 20210806 |
| EPI_ISL_7509709 | NSP3 | hCoV-19/USA/CA-CSMC599/2020 | T | 619 | C | 1 | 20201023 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 619 | del | 311 | 20250116 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | T | 619 | insH | 1 | 20210802 |
| EPI_ISL_17735472 | NSP3 | hCoV-19/Thailand/NIC_NBI_4335/2023 | L | 620 | I | 86 | 20230510 |
| EPI_ISL_17201589 | NSP3 | hCoV-19/Chile/RM-18219/2023 | L | 620 | A | 5 | 20230301 |
| EPI_ISL_14308005 | NSP3 | hCoV-19/Chile/LR-93058/2022 | L | 620 | C | 6 | 20220726 |
| EPI_ISL_19813384 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56783/2025 | L | 620 | F | 2164 | 20250319 |
| EPI_ISL_19348695 | NSP3 | hCoV-19/Morocco/21/2020 | L | 620 | K | 1 | 20200627 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | L | 620 | stop | 4 | 20210809 |
| EPI_ISL_16979857 | NSP3 | hCoV-19/Italy/LOM-UniMI-110/2022 | L | 620 | P | 12 | 20221104 |
| EPI_ISL_17821673 | NSP3 | hCoV-19/Brazil/RS-LMM74407/2023 | L | 620 | R | 6 | 20230415 |
| EPI_ISL_14038210 | NSP3 | hCoV-19/Chile/LR-86995/2022 | L | 620 | E | 1 | 20220711 |
| EPI_ISL_14718232 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19515/2022 | L | 620 | M | 1 | 20220805 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 620 | del | 317 | 20250116 |
| EPI_ISL_19373467 | NSP3 | hCoV-19/Mexico/GRO_InDRE_FB891/2024 | L | 620 | H | 12 | 20240322 |
| EPI_ISL_19069763 | NSP3 | hCoV-19/Japan/FR028-0022/2024 | L | 620 | J | 10 | 20240403 |
| EPI_ISL_17711371 | NSP3 | hCoV-19/Thailand/NIC_NYK_2009/2023 | L | 620 | T | 29 | 20230428 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 620 | D | 1 | 20230410 |
| EPI_ISL_18454268 | NSP3 | hCoV-19/Thailand/NIC_BKK_8048/2023 | L | 620 | Y | 2 | 20230825 |
| EPI_ISL_17238817 | NSP3 | hCoV-19/Italy/CAM-20230217250_IZSM_COLLI_TIGEM/2023 | L | 620 | S | 3 | 20230219 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | L | 620 | V | 12 | 20230404 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | N | 621 | Q | 1 | 20220209 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | N | 621 | G | 1 | 20230404 |
| EPI_ISL_17735472 | NSP3 | hCoV-19/Thailand/NIC_NBI_4335/2023 | N | 621 | C | 4 | 20230510 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | N | 621 | L | 3 | 20220818 |
| EPI_ISL_19071767 | NSP3 | hCoV-19/Lithuania/MB240325_0127/2024 | N | 621 | I | 4 | 20240110 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | N | 621 | S | 30 | 20230404 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | N | 621 | F | 1 | 20200729 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | N | 621 | W | 9 | 20221213 |
| EPI_ISL_9428306 | NSP3 | hCoV-19/France/GES-HMN-22012100694/2022 | N | 621 | B | 2 | 20220103 |
| EPI_ISL_19354919 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-105593/2024 | N | 621 | K | 21 | 20240708 |
| EPI_ISL_19363900 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14177/2024 | N | 621 | Y | 6 | 20240601 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | N | 621 | del | 275 | 20250116 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | N | 621 | P | 3 | 20230217 |
| EPI_ISL_18454268 | NSP3 | hCoV-19/Thailand/NIC_BKK_8048/2023 | N | 621 | M | 2 | 20230825 |
| EPI_ISL_16987031 | NSP3 | hCoV-19/Chile/AN-ISPC-11245/2023 | N | 621 | insW | 1 | 20230212 |
| EPI_ISL_1932715 | NSP3 | hCoV-19/Japan/PG-32675/2021 | N | 621 | insY | 1 | 20210403 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | N | 621 | R | 9 | 20230217 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | N | 621 | H | 8 | 20220726 |
| EPI_ISL_17201589 | NSP3 | hCoV-19/Chile/RM-18219/2023 | N | 621 | E | 10 | 20230301 |
| EPI_ISL_17774519 | NSP3 | hCoV-19/Thailand/NIC_SNI_4774/2023 | N | 621 | V | 3 | 20230530 |
| EPI_ISL_17821693 | NSP3 | hCoV-19/Brazil/RS-LMM74158/2023 | N | 621 | D | 7 | 20230315 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | N | 621 | A | 34 | 20230815 |
| EPI_ISL_16979857 | NSP3 | hCoV-19/Italy/LOM-UniMI-110/2022 | N | 621 | T | 67 | 20221104 |
| EPI_ISL_18419683 | NSP3 | hCoV-19/Japan/PG-576861/2023 | D | 622 | V | 15 | 20230927 |
| EPI_ISL_18669066 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200662038N2/2023 | D | 622 | insXXX | 1 | 20231213 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | D | 622 | I | 54 | 20220729 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | D | 622 | T | 7 | 20221011 |
| EPI_ISL_19424621 | NSP3 | hCoV-19/Japan/FR011-0627/2024 | D | 622 | A | 192 | 20240824 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | D | 622 | P | 3 | 20220225 |
| EPI_ISL_19220991 | NSP3 | hCoV-19/Spain/EX-BA_18640327/2024 | D | 622 | L | 15 | 20240607 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | D | 622 | insSGFKWLHCRGGKDSAstopKVstopKCF | 1 | 20230217 |
| EPI_ISL_16371973 | NSP3 | hCoV-19/Chile/RM-139340/2022 | D | 622 | M | 3 | 20221222 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | D | 622 | R | 2 | 20230116 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | D | 622 | insstop | 1 | 20210719 |
| EPI_ISL_19754973 | NSP3 | hCoV-19/USA/NY-NYULH-22286/2025 | D | 622 | N | 1460 | 20250214 |
| EPI_ISL_19363900 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14177/2024 | D | 622 | S | 6 | 20240601 |
| EPI_ISL_19479413 | NSP3 | hCoV-19/Mexico/PUE_InDRE_FB1497/2024 | D | 622 | E | 453 | 20240718 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | D | 622 | K | 168 | 20230217 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | D | 622 | del | 246 | 20250116 |
| EPI_ISL_19816677 | NSP3 | hCoV-19/Philippines/PH-RITM-4929/2025 | D | 622 | Y | 639 | 20250124 |
| EPI_ISL_19784124 | NSP3 | hCoV-19/USA/NY-CDC-LC1134905/2025 | D | 622 | G | 426 | 20250306 |
| EPI_ISL_17496098 | NSP3 | hCoV-19/Singapore/R24MR43/2023 | D | 622 | B | 28 | 20230405 |
| EPI_ISL_19449114 | NSP3 | hCoV-19/USA/CA-SEARCH-141621/2024 | D | 622 | H | 60 | 20240727 |
| EPI_ISL_12613099 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-BCH-00016604/2022 | D | 622 | stop | 1 | 20220428 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | D | 622 | Q | 9 | 20220726 |
| EPI_ISL_19620720 | NSP3 | hCoV-19/Canada/ON-PHL-202424445/2024 | L | 623 | I | 100 | 20241206 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | L | 623 | C | 12 | 20221213 |
| EPI_ISL_17688923 | NSP3 | hCoV-19/USA/CA-HLX-STM-X9XJR94U4/2023 | L | 623 | Q | 21 | 20230413 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 623 | G | 2 | 20211006 |
| EPI_ISL_18616136 | NSP3 | hCoV-19/Israel/ICH-741200047/2023 | L | 623 | P | 11 | 20231205 |
| EPI_ISL_18287769 | NSP3 | hCoV-19/France/IDF-AphpSA-882305093166/2023 | L | 623 | K | 45 | 20230529 |
| EPI_ISL_17821685 | NSP3 | hCoV-19/Brazil/RS-LMM74235/2023 | L | 623 | T | 4 | 20230329 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | L | 623 | A | 36 | 20230815 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | L | 623 | insK | 1 | 20220818 |
| EPI_ISL_12947356 | NSP3 | hCoV-19/Japan/PG-231785/2022 | L | 623 | E | 1 | 20220324 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 623 | del | 228 | 20250116 |
| EPI_ISL_12613099 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-BCH-00016604/2022 | L | 623 | R | 1 | 20220428 |
| EPI_ISL_5085298 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-44904/2020 | L | 623 | insSVTYQHTstopRS | 1 | 20200724 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | L | 623 | insP | 5 | 20230217 |
| EPI_ISL_19363900 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14177/2024 | L | 623 | V | 18 | 20240601 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | L | 623 | M | 2 | 20220818 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | L | 623 | insKWARFPKSDG | 1 | 20220209 |
| EPI_ISL_7547077 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081721-1058/2021 | L | 623 | Y | 1 | 20210817 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | L | 623 | F | 5 | 20230429 |
| EPI_ISL_17821673 | NSP3 | hCoV-19/Brazil/RS-LMM74407/2023 | L | 623 | N | 1 | 20230415 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | L | 623 | stop | 61 | 20220729 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | L | 623 | S | 4 | 20230404 |
| EPI_ISL_19180821 | NSP3 | hCoV-19/Singapore/R24MQ92/2024 | L | 623 | J | 10 | 20240426 |
| EPI_ISL_17479494 | NSP3 | hCoV-19/Thailand/NIC_BKK_1065/2023 | N | 624 | stop | 5 | 20230314 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | N | 624 | M | 62 | 20220729 |
| EPI_ISL_18287769 | NSP3 | hCoV-19/France/IDF-AphpSA-882305093166/2023 | N | 624 | Q | 45 | 20230529 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | N | 624 | del | 203 | 20250116 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | N | 624 | Y | 2 | 20230116 |
| EPI_ISL_19496111 | NSP3 | hCoV-19/USA/AZ-ASPHL-1746/2024 | N | 624 | D | 86 | 20240930 |
| EPI_ISL_17492934 | NSP3 | hCoV-19/Sichuan/SCDC-0003/2023 | N | 624 | K | 102 | 20230219 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | N | 624 | E | 44 | 20230815 |
| EPI_ISL_19296840 | NSP3 | hCoV-19/env/Ukraine/85573/2024 | N | 624 | S | 211 | 20240325 |
| EPI_ISL_19220991 | NSP3 | hCoV-19/Spain/EX-BA_18640327/2024 | N | 624 | L | 7 | 20240607 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | N | 624 | insNX | 1 | 20230429 |
| EPI_ISL_17821685 | NSP3 | hCoV-19/Brazil/RS-LMM74235/2023 | N | 624 | P | 3 | 20230329 |
| EPI_ISL_19334600 | NSP3 | hCoV-19/Egypt/CPHL-EGY24146/2024 | N | 624 | I | 5 | 20240623 |
| EPI_ISL_17267469 | NSP3 | hCoV-19/England/PHEC-YYEKORC/2023 | N | 624 | B | 6 | 20230303 |
| EPI_ISL_18948616 | NSP3 | hCoV-19/South Korea/KDCA286272/2024 | N | 624 | T | 41 | 20240205 |
| EPI_ISL_13718864 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2713/2022 | N | 624 | C | 1 | 20220616 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | N | 624 | insIstopM | 8 | 20211227 |
| EPI_ISL_17500140 | NSP3 | hCoV-19/Chile/AN-29740/2023 | N | 624 | R | 81 | 20230408 |
| EPI_ISL_16371973 | NSP3 | hCoV-19/Chile/RM-139340/2022 | N | 624 | A | 3 | 20221222 |
| EPI_ISL_19800189 | NSP3 | hCoV-19/Japan/FR048-0063/2025 | N | 624 | H | 496 | 20250306 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | E | 625 | M | 1 | 20210804 |
| EPI_ISL_19348695 | NSP3 | hCoV-19/Morocco/21/2020 | E | 625 | C | 1 | 20200627 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | E | 625 | A | 12 | 20221121 |
| EPI_ISL_12319909 | NSP3 | hCoV-19/Turkey/HSGM-GS1613/2022 | E | 625 | R | 2 | 20220401 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | E | 625 | D | 36 | 20230217 |
| EPI_ISL_19225527 | NSP3 | hCoV-19/Spain/CT-HUGTiP-A1R183/2024 | E | 625 | K | 118 | 20240619 |
| EPI_ISL_19220991 | NSP3 | hCoV-19/Spain/EX-BA_18640327/2024 | E | 625 | Q | 22 | 20240607 |
| EPI_ISL_17423435 | NSP3 | hCoV-19/England/BRBR-3271733A/2023 | E | 625 | Z | 15 | 20230329 |
| EPI_ISL_17821685 | NSP3 | hCoV-19/Brazil/RS-LMM74235/2023 | E | 625 | S | 4 | 20230329 |
| EPI_ISL_15349539 | NSP3 | hCoV-19/Spain/GA-SCQ_22-298330/2022 | E | 625 | stop | 34 | 20220917 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 625 | Y | 1 | 20210318 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | E | 625 | P | 5 | 20230404 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 625 | del | 169 | 20250116 |
| EPI_ISL_17821697 | NSP3 | hCoV-19/Brazil/RS-LMM74091/2022 | E | 625 | G | 11 | 20221219 |
| EPI_ISL_17821693 | NSP3 | hCoV-19/Brazil/RS-LMM74158/2023 | E | 625 | V | 11 | 20230315 |
| EPI_ISL_9679161 | NSP3 | hCoV-19/India/MH-RFIP07779/2022 | E | 625 | insXXXXXXXXXX | 1 | 20220104 |
| EPI_ISL_13620936 | NSP3 | hCoV-19/Turkey/HSGM-IST-02993/2022 | E | 625 | L | 1 | 20220623 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | E | 625 | T | 12 | 20230302 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | E | 625 | H | 18 | 20230401 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | E | 625 | N | 15 | 20220726 |
| EPI_ISL_17821673 | NSP3 | hCoV-19/Brazil/RS-LMM74407/2023 | E | 625 | W | 4 | 20230415 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | T | 626 | D | 4 | 20230404 |
| EPI_ISL_18466656 | NSP3 | hCoV-19/Croatia/HZJZ_5523/2023 | T | 626 | S | 27 | 20230818 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | T | 626 | H | 1 | 20230302 |
| EPI_ISL_17238817 | NSP3 | hCoV-19/Italy/CAM-20230217250_IZSM_COLLI_TIGEM/2023 | T | 626 | V | 6 | 20230219 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | T | 626 | Y | 2 | 20230410 |
| EPI_ISL_19790234 | NSP3 | hCoV-19/Netherlands/NH-RIVM-145198/2025 | T | 626 | A | 4762 | 20250226 |
| EPI_ISL_16979865 | NSP3 | hCoV-19/Italy/LOM-UniMI-118/2022 | T | 626 | Q | 1 | 20221116 |
| EPI_ISL_19161424 | NSP3 | hCoV-19/South Korea/KDCA293054/2024 | T | 626 | P | 86 | 20240429 |
| EPI_ISL_19831290 | NSP3 | hCoV-19/Australia/WA16907/2025 | T | 626 | I | 1265 | 20250327 |
| EPI_ISL_11497245 | NSP3 | hCoV-19/France/GES-HMN-22032081260/2022 | T | 626 | F | 1 | 20220228 |
| EPI_ISL_18424118 | NSP3 | hCoV-19/USA/TX-HMH-134554/2023 | T | 626 | L | 97 | 20230929 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | T | 626 | R | 2 | 20210805 |
| EPI_ISL_15377059 | NSP3 | hCoV-19/USA/ID-IBL-857506/2022 | T | 626 | W | 7 | 20220921 |
| EPI_ISL_17430582 | NSP3 | hCoV-19/Dominican Republic/ 2134021-LNSPDD/2023 | T | 626 | K | 7 | 20230221 |
| EPI_ISL_17500140 | NSP3 | hCoV-19/Chile/AN-29740/2023 | T | 626 | M | 86 | 20230408 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | T | 626 | insKF | 5 | 20221011 |
| EPI_ISL_19220991 | NSP3 | hCoV-19/Spain/EX-BA_18640327/2024 | T | 626 | C | 14 | 20240607 |
| EPI_ISL_19696049 | NSP3 | hCoV-19/USA/MN-MDH-45609/2025 | T | 626 | N | 790 | 20250114 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 626 | del | 166 | 20250116 |
| EPI_ISL_17500131 | NSP3 | hCoV-19/Chile/RM-29581/2023 | T | 626 | E | 4 | 20230407 |
| EPI_ISL_17821693 | NSP3 | hCoV-19/Brazil/RS-LMM74158/2023 | L | 627 | R | 5 | 20230315 |
| EPI_ISL_16979857 | NSP3 | hCoV-19/Italy/LOM-UniMI-110/2022 | L | 627 | D | 1 | 20221104 |
| EPI_ISL_13718864 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2713/2022 | L | 627 | K | 1 | 20220616 |
| EPI_ISL_17821636 | NSP3 | hCoV-19/Brazil/RS-LMM74544/2023 | L | 627 | E | 4 | 20230429 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | L | 627 | insK | 1 | 20220225 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | L | 627 | Y | 7 | 20230217 |
| EPI_ISL_17500131 | NSP3 | hCoV-19/Chile/RM-29581/2023 | L | 627 | M | 12 | 20230407 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | L | 627 | insQHTstopRSKstopNS | 1 | 20210114 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 627 | del | 170 | 20250116 |
| EPI_ISL_17623925 | NSP3 | hCoV-19/Thailand/NIC_BKK_1741/2023 | L | 627 | T | 20 | 20230426 |
| EPI_ISL_19639612 | NSP3 | hCoV-19/USA/NJ-CDC-LC1126248/2024 | L | 627 | J | 13 | 20241204 |
| EPI_ISL_14588225 | NSP3 | hCoV-19/USA/ID-IBL-841705/2022 | L | 627 | insP | 1 | 20220726 |
| EPI_ISL_14381105 | NSP3 | hCoV-19/Germany/NW-RKI-I-919477/2022 | L | 627 | insVTMPLGYVTHGLNLEEAARYMRSLNDLNETL | 1 | 20220711 |
| EPI_ISL_15855234 | NSP3 | hCoV-19/Chile/AR-124883/2022 | L | 627 | F | 7 | 20221103 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | L | 627 | A | 9 | 20230404 |
| EPI_ISL_19348695 | NSP3 | hCoV-19/Morocco/21/2020 | L | 627 | G | 1 | 20200627 |
| EPI_ISL_19563339 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-143823/2024 | L | 627 | V | 23 | 20241105 |
| EPI_ISL_17260607 | NSP3 | hCoV-19/USA/ID-IBL-877838/2023 | L | 627 | insKRLYLNRNIF | 1 | 20230222 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | L | 627 | C | 4 | 20230429 |
| EPI_ISL_11795902 | NSP3 | hCoV-19/India/KA_14049_S163_R1_001/2022 | L | 627 | N | 2 | 20220220 |
| EPI_ISL_16385584 | NSP3 | hCoV-19/USA/NY-NYULH9891/2022 | L | 627 | P | 6 | 20221219 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | L | 627 | Q | 3 | 20220818 |
| EPI_ISL_19220991 | NSP3 | hCoV-19/Spain/EX-BA_18640327/2024 | L | 627 | H | 9 | 20240607 |
| EPI_ISL_7547077 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081721-1058/2021 | L | 627 | W | 2 | 20210817 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | L | 627 | insSYLFQHANLDSCKRVLNV | 1 | 20230404 |
| EPI_ISL_19783919 | NSP3 | hCoV-19/Canada/AB-ABPHL-131363/2025 | L | 627 | I | 494 | 20250301 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | L | 627 | S | 11 | 20220726 |
| EPI_ISL_19107684 | NSP3 | hCoV-19/Honduras/FM-198/2024 | V | 628 | del | 180 | 20240210 |
| EPI_ISL_16935325 | NSP3 | hCoV-19/Chile/LL-8790/2023 | V | 628 | insH | 2 | 20230202 |
| EPI_ISL_17030430 | NSP3 | hCoV-19/Italy/SIC-CQRC-3423005993/2023 | V | 628 | F | 8 | 20230208 |
| EPI_ISL_18287769 | NSP3 | hCoV-19/France/IDF-AphpSA-882305093166/2023 | V | 628 | G | 47 | 20230529 |
| EPI_ISL_13356247 | NSP3 | hCoV-19/USA/WA-UW-22060619374/2022 | V | 628 | N | 6 | 20220606 |
| EPI_ISL_17260607 | NSP3 | hCoV-19/USA/ID-IBL-877838/2023 | V | 628 | E | 2 | 20230222 |
| EPI_ISL_17548844 | NSP3 | hCoV-19/England/PHEC-YYEWKU6/2023 | V | 628 | D | 3 | 20230409 |
| EPI_ISL_17479494 | NSP3 | hCoV-19/Thailand/NIC_BKK_1065/2023 | V | 628 | S | 8 | 20230314 |
| EPI_ISL_19812680 | NSP3 | hCoV-19/Malaysia/UNIMAS-HSIBUML739/2024 | V | 628 | L | 114 | 20241025 |
| EPI_ISL_10080757 | NSP3 | hCoV-19/India/KA-SEQ_9827_S218_R1_001/2022 | V | 628 | stop | 2 | 20220103 |
| EPI_ISL_17821693 | NSP3 | hCoV-19/Brazil/RS-LMM74158/2023 | V | 628 | R | 3 | 20230315 |
| EPI_ISL_18226322 | NSP3 | hCoV-19/env/India/MH-FMR_B7-50a/2023 | V | 628 | Y | 9 | 20230222 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | V | 628 | C | 3 | 20210802 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | V | 628 | T | 8 | 20230410 |
| EPI_ISL_19185375 | NSP3 | hCoV-19/Japan/FR012-0128/2024 | V | 628 | K | 3 | 20240507 |
| EPI_ISL_18983268 | NSP3 | hCoV-19/env/Ukraine/84711/2024 | V | 628 | A | 95 | 20240201 |
| EPI_ISL_17821685 | NSP3 | hCoV-19/Brazil/RS-LMM74235/2023 | V | 628 | P | 1 | 20230329 |
| EPI_ISL_19831471 | NSP3 | hCoV-19/Japan/FR049-0172/2025 | V | 628 | I | 1114 | 20250221 |
| EPI_ISL_19107684 | NSP3 | hCoV-19/Honduras/FM-198/2024 | T | 629 | del | 208 | 20240210 |
| EPI_ISL_18226322 | NSP3 | hCoV-19/env/India/MH-FMR_B7-50a/2023 | T | 629 | N | 3 | 20230222 |
| EPI_ISL_17821636 | NSP3 | hCoV-19/Brazil/RS-LMM74544/2023 | T | 629 | R | 7 | 20230429 |
| EPI_ISL_19622148 | NSP3 | hCoV-19/Brazil/PR-LACENPR-415820698/2024 | T | 629 | I | 21 | 20241031 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | T | 629 | Y | 3 | 20230217 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | T | 629 | F | 3 | 20230429 |
| EPI_ISL_18226322 | NSP3 | hCoV-19/env/India/MH-FMR_B7-50a/2023 | T | 629 | insATWLCNTW | 1 | 20230222 |
| EPI_ISL_17281268 | NSP3 | hCoV-19/England/PLYM-32705DD7/2023 | T | 629 | K | 21 | 20230314 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | T | 629 | insYQHITIstop | 1 | 20210805 |
| EPI_ISL_16907045 | NSP3 | hCoV-19/Italy/LOM-UniMI56/2022 | T | 629 | L | 9 | 20221130 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 629 | G | 1 | 20210318 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | T | 629 | D | 1 | 20210823 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 629 | Q | 60 | 20250116 |
| EPI_ISL_17479494 | NSP3 | hCoV-19/Thailand/NIC_BKK_1065/2023 | T | 629 | E | 8 | 20230314 |
| EPI_ISL_17821630 | NSP3 | hCoV-19/Brazil/RS-LMM74565/2023 | T | 629 | S | 9 | 20230507 |
| EPI_ISL_19220991 | NSP3 | hCoV-19/Spain/EX-BA_18640327/2024 | T | 629 | A | 95 | 20240607 |
| EPI_ISL_10946837 | NSP3 | hCoV-19/France/IDF-HMN-22022220307/2021 | T | 629 | J | 1 | 20211220 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | T | 629 | insstop | 1 | 20230302 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | T | 629 | stop | 21 | 20230401 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 629 | C | 1 | 20230404 |
| EPI_ISL_16979865 | NSP3 | hCoV-19/Italy/LOM-UniMI-118/2022 | T | 629 | P | 2 | 20221116 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | T | 629 | insELEPPCRFVTD | 1 | 20220209 |
| EPI_ISL_17236485 | NSP3 | hCoV-19/India/GJ-GBRC10328/2023 | T | 629 | V | 7 | 20230303 |
| EPI_ISL_18454281 | NSP3 | hCoV-19/Thailand/NIC_PLK_8113/2023 | T | 629 | M | 6 | 20231007 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | T | 629 | insW | 3 | 20220117 |
| EPI_ISL_17466542 | NSP3 | hCoV-19/Chile/BI-27459/2023 | T | 629 | H | 54 | 20230331 |
| EPI_ISL_16814991 | NSP3 | hCoV-19/United Arab Emirates/BTC-5501/2021 | M | 630 | F | 1 | 20210530 |
| EPI_ISL_17821673 | NSP3 | hCoV-19/Brazil/RS-LMM74407/2023 | M | 630 | A | 62 | 20230415 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | M | 630 | Y | 8 | 20230410 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | M | 630 | insQHTstopRSKstopNSCYN | 1 | 20220726 |
| EPI_ISL_18286018 | NSP3 | hCoV-19/Italy/LOM-UniMI133/2023 | M | 630 | L | 41 | 20230710 |
| EPI_ISL_19729277 | NSP3 | hCoV-19/Japan/FR011-0065/2025 | M | 630 | V | 220 | 20250130 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | M | 630 | G | 5 | 20221121 |
| EPI_ISL_19799714 | NSP3 | hCoV-19/USA/TX-HMH-M-147695/2025 | M | 630 | stop | 4 | 20250306 |
| EPI_ISL_17260607 | NSP3 | hCoV-19/USA/ID-IBL-877838/2023 | M | 630 | S | 6 | 20230222 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | M | 630 | N | 8 | 20221011 |
| EPI_ISL_19200984 | NSP3 | hCoV-19/USA/NY-URMC-O5S1O419-1/2024 | M | 630 | K | 57 | 20240515 |
| EPI_ISL_19813371 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56770/2025 | M | 630 | T | 776 | 20250320 |
| EPI_ISL_18454281 | NSP3 | hCoV-19/Thailand/NIC_PLK_8113/2023 | M | 630 | E | 4 | 20231007 |
| EPI_ISL_15110772 | NSP3 | hCoV-19/Wales/PHWC-PKRYB1/2022 | M | 630 | Q | 5 | 20220903 |
| EPI_ISL_11795935 | NSP3 | hCoV-19/India/KA_14120_S358_R1_001/2022 | M | 630 | D | 4 | 20220220 |
| EPI_ISL_16814945 | NSP3 | hCoV-19/United Arab Emirates/BTC-6086/2021 | M | 630 | insstop | 1 | 20210626 |
| EPI_ISL_17500131 | NSP3 | hCoV-19/Chile/RM-29581/2023 | M | 630 | H | 4 | 20230407 |
| EPI_ISL_19107684 | NSP3 | hCoV-19/Honduras/FM-198/2024 | M | 630 | del | 216 | 20240210 |
| EPI_ISL_19070019 | NSP3 | hCoV-19/USA/NY-CDC-QDX95106591/2024 | M | 630 | I | 285 | 20240404 |
| EPI_ISL_18226312 | NSP3 | hCoV-19/env/India/MH-FMR_D1-15a/2022 | M | 630 | C | 59 | 20221010 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | M | 630 | R | 22 | 20250116 |
| EPI_ISL_14588225 | NSP3 | hCoV-19/USA/ID-IBL-841705/2022 | P | 631 | N | 2 | 20220726 |
| EPI_ISL_19363900 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14177/2024 | P | 631 | G | 4 | 20240601 |
| EPI_ISL_14356733 | NSP3 | hCoV-19/Chile/BI-95659/2022 | P | 631 | insWXXXXX | 1 | 20220803 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | P | 631 | stop | 6 | 20230217 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | P | 631 | K | 33 | 20230401 |
| EPI_ISL_17466542 | NSP3 | hCoV-19/Chile/BI-27459/2023 | P | 631 | E | 52 | 20230331 |
| EPI_ISL_16913052 | NSP3 | hCoV-19/Italy/LOM-UniMI52/2022 | P | 631 | H | 66 | 20221125 |
| EPI_ISL_17821675 | NSP3 | hCoV-19/Brazil/RS-LMM74400/2023 | P | 631 | I | 7 | 20230414 |
| EPI_ISL_18841927 | NSP3 | hCoV-19/Thailand/NIC_SKA_8871/2023 | P | 631 | S | 54 | 20231222 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | P | 631 | W | 2 | 20210915 |
| EPI_ISL_19769512 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00077/2022 | P | 631 | M | 2 | 20221119 |
| EPI_ISL_18570569 | NSP3 | hCoV-19/USA/MS-MSPHL-0862/2023 | P | 631 | T | 15 | 20231116 |
| EPI_ISL_15110772 | NSP3 | hCoV-19/Wales/PHWC-PKRYB1/2022 | P | 631 | C | 3 | 20220903 |
| EPI_ISL_3409992 | NSP3 | hCoV-19/USA/MA-UMASSMED-P017C8/2021 | P | 631 | R | 1 | 20210414 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | P | 631 | Y | 10 | 20230404 |
| EPI_ISL_19185375 | NSP3 | hCoV-19/Japan/FR012-0128/2024 | P | 631 | V | 3 | 20240507 |
| EPI_ISL_18823299 | NSP3 | hCoV-19/South Korea/KDCA282492/2023 | P | 631 | L | 20 | 20231229 |
| EPI_ISL_18771586 | NSP3 | hCoV-19/Thailand/NIC_BKK_8374/2023 | P | 631 | F | 24 | 20231114 |
| EPI_ISL_19107684 | NSP3 | hCoV-19/Honduras/FM-198/2024 | P | 631 | del | 229 | 20240210 |
| EPI_ISL_8882740 | NSP3 | hCoV-19/India/GA-NCCS-3055200149898/2021 | P | 631 | insHTstopRSKstopNSCYNA | 2 | 20210709 |
| EPI_ISL_18924423 | NSP3 | hCoV-19/South Korea/KDCA285566/2024 | P | 631 | Q | 12 | 20240130 |
| EPI_ISL_17500131 | NSP3 | hCoV-19/Chile/RM-29581/2023 | P | 631 | A | 10 | 20230407 |
| EPI_ISL_17821668 | NSP3 | hCoV-19/Brazil/RS-LMM74421/2023 | L | 632 | D | 4 | 20230417 |
| EPI_ISL_18287769 | NSP3 | hCoV-19/France/IDF-AphpSA-882305093166/2023 | L | 632 | W | 40 | 20230529 |
| EPI_ISL_18570569 | NSP3 | hCoV-19/USA/MS-MSPHL-0862/2023 | L | 632 | R | 8 | 20231116 |
| EPI_ISL_17625008 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000147522SP/2022 | L | 632 | insXX | 1 | 20220203 |
| EPI_ISL_14913845 | NSP3 | hCoV-19/USA/WA-UW-22081777937/2022 | L | 632 | M | 3 | 20220817 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | L | 632 | N | 7 | 20230404 |
| EPI_ISL_17821675 | NSP3 | hCoV-19/Brazil/RS-LMM74400/2023 | L | 632 | H | 143 | 20230414 |
| EPI_ISL_19363900 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14177/2024 | L | 632 | C | 7 | 20240601 |
| EPI_ISL_19185375 | NSP3 | hCoV-19/Japan/FR012-0128/2024 | L | 632 | V | 16 | 20240507 |
| EPI_ISL_19348701 | NSP3 | hCoV-19/Morocco/27/2020 | L | 632 | insD | 1 | 20201114 |
| EPI_ISL_19644778 | NSP3 | hCoV-19/Canada/NS-NSH-755840/2024 | L | 632 | I | 338 | 20241207 |
| EPI_ISL_18827746 | NSP3 | hCoV-19/USA/PA-CDC-LC1086812/2024 | L | 632 | J | 8 | 20240109 |
| EPI_ISL_11415717 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC84LAMS/2022 | L | 632 | Q | 1 | 20220131 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | L | 632 | P | 8 | 20230217 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 632 | del | 242 | 20250116 |
| EPI_ISL_18771586 | NSP3 | hCoV-19/Thailand/NIC_BKK_8374/2023 | L | 632 | K | 20 | 20231114 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | L | 632 | T | 9 | 20220726 |
| EPI_ISL_17821673 | NSP3 | hCoV-19/Brazil/RS-LMM74407/2023 | L | 632 | E | 19 | 20230415 |
| EPI_ISL_19032948 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6338/2024 | L | 632 | F | 116 | 20240120 |
| EPI_ISL_17500125 | NSP3 | hCoV-19/Chile/RM-29575/2023 | L | 632 | A | 6 | 20230405 |
| EPI_ISL_17479494 | NSP3 | hCoV-19/Thailand/NIC_BKK_1065/2023 | L | 632 | S | 13 | 20230314 |
| EPI_ISL_3543373 | NSP3 | hCoV-19/USA/ID-IBL-631356/2020 | G | 633 | insstop | 1 | 20200715 |
| EPI_ISL_18114324 | NSP3 | hCoV-19/Spain/GA-SCQ-161025/2023 | G | 633 | C | 15 | 20230409 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | G | 633 | del | 246 | 20250116 |
| EPI_ISL_17821632 | NSP3 | hCoV-19/Brazil/RS-LMM74550/2023 | G | 633 | S | 27 | 20230502 |
| EPI_ISL_18287769 | NSP3 | hCoV-19/France/IDF-AphpSA-882305093166/2023 | G | 633 | N | 41 | 20230529 |
| EPI_ISL_19290341 | NSP3 | hCoV-19/Honduras/CP-254/2024 | G | 633 | E | 1 | 20240506 |
| EPI_ISL_17479494 | NSP3 | hCoV-19/Thailand/NIC_BKK_1065/2023 | G | 633 | I | 2 | 20230314 |
| EPI_ISL_17821673 | NSP3 | hCoV-19/Brazil/RS-LMM74407/2023 | G | 633 | V | 20 | 20230415 |
| EPI_ISL_17821676 | NSP3 | hCoV-19/Brazil/RS-LMM74396/2023 | G | 633 | A | 77 | 20230424 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | G | 633 | insPKVKYL | 1 | 20220209 |
| EPI_ISL_18771586 | NSP3 | hCoV-19/Thailand/NIC_BKK_8374/2023 | G | 633 | P | 25 | 20231114 |
| EPI_ISL_11793564 | NSP3 | hCoV-19/India/KA-SEQ_14470_S331_R1_001/2022 | G | 633 | T | 5 | 20220215 |
| EPI_ISL_10753248 | NSP3 | hCoV-19/India/KA-SEQ_13806_S248_R1_001/2022 | G | 633 | K | 6 | 20220211 |
| EPI_ISL_19185375 | NSP3 | hCoV-19/Japan/FR012-0128/2024 | G | 633 | F | 13 | 20240507 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | G | 633 | W | 3 | 20220726 |
| EPI_ISL_19096095 | NSP3 | hCoV-19/Burkina Faso/CHUSS_6163/2020 | G | 633 | D | 3 | 20201231 |
| EPI_ISL_17785884 | NSP3 | hCoV-19/Thailand/NIC_PBI_4927/2023 | G | 633 | R | 9 | 20230515 |
| EPI_ISL_7832674 | NSP3 | hCoV-19/USA/ID-IBL-775587/2021 | G | 633 | insMstop | 1 | 20211205 |
| EPI_ISL_11415717 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC84LAMS/2022 | G | 633 | H | 2 | 20220131 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | G | 633 | L | 30 | 20230401 |
| EPI_ISL_17821636 | NSP3 | hCoV-19/Brazil/RS-LMM74544/2023 | G | 633 | Y | 3 | 20230429 |
| EPI_ISL_18226312 | NSP3 | hCoV-19/env/India/MH-FMR_D1-15a/2022 | Y | 634 | M | 10 | 20221010 |
| EPI_ISL_11823804 | NSP3 | hCoV-19/Pakistan/AKU-07/2022 | Y | 634 | T | 1 | 20220212 |
| EPI_ISL_17479494 | NSP3 | hCoV-19/Thailand/NIC_BKK_1065/2023 | Y | 634 | K | 5 | 20230314 |
| EPI_ISL_19363900 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14177/2024 | Y | 634 | stop | 9 | 20240601 |
| EPI_ISL_19150956 | NSP3 | hCoV-19/Australia/SA1475049/2024 | Y | 634 | H | 108 | 20240511 |
| EPI_ISL_12953128 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-MO02494786/2022 | Y | 634 | G | 3 | 20220429 |
| EPI_ISL_16985041 | NSP3 | hCoV-19/Germany/NI-IOV-1262923/2023 | Y | 634 | I | 13 | 20230109 |
| EPI_ISL_18771586 | NSP3 | hCoV-19/Thailand/NIC_BKK_8374/2023 | Y | 634 | C | 38 | 20231114 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 634 | del | 336 | 20250116 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | Y | 634 | insEQ | 4 | 20221121 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | Y | 634 | E | 2 | 20220818 |
| EPI_ISL_17201505 | NSP3 | hCoV-19/Chile/RM-15127/2023 | Y | 634 | R | 12 | 20230227 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Y | 634 | Q | 9 | 20230410 |
| EPI_ISL_17634714 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000295980SP/2022 | Y | 634 | insXX | 1 | 20220602 |
| EPI_ISL_17821636 | NSP3 | hCoV-19/Brazil/RS-LMM74544/2023 | Y | 634 | A | 2 | 20230429 |
| EPI_ISL_19781570 | NSP3 | hCoV-19/Italy/LIG-HSMGE1610/2025 | Y | 634 | S | 8 | 20250128 |
| EPI_ISL_17623936 | NSP3 | hCoV-19/Thailand/NIC_KKN_1864/2023 | Y | 634 | insXXX | 1 | 20230424 |
| EPI_ISL_17821667 | NSP3 | hCoV-19/Brazil/RS-LMM74422/2023 | Y | 634 | N | 17 | 20230417 |
| EPI_ISL_17785884 | NSP3 | hCoV-19/Thailand/NIC_PBI_4927/2023 | Y | 634 | V | 12 | 20230515 |
| EPI_ISL_17821690 | NSP3 | hCoV-19/Brazil/RS-LMM74192/2023 | Y | 634 | D | 5 | 20230322 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | Y | 634 | L | 37 | 20230401 |
| EPI_ISL_19290341 | NSP3 | hCoV-19/Honduras/CP-254/2024 | Y | 634 | F | 274 | 20240506 |
| EPI_ISL_11823815 | NSP3 | hCoV-19/Pakistan/AKU-19/2022 | Y | 634 | insR | 1 | 20220223 |
| EPI_ISL_10080774 | NSP3 | hCoV-19/India/KA-SEQ_9693_S28_R1_001/2022 | Y | 634 | W | 1 | 20220102 |
| EPI_ISL_17201505 | NSP3 | hCoV-19/Chile/RM-15127/2023 | V | 635 | Y | 7 | 20230227 |
| EPI_ISL_17821692 | NSP3 | hCoV-19/Brazil/RS-LMM74181/2023 | V | 635 | insXXX | 1 | 20230320 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 635 | C | 13 | 20250116 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | V | 635 | insP | 1 | 20210806 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 635 | Q | 23 | 20230404 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | V | 635 | M | 46 | 20220729 |
| EPI_ISL_19049362 | NSP3 | hCoV-19/Canada/QC-L00720293001/2024 | V | 635 | L | 81 | 20240324 |
| EPI_ISL_14513019 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_BDN6GWDG6UPAKFGA/2022 | V | 635 | E | 9 | 20220804 |
| EPI_ISL_18226312 | NSP3 | hCoV-19/env/India/MH-FMR_D1-15a/2022 | V | 635 | stop | 13 | 20221010 |
| EPI_ISL_10080774 | NSP3 | hCoV-19/India/KA-SEQ_9693_S28_R1_001/2022 | V | 635 | W | 1 | 20220102 |
| EPI_ISL_15932212 | NSP3 | hCoV-19/Mexico/CMX-INMEGEN-93-69/2022 | V | 635 | T | 5 | 20221107 |
| EPI_ISL_11795942 | NSP3 | hCoV-19/India/KA_14134_S336_R1_001/2022 | V | 635 | N | 5 | 20220220 |
| EPI_ISL_13633128 | NSP3 | hCoV-19/Sweden/03_SE600_500000052240SP/2022 | V | 635 | insXXXXXXX | 1 | 20220106 |
| EPI_ISL_19796742 | NSP3 | hCoV-19/England/CLIMB-CM7YGIE7/2025 | V | 635 | I | 3270 | 20250210 |
| EPI_ISL_19185375 | NSP3 | hCoV-19/Japan/FR012-0128/2024 | V | 635 | G | 37 | 20240507 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | V | 635 | F | 6 | 20221121 |
| EPI_ISL_19758881 | NSP3 | hCoV-19/Sweden/D-04_SE100_25CS500098/2025 | V | 635 | A | 166 | 20250122 |
| EPI_ISL_12610941 | NSP3 | hCoV-19/Pakistan/AKU-APR-R2-MIN-11/2022 | V | 635 | R | 3 | 20220307 |
| EPI_ISL_18226322 | NSP3 | hCoV-19/env/India/MH-FMR_B7-50a/2023 | V | 635 | S | 12 | 20230222 |
| EPI_ISL_17479492 | NSP3 | hCoV-19/Thailand/NIC_BKK_1059/2023 | V | 635 | P | 3 | 20230310 |
| EPI_ISL_19107684 | NSP3 | hCoV-19/Honduras/FM-198/2024 | V | 635 | del | 292 | 20240210 |
| EPI_ISL_17821693 | NSP3 | hCoV-19/Brazil/RS-LMM74158/2023 | V | 635 | K | 13 | 20230315 |
| EPI_ISL_18078723 | NSP3 | hCoV-19/Brazil/RJ-LBI-3004/2022 | T | 636 | insXXXXX | 1 | 20220606 |
| EPI_ISL_7832674 | NSP3 | hCoV-19/USA/ID-IBL-775587/2021 | T | 636 | insstopIWKKL | 1 | 20211205 |
| EPI_ISL_17466407 | NSP3 | hCoV-19/Chile/RM-26598/2023 | T | 636 | E | 12 | 20230328 |
| EPI_ISL_11795935 | NSP3 | hCoV-19/India/KA_14120_S358_R1_001/2022 | T | 636 | W | 8 | 20220220 |
| EPI_ISL_19539567 | NSP3 | hCoV-19/Turkey/DEU-S45/2020 | T | 636 | insHGLNLEEAARYMRSXXXXVTMPLGYVT | 1 | 20200821 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | T | 636 | P | 4 | 20220818 |
| EPI_ISL_16903239 | NSP3 | hCoV-19/England/QEUH-326BDFD9/2023 | T | 636 | K | 17 | 20230201 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 636 | Q | 4 | 20230404 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | T | 636 | C | 33 | 20230401 |
| EPI_ISL_19348701 | NSP3 | hCoV-19/Morocco/27/2020 | T | 636 | insTYH | 1 | 20201114 |
| EPI_ISL_19013977 | NSP3 | hCoV-19/Japan/7496037_S16/2023 | T | 636 | I | 14 | 20231105 |
| EPI_ISL_19130315 | NSP3 | hCoV-19/South Korea/KDCA292469/2024 | T | 636 | A | 27 | 20240415 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | T | 636 | H | 6 | 20210809 |
| EPI_ISL_14320645 | NSP3 | hCoV-19/Australia/SA431822/2022 | T | 636 | S | 40 | 20220728 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | T | 636 | stop | 47 | 20220729 |
| EPI_ISL_9305893 | NSP3 | hCoV-19/Brazil/SP-IB_147803/2022 | T | 636 | insXXX | 1 | 20220102 |
| EPI_ISL_18417853 | NSP3 | hCoV-19/Israel/SMC-7115700/2023 | T | 636 | N | 7 | 20231015 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | T | 636 | G | 4 | 20221224 |
| EPI_ISL_17785884 | NSP3 | hCoV-19/Thailand/NIC_PBI_4927/2023 | T | 636 | F | 4 | 20230515 |
| EPI_ISL_17821632 | NSP3 | hCoV-19/Brazil/RS-LMM74550/2023 | T | 636 | L | 14 | 20230502 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | T | 636 | Y | 1 | 20230217 |
| EPI_ISL_19290341 | NSP3 | hCoV-19/Honduras/CP-254/2024 | T | 636 | R | 7 | 20240506 |
| EPI_ISL_19185375 | NSP3 | hCoV-19/Japan/FR012-0128/2024 | T | 636 | V | 30 | 20240507 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | T | 636 | D | 5 | 20221011 |
| EPI_ISL_11795900 | NSP3 | hCoV-19/India/PY_13288_S127_R1_001/2022 | T | 636 | insXF | 1 | 20220213 |
| EPI_ISL_17201505 | NSP3 | hCoV-19/Chile/RM-15127/2023 | T | 636 | M | 5 | 20230227 |
| EPI_ISL_19107684 | NSP3 | hCoV-19/Honduras/FM-198/2024 | T | 636 | del | 297 | 20240210 |
| EPI_ISL_9476245 | NSP3 | hCoV-19/Brazil/SP-IB_149615/2022 | T | 636 | insTWNAstopKTWVRSCSPstop | 1 | 20220120 |
| EPI_ISL_19290341 | NSP3 | hCoV-19/Honduras/CP-254/2024 | H | 637 | N | 18 | 20240506 |
| EPI_ISL_17201505 | NSP3 | hCoV-19/Chile/RM-15127/2023 | H | 637 | R | 15 | 20230227 |
| EPI_ISL_19107684 | NSP3 | hCoV-19/Honduras/FM-198/2024 | H | 637 | del | 292 | 20240210 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | H | 637 | P | 5 | 20230116 |
| EPI_ISL_18052799 | NSP3 | hCoV-19/India/MH-ICMR-NIV-233545/2023 | H | 637 | insE | 1 | 20230701 |
| EPI_ISL_18417853 | NSP3 | hCoV-19/Israel/SMC-7115700/2023 | H | 637 | M | 8 | 20231015 |
| EPI_ISL_13165745 | NSP3 | hCoV-19/Chile/RM-67992/2022 | H | 637 | insXXXXXX | 1 | 20220522 |
| EPI_ISL_3794921 | NSP3 | hCoV-19/Sweden/2A40874730099/2021 | H | 637 | insLAMstopHMAstopIWKKLL | 2 | 20210414 |
| EPI_ISL_13392868 | NSP3 | hCoV-19/USA/KS-KSU-2786/2022 | H | 637 | F | 10 | 20220607 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | H | 637 | T | 8 | 20230404 |
| EPI_ISL_9203680 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-74435/2022 | H | 637 | D | 2 | 20220103 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | H | 637 | insLAMstopHM | 1 | 20210805 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | H | 637 | K | 18 | 20230217 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | H | 637 | insVAKF | 1 | 20210802 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | H | 637 | insMAstopIWKKLL | 36 | 20210419 |
| EPI_ISL_12953261 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-1872/2022 | H | 637 | stop | 1 | 20220510 |
| EPI_ISL_16970239 | NSP3 | hCoV-19/Sichuan/ZYCDC-230038/2023 | H | 637 | Y | 21 | 20230207 |
| EPI_ISL_12953254 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-1865/2022 | H | 637 | W | 8 | 20220509 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | H | 637 | I | 7 | 20221011 |
| EPI_ISL_13726210 | NSP3 | hCoV-19/Chile/RM-71736/2022 | H | 637 | insXX | 1 | 20220607 |
| EPI_ISL_19781259 | NSP3 | hCoV-19/Italy/VEN-IZSVe-25RS8006-7_VE/2025 | H | 637 | Q | 23 | 20250219 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | H | 637 | A | 1 | 20210809 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | H | 637 | L | 7 | 20230217 |
| EPI_ISL_17466407 | NSP3 | hCoV-19/Chile/RM-26598/2023 | H | 637 | E | 5 | 20230328 |
| EPI_ISL_19185375 | NSP3 | hCoV-19/Japan/FR012-0128/2024 | H | 637 | S | 39 | 20240507 |
| EPI_ISL_10753325 | NSP3 | hCoV-19/India/KA-SEQ_13716_S213_R1_001/2022 | H | 637 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYVTH | 1 | 20220201 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | H | 637 | C | 3 | 20250116 |
| EPI_ISL_10753248 | NSP3 | hCoV-19/India/KA-SEQ_13806_S248_R1_001/2022 | H | 637 | G | 2 | 20220211 |
| EPI_ISL_17479492 | NSP3 | hCoV-19/Thailand/NIC_BKK_1059/2023 | G | 638 | L | 10 | 20230310 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | G | 638 | insAstopIWKKL | 2 | 20210508 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | G | 638 | W | 10 | 20230302 |
| EPI_ISL_19107684 | NSP3 | hCoV-19/Honduras/FM-198/2024 | G | 638 | del | 323 | 20240210 |
| EPI_ISL_18981360 | NSP3 | hCoV-19/USA/TX-HMH-M-139815/2024 | G | 638 | V | 17 | 20240220 |
| EPI_ISL_17238814 | NSP3 | hCoV-19/Italy/CAM-90390374434_IZSM_COLLI_TIGEM/2023 | G | 638 | R | 13 | 20230224 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | G | 638 | insstopIWKKL | 5 | 20210809 |
| EPI_ISL_17722345 | NSP3 | hCoV-19/Malaysia/MGVI_GU0935/2023 | G | 638 | F | 29 | 20230320 |
| EPI_ISL_15334466 | NSP3 | hCoV-19/Chile/RM-113823/2022 | G | 638 | M | 10 | 20220925 |
| EPI_ISL_17425390 | NSP3 | hCoV-19/Japan/PG-468008/2023 | G | 638 | C | 69 | 20230329 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | G | 638 | P | 1 | 20210823 |
| EPI_ISL_12166975 | NSP3 | hCoV-19/USA/ID-IBL-813567/2022 | G | 638 | K | 5 | 20220411 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | G | 638 | stop | 5 | 20220628 |
| EPI_ISL_19816606 | NSP3 | hCoV-19/South Korea/KDCA297231/2025 | G | 638 | D | 180 | 20250223 |
| EPI_ISL_16377412 | NSP3 | hCoV-19/Tunisia/S-2881/2022 | G | 638 | H | 1 | 20220406 |
| EPI_ISL_19290341 | NSP3 | hCoV-19/Honduras/CP-254/2024 | G | 638 | A | 58 | 20240506 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | G | 638 | insstopIstopRSCSV | 2 | 20221228 |
| EPI_ISL_19093609 | NSP3 | hCoV-19/USA/WA-GBW-GKISBBBB54156/2024 | G | 638 | S | 225 | 20240424 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | G | 638 | E | 3 | 20230217 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | G | 638 | N | 7 | 20221011 |
| EPI_ISL_10729428 | NSP3 | hCoV-19/India/KA-SEQ_12863_S101_R1_001/2022 | G | 638 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPT | 1 | 20220209 |
| EPI_ISL_17299956 | NSP3 | hCoV-19/Chile/RM-23517/2023 | G | 638 | insE | 6 | 20230319 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | G | 638 | T | 4 | 20230404 |
| EPI_ISL_11793434 | NSP3 | hCoV-19/India/KA-SEQ_14188_S49_R1_001/2022 | G | 638 | Y | 1 | 20220212 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | L | 639 | G | 7 | 20221011 |
| EPI_ISL_18350912 | NSP3 | hCoV-19/USA/MS-MSPHL-0687/2023 | L | 639 | V | 25 | 20230912 |
| EPI_ISL_17500130 | NSP3 | hCoV-19/Chile/RM-29580/2023 | L | 639 | E | 16 | 20230407 |
| EPI_ISL_19185375 | NSP3 | hCoV-19/Japan/FR012-0128/2024 | L | 639 | S | 71 | 20240507 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 639 | N | 3 | 20220210 |
| EPI_ISL_16650184 | NSP3 | hCoV-19/Chile/RM-2975/2023 | L | 639 | A | 23 | 20230111 |
| EPI_ISL_16889462 | NSP3 | hCoV-19/Mexico/CMX_InDRE_S15887/2023 | L | 639 | stop | 37 | 20230117 |
| EPI_ISL_17634807 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000103350SP/2022 | L | 639 | insXXX | 3 | 20220519 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 639 | Y | 22 | 20230410 |
| EPI_ISL_10080774 | NSP3 | hCoV-19/India/KA-SEQ_9693_S28_R1_001/2022 | L | 639 | insHA | 1 | 20220102 |
| EPI_ISL_17624769 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000194885SP/2022 | L | 639 | insXXXX | 2 | 20220210 |
| EPI_ISL_18371179 | NSP3 | hCoV-19/Turkey/HSGM-AA00630/2023 | L | 639 | J | 31 | 20230917 |
| EPI_ISL_12610939 | NSP3 | hCoV-19/Pakistan/AKU-APR-R2-MIN-07/2022 | L | 639 | P | 3 | 20220317 |
| EPI_ISL_18371181 | NSP3 | hCoV-19/Turkey/HSGM-AA00633/2023 | L | 639 | I | 69 | 20230916 |
| EPI_ISL_18927535 | NSP3 | hCoV-19/USA/TX-HMH-M-139132/2024 | L | 639 | F | 65 | 20240208 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 639 | del | 322 | 20250116 |
| EPI_ISL_15334466 | NSP3 | hCoV-19/Chile/RM-113823/2022 | L | 639 | R | 11 | 20220925 |
| EPI_ISL_17260607 | NSP3 | hCoV-19/USA/ID-IBL-877838/2023 | L | 639 | D | 3 | 20230222 |
| EPI_ISL_17201525 | NSP3 | hCoV-19/Chile/AI-18335/2023 | L | 639 | W | 2 | 20230227 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | L | 639 | Q | 3 | 20230217 |
| EPI_ISL_19290341 | NSP3 | hCoV-19/Honduras/CP-254/2024 | L | 639 | C | 1 | 20240506 |
| EPI_ISL_7832674 | NSP3 | hCoV-19/USA/ID-IBL-775587/2021 | L | 639 | insstop | 3 | 20211205 |
| EPI_ISL_17709036 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200401928N2/2022 | L | 639 | insXX | 6 | 20220505 |
| EPI_ISL_12166975 | NSP3 | hCoV-19/USA/ID-IBL-813567/2022 | L | 639 | K | 2 | 20220411 |
| EPI_ISL_18078626 | NSP3 | hCoV-19/Brazil/MG-LBI-3356/2022 | L | 639 | insXXVSFS | 1 | 20220805 |
| EPI_ISL_17474696 | NSP3 | hCoV-19/Pakistan/BATCH-02-SAMPLE23/2023 | L | 639 | T | 9 | 20230213 |
| EPI_ISL_3178829 | NSP3 | hCoV-19/England/OXON-FA5DCB/2021 | L | 639 | M | 3 | 20210717 |
| EPI_ISL_16814945 | NSP3 | hCoV-19/United Arab Emirates/BTC-6086/2021 | L | 639 | insLGIstop | 1 | 20210626 |
| EPI_ISL_13307929 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2183/2022 | L | 639 | H | 2 | 20220528 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | L | 639 | insstopDLSKC | 37 | 20210419 |
| EPI_ISL_13079013 | NSP3 | hCoV-19/India/MH-INSACOG-IP12225/2022 | L | 639 | insXXXXXXXXXX | 3 | 20220513 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | N | 640 | Y | 6 | 20221224 |
| EPI_ISL_19632977 | NSP3 | hCoV-19/England/CLIMB-CM7YRPAB/2024 | N | 640 | B | 14 | 20241206 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | N | 640 | P | 3 | 20230116 |
| EPI_ISL_19422830 | NSP3 | hCoV-19/USA/TN-UM-L8531536274181/2024 | N | 640 | K | 60 | 20240820 |
| EPI_ISL_17238827 | NSP3 | hCoV-19/Italy/CAM-90390374218_IZSM_COLLI_TIGEM/2023 | N | 640 | Z | 1 | 20230222 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | N | 640 | L | 6 | 20230217 |
| EPI_ISL_17623936 | NSP3 | hCoV-19/Thailand/NIC_KKN_1864/2023 | N | 640 | H | 17 | 20230424 |
| EPI_ISL_15416615 | NSP3 | hCoV-19/USA/ID-IBL-854417/2022 | N | 640 | I | 16 | 20220914 |
| EPI_ISL_13988803 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-3009/2022 | N | 640 | C | 6 | 20220624 |
| EPI_ISL_9713901 | NSP3 | hCoV-19/India/MH-RFIP08366/2022 | N | 640 | insXXXXXXXXXX | 1 | 20220107 |
| EPI_ISL_14861690 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12258/2022 | N | 640 | V | 4 | 20220806 |
| EPI_ISL_17500140 | NSP3 | hCoV-19/Chile/AN-29740/2023 | N | 640 | E | 25 | 20230408 |
| EPI_ISL_19744463 | NSP3 | hCoV-19/Austria/AGES-1101448/2024 | N | 640 | S | 472 | 20241216 |
| EPI_ISL_16355925 | NSP3 | hCoV-19/Thailand/OTV114_P3_PR/2022 | N | 640 | G | 12 | 20220504 |
| EPI_ISL_19590187 | NSP3 | hCoV-19/Georgia/Tb-s8281/2024 | N | 640 | T | 247 | 20241011 |
| EPI_ISL_11795918 | NSP3 | hCoV-19/India/KA_14092_S307_R1_001/2022 | N | 640 | F | 13 | 20220220 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | N | 640 | insNLNRGMV | 1 | 20220209 |
| EPI_ISL_17238819 | NSP3 | hCoV-19/Italy/CAM-90901446364_IZSM_COLLI_TIGEM/2023 | N | 640 | stop | 10 | 20230219 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | N | 640 | Q | 44 | 20221121 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | N | 640 | del | 314 | 20250116 |
| EPI_ISL_17275345 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45871/2023 | N | 640 | R | 8 | 20230217 |
| EPI_ISL_11793415 | NSP3 | hCoV-19/India/KA-SEQ_14149_S10_R1_001/2022 | N | 640 | insFST | 2 | 20220216 |
| EPI_ISL_3775843 | NSP3 | hCoV-19/England/PHEC-T308T366/2021 | N | 640 | M | 2 | 20210816 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | N | 640 | A | 17 | 20230401 |
| EPI_ISL_19821887 | NSP3 | hCoV-19/USA/SC-CDC-LC1136368/2025 | N | 640 | D | 120 | 20250326 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | L | 641 | G | 4 | 20230404 |
| EPI_ISL_18411081 | NSP3 | hCoV-19/South Korea/KDCA268055/2023 | L | 641 | M | 41 | 20230912 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | L | 641 | insG | 1 | 20210805 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | L | 641 | insKF | 1 | 20230302 |
| EPI_ISL_17785884 | NSP3 | hCoV-19/Thailand/NIC_PBI_4927/2023 | L | 641 | insSXX | 1 | 20230515 |
| EPI_ISL_18537922 | NSP3 | hCoV-19/Italy/ABR-IZSGC-25401/2023 | L | 641 | V | 635 | 20231117 |
| EPI_ISL_19363861 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14068/2024 | L | 641 | K | 2 | 20240403 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | L | 641 | insE | 1 | 20210818 |
| EPI_ISL_17623936 | NSP3 | hCoV-19/Thailand/NIC_KKN_1864/2023 | L | 641 | E | 2 | 20230424 |
| EPI_ISL_15316375 | NSP3 | hCoV-19/India/KA-ICMR-INSACOG-VRDL-MYS-APOLLO-70883/2022 | L | 641 | S | 8 | 20220908 |
| EPI_ISL_16650184 | NSP3 | hCoV-19/Chile/RM-2975/2023 | L | 641 | Y | 4 | 20230111 |
| EPI_ISL_19499220 | NSP3 | hCoV-19/USA/TX-HMH-M-146597/2024 | L | 641 | F | 256 | 20240929 |
| EPI_ISL_17084098 | NSP3 | hCoV-19/Chile/MA-12077/2023 | L | 641 | A | 21 | 20230214 |
| EPI_ISL_13847339 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2884/2022 | L | 641 | Q | 1 | 20220615 |
| EPI_ISL_17430583 | NSP3 | hCoV-19/Dominican Republic/ 2134207-LNSPDD/2023 | L | 641 | T | 5 | 20230228 |
| EPI_ISL_17275345 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45871/2023 | L | 641 | insCV | 1 | 20230217 |
| EPI_ISL_11795908 | NSP3 | hCoV-19/India/KA_14066_S177_R1_001/2022 | L | 641 | insSTF | 3 | 20220220 |
| EPI_ISL_16137538 | NSP3 | hCoV-19/USA/ID-IBL-867299/2022 | L | 641 | insPCTCG | 4 | 20221121 |
| EPI_ISL_19290341 | NSP3 | hCoV-19/Honduras/CP-254/2024 | L | 641 | C | 6 | 20240506 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 641 | del | 307 | 20250116 |
| EPI_ISL_18301840 | NSP3 | hCoV-19/Italy/LOM-69468825/2023 | L | 641 | W | 9 | 20230913 |
| EPI_ISL_16027181 | NSP3 | hCoV-19/Indonesia/JI-ITD-59113NT/2022 | L | 641 | stop | 3 | 20221027 |
| EPI_ISL_10729398 | NSP3 | hCoV-19/India/KA-SEQ_12872_S114_R1_001/2022 | L | 641 | insXXX | 1 | 20220209 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | L | 641 | I | 39 | 20230302 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | E | 642 | L | 5 | 20221224 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | E | 642 | del | 294 | 20230815 |
| EPI_ISL_18226322 | NSP3 | hCoV-19/env/India/MH-FMR_B7-50a/2023 | E | 642 | S | 16 | 20230222 |
| EPI_ISL_19824332 | NSP3 | hCoV-19/Mexico/CMX-INER-INMEGEN-3162/2024 | E | 642 | D | 187 | 20241001 |
| EPI_ISL_17201505 | NSP3 | hCoV-19/Chile/RM-15127/2023 | E | 642 | P | 5 | 20230227 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | E | 642 | stop | 32 | 20230401 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | E | 642 | I | 3 | 20230217 |
| EPI_ISL_16355925 | NSP3 | hCoV-19/Thailand/OTV114_P3_PR/2022 | E | 642 | C | 8 | 20220504 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | E | 642 | V | 15 | 20230404 |
| EPI_ISL_17182439 | NSP3 | hCoV-19/England/BRBR-326F37B1/2023 | E | 642 | Z | 17 | 20230302 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | E | 642 | T | 3 | 20230116 |
| EPI_ISL_19479459 | NSP3 | hCoV-19/Mexico/PUE_InDRE_FB1498/2024 | E | 642 | A | 163 | 20240724 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | E | 642 | insL | 1 | 20220602 |
| EPI_ISL_17349847 | NSP3 | hCoV-19/Chile/AR-23415/2023 | E | 642 | H | 7 | 20230314 |
| EPI_ISL_18717183 | NSP3 | hCoV-19/France/BRE-IPP31200/2023 | E | 642 | G | 82 | 20231204 |
| EPI_ISL_9533378 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-338043/2022 | E | 642 | N | 5 | 20220127 |
| EPI_ISL_10523373 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-348059/2022 | E | 642 | Y | 5 | 20220214 |
| EPI_ISL_17430583 | NSP3 | hCoV-19/Dominican Republic/ 2134207-LNSPDD/2023 | E | 642 | Q | 53 | 20230228 |
| EPI_ISL_19764114 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56474/2025 | E | 642 | K | 400 | 20250214 |
| EPI_ISL_19290341 | NSP3 | hCoV-19/Honduras/CP-254/2024 | E | 642 | R | 4 | 20240506 |
| EPI_ISL_16650184 | NSP3 | hCoV-19/Chile/RM-2975/2023 | E | 642 | M | 3 | 20230111 |
| EPI_ISL_19363861 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14068/2024 | E | 642 | W | 6 | 20240403 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | E | 642 | insP | 5 | 20221011 |
| EPI_ISL_17430583 | NSP3 | hCoV-19/Dominican Republic/ 2134207-LNSPDD/2023 | E | 643 | I | 10 | 20230228 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | E | 643 | F | 37 | 20210419 |
| EPI_ISL_19829607 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022770_01/2025 | E | 643 | A | 26 | 20250304 |
| EPI_ISL_19364014 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14145/2024 | E | 643 | K | 76 | 20240501 |
| EPI_ISL_18335038 | NSP3 | hCoV-19/Chile/MA-63546/2023 | E | 643 | del | 281 | 20230815 |
| EPI_ISL_16003890 | NSP3 | hCoV-19/Cambodia/22024756/2022 | E | 643 | Z | 4 | 20221113 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | E | 643 | L | 3 | 20221226 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | E | 643 | insLLGIstopDL | 1 | 20220105 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | E | 643 | P | 2 | 20230217 |
| EPI_ISL_19363861 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14068/2024 | E | 643 | stop | 13 | 20240403 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | E | 643 | H | 16 | 20230401 |
| EPI_ISL_19290341 | NSP3 | hCoV-19/Honduras/CP-254/2024 | E | 643 | R | 14 | 20240506 |
| EPI_ISL_11793441 | NSP3 | hCoV-19/India/KA-SEQ_14205_S66_R1_001/2022 | E | 643 | N | 5 | 20220214 |
| EPI_ISL_10753248 | NSP3 | hCoV-19/India/KA-SEQ_13806_S248_R1_001/2022 | E | 643 | M | 4 | 20220211 |
| EPI_ISL_19363893 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14153/2024 | E | 643 | S | 5 | 20240401 |
| EPI_ISL_17084130 | NSP3 | hCoV-19/Chile/LI-11957/2023 | E | 643 | insXXXX | 4 | 20230211 |
| EPI_ISL_15792260 | NSP3 | hCoV-19/Chile/RM-123521/2022 | E | 643 | insXXX | 5 | 20221026 |
| EPI_ISL_17275345 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45871/2023 | E | 643 | T | 8 | 20230217 |
| EPI_ISL_13847336 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2928/2022 | E | 643 | Y | 2 | 20220623 |
| EPI_ISL_19633240 | NSP3 | hCoV-19/France/IDF-RELAB-IPP13946/2024 | E | 643 | G | 108 | 20241125 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | E | 643 | V | 4 | 20230116 |
| EPI_ISL_10749102 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC5815/2022 | E | 643 | insVPLE | 1 | 20220204 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 643 | Q | 45 | 20250116 |
| EPI_ISL_4530142 | NSP3 | hCoV-19/England/PHEC-3G06FGEC/2021 | E | 643 | insEWL | 1 | 20210919 |
| EPI_ISL_19145976 | NSP3 | hCoV-19/Japan/FR046-0018/2024 | E | 643 | D | 143 | 20240219 |
| EPI_ISL_9476245 | NSP3 | hCoV-19/Brazil/SP-IB_149615/2022 | E | 643 | insRKPGLG | 1 | 20220120 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | A | 644 | M | 18 | 20230401 |
| EPI_ISL_17797779 | NSP3 | hCoV-19/USA/NC-UNC-9467/2023 | A | 644 | V | 40 | 20230603 |
| EPI_ISL_11522617 | NSP3 | hCoV-19/Gabon/V0846/2020 | A | 644 | insLGIstopDLSKCQLQFLF | 1 | 20201218 |
| EPI_ISL_17349847 | NSP3 | hCoV-19/Chile/AR-23415/2023 | A | 644 | E | 1 | 20230314 |
| EPI_ISL_10924499 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11812/2022 | A | 644 | Q | 5 | 20220228 |
| EPI_ISL_19334632 | NSP3 | hCoV-19/Egypt/CPHL-EGY24154/2024 | A | 644 | D | 3 | 20240625 |
| EPI_ISL_15334466 | NSP3 | hCoV-19/Chile/RM-113823/2022 | A | 644 | P | 2 | 20220925 |
| EPI_ISL_13864718 | NSP3 | hCoV-19/Chile/RM-84066/2022 | A | 644 | Y | 2 | 20220704 |
| EPI_ISL_16355925 | NSP3 | hCoV-19/Thailand/OTV114_P3_PR/2022 | A | 644 | K | 7 | 20220504 |
| EPI_ISL_19052422 | NSP3 | hCoV-19/USA/CA-SEARCH-230632/2023 | A | 644 | del | 126 | 20231013 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | A | 644 | W | 3 | 20200807 |
| EPI_ISL_13346758 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2349/2022 | A | 644 | I | 3 | 20220530 |
| EPI_ISL_14038129 | NSP3 | hCoV-19/Chile/BI-86877/2022 | A | 644 | insXXXXXX | 1 | 20220712 |
| EPI_ISL_9305830 | NSP3 | hCoV-19/Brazil/SP-IB_147740/2022 | A | 644 | insXXX | 2 | 20220104 |
| EPI_ISL_12582700 | NSP3 | hCoV-19/Turkey/HSGM-GS2015/2022 | A | 644 | N | 3 | 20220401 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | A | 644 | stop | 1 | 20210521 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | A | 644 | L | 59 | 20230217 |
| EPI_ISL_14588255 | NSP3 | hCoV-19/USA/ID-IBL-844143/2022 | A | 644 | C | 7 | 20220808 |
| EPI_ISL_19031257 | NSP3 | hCoV-19/South Korea/KDCA289531/2024 | A | 644 | T | 190 | 20240312 |
| EPI_ISL_11071002 | NSP3 | hCoV-19/Greece/332912/2022 | A | 644 | insH | 1 | 20220215 |
| EPI_ISL_19363959 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14191/2024 | A | 644 | G | 6 | 20240619 |
| EPI_ISL_3760031 | NSP3 | hCoV-19/USA/ID-IBL-747327/2021 | A | 644 | insCFP | 1 | 20210805 |
| EPI_ISL_14817757 | NSP3 | hCoV-19/Chile/AR-102113/2022 | A | 644 | insXXXX | 2 | 20220820 |
| EPI_ISL_16744868 | NSP3 | hCoV-19/Chile/AN-720/2023 | A | 644 | insXX | 3 | 20230104 |
| EPI_ISL_19718813 | NSP3 | hCoV-19/Hong Kong/VB25035420/2025 | A | 644 | S | 961 | 20250127 |
| EPI_ISL_10943991 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8799/2022 | A | 644 | F | 2 | 20220208 |
| EPI_ISL_11793450 | NSP3 | hCoV-19/India/KA-SEQ_14220_S81_R1_001/2022 | A | 644 | R | 7 | 20220215 |
| EPI_ISL_13988930 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-3120/2022 | A | 645 | stop | 3 | 20220629 |
| EPI_ISL_11333322 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-34/2022 | A | 645 | E | 2 | 20220205 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | A | 645 | insWLCNTWL | 1 | 20210414 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | A | 645 | V | 85 | 20230404 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | A | 645 | H | 3 | 20220725 |
| EPI_ISL_13864718 | NSP3 | hCoV-19/Chile/RM-84066/2022 | A | 645 | M | 5 | 20220704 |
| EPI_ISL_14217620 | NSP3 | hCoV-19/Austria/LB-R00092-S297/2022 | A | 645 | P | 9 | 20220726 |
| EPI_ISL_13847236 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2791/2022 | A | 645 | Y | 2 | 20220618 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | A | 645 | C | 10 | 20221201 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | A | 645 | insTVLKKCKSAFYILPSIISN | 1 | 20230217 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | A | 645 | F | 38 | 20210419 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | A | 645 | K | 11 | 20230410 |
| EPI_ISL_10729477 | NSP3 | hCoV-19/India/KA-SEQ_12741_S49_R1_001/2022 | A | 645 | insRYMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIISVKWWSRSLEEAA | 1 | 20220212 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | A | 645 | I | 2 | 20210806 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 645 | T | 32 | 20250116 |
| EPI_ISL_19348696 | NSP3 | hCoV-19/Morocco/22/2020 | A | 645 | N | 1 | 20201101 |
| EPI_ISL_19484558 | NSP3 | hCoV-19/USA/IA-SHL-2509019/2024 | A | 645 | S | 151 | 20240918 |
| EPI_ISL_19812669 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20750/2024 | A | 645 | del | 94 | 20241002 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | A | 645 | Q | 4 | 20211230 |
| EPI_ISL_16744045 | NSP3 | hCoV-19/Chile/AR-5082/2023 | A | 645 | insXXXXXX | 1 | 20230117 |
| EPI_ISL_17275345 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45871/2023 | A | 645 | R | 3 | 20230217 |
| EPI_ISL_18575082 | NSP3 | hCoV-19/Italy/SIC-AOUME-UOSD-GCL-4666/2022 | A | 645 | D | 11 | 20220330 |
| EPI_ISL_13988812 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-3058/2022 | A | 645 | G | 2 | 20220627 |
| EPI_ISL_17201525 | NSP3 | hCoV-19/Chile/AI-18335/2023 | A | 645 | L | 37 | 20230227 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | A | 645 | insYNATWLCN | 1 | 20210802 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | R | 646 | F | 1 | 20210806 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | R | 646 | C | 4 | 20220105 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | R | 646 | E | 3 | 20230217 |
| EPI_ISL_19496774 | NSP3 | hCoV-19/Canada/AB-ABPHL-123942/2024 | R | 646 | L | 578 | 20240927 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | R | 646 | stop | 17 | 20230401 |
| EPI_ISL_11071002 | NSP3 | hCoV-19/Greece/332912/2022 | R | 646 | N | 1 | 20220215 |
| EPI_ISL_3760031 | NSP3 | hCoV-19/USA/ID-IBL-747327/2021 | R | 646 | Y | 1 | 20210805 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | R | 646 | del | 86 | 20230605 |
| EPI_ISL_15855344 | NSP3 | hCoV-19/Chile/AT-125258/2022 | R | 646 | insXXXXXX | 1 | 20220929 |
| EPI_ISL_14881063 | NSP3 | hCoV-19/USA/ID-IBL-846239/2022 | R | 646 | insIstopDLSKC | 1 | 20220816 |
| EPI_ISL_18226322 | NSP3 | hCoV-19/env/India/MH-FMR_B7-50a/2023 | R | 646 | S | 23 | 20230222 |
| EPI_ISL_19552901 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08894/2024 | R | 646 | G | 37 | 20241028 |
| EPI_ISL_11793467 | NSP3 | hCoV-19/India/KA-SEQ_14248_S109_R1_001/2022 | R | 646 | I | 16 | 20220217 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | R | 646 | P | 4 | 20220818 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | R | 646 | T | 16 | 20230410 |
| EPI_ISL_9476293 | NSP3 | hCoV-19/Brazil/SP-IB_149979/2022 | R | 646 | insYMRSLKVPATVVLLVstopKstopNLAPstopSTTPSCILIPL | 1 | 20220111 |
| EPI_ISL_19816801 | NSP3 | hCoV-19/Slovenia/IMI-V0-1824/2025 | R | 646 | Q | 2176 | 20250317 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | R | 646 | K | 26 | 20250116 |
| EPI_ISL_17201584 | NSP3 | hCoV-19/Chile/RM-19691/2023 | R | 646 | insXXX | 1 | 20230306 |
| EPI_ISL_7639550 | NSP3 | hCoV-19/Greece/312294/2021 | R | 646 | insNA | 1 | 20211201 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | R | 646 | M | 2 | 20230404 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | R | 646 | H | 6 | 20210919 |
| EPI_ISL_5383732 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-64489/2021 | R | 646 | V | 2 | 20210921 |
| EPI_ISL_2383071 | NSP3 | hCoV-19/USA/AZ-ASPHL-427/2020 | R | 646 | insCWC | 1 | 20200427 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | R | 646 | insC | 1 | 20210809 |
| EPI_ISL_19797809 | NSP3 | hCoV-19/Brazil/MG-LACENMG-312305721/2025 | R | 646 | W | 4043 | 20250305 |
| EPI_ISL_17201525 | NSP3 | hCoV-19/Chile/AI-18335/2023 | R | 646 | A | 5 | 20230227 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | Y | 647 | I | 21 | 20230401 |
| EPI_ISL_19820168 | NSP3 | hCoV-19/USA/NY-PRL-250401_82B06/2025 | Y | 647 | C | 5515 | 20250323 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | Y | 647 | T | 1 | 20220209 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | Y | 647 | K | 2 | 20220628 |
| EPI_ISL_15629100 | NSP3 | hCoV-19/Scotland/LSPA-325C426E/2022 | Y | 647 | S | 10 | 20221019 |
| EPI_ISL_19363893 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14153/2024 | Y | 647 | G | 6 | 20240401 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Y | 647 | V | 41 | 20230410 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | Y | 647 | L | 11 | 20240227 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | Y | 647 | del | 76 | 20230605 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | Y | 647 | Q | 10 | 20230406 |
| EPI_ISL_19326935 | NSP3 | hCoV-19/Wales/CLIMB-CM7YKDZQ/2024 | Y | 647 | F | 49 | 20240729 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | Y | 647 | W | 5 | 20220725 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | Y | 647 | N | 8 | 20230116 |
| EPI_ISL_18597344 | NSP3 | hCoV-19/South Korea/KDCA275780/2023 | Y | 647 | D | 2 | 20231111 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 647 | E | 5 | 20230217 |
| EPI_ISL_19610954 | NSP3 | hCoV-19/Hungary/102360-UPL24-005091/2024 | Y | 647 | H | 205 | 20241021 |
| EPI_ISL_10753248 | NSP3 | hCoV-19/India/KA-SEQ_13806_S248_R1_001/2022 | Y | 647 | A | 3 | 20220211 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | Y | 647 | insSFC | 1 | 20211012 |
| EPI_ISL_11326419 | NSP3 | hCoV-19/France/IDF-ChVe-21465903/2021 | Y | 647 | stop | 4 | 20211120 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | M | 648 | Y | 2 | 20211230 |
| EPI_ISL_2131569 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-3360/2021 | M | 648 | H | 2 | 20210503 |
| EPI_ISL_18518995 | NSP3 | hCoV-19/USA/IL-RIPHL_160455_G/2023 | M | 648 | V | 15 | 20231016 |
| EPI_ISL_11294820 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-8/2022 | M | 648 | C | 3 | 20220209 |
| EPI_ISL_10924346 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11659/2022 | M | 648 | insF | 1 | 20220226 |
| EPI_ISL_19769512 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00077/2022 | M | 648 | K | 5 | 20221119 |
| EPI_ISL_19610852 | NSP3 | hCoV-19/South Korea/KDCA296509/2024 | M | 648 | T | 37 | 20241118 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | M | 648 | E | 3 | 20240801 |
| EPI_ISL_17530370 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13994/2023 | M | 648 | G | 11 | 20230315 |
| EPI_ISL_10858573 | NSP3 | hCoV-19/Turkey/HSGM-G2531/2022 | M | 648 | R | 3 | 20220217 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | M | 648 | insGTLSYEQFK | 1 | 20230404 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | M | 648 | del | 66 | 20230605 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 648 | Q | 8 | 20220210 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | M | 648 | W | 16 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | M | 648 | D | 1 | 20221226 |
| EPI_ISL_18226322 | NSP3 | hCoV-19/env/India/MH-FMR_B7-50a/2023 | M | 648 | S | 12 | 20230222 |
| EPI_ISL_13044587 | NSP3 | hCoV-19/USA/ID-IBL-822052/2022 | M | 648 | stop | 3 | 20220523 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | M | 648 | F | 5 | 20220725 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | M | 648 | L | 96 | 20250116 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | M | 648 | I | 21 | 20220818 |
| EPI_ISL_16650184 | NSP3 | hCoV-19/Chile/RM-2975/2023 | M | 648 | P | 3 | 20230111 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | M | 648 | N | 2 | 20210805 |
| EPI_ISL_18226322 | NSP3 | hCoV-19/env/India/MH-FMR_B7-50a/2023 | R | 649 | F | 12 | 20230222 |
| EPI_ISL_19769512 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00077/2022 | R | 649 | N | 3 | 20221119 |
| EPI_ISL_19212598 | NSP3 | hCoV-19/env/India/MH-NCL-237-05/2023 | R | 649 | T | 21 | 20231205 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | R | 649 | V | 7 | 20250116 |
| EPI_ISL_9047505 | NSP3 | hCoV-19/Egypt/CPHL-EGY21155/2021 | R | 649 | insCLLYT | 1 | 20211204 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | R | 649 | del | 59 | 20230605 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | R | 649 | C | 3 | 20211122 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | R | 649 | E | 3 | 20221024 |
| EPI_ISL_19784416 | NSP3 | hCoV-19/New Zealand/25YA0680/2025 | R | 649 | K | 1610 | 20250303 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | R | 649 | D | 3 | 20230116 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | R | 649 | M | 38 | 20221226 |
| EPI_ISL_16650184 | NSP3 | hCoV-19/Chile/RM-2975/2023 | R | 649 | A | 5 | 20230111 |
| EPI_ISL_12166975 | NSP3 | hCoV-19/USA/ID-IBL-813567/2022 | R | 649 | L | 16 | 20220411 |
| EPI_ISL_11793423 | NSP3 | hCoV-19/India/KA-SEQ_14169_S30_R1_001/2022 | R | 649 | insYMR | 1 | 20220214 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | R | 649 | I | 17 | 20240801 |
| EPI_ISL_16442640 | NSP3 | hCoV-19/England/PHEC-YY8I7QI/2022 | R | 649 | stop | 11 | 20221223 |
| EPI_ISL_10943991 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8799/2022 | R | 649 | H | 1 | 20220208 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | R | 649 | Q | 8 | 20230406 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | R | 649 | S | 26 | 20230404 |
| EPI_ISL_18511354 | NSP3 | hCoV-19/South Korea/KDCA272020/2023 | R | 649 | G | 5 | 20231015 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | R | 649 | insLQAGN | 1 | 20220209 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | R | 649 | P | 1 | 20210318 |
| EPI_ISL_19348696 | NSP3 | hCoV-19/Morocco/22/2020 | R | 649 | Y | 1 | 20201101 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 650 | Q | 12 | 20250116 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | S | 650 | insTW | 1 | 20211122 |
| EPI_ISL_18301815 | NSP3 | hCoV-19/Italy/LOM-69468829/2023 | S | 650 | T | 45 | 20230914 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 650 | R | 2 | 20220210 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | S | 650 | N | 5 | 20230116 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | S | 650 | E | 4 | 20221201 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | S | 650 | insW | 1 | 20211015 |
| EPI_ISL_12166975 | NSP3 | hCoV-19/USA/ID-IBL-813567/2022 | S | 650 | H | 4 | 20220411 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | S | 650 | K | 23 | 20230410 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | S | 650 | del | 57 | 20230605 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | S | 650 | insKCQLQFLFLH | 1 | 20240801 |
| EPI_ISL_19769512 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00077/2022 | S | 650 | I | 3 | 20221119 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | S | 650 | P | 20 | 20240227 |
| EPI_ISL_12320488 | NSP3 | hCoV-19/Turkey/HSGM-G8546/2022 | S | 650 | L | 48 | 20220401 |
| EPI_ISL_18459021 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-020211/2023 | S | 650 | C | 26 | 20231009 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 650 | stop | 1 | 20230108 |
| EPI_ISL_19828642 | NSP3 | hCoV-19/Japan/FR055-0161/2025 | S | 650 | F | 3823 | 20250313 |
| EPI_ISL_18593212 | NSP3 | hCoV-19/Japan/PG-582247/2023 | S | 650 | D | 16 | 20231030 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 650 | G | 2 | 20230404 |
| EPI_ISL_19807206 | NSP3 | hCoV-19/Canada/ON-KHS-202500752-v1/2025 | S | 650 | A | 94 | 20250302 |
| EPI_ISL_18825767 | NSP3 | hCoV-19/Greece/PHLnetwork_KEDY_17355/2023 | S | 650 | Y | 68 | 20231222 |
| EPI_ISL_5274399 | NSP3 | hCoV-19/England/PHEC-3K047K31/2021 | S | 650 | W | 1 | 20210930 |
| EPI_ISL_4308999 | NSP3 | hCoV-19/England/PHEC-Y308Y81C/2021 | L | 651 | insLGXXXX | 1 | 20210916 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 651 | C | 16 | 20230410 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | L | 651 | insLRN | 1 | 20210521 |
| EPI_ISL_14771732 | NSP3 | hCoV-19/USA/TX-PHH-22V-060G1732/2022 | L | 651 | J | 7 | 20220301 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | L | 651 | stop | 1 | 20210804 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | L | 651 | insGIstopDLS | 1 | 20210809 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 651 | T | 4 | 20221226 |
| EPI_ISL_19243516 | NSP3 | hCoV-19/Sweden/M-SUS0023173/2024 | L | 651 | I | 104 | 20240626 |
| EPI_ISL_18672397 | NSP3 | hCoV-19/Sweden/D-6548223776/2023 | L | 651 | F | 29 | 20231209 |
| EPI_ISL_16454289 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-121559/2022 | L | 651 | P | 4 | 20221229 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | L | 651 | W | 1 | 20210414 |
| EPI_ISL_17301422 | NSP3 | hCoV-19/Germany/MV-UMG-18212141/2021 | L | 651 | insFSRTLE | 1 | 20210503 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | L | 651 | V | 24 | 20230404 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | L | 651 | del | 56 | 20230605 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 651 | K | 3 | 20210318 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | L | 651 | insLGTstopDLS | 1 | 20210813 |
| EPI_ISL_3922822 | NSP3 | hCoV-19/USA/ID-IBL-638515/2020 | L | 651 | insS | 1 | 20200801 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | L | 651 | G | 1 | 20210802 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 651 | Q | 10 | 20250116 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | L | 651 | S | 18 | 20230404 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | L | 651 | insT | 1 | 20230116 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | L | 651 | M | 4 | 20230217 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 651 | insWK | 1 | 20230108 |
| EPI_ISL_9476293 | NSP3 | hCoV-19/Brazil/SP-IB_149979/2022 | L | 651 | insV | 1 | 20220111 |
| EPI_ISL_8147225 | NSP3 | hCoV-19/Sweden/UUH-500000080759SP/2021 | L | 651 | insLGIstopDLS | 3 | 20211216 |
| EPI_ISL_19348696 | NSP3 | hCoV-19/Morocco/22/2020 | L | 651 | H | 1 | 20201101 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | L | 651 | A | 1 | 20220628 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 652 | insSAFYI | 5 | 20230410 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | K | 652 | insCQLQFLFLHLMLLQR | 1 | 20210114 |
| EPI_ISL_19280457 | NSP3 | hCoV-19/USA/TN-SPHL-20031/2023 | K | 652 | T | 35 | 20230924 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | K | 652 | A | 1 | 20210401 |
| EPI_ISL_3756896 | NSP3 | hCoV-19/USA/ID-IBL-746949/2021 | K | 652 | Y | 1 | 20210806 |
| EPI_ISL_19769512 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00077/2022 | K | 652 | L | 16 | 20221119 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | K | 652 | F | 16 | 20230406 |
| EPI_ISL_17530370 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13994/2023 | K | 652 | S | 32 | 20230315 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | K | 652 | G | 2 | 20211121 |
| EPI_ISL_19191194 | NSP3 | hCoV-19/Spain/CT-HUVH-E55363/2024 | K | 652 | N | 14 | 20240602 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | K | 652 | M | 4 | 20240801 |
| EPI_ISL_19340489 | NSP3 | hCoV-19/South Korea/KDCA293749/2024 | K | 652 | I | 53 | 20240712 |
| EPI_ISL_19348701 | NSP3 | hCoV-19/Morocco/27/2020 | K | 652 | P | 1 | 20201114 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | K | 652 | del | 60 | 20230605 |
| EPI_ISL_11333322 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-34/2022 | K | 652 | H | 4 | 20220205 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | K | 652 | V | 1 | 20210919 |
| EPI_ISL_19713541 | NSP3 | hCoV-19/Canada/AB-ABPHL-130959/2025 | K | 652 | R | 638 | 20250121 |
| EPI_ISL_4530142 | NSP3 | hCoV-19/England/PHEC-3G06FGEC/2021 | K | 652 | insCCC | 1 | 20210919 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 652 | E | 42 | 20250116 |
| EPI_ISL_16414557 | NSP3 | hCoV-19/Turkey/KSS-KSS4931511766/2022 | K | 652 | stop | 6 | 20221219 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | K | 652 | D | 5 | 20221011 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | K | 652 | Q | 51 | 20230404 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | V | 653 | R | 39 | 20210802 |
| EPI_ISL_18518995 | NSP3 | hCoV-19/USA/IL-RIPHL_160455_G/2023 | V | 653 | K | 4 | 20231016 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | V | 653 | C | 9 | 20220117 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | V | 653 | I | 16 | 20240227 |
| EPI_ISL_17700259 | NSP3 | hCoV-19/Puerto Rico/PR-I84349/2023 | V | 653 | G | 5 | 20230505 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | V | 653 | insY | 1 | 20200729 |
| EPI_ISL_17530320 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13903/2023 | V | 653 | M | 33 | 20230405 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 653 | E | 3 | 20220210 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | V | 653 | T | 20 | 20230404 |
| EPI_ISL_9805456 | NSP3 | hCoV-19/Brazil/SP-IB_150621/2022 | V | 653 | insXXXXXXXXXXXXARYMRSLKV | 1 | 20220121 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | V | 653 | Y | 3 | 20211015 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | V | 653 | L | 91 | 20240801 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | V | 653 | del | 53 | 20230605 |
| EPI_ISL_4530197 | NSP3 | hCoV-19/England/PHEC-3G074G19/2021 | V | 653 | Q | 2 | 20210919 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | V | 653 | stop | 2 | 20220725 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | V | 653 | insstopVstopD | 1 | 20221222 |
| EPI_ISL_18899986 | NSP3 | hCoV-19/South Korea/KDCA284624/2024 | V | 653 | A | 29 | 20240124 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | V | 653 | P | 2 | 20220818 |
| EPI_ISL_14588255 | NSP3 | hCoV-19/USA/ID-IBL-844143/2022 | V | 653 | F | 10 | 20220808 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 653 | S | 21 | 20250116 |
| EPI_ISL_10858542 | NSP3 | hCoV-19/Turkey/HSGM-G2472/2022 | P | 654 | V | 1 | 20220217 |
| EPI_ISL_19825281 | NSP3 | hCoV-19/USA/NY-NYULH-22563/2025 | P | 654 | S | 1769 | 20250331 |
| EPI_ISL_19451573 | NSP3 | hCoV-19/Netherlands/NH-RIVM-142080/2024 | P | 654 | Q | 91 | 20240915 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | P | 654 | N | 2 | 20210401 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | P | 654 | E | 1 | 20200729 |
| EPI_ISL_16900376 | NSP3 | hCoV-19/South Korea/KDCA205314/2023 | P | 654 | K | 4 | 20230114 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | P | 654 | H | 7 | 20230406 |
| EPI_ISL_19831386 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56885/2025 | P | 654 | L | 642 | 20250401 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | P | 654 | A | 9 | 20230302 |
| EPI_ISL_8813025 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100721-1201/2021 | P | 654 | C | 2 | 20211007 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | P | 654 | Y | 1 | 20210801 |
| EPI_ISL_11333322 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-34/2022 | P | 654 | M | 7 | 20220205 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | P | 654 | F | 5 | 20230217 |
| EPI_ISL_18226322 | NSP3 | hCoV-19/env/India/MH-FMR_B7-50a/2023 | P | 654 | stop | 10 | 20230222 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | P | 654 | I | 38 | 20211210 |
| EPI_ISL_18703582 | NSP3 | hCoV-19/USA/CA-CDPH-500130193/2023 | P | 654 | T | 75 | 20231203 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | P | 654 | R | 4 | 20221226 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | P | 654 | del | 59 | 20240227 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | P | 654 | G | 4 | 20220804 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | A | 655 | stop | 1 | 20211210 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | A | 655 | M | 37 | 20210419 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 655 | G | 6 | 20230108 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | A | 655 | Y | 3 | 20210807 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | A | 655 | R | 5 | 20221222 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | A | 655 | H | 6 | 20210508 |
| EPI_ISL_19749429 | NSP3 | hCoV-19/Ecuador/NIC-INSPI-0875-11472/2025 | A | 655 | T | 864 | 20250107 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | A | 655 | E | 5 | 20230404 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | A | 655 | I | 3 | 20220602 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | A | 655 | C | 12 | 20230404 |
| EPI_ISL_19826038 | NSP3 | hCoV-19/Singapore/Y25R15MSC122/2025 | A | 655 | V | 14488 | 20250408 |
| EPI_ISL_17201505 | NSP3 | hCoV-19/Chile/RM-15127/2023 | A | 655 | D | 14 | 20230227 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | A | 655 | del | 52 | 20240227 |
| EPI_ISL_5274399 | NSP3 | hCoV-19/England/PHEC-3K047K31/2021 | A | 655 | P | 2 | 20210930 |
| EPI_ISL_17301422 | NSP3 | hCoV-19/Germany/MV-UMG-18212141/2021 | A | 655 | N | 3 | 20210503 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | A | 655 | Q | 10 | 20240801 |
| EPI_ISL_19301017 | NSP3 | hCoV-19/Spain/VC-CVA_LAFE-124488/2024 | A | 655 | S | 154 | 20240117 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | A | 655 | K | 2 | 20210804 |
| EPI_ISL_17201525 | NSP3 | hCoV-19/Chile/AI-18335/2023 | A | 655 | insXXXXX | 1 | 20230227 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | A | 655 | L | 21 | 20230406 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 655 | F | 9 | 20250116 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | T | 656 | D | 1 | 20211210 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | T | 656 | E | 10 | 20230404 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | T | 656 | N | 2 | 20220209 |
| EPI_ISL_11799936 | NSP3 | hCoV-19/USA/ID-IBL-807224/2022 | T | 656 | L | 16 | 20220321 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | T | 656 | M | 6 | 20230406 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 656 | V | 42 | 20250116 |
| EPI_ISL_14595841 | NSP3 | hCoV-19/India/KA-CBR-6513/2021 | T | 656 | insDRR | 2 | 20210923 |
| EPI_ISL_15416615 | NSP3 | hCoV-19/USA/ID-IBL-854417/2022 | T | 656 | Q | 10 | 20220914 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | T | 656 | C | 9 | 20221228 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 656 | Y | 11 | 20240123 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | T | 656 | F | 7 | 20221011 |
| EPI_ISL_17201505 | NSP3 | hCoV-19/Chile/RM-15127/2023 | T | 656 | A | 22 | 20230227 |
| EPI_ISL_19817676 | NSP3 | hCoV-19/Spain/PV-HUD-70195981/2025 | T | 656 | I | 6324 | 20250331 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | T | 656 | R | 134 | 20240801 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | T | 656 | del | 48 | 20240227 |
| EPI_ISL_999429 | NSP3 | hCoV-19/Wales/OXON-F60193/2021 | T | 656 | insFYHL | 1 | 20210109 |
| EPI_ISL_18809138 | NSP3 | hCoV-19/USA/FL-CDC-QDX90948084/2024 | T | 656 | K | 9 | 20240102 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | T | 656 | insFLF | 1 | 20220117 |
| EPI_ISL_3756896 | NSP3 | hCoV-19/USA/ID-IBL-746949/2021 | T | 656 | H | 1 | 20210806 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | T | 656 | S | 22 | 20230217 |
| EPI_ISL_16650184 | NSP3 | hCoV-19/Chile/RM-2975/2023 | T | 656 | P | 8 | 20230111 |
| EPI_ISL_9430018 | NSP3 | hCoV-19/India/KA-CBR-SEQ-11023/2022 | V | 657 | insVLLVstopK | 1 | 20220104 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | V | 657 | S | 5 | 20221201 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | V | 657 | Y | 11 | 20221228 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 657 | C | 4 | 20230404 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | V | 657 | L | 25 | 20230406 |
| EPI_ISL_16650184 | NSP3 | hCoV-19/Chile/RM-2975/2023 | V | 657 | D | 5 | 20230111 |
| EPI_ISL_3178829 | NSP3 | hCoV-19/England/OXON-FA5DCB/2021 | V | 657 | W | 3 | 20210717 |
| EPI_ISL_16574131 | NSP3 | hCoV-19/South Africa/NICD-N51667/2023 | V | 657 | A | 11 | 20230106 |
| EPI_ISL_14333792 | NSP3 | hCoV-19/USA/ID-IBL-839608/2022 | V | 657 | T | 1 | 20220725 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | V | 657 | del | 41 | 20240227 |
| EPI_ISL_16027250 | NSP3 | hCoV-19/Indonesia/JI-ITD-59350NT/2022 | V | 657 | F | 16 | 20221107 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | V | 657 | stop | 1 | 20220628 |
| EPI_ISL_1964603 | NSP3 | hCoV-19/France/PAC-IHU-4739-N1/2021 | V | 657 | insRC | 1 | 20210421 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | V | 657 | H | 6 | 20230404 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | V | 657 | Q | 11 | 20220818 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | V | 657 | G | 4 | 20240123 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 657 | M | 12 | 20250116 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | V | 657 | I | 186 | 20240801 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | S | 658 | K | 5 | 20221011 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | S | 658 | D | 2 | 20211015 |
| EPI_ISL_18055456 | NSP3 | hCoV-19/Japan/PG-543217/2023 | S | 658 | C | 18 | 20230616 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 658 | N | 1 | 20221226 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | S | 658 | L | 26 | 20230406 |
| EPI_ISL_11872340 | NSP3 | hCoV-19/Czech Republic/FNP1854/2022 | S | 658 | I | 1 | 20220314 |
| EPI_ISL_18878696 | NSP3 | hCoV-19/Spain/CL-COV46361/2024 | S | 658 | F | 46 | 20240119 |
| EPI_ISL_1656527 | NSP3 | hCoV-19/France/PAC-IHU-3935-N1/2021 | S | 658 | insCX | 2 | 20210407 |
| EPI_ISL_19695055 | NSP3 | hCoV-19/Denmark/DCGC-691580/2025 | S | 658 | V | 24 | 20250106 |
| EPI_ISL_19784000 | NSP3 | hCoV-19/USA/MD-CDC-LC1134750/2025 | S | 658 | A | 103 | 20250303 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | S | 658 | R | 10 | 20220818 |
| EPI_ISL_13766129 | NSP3 | hCoV-19/Mexico/GUA_CIAD-IMSS_202201022680/2022 | S | 658 | Y | 43 | 20220619 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 658 | M | 9 | 20250116 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | S | 658 | del | 50 | 20240227 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | S | 658 | T | 55 | 20240123 |
| EPI_ISL_7832674 | NSP3 | hCoV-19/USA/ID-IBL-775587/2021 | S | 658 | Q | 1 | 20211205 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 658 | G | 23 | 20230404 |
| EPI_ISL_11799936 | NSP3 | hCoV-19/USA/ID-IBL-807224/2022 | S | 658 | E | 4 | 20220321 |
| EPI_ISL_14588255 | NSP3 | hCoV-19/USA/ID-IBL-844143/2022 | S | 658 | insF | 1 | 20220808 |
| EPI_ISL_18900121 | NSP3 | hCoV-19/South Korea/KDCA284772/2024 | S | 658 | P | 6 | 20240125 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | S | 658 | H | 1 | 20220117 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 659 | K | 9 | 20230404 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | V | 659 | Q | 9 | 20230406 |
| EPI_ISL_3033680 | NSP3 | hCoV-19/South Korea/KDCA6152/2021 | V | 659 | G | 2 | 20210624 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | V | 659 | P | 1 | 20240123 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | V | 659 | M | 1 | 20210401 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | V | 659 | F | 76 | 20230302 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | V | 659 | Y | 3 | 20210915 |
| EPI_ISL_14595841 | NSP3 | hCoV-19/India/KA-CBR-6513/2021 | V | 659 | E | 3 | 20210923 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | V | 659 | insF | 1 | 20210802 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 659 | D | 1 | 20220210 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | V | 659 | R | 1 | 20220602 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | V | 659 | del | 58 | 20240227 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | V | 659 | C | 6 | 20221201 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | V | 659 | N | 5 | 20230410 |
| EPI_ISL_19826015 | NSP3 | hCoV-19/Singapore/Y25R15MSC78/2025 | V | 659 | I | 562 | 20250408 |
| EPI_ISL_9476438 | NSP3 | hCoV-19/Brazil/SP-IB_149785/2022 | V | 659 | insLVstopKstopNLAPstopS | 3 | 20220114 |
| EPI_ISL_16689887 | NSP3 | hCoV-19/USA/NC-WFSM-1085-8897/2023 | V | 659 | A | 35 | 20230106 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | V | 659 | T | 4 | 20230217 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 659 | S | 6 | 20250116 |
| EPI_ISL_18854790 | NSP3 | hCoV-19/England/CLIMB-CM7Y8NRA/2024 | V | 659 | L | 158 | 20240123 |
| EPI_ISL_16650184 | NSP3 | hCoV-19/Chile/RM-2975/2023 | S | 660 | T | 24 | 20230111 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | S | 660 | E | 10 | 20230410 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | S | 660 | insFCFFTstopCCY | 1 | 20210915 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | S | 660 | R | 8 | 20230406 |
| EPI_ISL_4530197 | NSP3 | hCoV-19/England/PHEC-3G074G19/2021 | S | 660 | H | 1 | 20210919 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | S | 660 | V | 2 | 20210716 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 660 | Q | 8 | 20230404 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | S | 660 | stop | 8 | 20221228 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | S | 660 | G | 6 | 20230401 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | S | 660 | L | 16 | 20221222 |
| EPI_ISL_19826746 | NSP3 | hCoV-19/USA/MN-MDH-46609/2025 | S | 660 | F | 2526 | 20250401 |
| EPI_ISL_19665197 | NSP3 | hCoV-19/Wales/CLIMB-CM7Y8USC/2024 | S | 660 | Y | 718 | 20241224 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | S | 660 | insL | 1 | 20210805 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | S | 660 | del | 58 | 20240227 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | S | 660 | K | 3 | 20230116 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | S | 660 | I | 4 | 20240801 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | S | 660 | N | 6 | 20240123 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | S | 660 | D | 5 | 20221011 |
| EPI_ISL_11333322 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-34/2022 | S | 660 | M | 4 | 20220205 |
| EPI_ISL_19090369 | NSP3 | hCoV-19/Japan/FR021-0059/2024 | S | 660 | C | 12 | 20240319 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | S | 660 | insYI | 1 | 20210401 |
| EPI_ISL_19824315 | NSP3 | hCoV-19/South Korea/KDCA297308/2025 | S | 660 | P | 60 | 20250317 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 660 | A | 587 | 20250116 |
| EPI_ISL_3792997 | NSP3 | hCoV-19/Sweden/15852475P/2021 | S | 661 | R | 5 | 20210328 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | S | 661 | del | 64 | 20240227 |
| EPI_ISL_19589332 | NSP3 | hCoV-19/USA/IA-SHL-2535145/2024 | S | 661 | A | 39 | 20241111 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 661 | P | 38 | 20250116 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | S | 661 | F | 39 | 20220202 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | S | 661 | W | 6 | 20221228 |
| EPI_ISL_8138219 | NSP3 | hCoV-19/India/MH-RFIP04979/2021 | S | 661 | stop | 4 | 20211116 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | S | 661 | N | 1 | 20211015 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | S | 661 | D | 3 | 20220818 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 661 | V | 3 | 20220210 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | S | 661 | E | 3 | 20211122 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | S | 661 | L | 120 | 20240801 |
| EPI_ISL_19798081 | NSP3 | hCoV-19/Spain/CT-HUB-09398/2025 | S | 661 | T | 59 | 20250109 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | S | 661 | H | 9 | 20221222 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | S | 661 | insFCAFA | 1 | 20220209 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | S | 661 | I | 12 | 20230406 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | S | 661 | Q | 2 | 20211210 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | S | 661 | K | 5 | 20230410 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | S | 661 | Y | 3 | 20220927 |
| EPI_ISL_19592806 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBF30887/2024 | P | 662 | T | 87 | 20241125 |
| EPI_ISL_11338430 | NSP3 | hCoV-19/England/LSPA-3B306C5/2022 | P | 662 | A | 4 | 20220316 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | P | 662 | del | 66 | 20240227 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 662 | N | 3 | 20220210 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | P | 662 | D | 6 | 20220818 |
| EPI_ISL_19610845 | NSP3 | hCoV-19/South Korea/KDCA296502/2024 | P | 662 | R | 5 | 20241116 |
| EPI_ISL_17301422 | NSP3 | hCoV-19/Germany/MV-UMG-18212141/2021 | P | 662 | K | 2 | 20210503 |
| EPI_ISL_17021245 | NSP3 | hCoV-19/Chile/RM-199371/2021 | P | 662 | E | 3 | 20211227 |
| EPI_ISL_19750632 | NSP3 | hCoV-19/Hong Kong/VB25046967/2025 | P | 662 | S | 420 | 20250206 |
| EPI_ISL_4530197 | NSP3 | hCoV-19/England/PHEC-3G074G19/2021 | P | 662 | insLL | 1 | 20210919 |
| EPI_ISL_19793555 | NSP3 | hCoV-19/USA/MN-MDH-46467/2025 | P | 662 | L | 972 | 20250228 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | P | 662 | M | 7 | 20230406 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | P | 662 | I | 13 | 20230404 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | P | 662 | Q | 6 | 20230410 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | P | 662 | insLFLHL | 1 | 20210801 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | P | 662 | G | 2 | 20210401 |
| EPI_ISL_9476293 | NSP3 | hCoV-19/Brazil/SP-IB_149979/2022 | P | 662 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20220111 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | P | 662 | stop | 47 | 20230401 |
| EPI_ISL_10834572 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91312/2022 | P | 662 | V | 2 | 20220209 |
| EPI_ISL_18883561 | NSP3 | hCoV-19/USA/NY-UB-CHS-04013/2023 | P | 662 | H | 47 | 20230821 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | D | 663 | S | 17 | 20230404 |
| EPI_ISL_19138429 | NSP3 | hCoV-19/USA/WA-UW-24022269489/2024 | D | 663 | N | 270 | 20240222 |
| EPI_ISL_17021236 | NSP3 | hCoV-19/Chile/RM-199227/2021 | D | 663 | R | 1 | 20211227 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | D | 663 | P | 2 | 20210804 |
| EPI_ISL_15416615 | NSP3 | hCoV-19/USA/ID-IBL-854417/2022 | D | 663 | M | 11 | 20220914 |
| EPI_ISL_17639462 | NSP3 | hCoV-19/USA/NC-CDC-LC1040063/2023 | D | 663 | B | 18 | 20230424 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | D | 663 | stop | 2 | 20220202 |
| EPI_ISL_19274742 | NSP3 | hCoV-19/New Zealand/24YA5816/2024 | D | 663 | Y | 141 | 20240702 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | D | 663 | K | 3 | 20230404 |
| EPI_ISL_13113032 | NSP3 | hCoV-19/Turkey/HSGM-IST-01318/2022 | D | 663 | H | 6 | 20220520 |
| EPI_ISL_19803215 | NSP3 | hCoV-19/env/Germany/BY-LGL-6511733/2025 | D | 663 | E | 200 | 20250305 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 663 | W | 1 | 20220210 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | D | 663 | A | 118 | 20250116 |
| EPI_ISL_19687742 | NSP3 | hCoV-19/USA/NY-PRL-250114_82E04/2025 | D | 663 | G | 376 | 20250107 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | D | 663 | del | 59 | 20240227 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | D | 663 | V | 67 | 20230406 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | D | 663 | Q | 4 | 20220117 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | D | 663 | L | 11 | 20240801 |
| EPI_ISL_18678322 | NSP3 | hCoV-19/USA/MS-MSPHL-0909/2023 | D | 663 | C | 2 | 20231212 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | D | 663 | T | 3 | 20210114 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | D | 663 | F | 2 | 20220927 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | A | 664 | W | 1 | 20210915 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | A | 664 | del | 46 | 20240227 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | A | 664 | L | 22 | 20240801 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | A | 664 | M | 8 | 20211227 |
| EPI_ISL_18371104 | NSP3 | hCoV-19/Turkey/HSGM-AA00535/2023 | A | 664 | D | 38 | 20230826 |
| EPI_ISL_19313408 | NSP3 | hCoV-19/Canada/ON-PHL-202410959/2024 | A | 664 | T | 841 | 20240730 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | A | 664 | N | 4 | 20230217 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | A | 664 | stop | 3 | 20211015 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | A | 664 | insYF | 1 | 20210805 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 664 | Q | 7 | 20250116 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | A | 664 | C | 6 | 20220202 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | A | 664 | F | 3 | 20230116 |
| EPI_ISL_19807296 | NSP3 | hCoV-19/Canada/ON-PHL-202503843/2025 | A | 664 | V | 881 | 20250212 |
| EPI_ISL_11507506 | NSP3 | hCoV-19/Turkey/HSGM-G7594/2022 | A | 664 | P | 2 | 20220311 |
| EPI_ISL_17021236 | NSP3 | hCoV-19/Chile/RM-199227/2021 | A | 664 | E | 2 | 20211227 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | A | 664 | I | 19 | 20230410 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | A | 664 | Y | 13 | 20240123 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | A | 664 | K | 3 | 20220818 |
| EPI_ISL_15724245 | NSP3 | hCoV-19/Japan/PG-386281/2022 | A | 664 | G | 23 | 20221006 |
| EPI_ISL_18081236 | NSP3 | hCoV-19/env/Germany/BY-LGL-5943484/2023 | A | 664 | S | 64 | 20230712 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | A | 664 | R | 3 | 20220117 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | A | 664 | insstop | 37 | 20210419 |
| EPI_ISL_18900158 | NSP3 | hCoV-19/South Korea/KDCA284812/2024 | V | 665 | C | 3 | 20240119 |
| EPI_ISL_19464914 | NSP3 | hCoV-19/Germany/BY-MVP-000024882/2024 | V | 665 | L | 71 | 20240827 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | V | 665 | insFTstop | 1 | 20200729 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 665 | Y | 13 | 20250116 |
| EPI_ISL_19220402 | NSP3 | hCoV-19/Taiwan/CDC-F93023/2024 | V | 665 | A | 164 | 20240617 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | V | 665 | insGD | 5 | 20221011 |
| EPI_ISL_3792475 | NSP3 | hCoV-19/Sweden/DC109680721/2021 | V | 665 | M | 1 | 20210413 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | V | 665 | F | 28 | 20221228 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | V | 665 | insYFFFstopNTstopR | 4 | 20210328 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | V | 665 | insLQRIMVILXFFFstopNTstopR | 8 | 20211227 |
| EPI_ISL_18948588 | NSP3 | hCoV-19/South Korea/KDCA286242/2024 | V | 665 | G | 10 | 20240206 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | V | 665 | insFFFF | 1 | 20210805 |
| EPI_ISL_3792997 | NSP3 | hCoV-19/Sweden/15852475P/2021 | V | 665 | insYFFFstopNIstopR | 1 | 20210328 |
| EPI_ISL_7792621 | NSP3 | hCoV-19/South Korea/KDCA19547/2021 | V | 665 | D | 1 | 20211103 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | V | 665 | insFFstopNTstopR | 5 | 20221228 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | V | 665 | del | 42 | 20240227 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | V | 665 | S | 12 | 20230401 |
| EPI_ISL_17021245 | NSP3 | hCoV-19/Chile/RM-199371/2021 | V | 665 | stop | 2 | 20211227 |
| EPI_ISL_3801323 | NSP3 | hCoV-19/Thailand/Songkhla_SEQ14646/2021 | V | 665 | E | 1 | 20210808 |
| EPI_ISL_19783272 | NSP3 | hCoV-19/Japan/FR035-0112/2025 | V | 665 | I | 628 | 20250225 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | V | 665 | R | 39 | 20210419 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | T | 666 | L | 17 | 20230406 |
| EPI_ISL_19612387 | NSP3 | hCoV-19/Sichuan/PZHCDC-240758/2024 | T | 666 | R | 6 | 20240716 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | T | 666 | Y | 2 | 20220202 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | T | 666 | N | 10 | 20230217 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | T | 666 | G | 12 | 20230410 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | T | 666 | C | 5 | 20230302 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | T | 666 | del | 38 | 20240227 |
| EPI_ISL_999429 | NSP3 | hCoV-19/Wales/OXON-F60193/2021 | T | 666 | W | 1 | 20210109 |
| EPI_ISL_10220499 | NSP3 | hCoV-19/France/GES-HMN-22022040731/2022 | T | 666 | P | 2 | 20220110 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 666 | E | 5 | 20250116 |
| EPI_ISL_17306777 | NSP3 | hCoV-19/Canada/ON-PHL-23-18087/2023 | T | 666 | A | 27 | 20230316 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 666 | V | 11 | 20230404 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | T | 666 | K | 21 | 20240801 |
| EPI_ISL_16829092 | NSP3 | hCoV-19/Italy/LOM-ASST-69283205/2023 | T | 666 | Q | 10 | 20230130 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 666 | F | 3 | 20230116 |
| EPI_ISL_19680662 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56083/2025 | T | 666 | I | 229 | 20250108 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | T | 666 | M | 3 | 20221222 |
| EPI_ISL_19225243 | NSP3 | hCoV-19/England/CLIMB-CM7YEK1D/2024 | T | 666 | S | 16 | 20240618 |
| EPI_ISL_9476306 | NSP3 | hCoV-19/Brazil/SP-IB_149954/2022 | T | 666 | stop | 1 | 20220118 |
| EPI_ISL_6125400 | NSP3 | hCoV-19/Japan/20210815-33422/2021 | A | 667 | stop | 2 | 20210815 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | A | 667 | H | 3 | 20240801 |
| EPI_ISL_10220901 | NSP3 | hCoV-19/France/GES-HMN-22022040457/2022 | A | 667 | W | 1 | 20220103 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | A | 667 | R | 10 | 20230116 |
| EPI_ISL_19739830 | NSP3 | hCoV-19/Brazil/SP-LEIAL-4236/2025 | A | 667 | E | 184 | 20250113 |
| EPI_ISL_999429 | NSP3 | hCoV-19/Wales/OXON-F60193/2021 | A | 667 | N | 1 | 20210109 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | A | 667 | del | 35 | 20240227 |
| EPI_ISL_19788873 | NSP3 | hCoV-19/Mauritius/1174072/2024 | A | 667 | T | 502 | 20241008 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | A | 667 | insR | 1 | 20210813 |
| EPI_ISL_17262433 | NSP3 | hCoV-19/Singapore/R20MR81/2023 | A | 667 | P | 1 | 20230309 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 667 | L | 24 | 20250116 |
| EPI_ISL_16943682 | NSP3 | hCoV-19/Chile/AT-9781/2023 | A | 667 | G | 6 | 20230204 |
| EPI_ISL_9476438 | NSP3 | hCoV-19/Brazil/SP-IB_149785/2022 | A | 667 | insPLYLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20220114 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | A | 667 | Q | 3 | 20230404 |
| EPI_ISL_16900376 | NSP3 | hCoV-19/South Korea/KDCA205314/2023 | A | 667 | I | 7 | 20230114 |
| EPI_ISL_19803208 | NSP3 | hCoV-19/South Africa/NICD-R01853/2025 | A | 667 | V | 1117 | 20250305 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | A | 667 | D | 1 | 20211230 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | A | 667 | S | 48 | 20230404 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | A | 667 | F | 61 | 20221228 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | A | 667 | K | 2 | 20240123 |
| EPI_ISL_17021231 | NSP3 | hCoV-19/Chile/RM-199215/2021 | A | 667 | M | 2 | 20211227 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | A | 667 | C | 10 | 20230401 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 668 | H | 13 | 20230217 |
| EPI_ISL_9476306 | NSP3 | hCoV-19/Brazil/SP-IB_149954/2022 | Y | 668 | stop | 15 | 20220118 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | Y | 668 | R | 1 | 20210802 |
| EPI_ISL_17174552 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS667/2023 | Y | 668 | F | 8 | 20230213 |
| EPI_ISL_3033680 | NSP3 | hCoV-19/South Korea/KDCA6152/2021 | Y | 668 | E | 1 | 20210624 |
| EPI_ISL_6125400 | NSP3 | hCoV-19/Japan/20210815-33422/2021 | Y | 668 | W | 3 | 20210815 |
| EPI_ISL_13044538 | NSP3 | hCoV-19/USA/ID-IBL-821511/2022 | Y | 668 | M | 1 | 20220519 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | Y | 668 | Q | 14 | 20230404 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | Y | 668 | C | 3 | 20220818 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | Y | 668 | L | 15 | 20240801 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | Y | 668 | del | 30 | 20240227 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 668 | K | 5 | 20250116 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Y | 668 | V | 6 | 20220509 |
| EPI_ISL_10753248 | NSP3 | hCoV-19/India/KA-SEQ_13806_S248_R1_001/2022 | Y | 668 | insPGQGL | 3 | 20220211 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | Y | 668 | S | 2 | 20230116 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 668 | N | 3 | 20220210 |
| EPI_ISL_9476302 | NSP3 | hCoV-19/Brazil/SP-IB_149716/2022 | Y | 668 | P | 4 | 20220113 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Y | 668 | D | 2 | 20240123 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | Y | 668 | T | 2 | 20210401 |
| EPI_ISL_15416615 | NSP3 | hCoV-19/USA/ID-IBL-854417/2022 | Y | 668 | I | 14 | 20220914 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | N | 669 | G | 3 | 20240123 |
| EPI_ISL_3078900 | NSP3 | hCoV-19/England/OXON-FA17EF/2020 | N | 669 | insFCFF | 1 | 20201130 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | N | 669 | insF | 1 | 20210804 |
| EPI_ISL_16900376 | NSP3 | hCoV-19/South Korea/KDCA205314/2023 | N | 669 | R | 2 | 20230114 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | N | 669 | K | 31 | 20240801 |
| EPI_ISL_11887815 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0781/2022 | N | 669 | I | 4 | 20220109 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | N | 669 | L | 24 | 20230406 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | N | 669 | Q | 1 | 20221222 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | N | 669 | W | 1 | 20210807 |
| EPI_ISL_3792475 | NSP3 | hCoV-19/Sweden/DC109680721/2021 | N | 669 | F | 1 | 20210413 |
| EPI_ISL_19824315 | NSP3 | hCoV-19/South Korea/KDCA297308/2025 | N | 669 | T | 13 | 20250317 |
| EPI_ISL_15293857 | NSP3 | hCoV-19/India/GA-NCCS-617053975/2021 | N | 669 | C | 2 | 20211226 |
| EPI_ISL_13995913 | NSP3 | hCoV-19/env/USA/CA-SEARCH-90534/2022 | N | 669 | Y | 1 | 20220505 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | N | 669 | H | 9 | 20250116 |
| EPI_ISL_17301422 | NSP3 | hCoV-19/Germany/MV-UMG-18212141/2021 | N | 669 | D | 1 | 20210503 |
| EPI_ISL_13346222 | NSP3 | hCoV-19/USA/ID-IBL-824806/2022 | N | 669 | insL | 1 | 20220601 |
| EPI_ISL_19384166 | NSP3 | hCoV-19/South Korea/KDCA294876/2024 | N | 669 | S | 17 | 20240814 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | N | 669 | V | 2 | 20220818 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | N | 669 | E | 6 | 20230404 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | N | 669 | del | 38 | 20240227 |
| EPI_ISL_12137078 | NSP3 | hCoV-19/Singapore/3766/2022 | N | 669 | B | 3 | 20220407 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | N | 669 | insFCFFTstopCCYSVYstop | 1 | 20211122 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | N | 669 | stop | 58 | 20221228 |
| EPI_ISL_15416615 | NSP3 | hCoV-19/USA/ID-IBL-854417/2022 | N | 669 | M | 15 | 20220914 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | G | 670 | insR | 1 | 20211230 |
| EPI_ISL_14588255 | NSP3 | hCoV-19/USA/ID-IBL-844143/2022 | G | 670 | insIL | 1 | 20220808 |
| EPI_ISL_19445849 | NSP3 | hCoV-19/USA/IL-CDC-LC1120864/2024 | G | 670 | C | 57 | 20240913 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | G | 670 | F | 4 | 20211122 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | G | 670 | K | 12 | 20230406 |
| EPI_ISL_9476320 | NSP3 | hCoV-19/Brazil/SP-IB_149746/2022 | G | 670 | stop | 7 | 20220114 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | G | 670 | N | 61 | 20240801 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | G | 670 | E | 3 | 20220818 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | G | 670 | R | 3 | 20240123 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | G | 670 | I | 5 | 20230116 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | G | 670 | M | 1 | 20210802 |
| EPI_ISL_18150909 | NSP3 | hCoV-19/Canada/ON-PHL-23-28371/2023 | G | 670 | D | 40 | 20230818 |
| EPI_ISL_9476302 | NSP3 | hCoV-19/Brazil/SP-IB_149716/2022 | G | 670 | Y | 2 | 20220113 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | G | 670 | Q | 7 | 20230401 |
| EPI_ISL_18678322 | NSP3 | hCoV-19/USA/MS-MSPHL-0909/2023 | G | 670 | V | 34 | 20231212 |
| EPI_ISL_3456930 | NSP3 | hCoV-19/USA/CA-CDC-FG-068985/2021 | G | 670 | H | 1 | 20210807 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | G | 670 | L | 3 | 20220117 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | G | 670 | del | 41 | 20230605 |
| EPI_ISL_19433568 | NSP3 | hCoV-19/USA/UT-UPHL-240920964604/2024 | G | 670 | S | 368 | 20240901 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | G | 670 | W | 5 | 20220509 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | G | 670 | insstopC | 1 | 20230302 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | G | 670 | A | 3 | 20211230 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | G | 670 | T | 1 | 20220117 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Y | 671 | N | 8 | 20220509 |
| EPI_ISL_18245688 | NSP3 | hCoV-19/USA/MN-MDH-35985/2023 | Y | 671 | C | 241 | 20230814 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | Y | 671 | W | 7 | 20230404 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | Y | 671 | S | 4 | 20231007 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | Y | 671 | stop | 3 | 20220117 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | Y | 671 | P | 3 | 20240227 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | Y | 671 | E | 3 | 20220818 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | Y | 671 | del | 33 | 20230605 |
| EPI_ISL_19824315 | NSP3 | hCoV-19/South Korea/KDCA297308/2025 | Y | 671 | H | 209 | 20250317 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | Y | 671 | M | 2 | 20221222 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 671 | T | 5 | 20250116 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | Y | 671 | V | 6 | 20221011 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Y | 671 | K | 2 | 20240123 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | Y | 671 | R | 1 | 20230116 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 671 | A | 1 | 20210318 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | Y | 671 | F | 25 | 20230401 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | Y | 671 | I | 22 | 20240801 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | Y | 671 | L | 6 | 20220202 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | L | 672 | R | 5 | 20220117 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | L | 672 | M | 1 | 20210823 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | L | 672 | Y | 2 | 20211230 |
| EPI_ISL_18101243 | NSP3 | hCoV-19/Japan/PG-541937/2023 | L | 672 | A | 2 | 20230613 |
| EPI_ISL_19700476 | NSP3 | hCoV-19/Israel/ICH-741227268/2025 | L | 672 | I | 207 | 20250108 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | L | 672 | W | 1 | 20200729 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 672 | insXHN | 1 | 20230410 |
| EPI_ISL_1309760 | NSP3 | hCoV-19/England/OXON-F7614F/2021 | L | 672 | E | 1 | 20210213 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | L | 672 | S | 5 | 20230404 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | L | 672 | insstopCCYSVstopWLS | 1 | 20210802 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | L | 672 | del | 27 | 20230605 |
| EPI_ISL_14458262 | NSP3 | hCoV-19/Israel/ICH-741183652/2022 | L | 672 | P | 3 | 20220809 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | L | 672 | C | 3 | 20210806 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | L | 672 | G | 1 | 20230116 |
| EPI_ISL_12610866 | NSP3 | hCoV-19/Turkey/HSGM-G8656/2022 | L | 672 | stop | 3 | 20220407 |
| EPI_ISL_10753248 | NSP3 | hCoV-19/India/KA-SEQ_13806_S248_R1_001/2022 | L | 672 | T | 6 | 20220211 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 672 | F | 304 | 20250116 |
| EPI_ISL_10166710 | NSP3 | hCoV-19/Northern Ireland/NIRE-0154f6/2021 | L | 672 | J | 5 | 20211113 |
| EPI_ISL_13112791 | NSP3 | hCoV-19/Turkey/HSGM-IST-00181/2022 | L | 672 | H | 1 | 20220424 |
| EPI_ISL_18553605 | NSP3 | hCoV-19/France/IDF-IPP27434/2023 | L | 672 | V | 58 | 20231113 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | T | 673 | Y | 10 | 20230404 |
| EPI_ISL_16106466 | NSP3 | hCoV-19/USA/IL-120822155/2022 | T | 673 | S | 12 | 20221206 |
| EPI_ISL_18134102 | NSP3 | hCoV-19/Japan/PG-545600/2023 | T | 673 | A | 18 | 20230610 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | T | 673 | P | 1 | 20210805 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 673 | F | 12 | 20240123 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | T | 673 | K | 10 | 20230406 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | T | 673 | del | 26 | 20230605 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | T | 673 | insFstop | 1 | 20210508 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 673 | V | 6 | 20230404 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | T | 673 | stop | 1 | 20210915 |
| EPI_ISL_12610866 | NSP3 | hCoV-19/Turkey/HSGM-G8656/2022 | T | 673 | H | 1 | 20220407 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | T | 673 | M | 2 | 20211210 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | T | 673 | R | 5 | 20220509 |
| EPI_ISL_19240749 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBD37731/2024 | T | 673 | I | 56 | 20240626 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | T | 673 | insFFFstop | 1 | 20210809 |
| EPI_ISL_15034417 | NSP3 | hCoV-19/Japan/TKYkbm48712/2022 | T | 673 | N | 10 | 20220721 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | T | 673 | L | 26 | 20240801 |
| EPI_ISL_3421684 | NSP3 | hCoV-19/Wales/OXON-FA6FC4/2020 | T | 673 | D | 1 | 20201126 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 673 | C | 3 | 20230116 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | S | 674 | stop | 2 | 20220117 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 674 | M | 1 | 20230404 |
| EPI_ISL_18678322 | NSP3 | hCoV-19/USA/MS-MSPHL-0909/2023 | S | 674 | F | 25 | 20231212 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 674 | Q | 1 | 20220210 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | S | 674 | N | 14 | 20230406 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | S | 674 | D | 1 | 20240227 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | S | 674 | E | 9 | 20240123 |
| EPI_ISL_18980713 | NSP3 | hCoV-19/USA/TX-HMH-M-139963/2024 | S | 674 | P | 14 | 20240227 |
| EPI_ISL_9476302 | NSP3 | hCoV-19/Brazil/SP-IB_149716/2022 | S | 674 | I | 1 | 20220113 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 674 | C | 64 | 20250116 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | S | 674 | L | 26 | 20230401 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | S | 674 | T | 10 | 20230410 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | S | 674 | del | 24 | 20230418 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | S | 674 | Y | 3 | 20211230 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | S | 674 | K | 5 | 20240801 |
| EPI_ISL_19535516 | NSP3 | hCoV-19/Greece/PHLnetwork_4710/2024 | S | 674 | A | 19 | 20240802 |
| EPI_ISL_17021231 | NSP3 | hCoV-19/Chile/RM-199215/2021 | S | 674 | H | 4 | 20211227 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | S | 675 | G | 7 | 20230404 |
| EPI_ISL_3885965 | NSP3 | hCoV-19/Japan/PG-75851/2021 | S | 675 | insVIPTKKAGGTTEMLAKAL | 1 | 20210707 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | S | 675 | W | 8 | 20211227 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | S | 675 | del | 66 | 20230418 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 675 | A | 383 | 20250116 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | S | 675 | insVIPTKKASGTTEMLAKAL | 4 | 20221011 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | S | 675 | V | 11 | 20230116 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | S | 675 | insLEE | 2 | 20220818 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | S | 675 | Q | 2 | 20221201 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | S | 675 | H | 8 | 20230401 |
| EPI_ISL_14413662 | NSP3 | hCoV-19/USA/PA-CDC-STM-NB4U3ADKA/2022 | S | 675 | C | 4 | 20220730 |
| EPI_ISL_19629047 | NSP3 | hCoV-19/USA/CA-CDPH-500143417/2024 | S | 675 | T | 26 | 20240918 |
| EPI_ISL_15720393 | NSP3 | hCoV-19/Austria/Medilab_1570/2022 | S | 675 | Y | 7 | 20221030 |
| EPI_ISL_19824315 | NSP3 | hCoV-19/South Korea/KDCA297308/2025 | S | 675 | P | 20 | 20250317 |
| EPI_ISL_19267941 | NSP3 | hCoV-19/Iceland/L-5549/2024 | S | 675 | F | 34 | 20240705 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 675 | M | 5 | 20230404 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | S | 675 | insstopWLSYFF | 1 | 20200807 |
| EPI_ISL_9476306 | NSP3 | hCoV-19/Brazil/SP-IB_149954/2022 | S | 675 | stop | 7 | 20220118 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | S | 675 | N | 3 | 20240227 |
| EPI_ISL_10753248 | NSP3 | hCoV-19/India/KA-SEQ_13806_S248_R1_001/2022 | S | 675 | E | 3 | 20220211 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | S | 675 | I | 11 | 20240123 |
| EPI_ISL_15416615 | NSP3 | hCoV-19/USA/ID-IBL-854417/2022 | S | 675 | L | 19 | 20220914 |
| EPI_ISL_18052801 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14511/2023 | S | 676 | del | 87 | 20230617 |
| EPI_ISL_8686535 | NSP3 | hCoV-19/USA/CA-CDC-ASC210570846/2021 | S | 676 | insN | 1 | 20211227 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | S | 676 | T | 5 | 20221201 |
| EPI_ISL_15903637 | NSP3 | hCoV-19/Germany/SN-RKI-I-1031993/2022 | S | 676 | insS | 70 | 20220829 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 676 | N | 2 | 20220210 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | S | 676 | insstop | 2 | 20221003 |
| EPI_ISL_999429 | NSP3 | hCoV-19/Wales/OXON-F60193/2021 | S | 676 | E | 1 | 20210109 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | S | 676 | R | 6 | 20221011 |
| EPI_ISL_11947148 | NSP3 | hCoV-19/England/DHSC-CYNNYE6/2022 | S | 676 | D | 1 | 20220113 |
| EPI_ISL_19258799 | NSP3 | hCoV-19/England/CLIMB-CM7YJAAC/2024 | S | 676 | C | 6 | 20240624 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | S | 676 | L | 45 | 20240227 |
| EPI_ISL_19497895 | NSP3 | hCoV-19/USA/CA-SC-300167/2024 | S | 676 | F | 291 | 20240924 |
| EPI_ISL_19722132 | NSP3 | hCoV-19/USA/CA-PFZ04061/2025 | S | 676 | A | 147 | 20250122 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | S | 676 | K | 3 | 20211015 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | S | 676 | insstopLSYFFFstop | 1 | 20210806 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | S | 676 | Q | 6 | 20230404 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | S | 676 | stop | 11 | 20230116 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 676 | M | 1 | 20210318 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | S | 676 | insFFstop | 1 | 20200729 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | S | 676 | insCYSVAQWLSYFFFstop | 1 | 20210804 |
| EPI_ISL_9883074 | NSP3 | hCoV-19/USA/MA-NEIDL-03665/2022 | S | 676 | Y | 7 | 20220106 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | S | 676 | G | 2 | 20240123 |
| EPI_ISL_17454453 | NSP3 | hCoV-19/Puerto Rico/RCMI-0VC9VGJW/2022 | S | 676 | P | 4 | 20221215 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | K | 677 | stop | 5 | 20221222 |
| EPI_ISL_18867513 | NSP3 | hCoV-19/France/OCC-HCL724000035401/2024 | K | 677 | I | 9 | 20240102 |
| EPI_ISL_18495071 | NSP3 | hCoV-19/Shanghai/SCDC-JD1024_5/2023 | K | 677 | N | 42 | 20231020 |
| EPI_ISL_15845119 | NSP3 | hCoV-19/Portugal/PT44091/2022 | K | 677 | Q | 8 | 20221104 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 677 | A | 7 | 20230410 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | K | 677 | S | 5 | 20230404 |
| EPI_ISL_12934141 | NSP3 | hCoV-19/USA/OR-TRACE-WASH-061120-1354/2020 | K | 677 | W | 1 | 20200611 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | K | 677 | M | 6 | 20230401 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | K | 677 | C | 2 | 20210823 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | K | 677 | H | 1 | 20240227 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | K | 677 | del | 71 | 20240801 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | K | 677 | P | 8 | 20211227 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | K | 677 | G | 1 | 20210401 |
| EPI_ISL_19477892 | NSP3 | hCoV-19/Guatemala/1156-DLNS/2024 | K | 677 | R | 137 | 20240904 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | K | 677 | L | 12 | 20240123 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 677 | E | 101 | 20250116 |
| EPI_ISL_19741794 | NSP3 | hCoV-19/Hubei/HCDC-WH7576/2024 | K | 677 | T | 68 | 20241220 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | T | 678 | N | 6 | 20240227 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 678 | Y | 5 | 20250116 |
| EPI_ISL_4530197 | NSP3 | hCoV-19/England/PHEC-3G074G19/2021 | T | 678 | insILL | 1 | 20210919 |
| EPI_ISL_15416615 | NSP3 | hCoV-19/USA/ID-IBL-854417/2022 | T | 678 | H | 19 | 20220914 |
| EPI_ISL_15439706 | NSP3 | hCoV-19/Germany/NW-RKI-I-992564/2022 | T | 678 | R | 11 | 20220829 |
| EPI_ISL_19831415 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56916/2025 | T | 678 | I | 21795 | 20250324 |
| EPI_ISL_19003715 | NSP3 | hCoV-19/USA/OH-ODH-SC4030995/2024 | T | 678 | K | 91 | 20240301 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | T | 678 | del | 74 | 20240801 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 678 | Q | 3 | 20240123 |
| EPI_ISL_19517281 | NSP3 | hCoV-19/Japan/FR044-0033/2024 | T | 678 | S | 10 | 20240122 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | T | 678 | V | 8 | 20221011 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | T | 678 | stop | 1 | 20210701 |
| EPI_ISL_18355354 | NSP3 | hCoV-19/South Korea/KDCA266100/2023 | T | 678 | P | 3 | 20230919 |
| EPI_ISL_19639924 | NSP3 | hCoV-19/USA/MN-MDH-44517/2024 | T | 678 | A | 287 | 20241205 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | T | 678 | L | 10 | 20230401 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | T | 678 | F | 3 | 20220818 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | P | 679 | M | 1 | 20211210 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | P | 679 | T | 396 | 20250116 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | P | 679 | Y | 3 | 20210418 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | P | 679 | G | 1 | 20220117 |
| EPI_ISL_19140719 | NSP3 | hCoV-19/Pakistan/SZH50889/2024 | P | 679 | stop | 8 | 20240227 |
| EPI_ISL_19813451 | NSP3 | hCoV-19/France/ARA-HCL025050441101/2025 | P | 679 | S | 7876 | 20250325 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | P | 679 | del | 86 | 20240801 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | P | 679 | V | 1 | 20210401 |
| EPI_ISL_3078832 | NSP3 | hCoV-19/England/OXON-FA104E/2021 | P | 679 | D | 1 | 20210702 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | P | 679 | I | 2 | 20220927 |
| EPI_ISL_19255729 | NSP3 | hCoV-19/Hong Kong/CUHK-NC10910/2022 | P | 679 | E | 3 | 20220729 |
| EPI_ISL_19444448 | NSP3 | hCoV-19/Italy/LAZ-INMI-6135/2023 | P | 679 | F | 3 | 20231118 |
| EPI_ISL_19610845 | NSP3 | hCoV-19/South Korea/KDCA296502/2024 | P | 679 | R | 28 | 20241116 |
| EPI_ISL_19811922 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11114/2025 | P | 679 | L | 6183 | 20250319 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | P | 679 | K | 13 | 20211227 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | P | 679 | N | 1 | 20211222 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | P | 679 | A | 13 | 20220509 |
| EPI_ISL_19736667 | NSP3 | hCoV-19/Canada/BC-BCCDC-767273/2025 | P | 679 | H | 424 | 20250126 |
| EPI_ISL_19724821 | NSP3 | hCoV-19/USA/MA-MASPHL-13336/2024 | E | 680 | A | 495 | 20241230 |
| EPI_ISL_999429 | NSP3 | hCoV-19/Wales/OXON-F60193/2021 | E | 680 | insLM | 1 | 20210109 |
| EPI_ISL_10820465 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-78895/2022 | E | 680 | Z | 2 | 20220111 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 680 | G | 211 | 20250116 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | E | 680 | P | 3 | 20211015 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | E | 680 | Y | 4 | 20210809 |
| EPI_ISL_17764391 | NSP3 | hCoV-19/Canada/ON-PHL-23-24885/2023 | E | 680 | Q | 32 | 20230523 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | E | 680 | insIstop | 2 | 20220628 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | E | 680 | N | 2 | 20230116 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | E | 680 | S | 12 | 20240123 |
| EPI_ISL_19703867 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09958/2024 | E | 680 | K | 145 | 20241219 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | E | 680 | T | 8 | 20221011 |
| EPI_ISL_18678322 | NSP3 | hCoV-19/USA/MS-MSPHL-0909/2023 | E | 680 | stop | 8 | 20231212 |
| EPI_ISL_15646486 | NSP3 | hCoV-19/Germany/BW-RKI-I-1019481/2022 | E | 680 | V | 25 | 20221008 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | E | 680 | insstop | 1 | 20210809 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | E | 680 | L | 2 | 20220927 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | E | 680 | H | 1 | 20210815 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | E | 680 | I | 9 | 20211227 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | E | 680 | R | 11 | 20230410 |
| EPI_ISL_19472977 | NSP3 | hCoV-19/USA/MN-CDC-QDX24001269/2024 | E | 680 | D | 207 | 20240916 |
| EPI_ISL_9476306 | NSP3 | hCoV-19/Brazil/SP-IB_149954/2022 | E | 680 | insCILIPLYL | 5 | 20220118 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | E | 680 | del | 91 | 20240801 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 681 | N | 27 | 20250116 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | E | 681 | insstopI | 1 | 20211222 |
| EPI_ISL_17530293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14051/2023 | E | 681 | S | 8 | 20230406 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | E | 681 | F | 4 | 20210823 |
| EPI_ISL_11961707 | NSP3 | hCoV-19/Germany/BW-RKI-I-697885/2022 | E | 681 | L | 5 | 20220324 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | E | 681 | I | 1 | 20211210 |
| EPI_ISL_18210083 | NSP3 | hCoV-19/Italy/LOM-69450144/2023 | E | 681 | stop | 7 | 20230823 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 681 | insYQCG | 5 | 20250116 |
| EPI_ISL_18560085 | NSP3 | hCoV-19/Austria/AGES-1142721/2023 | E | 681 | D | 84 | 20231121 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | E | 681 | R | 16 | 20230401 |
| EPI_ISL_19832597 | NSP3 | hCoV-19/Canada/BC-BCCDC-771096/2025 | E | 681 | G | 249 | 20250224 |
| EPI_ISL_12146245 | NSP3 | hCoV-19/Turkey/HSGM-GS1608/2022 | E | 681 | V | 5 | 20220401 |
| EPI_ISL_17277013 | NSP3 | hCoV-19/Canada/MB-CPL-605702/2023 | E | 681 | K | 23 | 20230226 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | E | 681 | del | 91 | 20240801 |
| EPI_ISL_8962865 | NSP3 | hCoV-19/Wales/PHWC-PGHSC3/2021 | E | 681 | Z | 1 | 20211230 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | E | 681 | insILstop | 1 | 20210805 |
| EPI_ISL_19642084 | NSP3 | hCoV-19/USA/CA-PFZ01226/2024 | E | 681 | A | 49 | 20240905 |
| EPI_ISL_11887815 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0781/2022 | E | 681 | P | 2 | 20220109 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | E | 681 | T | 8 | 20220810 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | E | 681 | Q | 27 | 20240123 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | H | 682 | insT | 1 | 20210815 |
| EPI_ISL_17372580 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2625/2023 | H | 682 | S | 6 | 20230120 |
| EPI_ISL_15783998 | NSP3 | hCoV-19/Fujian/BD-VIR-SPE-0667/2021 | H | 682 | E | 1 | 20210910 |
| EPI_ISL_18798975 | NSP3 | hCoV-19/Japan/PG-580902/2023 | H | 682 | N | 38 | 20231017 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | H | 682 | insRKLMPV | 4 | 20220509 |
| EPI_ISL_18899986 | NSP3 | hCoV-19/South Korea/KDCA284624/2024 | H | 682 | L | 13 | 20240124 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 682 | C | 7 | 20220210 |
| EPI_ISL_999429 | NSP3 | hCoV-19/Wales/OXON-F60193/2021 | H | 682 | V | 1 | 20210109 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | H | 682 | I | 22 | 20230401 |
| EPI_ISL_19193607 | NSP3 | hCoV-19/France/OCC-ChuMtp-99240673491/2024 | H | 682 | Q | 54 | 20240307 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | H | 682 | K | 1 | 20210401 |
| EPI_ISL_19821492 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-145245/2025 | H | 682 | Y | 5249 | 20250322 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | H | 682 | G | 2 | 20240123 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | H | 682 | P | 11 | 20211227 |
| EPI_ISL_13842722 | NSP3 | hCoV-19/France/NAQ-CHUP-2206261407/2022 | H | 682 | D | 2 | 20220626 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | H | 682 | A | 1 | 20230410 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | H | 682 | W | 47 | 20221228 |
| EPI_ISL_19782802 | NSP3 | hCoV-19/Chile/AR-ISPC-19529/2025 | H | 682 | R | 1384 | 20250304 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | H | 682 | insLTCW | 1 | 20210809 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | H | 682 | del | 37 | 20230418 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | H | 682 | T | 9 | 20220509 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | H | 682 | F | 9 | 20220810 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | F | 683 | del | 30 | 20230418 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | F | 683 | G | 5 | 20230404 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | F | 683 | stop | 1 | 20210809 |
| EPI_ISL_13176009 | NSP3 | hCoV-19/Turkey/HSGM-IST-01440/2022 | F | 683 | V | 2 | 20220525 |
| EPI_ISL_11932836 | NSP3 | hCoV-19/England/DHSC-CYBWOY4/2021 | F | 683 | insQ | 1 | 20211225 |
| EPI_ISL_16575560 | NSP3 | hCoV-19/Japan/65691/2022 | F | 683 | A | 3 | 20220624 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | F | 683 | H | 6 | 20220117 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | F | 683 | M | 7 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 683 | D | 1 | 20220210 |
| EPI_ISL_3760031 | NSP3 | hCoV-19/USA/ID-IBL-747327/2021 | F | 683 | insL | 1 | 20210805 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | F | 683 | N | 2 | 20220602 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | F | 683 | C | 10 | 20220509 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | F | 683 | Y | 25 | 20250116 |
| EPI_ISL_3922800 | NSP3 | hCoV-19/USA/ID-IBL-636268/2020 | F | 683 | insYstopNH | 1 | 20200729 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | F | 683 | S | 9 | 20240123 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | F | 683 | L | 129 | 20240801 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | F | 683 | E | 1 | 20230404 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | F | 683 | K | 2 | 20230116 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | F | 683 | R | 1 | 20210326 |
| EPI_ISL_18823549 | NSP3 | hCoV-19/South Korea/KDCA282759/2023 | F | 683 | I | 21 | 20231230 |
| EPI_ISL_19824315 | NSP3 | hCoV-19/South Korea/KDCA297308/2025 | I | 684 | L | 162 | 20250317 |
| EPI_ISL_19699038 | NSP3 | hCoV-19/Brazil/MG-LACENMG-312247045/2024 | I | 684 | V | 1068 | 20241211 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | I | 684 | D | 1 | 20210418 |
| EPI_ISL_19286586 | NSP3 | hCoV-19/USA/TX-HMH-M-141399/2024 | I | 684 | F | 17 | 20240612 |
| EPI_ISL_12321676 | NSP3 | hCoV-19/Turkey/HSGM-GS2389/2022 | I | 684 | N | 2 | 20220405 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | I | 684 | R | 1 | 20220110 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | I | 684 | stop | 7 | 20220810 |
| EPI_ISL_19352782 | NSP3 | hCoV-19/Shanghai/SCDC-HG0409-962/2024 | I | 684 | T | 118 | 20240407 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 684 | K | 7 | 20250116 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | I | 684 | C | 1 | 20210915 |
| EPI_ISL_5384425 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-49645/2020 | I | 684 | J | 1 | 20200713 |
| EPI_ISL_19610845 | NSP3 | hCoV-19/South Korea/KDCA296502/2024 | I | 684 | M | 53 | 20241116 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | I | 684 | del | 25 | 20230418 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | I | 684 | Y | 8 | 20240123 |
| EPI_ISL_17372566 | NSP3 | hCoV-19/India/TN-SPHL-2877/2023 | I | 684 | S | 4 | 20230228 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | I | 684 | A | 1 | 20230410 |
| EPI_ISL_16575560 | NSP3 | hCoV-19/Japan/65691/2022 | I | 684 | P | 2 | 20220624 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 685 | H | 7 | 20250116 |
| EPI_ISL_11780816 | NSP3 | hCoV-19/Denmark/DCGC-460588/2022 | E | 685 | Z | 2 | 20220328 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | E | 685 | R | 3 | 20210803 |
| EPI_ISL_19192475 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16023/2024 | E | 685 | K | 52 | 20240324 |
| EPI_ISL_15166717 | NSP3 | hCoV-19/USA/GA-EHC-6066V/2022 | E | 685 | A | 6 | 20220810 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | E | 685 | insHG | 1 | 20230404 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | E | 685 | P | 1 | 20210401 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | E | 685 | C | 2 | 20220628 |
| EPI_ISL_18511354 | NSP3 | hCoV-19/South Korea/KDCA272020/2023 | E | 685 | D | 17 | 20231015 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | E | 685 | S | 5 | 20240123 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | E | 685 | I | 8 | 20230401 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | E | 685 | V | 18 | 20240801 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | E | 685 | N | 9 | 20230302 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | E | 685 | stop | 59 | 20221228 |
| EPI_ISL_19147468 | NSP3 | hCoV-19/Spain/AS-HUCA-232436837/2024 | E | 685 | G | 7 | 20240501 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | E | 685 | del | 25 | 20230418 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | E | 685 | T | 10 | 20230410 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | E | 685 | L | 8 | 20220818 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | E | 685 | Q | 9 | 20230217 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | T | 686 | L | 15 | 20230401 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | T | 686 | C | 4 | 20220117 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 686 | W | 1 | 20240123 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 686 | K | 4 | 20230116 |
| EPI_ISL_12934141 | NSP3 | hCoV-19/USA/OR-TRACE-WASH-061120-1354/2020 | T | 686 | insstopRTFYstop | 1 | 20200611 |
| EPI_ISL_19783906 | NSP3 | hCoV-19/Canada/AB-ABPHL-131345/2025 | T | 686 | I | 3179 | 20250220 |
| EPI_ISL_15522367 | NSP3 | hCoV-19/Germany/SN-RKI-I-1012191/2022 | T | 686 | S | 18 | 20221014 |
| EPI_ISL_1309760 | NSP3 | hCoV-19/England/OXON-F7614F/2021 | T | 686 | stop | 1 | 20210213 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | T | 686 | H | 6 | 20220810 |
| EPI_ISL_19826060 | NSP3 | hCoV-19/Singapore/Y25R15MSC39/2025 | T | 686 | A | 84 | 20250407 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | T | 686 | P | 37 | 20240801 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | T | 686 | F | 4 | 20230404 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | T | 686 | del | 20 | 20230418 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | T | 686 | R | 50 | 20221228 |
| EPI_ISL_842174 | NSP3 | hCoV-19/England/QEUH-A8C8FB/2020 | T | 686 | E | 2 | 20201016 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | T | 686 | V | 6 | 20230217 |
| EPI_ISL_19753435 | NSP3 | hCoV-19/New Zealand/25YA0512/2025 | T | 686 | N | 433 | 20250210 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | T | 686 | M | 1 | 20210521 |
| EPI_ISL_7778286 | NSP3 | hCoV-19/USA/ID-IBL-757603/2021 | T | 686 | insH | 2 | 20210913 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | T | 686 | Y | 2 | 20220818 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | I | 687 | D | 1 | 20240123 |
| EPI_ISL_12934141 | NSP3 | hCoV-19/USA/OR-TRACE-WASH-061120-1354/2020 | I | 687 | N | 1 | 20200611 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | I | 687 | C | 2 | 20220602 |
| EPI_ISL_19692133 | NSP3 | hCoV-19/USA/CT-DPH-1271394001/2025 | I | 687 | V | 924 | 20250112 |
| EPI_ISL_18330966 | NSP3 | hCoV-19/Netherlands/ZH-AUMC-001454/2023 | I | 687 | L | 150 | 20230919 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | I | 687 | K | 9 | 20220509 |
| EPI_ISL_13812276 | NSP3 | hCoV-19/USA/ID-IBL-831542/2022 | I | 687 | P | 1 | 20220624 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | I | 687 | del | 25 | 20230418 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | I | 687 | F | 11 | 20230404 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | I | 687 | R | 3 | 20230410 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | I | 687 | W | 4 | 20220117 |
| EPI_ISL_13081518 | NSP3 | hCoV-19/Guatemala/4571-LNS/2022 | I | 687 | M | 18 | 20220422 |
| EPI_ISL_5441248 | NSP3 | hCoV-19/USA/ID-IBL-758884/2021 | I | 687 | H | 5 | 20210918 |
| EPI_ISL_19823512 | NSP3 | hCoV-19/Spain/GA-CHUAC-13137/2025 | I | 687 | T | 2135 | 20250329 |
| EPI_ISL_19671195 | NSP3 | hCoV-19/USA/CA-PFZ03125/2024 | I | 687 | S | 116 | 20241215 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 687 | G | 1 | 20220210 |
| EPI_ISL_13873128 | NSP3 | hCoV-19/Germany/BE-ChVir-LB-220715-8591/2022 | I | 687 | J | 5 | 20220708 |
| EPI_ISL_8049913 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7119/2021 | I | 687 | A | 1 | 20211126 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | S | 688 | W | 1 | 20210921 |
| EPI_ISL_9476302 | NSP3 | hCoV-19/Brazil/SP-IB_149716/2022 | S | 688 | N | 7 | 20220113 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 688 | T | 18 | 20230404 |
| EPI_ISL_19819611 | NSP3 | hCoV-19/Australia/SA2511328/2025 | S | 688 | L | 2466 | 20250326 |
| EPI_ISL_19762326 | NSP3 | hCoV-19/env/Germany/BY-LGL-6470023/2025 | S | 688 | stop | 8 | 20250205 |
| EPI_ISL_18940108 | NSP3 | hCoV-19/USA/CA-HLX-STM-KSTTCSXGZ/2024 | S | 688 | A | 69 | 20240115 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | S | 688 | D | 6 | 20230217 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | S | 688 | del | 35 | 20230418 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | S | 688 | V | 48 | 20221228 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | S | 688 | K | 23 | 20240801 |
| EPI_ISL_10753248 | NSP3 | hCoV-19/India/KA-SEQ_13806_S248_R1_001/2022 | S | 688 | C | 4 | 20220211 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | S | 688 | Y | 3 | 20220202 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | S | 688 | F | 6 | 20230302 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | S | 688 | Q | 3 | 20230410 |
| EPI_ISL_17558149 | NSP3 | hCoV-19/Israel/SMC-7113454/2023 | S | 688 | P | 15 | 20230405 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | S | 688 | E | 1 | 20220110 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | S | 688 | insHL | 1 | 20211222 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | S | 688 | H | 24 | 20221201 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 689 | K | 9 | 20250116 |
| EPI_ISL_19831739 | NSP3 | hCoV-19/Luxembourg/LNS0856652/2025 | L | 689 | F | 15456 | 20250325 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | L | 689 | del | 37 | 20230418 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | L | 689 | T | 3 | 20210815 |
| EPI_ISL_19657431 | NSP3 | hCoV-19/Canada/AB-ABPHL-129327/2024 | L | 689 | J | 7 | 20241218 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | L | 689 | S | 1 | 20200701 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | L | 689 | stop | 2 | 20220602 |
| EPI_ISL_18295884 | NSP3 | hCoV-19/France/NAQ-HCL-723001112701/2023 | L | 689 | C | 8 | 20230904 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | L | 689 | R | 9 | 20241113 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | L | 689 | Y | 2 | 20240123 |
| EPI_ISL_16575560 | NSP3 | hCoV-19/Japan/65691/2022 | L | 689 | D | 3 | 20220624 |
| EPI_ISL_19675941 | NSP3 | hCoV-19/Canada/ON-PHL-202501249/2025 | L | 689 | I | 447 | 20250108 |
| EPI_ISL_5066531 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC2307/2021 | L | 689 | G | 2 | 20210908 |
| EPI_ISL_19812592 | NSP3 | hCoV-19/USA/DC-DFS-PHL-11500/2025 | L | 689 | V | 23 | 20250226 |
| EPI_ISL_12146238 | NSP3 | hCoV-19/Turkey/HSGM-GS1873/2022 | L | 689 | P | 6 | 20220401 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 689 | M | 4 | 20230217 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 689 | H | 16 | 20230410 |
| EPI_ISL_19803527 | NSP3 | hCoV-19/USA/WI-WSLH-2501035/2025 | A | 690 | D | 2346 | 20250312 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | A | 690 | insSEYT | 1 | 20230404 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | A | 690 | P | 2 | 20220703 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | A | 690 | N | 3 | 20220818 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | A | 690 | del | 56 | 20240801 |
| EPI_ISL_12166975 | NSP3 | hCoV-19/USA/ID-IBL-813567/2022 | A | 690 | I | 2 | 20220411 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | A | 690 | K | 6 | 20211210 |
| EPI_ISL_19484684 | NSP3 | hCoV-19/USA/CO-CDPHE-42328212/2024 | A | 690 | S | 216 | 20240905 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 690 | C | 9 | 20221229 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | A | 690 | F | 48 | 20221228 |
| EPI_ISL_16575560 | NSP3 | hCoV-19/Japan/65691/2022 | A | 690 | R | 5 | 20220624 |
| EPI_ISL_17021236 | NSP3 | hCoV-19/Chile/RM-199227/2021 | A | 690 | H | 2 | 20211227 |
| EPI_ISL_19676328 | NSP3 | hCoV-19/Singapore/Y25R3MSC64/2025 | A | 690 | T | 466 | 20250113 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | A | 690 | stop | 5 | 20230302 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | A | 690 | insKHLKN | 1 | 20210201 |
| EPI_ISL_3756896 | NSP3 | hCoV-19/USA/ID-IBL-746949/2021 | A | 690 | W | 1 | 20210806 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 690 | E | 6 | 20250116 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | A | 690 | L | 30 | 20230410 |
| EPI_ISL_19788398 | NSP3 | hCoV-19/South Korea/KDCA297121/2025 | A | 690 | V | 3246 | 20250221 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | A | 690 | G | 8 | 20230404 |
| EPI_ISL_18745176 | NSP3 | hCoV-19/Greece/PHLnetwork_KEDY-14030/2023 | G | 691 | V | 88 | 20231024 |
| EPI_ISL_19578772 | NSP3 | hCoV-19/Canada/SK-RRPL-751326/2024 | G | 691 | D | 43 | 20241109 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | G | 691 | del | 88 | 20230418 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | G | 691 | N | 1 | 20221229 |
| EPI_ISL_19826384 | NSP3 | hCoV-19/Canada/ON-PHL-202505080/2025 | G | 691 | S | 478 | 20250326 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | G | 691 | M | 4 | 20230217 |
| EPI_ISL_17072222 | NSP3 | hCoV-19/Fujian/FCDC-021502/2023 | G | 691 | A | 8 | 20230207 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | G | 691 | R | 9 | 20220209 |
| EPI_ISL_19753316 | NSP3 | hCoV-19/USA/CA-PFZ04508/2025 | G | 691 | C | 89 | 20250201 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | G | 691 | P | 5 | 20230410 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | G | 691 | I | 1 | 20210418 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | G | 691 | T | 7 | 20250116 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | G | 691 | W | 2 | 20221201 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | G | 691 | stop | 1 | 20210815 |
| EPI_ISL_12583958 | NSP3 | hCoV-19/Turkey/HSGM-GS2965/2022 | G | 691 | E | 4 | 20220407 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 691 | L | 1 | 20210318 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | G | 691 | K | 3 | 20230401 |
| EPI_ISL_1309760 | NSP3 | hCoV-19/England/OXON-F7614F/2021 | S | 692 | stop | 1 | 20210213 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | S | 692 | I | 1 | 20210809 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 692 | L | 14 | 20250116 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | S | 692 | P | 52 | 20240801 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | S | 692 | G | 1 | 20210418 |
| EPI_ISL_19822375 | NSP3 | hCoV-19/New Zealand/25YA0834/2025 | S | 692 | F | 8146 | 20250329 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | S | 692 | del | 87 | 20230404 |
| EPI_ISL_19537187 | NSP3 | hCoV-19/Hungary/101858-UPL24-004453/2024 | S | 692 | Y | 305 | 20240919 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | S | 692 | H | 3 | 20230401 |
| EPI_ISL_17640079 | NSP3 | hCoV-19/Spain/CL-COV41584/2023 | S | 692 | C | 881 | 20230404 |
| EPI_ISL_3330705 | NSP3 | hCoV-19/USA/TX-CDC-LC0104299/2021 | S | 692 | V | 1 | 20210709 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | S | 692 | Q | 4 | 20230410 |
| EPI_ISL_18841769 | NSP3 | hCoV-19/Thailand/NIC_SKA_8873/2023 | S | 692 | T | 31 | 20231222 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | S | 692 | K | 1 | 20200701 |
| EPI_ISL_9476316 | NSP3 | hCoV-19/Brazil/SP-IB_149744/2022 | S | 692 | insQTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20220111 |
| EPI_ISL_19637941 | NSP3 | hCoV-19/Russia/VLG-RII-MH217625S/2024 | S | 692 | A | 45 | 20241202 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | S | 692 | insL | 1 | 20210806 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 692 | N | 4 | 20230404 |
| EPI_ISL_9476319 | NSP3 | hCoV-19/Brazil/SP-IB_149762/2022 | Y | 693 | Q | 1 | 20220113 |
| EPI_ISL_19691825 | NSP3 | hCoV-19/Canada/ON-PHL-202502144/2025 | Y | 693 | H | 48 | 20250117 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 693 | insCIDGALLT | 5 | 20250116 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Y | 693 | W | 2 | 20221229 |
| EPI_ISL_18052799 | NSP3 | hCoV-19/India/MH-ICMR-NIV-233545/2023 | Y | 693 | del | 86 | 20230701 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | Y | 693 | E | 1 | 20230925 |
| EPI_ISL_16380151 | NSP3 | hCoV-19/France/ARA-CHUGA-2129246712/2022 | Y | 693 | stop | 8 | 20221220 |
| EPI_ISL_12934141 | NSP3 | hCoV-19/USA/OR-TRACE-WASH-061120-1354/2020 | Y | 693 | P | 1 | 20200611 |
| EPI_ISL_19824301 | NSP3 | hCoV-19/South Korea/KDCA297294/2025 | Y | 693 | F | 67 | 20250317 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Y | 693 | L | 11 | 20240123 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | Y | 693 | V | 7 | 20220117 |
| EPI_ISL_7547086 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-083121-1105/2021 | Y | 693 | insLLVP | 1 | 20210831 |
| EPI_ISL_19090680 | NSP3 | hCoV-19/Japan/FR021-0212/2024 | Y | 693 | C | 85 | 20240311 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 693 | M | 1 | 20220210 |
| EPI_ISL_12753107 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726728134/2022 | Y | 693 | N | 4 | 20220204 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | Y | 693 | D | 3 | 20220427 |
| EPI_ISL_10951514 | NSP3 | hCoV-19/Canada/AB-ABPHL-54978/2022 | Y | 693 | S | 2 | 20220208 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | Y | 693 | I | 52 | 20240801 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | Y | 693 | K | 1 | 20200701 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | K | 694 | H | 2 | 20220818 |
| EPI_ISL_17021236 | NSP3 | hCoV-19/Chile/RM-199227/2021 | K | 694 | V | 2 | 20211227 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | K | 694 | insLVY | 1 | 20210807 |
| EPI_ISL_19819797 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJ5GE/2025 | K | 694 | R | 426 | 20250313 |
| EPI_ISL_19473848 | NSP3 | hCoV-19/South Korea/KDCA295897/2024 | K | 694 | stop | 5 | 20240909 |
| EPI_ISL_18706232 | NSP3 | hCoV-19/France/NAQ-HCL723001794601/2023 | K | 694 | N | 98 | 20231211 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | K | 694 | A | 5 | 20220427 |
| EPI_ISL_18881381 | NSP3 | hCoV-19/England/CLIMB-CM7YMOE3/2024 | K | 694 | E | 27 | 20240130 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | K | 694 | L | 23 | 20240801 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | K | 694 | P | 5 | 20221011 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | K | 694 | S | 3 | 20240123 |
| EPI_ISL_8812967 | NSP3 | hCoV-19/USA/OR-TRACE-POLK-042521-1190/2021 | K | 694 | insLVPI | 1 | 20210425 |
| EPI_ISL_6268670 | NSP3 | hCoV-19/Jordan/Biolab0250/2021 | K | 694 | G | 1 | 20210715 |
| EPI_ISL_15292714 | NSP3 | hCoV-19/India/MH-NCCS-2748700699199/2021 | K | 694 | insLVL | 3 | 20211212 |
| EPI_ISL_17653381 | NSP3 | hCoV-19/USA/NJ-CDC-QDX49773362/2023 | K | 694 | Q | 10 | 20230501 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 694 | D | 1 | 20230410 |
| EPI_ISL_18989875 | NSP3 | hCoV-19/Japan/TKYnat16724/2024 | K | 694 | I | 26 | 20240229 |
| EPI_ISL_13346222 | NSP3 | hCoV-19/USA/ID-IBL-824806/2022 | K | 694 | insIGL | 1 | 20220601 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | K | 694 | del | 87 | 20230302 |
| EPI_ISL_13200465 | NSP3 | hCoV-19/South Korea/KDCA66525/2022 | K | 694 | T | 7 | 20220518 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | D | 695 | L | 5 | 20240307 |
| EPI_ISL_13346222 | NSP3 | hCoV-19/USA/ID-IBL-824806/2022 | D | 695 | F | 9 | 20220601 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | D | 695 | insVVLF | 1 | 20210804 |
| EPI_ISL_9476306 | NSP3 | hCoV-19/Brazil/SP-IB_149954/2022 | D | 695 | Q | 1 | 20220118 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | D | 695 | V | 6 | 20220427 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | D | 695 | R | 8 | 20220509 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | D | 695 | del | 83 | 20230302 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | D | 695 | insIHPILQKEHRTPHT | 1 | 20211222 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | D | 695 | C | 2 | 20230404 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | D | 695 | insHLTC | 1 | 20210809 |
| EPI_ISL_19345519 | NSP3 | hCoV-19/USA/CA-LACPHL-AY07677/2024 | D | 695 | A | 73 | 20240729 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | D | 695 | H | 3 | 20241113 |
| EPI_ISL_15399230 | NSP3 | hCoV-19/USA/NY-CDC-LC0894606/2022 | D | 695 | Y | 72 | 20220921 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | D | 695 | T | 1 | 20210418 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | D | 695 | insILLKPSHLLVPIK | 1 | 20230401 |
| EPI_ISL_18762912 | NSP3 | hCoV-19/Netherlands/UT-RIVM-136025/2023 | D | 695 | B | 11 | 20231227 |
| EPI_ISL_4394004 | NSP3 | hCoV-19/Poland/24948K/2021 | D | 695 | insLVLF | 1 | 20210902 |
| EPI_ISL_19758332 | NSP3 | hCoV-19/USA/MN-MDH-46295/2025 | D | 695 | G | 331 | 20250214 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | D | 695 | I | 31 | 20240123 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | D | 695 | P | 2 | 20220818 |
| EPI_ISL_19717381 | NSP3 | hCoV-19/Australia/QLD0x0151B4/2025 | D | 695 | N | 532 | 20250118 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | D | 695 | S | 12 | 20250116 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | D | 695 | K | 3 | 20221229 |
| EPI_ISL_19443775 | NSP3 | hCoV-19/Gansu/BYCDC140/2024 | D | 695 | E | 460 | 20240920 |
| EPI_ISL_12663595 | NSP3 | hCoV-19/Canada/BC-BCCDC-422538/2022 | W | 696 | L | 9 | 20220414 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | W | 696 | I | 4 | 20230410 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | W | 696 | H | 1 | 20211222 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | W | 696 | G | 35 | 20230404 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | W | 696 | F | 1 | 20221229 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | W | 696 | P | 3 | 20240307 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | W | 696 | N | 13 | 20240801 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | W | 696 | insFLstopRLN | 1 | 20210809 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | W | 696 | D | 3 | 20220818 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | W | 696 | V | 6 | 20230404 |
| EPI_ISL_9476318 | NSP3 | hCoV-19/Brazil/SP-IB_149976/2022 | W | 696 | A | 1 | 20220111 |
| EPI_ISL_6449654 | NSP3 | hCoV-19/Papua New Guinea/PNG5198/2021 | W | 696 | Y | 4 | 20210922 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | W | 696 | M | 3 | 20241113 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | W | 696 | Q | 7 | 20221226 |
| EPI_ISL_19134088 | NSP3 | hCoV-19/env/Germany/BY-LGL-6196580/2024 | W | 696 | C | 60 | 20240417 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | W | 696 | T | 4 | 20240123 |
| EPI_ISL_19610851 | NSP3 | hCoV-19/South Korea/KDCA296508/2024 | W | 696 | stop | 8 | 20241115 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | W | 696 | S | 12 | 20250116 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | W | 696 | del | 42 | 20230302 |
| EPI_ISL_16423774 | NSP3 | hCoV-19/Turkey/KSS-PCTSH4896488502/2022 | W | 696 | R | 11 | 20221121 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 697 | E | 6 | 20250116 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | S | 697 | del | 37 | 20240307 |
| EPI_ISL_11355271 | NSP3 | hCoV-19/France/GES-ChNa-210065730301/2021 | S | 697 | I | 2 | 20210814 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | S | 697 | L | 18 | 20240801 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 697 | H | 1 | 20230404 |
| EPI_ISL_9476330 | NSP3 | hCoV-19/Brazil/SP-IB_149714/2022 | S | 697 | N | 3 | 20220113 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | S | 697 | T | 63 | 20221228 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | S | 697 | Q | 1 | 20210418 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | S | 697 | V | 1 | 20210915 |
| EPI_ISL_19369019 | NSP3 | hCoV-19/South Korea/KDCA294677/2024 | S | 697 | P | 64 | 20240801 |
| EPI_ISL_5441248 | NSP3 | hCoV-19/USA/ID-IBL-758884/2021 | S | 697 | D | 1 | 20210918 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | S | 697 | K | 6 | 20220509 |
| EPI_ISL_15988917 | NSP3 | hCoV-19/Germany/SN-RKI-I-1038092/2022 | S | 697 | A | 12 | 20221121 |
| EPI_ISL_19636095 | NSP3 | hCoV-19/Japan/FR302-1699/2024 | S | 697 | Y | 95 | 20241204 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | S | 697 | C | 22 | 20230410 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | S | 697 | G | 6 | 20221229 |
| EPI_ISL_19831279 | NSP3 | hCoV-19/Japan/FR050-0104/2025 | S | 697 | F | 1739 | 20250408 |
| EPI_ISL_19423873 | NSP3 | hCoV-19/USA/NY-SUNYQB-XL2596/2024 | Y | 698 | F | 213 | 20240905 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | Y | 698 | insKHI | 1 | 20230404 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | Y | 698 | G | 1 | 20210418 |
| EPI_ISL_17021236 | NSP3 | hCoV-19/Chile/RM-199227/2021 | Y | 698 | M | 2 | 20211227 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | Y | 698 | del | 37 | 20230302 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 698 | V | 1 | 20240307 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | Y | 698 | E | 2 | 20211230 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Y | 698 | R | 1 | 20221229 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 698 | N | 2 | 20220210 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | Y | 698 | A | 2 | 20220818 |
| EPI_ISL_18557107 | NSP3 | hCoV-19/Brazil/BA-FIOCRUZ-PVM107242/2023 | Y | 698 | C | 116 | 20231110 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | Y | 698 | H | 272 | 20240801 |
| EPI_ISL_17211184 | NSP3 | hCoV-19/env/France/NAQ-CHUL-57-43/2023 | Y | 698 | D | 2 | 20230207 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | Y | 698 | S | 3 | 20241113 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Y | 698 | I | 92 | 20240123 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | Y | 698 | L | 10 | 20221011 |
| EPI_ISL_1309760 | NSP3 | hCoV-19/England/OXON-F7614F/2021 | S | 699 | insstop | 1 | 20210213 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | S | 699 | del | 76 | 20230302 |
| EPI_ISL_17540261 | NSP3 | hCoV-19/Spain/CT-HUGTiP-E3R134/2023 | S | 699 | P | 8 | 20230419 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 699 | K | 11 | 20250116 |
| EPI_ISL_18910448 | NSP3 | hCoV-19/England/CLIMB-CM7YRJ1G/2024 | S | 699 | C | 40 | 20240131 |
| EPI_ISL_14881050 | NSP3 | hCoV-19/USA/ID-IBL-845683/2022 | S | 699 | stop | 5 | 20220812 |
| EPI_ISL_18383121 | NSP3 | hCoV-19/Canada/AB-ABPHL-102992/2023 | S | 699 | A | 96 | 20230922 |
| EPI_ISL_19796293 | NSP3 | hCoV-19/Australia/SA2469927/2025 | S | 699 | F | 3272 | 20250301 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | S | 699 | W | 1 | 20210809 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 699 | L | 39 | 20221226 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | S | 699 | T | 33 | 20240307 |
| EPI_ISL_17021236 | NSP3 | hCoV-19/Chile/RM-199227/2021 | S | 699 | insY | 2 | 20211227 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | S | 699 | N | 22 | 20240801 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | S | 699 | G | 1 | 20200807 |
| EPI_ISL_19211593 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6740/2024 | S | 699 | Y | 104 | 20240409 |
| EPI_ISL_15643087 | NSP3 | hCoV-19/France/IDF-APHPSU_PSL-662210041327/2022 | G | 700 | V | 9 | 20221014 |
| EPI_ISL_19459292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16222/2024 | G | 700 | stop | 17 | 20240801 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | G | 700 | del | 85 | 20230302 |
| EPI_ISL_7509775 | NSP3 | hCoV-19/USA/CA-CSMC669/2020 | G | 700 | I | 1 | 20200910 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | G | 700 | C | 1 | 20241113 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | G | 700 | P | 3 | 20220519 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | G | 700 | Q | 1 | 20231226 |
| EPI_ISL_19233584 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004211352/2024 | G | 700 | E | 64 | 20240417 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | G | 700 | Y | 2 | 20240307 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | G | 700 | S | 6 | 20230404 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | G | 700 | D | 28 | 20230401 |
| EPI_ISL_17440550 | NSP3 | hCoV-19/Austria/AGES-1132207/2023 | G | 700 | R | 48 | 20230327 |
| EPI_ISL_8806461 | NSP3 | hCoV-19/India/GA-NCCS-3055200162983/2021 | G | 700 | insPI | 1 | 20210819 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | G | 700 | L | 3 | 20220818 |
| EPI_ISL_12955421 | NSP3 | hCoV-19/Russia/LIP-CRIE-7730693415/2022 | G | 700 | A | 1 | 20220215 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | G | 700 | N | 4 | 20221226 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | G | 700 | T | 15 | 20230410 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | G | 700 | W | 2 | 20210915 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | G | 700 | H | 3 | 20240123 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Q | 701 | T | 11 | 20230410 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Q | 701 | E | 2 | 20240123 |
| EPI_ISL_2464867 | NSP3 | hCoV-19/France/BFC-HMN-21052280498/2021 | Q | 701 | Z | 3 | 20210525 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | Q | 701 | del | 64 | 20230302 |
| EPI_ISL_11887815 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0781/2022 | Q | 701 | C | 1 | 20220109 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | Q | 701 | V | 10 | 20220818 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | Q | 701 | N | 35 | 20230404 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | Q | 701 | K | 17 | 20230404 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Q | 701 | P | 5 | 20250116 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | Q | 701 | D | 5 | 20221003 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | Q | 701 | L | 165 | 20241113 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | Q | 701 | S | 5 | 20220519 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 701 | Y | 13 | 20240307 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 701 | M | 1 | 20210318 |
| EPI_ISL_19693419 | NSP3 | hCoV-19/USA/MA-UM-G25X85P8/2024 | Q | 701 | H | 138 | 20241202 |
| EPI_ISL_12166975 | NSP3 | hCoV-19/USA/ID-IBL-813567/2022 | Q | 701 | stop | 5 | 20220411 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Q | 701 | I | 11 | 20221226 |
| EPI_ISL_19555163 | NSP3 | hCoV-19/Ukraine/89095/2024 | Q | 701 | R | 1333 | 20241017 |
| EPI_ISL_19264467 | NSP3 | hCoV-19/Canada/ON-PHL-202409807/2024 | S | 702 | Y | 201 | 20240703 |
| EPI_ISL_14881063 | NSP3 | hCoV-19/USA/ID-IBL-846239/2022 | S | 702 | stop | 8 | 20220816 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | S | 702 | L | 33 | 20230401 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | S | 702 | insHNstop | 1 | 20200729 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | S | 702 | K | 6 | 20220509 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | S | 702 | E | 2 | 20240123 |
| EPI_ISL_13029831 | NSP3 | hCoV-19/Denmark/DCGC-521099/2022 | S | 702 | C | 14 | 20220521 |
| EPI_ISL_12166975 | NSP3 | hCoV-19/USA/ID-IBL-813567/2022 | S | 702 | Q | 1 | 20220411 |
| EPI_ISL_19784812 | NSP3 | hCoV-19/Spain/CT-HUGTiP-C1R206/2025 | S | 702 | P | 1534 | 20250307 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | S | 702 | V | 2 | 20240307 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 702 | I | 7 | 20250116 |
| EPI_ISL_19056618 | NSP3 | hCoV-19/Henan/XYCDC-039/2024 | S | 702 | T | 31 | 20240213 |
| EPI_ISL_19736008 | NSP3 | hCoV-19/Spain/CT-BST-910111114/2025 | S | 702 | A | 109 | 20250103 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | S | 702 | del | 72 | 20230302 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | S | 702 | H | 3 | 20220519 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | S | 702 | W | 1 | 20210418 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 702 | N | 5 | 20221226 |
| EPI_ISL_19814343 | NSP3 | hCoV-19/Luxembourg/LNS9763335/2025 | S | 702 | F | 3717 | 20250115 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | S | 702 | R | 10 | 20220117 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 702 | M | 1 | 20220210 |
| EPI_ISL_19524922 | NSP3 | hCoV-19/USA/AR-CDC-2-8025604/2024 | T | 703 | A | 59 | 20240806 |
| EPI_ISL_19804756 | NSP3 | hCoV-19/USA/NY-NYULH-22453/2025 | T | 703 | I | 3311 | 20250322 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | T | 703 | P | 5 | 20241113 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | T | 703 | M | 1 | 20211230 |
| EPI_ISL_14881063 | NSP3 | hCoV-19/USA/ID-IBL-846239/2022 | T | 703 | N | 8 | 20220816 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 703 | D | 2 | 20221226 |
| EPI_ISL_18217169 | NSP3 | hCoV-19/Hubei/HCDC-HG2673/2023 | T | 703 | K | 40 | 20230820 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | T | 703 | V | 7 | 20221011 |
| EPI_ISL_18052801 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14511/2023 | T | 703 | H | 31 | 20230617 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | T | 703 | stop | 41 | 20210812 |
| EPI_ISL_17207422 | NSP3 | hCoV-19/Singapore/R19MR27/2023 | T | 703 | R | 4 | 20230302 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | T | 703 | del | 36 | 20230302 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 703 | Y | 12 | 20220210 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 703 | S | 5 | 20240307 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | T | 703 | F | 1 | 20210401 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | T | 703 | L | 4 | 20221003 |
| EPI_ISL_19548900 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-1820-2702/2024 | Q | 704 | P | 67 | 20241006 |
| EPI_ISL_18690950 | NSP3 | hCoV-19/USA/PA-CDC-LC1074955/2023 | Q | 704 | Z | 5 | 20231204 |
| EPI_ISL_19680270 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4189538/2024 | Q | 704 | E | 149 | 20241223 |
| EPI_ISL_14881063 | NSP3 | hCoV-19/USA/ID-IBL-846239/2022 | Q | 704 | F | 2 | 20220816 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | Q | 704 | insstop | 1 | 20220321 |
| EPI_ISL_18052801 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14511/2023 | Q | 704 | N | 40 | 20230617 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | Q | 704 | S | 2 | 20220427 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Q | 704 | V | 1 | 20221226 |
| EPI_ISL_9476330 | NSP3 | hCoV-19/Brazil/SP-IB_149714/2022 | Q | 704 | C | 2 | 20220113 |
| EPI_ISL_19558287 | NSP3 | hCoV-19/Canada/BC-BCCDC-750872/2024 | Q | 704 | R | 409 | 20241106 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | Q | 704 | H | 45 | 20241113 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Q | 704 | D | 8 | 20250116 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | Q | 704 | M | 2 | 20210823 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | Q | 704 | I | 3 | 20210802 |
| EPI_ISL_18546237 | NSP3 | hCoV-19/Slovenia/IMI-V1-12496/2023 | Q | 704 | stop | 17 | 20231024 |
| EPI_ISL_18725451 | NSP3 | hCoV-19/Australia/NSW-ICPMR-52391/2023 | Q | 704 | L | 16 | 20231213 |
| EPI_ISL_19384264 | NSP3 | hCoV-19/South Korea/KDCA294978/2024 | Q | 704 | K | 121 | 20240813 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Q | 704 | T | 9 | 20240123 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | Q | 704 | del | 35 | 20230302 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Q | 704 | A | 2 | 20230410 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | L | 705 | S | 1 | 20220427 |
| EPI_ISL_18052801 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14511/2023 | L | 705 | stop | 41 | 20230617 |
| EPI_ISL_8001996 | NSP3 | hCoV-19/Denmark/DCGC-281184/2021 | L | 705 | J | 5 | 20211212 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 705 | V | 28 | 20250116 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | L | 705 | E | 12 | 20221011 |
| EPI_ISL_9476330 | NSP3 | hCoV-19/Brazil/SP-IB_149714/2022 | L | 705 | A | 3 | 20220113 |
| EPI_ISL_14356993 | NSP3 | hCoV-19/USA/UT-UPHL-220806491502/2022 | L | 705 | R | 4 | 20220526 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | L | 705 | F | 12 | 20230404 |
| EPI_ISL_19826026 | NSP3 | hCoV-19/Singapore/Y25R15MSC63/2025 | L | 705 | I | 224 | 20250407 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | L | 705 | C | 2 | 20230217 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | L | 705 | K | 1 | 20240123 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | L | 705 | N | 7 | 20221201 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | L | 705 | Y | 19 | 20230404 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | L | 705 | del | 32 | 20230217 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | L | 705 | insVstopI | 1 | 20221222 |
| EPI_ISL_19261144 | NSP3 | hCoV-19/Australia/SA1833265/2024 | L | 705 | Q | 29 | 20240706 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 705 | T | 6 | 20230410 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | L | 705 | D | 1 | 20240307 |
| EPI_ISL_19216211 | NSP3 | hCoV-19/USA/OH-ODH-SC4032078/2024 | L | 705 | P | 115 | 20240530 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | G | 706 | del | 37 | 20250116 |
| EPI_ISL_18421827 | NSP3 | hCoV-19/env/Ukraine/80637/2023 | G | 706 | R | 24 | 20230914 |
| EPI_ISL_7778286 | NSP3 | hCoV-19/USA/ID-IBL-757603/2021 | G | 706 | E | 1 | 20210913 |
| EPI_ISL_19220976 | NSP3 | hCoV-19/Spain/EX-BA_18640328/2024 | G | 706 | D | 10 | 20240607 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | G | 706 | L | 3 | 20230302 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | G | 706 | W | 1 | 20210802 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | G | 706 | I | 2 | 20210823 |
| EPI_ISL_19375644 | NSP3 | hCoV-19/Sweden/X-87798102PK/2024 | G | 706 | C | 34 | 20240809 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | G | 706 | T | 4 | 20230410 |
| EPI_ISL_17021231 | NSP3 | hCoV-19/Chile/RM-199215/2021 | G | 706 | N | 4 | 20211227 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | G | 706 | stop | 6 | 20221201 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | G | 706 | A | 7 | 20221011 |
| EPI_ISL_8686566 | NSP3 | hCoV-19/USA/OH-CDC-ASC210571600/2021 | G | 706 | Y | 3 | 20211227 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | G | 706 | H | 4 | 20230404 |
| EPI_ISL_18587708 | NSP3 | hCoV-19/Sweden/X-42058525PK/2023 | G | 706 | V | 60 | 20231106 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | G | 706 | S | 57 | 20241113 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | I | 707 | G | 1 | 20210418 |
| EPI_ISL_19829199 | NSP3 | hCoV-19/USA/NY-CDC-LC1136776/2025 | I | 707 | V | 9295 | 20250403 |
| EPI_ISL_7709841 | NSP3 | hCoV-19/USA/CA-CDPH-500026998/2021 | I | 707 | insTXAL | 1 | 20211018 |
| EPI_ISL_19616748 | NSP3 | hCoV-19/USA/CO-CDPHE-42539080/2024 | I | 707 | T | 547 | 20241124 |
| EPI_ISL_6014040 | NSP3 | hCoV-19/South Korea/KDCA15453/2021 | I | 707 | A | 1 | 20211007 |
| EPI_ISL_7709861 | NSP3 | hCoV-19/USA/CA-CDPH-500026958/2021 | I | 707 | insXXXX | 3 | 20211018 |
| EPI_ISL_7492735 | NSP3 | hCoV-19/USA/ID-IBL-774047/2021 | I | 707 | insstopVstop | 1 | 20211201 |
| EPI_ISL_15729131 | NSP3 | hCoV-19/Australia/QLD0x012060/2022 | I | 707 | insGAT | 1 | 20221017 |
| EPI_ISL_2389453 | NSP3 | hCoV-19/Germany/HE-RKI-I-166127/2021 | I | 707 | P | 6 | 20210525 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 707 | del | 40 | 20250116 |
| EPI_ISL_19471410 | NSP3 | hCoV-19/Brazil/AL-IB_CEVC_2401168/2024 | I | 707 | R | 20 | 20240723 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | I | 707 | insstop | 1 | 20210802 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | I | 707 | S | 2 | 20240123 |
| EPI_ISL_19357324 | NSP3 | hCoV-19/France/NAQ-HCL724000370801/2024 | I | 707 | M | 1781 | 20240805 |
| EPI_ISL_15729107 | NSP3 | hCoV-19/Australia/QLD0x0120D5/2022 | I | 707 | insGAV | 1 | 20221020 |
| EPI_ISL_19429408 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS-111856/2024 | I | 707 | J | 2 | 20240823 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | I | 707 | F | 3 | 20230217 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | I | 707 | K | 20 | 20221011 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | I | 707 | Y | 7 | 20220726 |
| EPI_ISL_17557377 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3091/2023 | I | 707 | insQ | 1 | 20230408 |
| EPI_ISL_19233587 | NSP3 | hCoV-19/USA/TX-PHH-CS-03872/2024 | I | 707 | L | 83 | 20240508 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | I | 707 | H | 2 | 20230217 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | I | 707 | C | 2 | 20210815 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | I | 707 | stop | 59 | 20230401 |
| EPI_ISL_7710007 | NSP3 | hCoV-19/USA/CA-CDPH-500027006/2021 | I | 707 | insTPAL | 6 | 20211018 |
| EPI_ISL_12579457 | NSP3 | hCoV-19/Denmark/DCGC-508766/2022 | E | 708 | Z | 2 | 20220413 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | E | 708 | L | 2 | 20210823 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | E | 708 | V | 23 | 20221226 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | E | 708 | T | 7 | 20221011 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | E | 708 | F | 4 | 20230217 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | E | 708 | insGA | 1 | 20230404 |
| EPI_ISL_18774085 | NSP3 | hCoV-19/USA/CA-HLX-STM-TGUM57RN7/2023 | E | 708 | Q | 87 | 20231209 |
| EPI_ISL_999421 | NSP3 | hCoV-19/England/OXON-F6001E/2021 | E | 708 | C | 1 | 20210107 |
| EPI_ISL_7778286 | NSP3 | hCoV-19/USA/ID-IBL-757603/2021 | E | 708 | R | 2 | 20210913 |
| EPI_ISL_19793622 | NSP3 | hCoV-19/USA/MN-MDH-46534/2025 | E | 708 | K | 415 | 20250305 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | E | 708 | N | 80 | 20240712 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | E | 708 | S | 14 | 20240123 |
| EPI_ISL_19828163 | NSP3 | hCoV-19/Australia/QLD0x0154B5/2025 | E | 708 | A | 105 | 20250330 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | E | 708 | W | 2 | 20220519 |
| EPI_ISL_11887815 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0781/2022 | E | 708 | I | 1 | 20220109 |
| EPI_ISL_18137245 | NSP3 | hCoV-19/USA/MS-MSPHL-0385/2023 | E | 708 | stop | 10 | 20230810 |
| EPI_ISL_19565232 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000596301/2024 | E | 708 | D | 25 | 20241030 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 708 | del | 49 | 20250116 |
| EPI_ISL_19234603 | NSP3 | hCoV-19/Sichuan/PZHCDC-0467/2024 | E | 708 | G | 21 | 20240423 |
| EPI_ISL_1585044 | NSP3 | hCoV-19/USA/KS-KSU-4889/2021 | F | 709 | Y | 4 | 20210224 |
| EPI_ISL_6982081 | NSP3 | hCoV-19/England/PHEP-YYB6W9X/2021 | F | 709 | C | 3 | 20211108 |
| EPI_ISL_17021231 | NSP3 | hCoV-19/Chile/RM-199215/2021 | F | 709 | E | 2 | 20211227 |
| EPI_ISL_17954968 | NSP3 | hCoV-19/Israel/ICH-741198025/2023 | F | 709 | I | 23 | 20230615 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | F | 709 | del | 51 | 20230404 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 709 | G | 1 | 20220210 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | F | 709 | stop | 2 | 20221228 |
| EPI_ISL_14774711 | NSP3 | hCoV-19/Ireland/LM-NVRL-S22IRL00408813/2022 | F | 709 | S | 6 | 20220711 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | F | 709 | V | 27 | 20241113 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | F | 709 | T | 3 | 20240123 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | F | 709 | H | 2 | 20230410 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | F | 709 | W | 2 | 20220810 |
| EPI_ISL_19736133 | NSP3 | hCoV-19/Germany/BW-RKI-I-1147678/2025 | F | 709 | L | 1360 | 20250127 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | F | 709 | K | 1 | 20221226 |
| EPI_ISL_7778286 | NSP3 | hCoV-19/USA/ID-IBL-757603/2021 | L | 710 | insstop | 1 | 20210913 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | L | 710 | del | 48 | 20230404 |
| EPI_ISL_19329076 | NSP3 | hCoV-19/USA/NY-NPHL-240806_81B03/2024 | L | 710 | I | 130 | 20240802 |
| EPI_ISL_17021231 | NSP3 | hCoV-19/Chile/RM-199215/2021 | L | 710 | A | 2 | 20211227 |
| EPI_ISL_9196501 | NSP3 | hCoV-19/Nigeria/PHR-LA-062/2021 | L | 710 | H | 1 | 20210511 |
| EPI_ISL_19188802 | NSP3 | hCoV-19/USA/TX-HMH-M-141256/2024 | L | 710 | F | 35 | 20240601 |
| EPI_ISL_17955938 | NSP3 | hCoV-19/USA/TX-HMH-129529/2023 | L | 710 | stop | 7 | 20230618 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | L | 710 | Y | 6 | 20250116 |
| EPI_ISL_18743675 | NSP3 | hCoV-19/USA/TX-HMH-M-136743/2023 | L | 710 | J | 5 | 20231226 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | L | 710 | T | 2 | 20220810 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 710 | C | 1 | 20210318 |
| EPI_ISL_18948588 | NSP3 | hCoV-19/South Korea/KDCA286242/2024 | L | 710 | P | 9 | 20240206 |
| EPI_ISL_12321745 | NSP3 | hCoV-19/Turkey/HSGM-GS2496/2022 | L | 710 | S | 3 | 20220405 |
| EPI_ISL_19709375 | NSP3 | hCoV-19/USA/CA-PFZ03673/2024 | L | 710 | V | 14 | 20241111 |
| EPI_ISL_6776730 | NSP3 | hCoV-19/France/IDF-HMN-21112120526/2021 | L | 710 | R | 2 | 20211103 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | K | 711 | S | 1 | 20241113 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | K | 711 | E | 42 | 20240307 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | K | 711 | del | 75 | 20240712 |
| EPI_ISL_17739949 | NSP3 | hCoV-19/New Zealand/23XA2687/2023 | K | 711 | M | 195 | 20230501 |
| EPI_ISL_5441241 | NSP3 | hCoV-19/USA/ID-IBL-758898/2021 | K | 711 | insstop | 1 | 20210918 |
| EPI_ISL_11887815 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0781/2022 | K | 711 | I | 3 | 20220109 |
| EPI_ISL_19793803 | NSP3 | hCoV-19/Canada/AB-ABPHL-131397/2025 | K | 711 | R | 1304 | 20250304 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | K | 711 | Y | 1 | 20240123 |
| EPI_ISL_17021231 | NSP3 | hCoV-19/Chile/RM-199215/2021 | K | 711 | A | 2 | 20211227 |
| EPI_ISL_10858442 | NSP3 | hCoV-19/Turkey/HSGM-G2259/2022 | K | 711 | L | 4 | 20220217 |
| EPI_ISL_14795919 | NSP3 | hCoV-19/Sweden/03_SE600_000200318099N2/2022 | K | 711 | insXX | 1 | 20220113 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | K | 711 | stop | 5 | 20220519 |
| EPI_ISL_19526757 | NSP3 | hCoV-19/Germany/BY-LGL-6376766/2024 | K | 711 | N | 171 | 20241007 |
| EPI_ISL_10858436 | NSP3 | hCoV-19/Turkey/HSGM-G2247/2022 | K | 711 | G | 1 | 20220217 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 711 | P | 1 | 20230410 |
| EPI_ISL_17591891 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3244/2023 | K | 711 | insE | 2 | 20230418 |
| EPI_ISL_19573065 | NSP3 | hCoV-19/Thailand/NIC_BKK_1981/2024 | K | 711 | T | 46 | 20240913 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 711 | V | 2 | 20220210 |
| EPI_ISL_12753058 | NSP3 | hCoV-19/Russia/LEN-CRIE-7726741990/2022 | K | 711 | Q | 3 | 20220202 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | K | 711 | F | 2 | 20230217 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | K | 711 | D | 5 | 20220509 |
| EPI_ISL_8807024 | NSP3 | hCoV-19/India/GA-NCCS-3055100255359/2021 | R | 712 | N | 1 | 20211004 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | R | 712 | del | 44 | 20250116 |
| EPI_ISL_17243760 | NSP3 | hCoV-19/Australia/SA527887/2023 | R | 712 | L | 1 | 20230308 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | R | 712 | D | 1 | 20210401 |
| EPI_ISL_19213772 | NSP3 | hCoV-19/England/CLIMB-CM7YMQ77/2024 | R | 712 | K | 178 | 20240606 |
| EPI_ISL_19368061 | NSP3 | hCoV-19/USA/CO-CDPHE-42160759/2024 | R | 712 | S | 82 | 20240721 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | R | 712 | stop | 2 | 20230302 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | R | 712 | Q | 1 | 20230410 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | R | 712 | insDAPYIV | 2 | 20220818 |
| EPI_ISL_14881050 | NSP3 | hCoV-19/USA/ID-IBL-845683/2022 | R | 712 | V | 2 | 20220812 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | R | 712 | P | 1 | 20220702 |
| EPI_ISL_19473749 | NSP3 | hCoV-19/South Korea/KDCA295787/2024 | R | 712 | I | 22 | 20240909 |
| EPI_ISL_19351755 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242560/2024 | R | 712 | E | 78 | 20240621 |
| EPI_ISL_14510686 | NSP3 | hCoV-19/Japan/TKYkbm36084/2022 | R | 712 | T | 5 | 20220712 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | R | 712 | H | 1 | 20220810 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | R | 712 | Y | 5 | 20220509 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | R | 712 | G | 8 | 20240123 |
| EPI_ISL_19351755 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242560/2024 | G | 713 | V | 148 | 20240621 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | G | 713 | del | 49 | 20250116 |
| EPI_ISL_19213012 | NSP3 | hCoV-19/env/India/MH-NCL-244-31/2024 | G | 713 | E | 5 | 20240131 |
| EPI_ISL_19192530 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-15930/2024 | G | 713 | stop | 27 | 20240317 |
| EPI_ISL_19823390 | NSP3 | hCoV-19/USA/NY-SUNYQB-XL3205/2025 | G | 713 | S | 892 | 20250324 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | G | 713 | P | 1 | 20220427 |
| EPI_ISL_12319909 | NSP3 | hCoV-19/Turkey/HSGM-GS1613/2022 | G | 713 | I | 4 | 20220401 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | G | 713 | N | 2 | 20240123 |
| EPI_ISL_19450539 | NSP3 | hCoV-19/Liaoning/LNCDC-339-8/2024 | G | 713 | R | 348 | 20240915 |
| EPI_ISL_11897225 | NSP3 | hCoV-19/France/IDF-HMN-22032240141/2022 | G | 713 | A | 1 | 20220324 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | G | 713 | W | 1 | 20241113 |
| EPI_ISL_9476330 | NSP3 | hCoV-19/Brazil/SP-IB_149714/2022 | G | 713 | F | 2 | 20220113 |
| EPI_ISL_17021231 | NSP3 | hCoV-19/Chile/RM-199215/2021 | G | 713 | Y | 2 | 20211227 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | G | 713 | H | 3 | 20230410 |
| EPI_ISL_19621269 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55721/2024 | G | 713 | C | 658 | 20241127 |
| EPI_ISL_19021280 | NSP3 | hCoV-19/Pakistan/KMU_PHRL-1224/2024 | G | 713 | D | 59 | 20240321 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | D | 714 | T | 1 | 20210212 |
| EPI_ISL_16585061 | NSP3 | hCoV-19/Singapore/R5MR118/2023 | D | 714 | B | 11 | 20230115 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | D | 714 | E | 57 | 20250116 |
| EPI_ISL_19223151 | NSP3 | hCoV-19/USA/CA-CDPH-500137788/2024 | D | 714 | V | 358 | 20240509 |
| EPI_ISL_19351755 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242560/2024 | D | 714 | I | 82 | 20240621 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | D | 714 | H | 1 | 20220702 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | D | 714 | del | 36 | 20230217 |
| EPI_ISL_15082684 | NSP3 | hCoV-19/Japan/PG-353321/2022 | D | 714 | K | 3 | 20220815 |
| EPI_ISL_19826565 | NSP3 | hCoV-19/USA/NY-PRL-250408_81D05/2025 | D | 714 | G | 2942 | 20250328 |
| EPI_ISL_19824301 | NSP3 | hCoV-19/South Korea/KDCA297294/2025 | D | 714 | N | 429 | 20250317 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | D | 714 | S | 1 | 20230404 |
| EPI_ISL_19574577 | NSP3 | hCoV-19/Taiwan/CDC-W40922/2024 | D | 714 | A | 369 | 20241125 |
| EPI_ISL_17021231 | NSP3 | hCoV-19/Chile/RM-199215/2021 | D | 714 | M | 2 | 20211227 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | D | 714 | R | 1 | 20200729 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | D | 714 | W | 1 | 20210401 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | D | 714 | L | 4 | 20240307 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | D | 714 | stop | 30 | 20221213 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | D | 714 | Q | 3 | 20230217 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | D | 714 | Y | 129 | 20241113 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | K | 715 | C | 1 | 20221222 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | K | 715 | del | 33 | 20230217 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | K | 715 | L | 4 | 20220702 |
| EPI_ISL_3342061 | NSP3 | hCoV-19/Thailand/Nakhon Pathom_SEQ4827/2021 | K | 715 | P | 1 | 20210605 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | K | 715 | A | 1 | 20240123 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 715 | S | 6 | 20230410 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | K | 715 | insstopstop | 1 | 20200807 |
| EPI_ISL_19213012 | NSP3 | hCoV-19/env/India/MH-NCL-244-31/2024 | K | 715 | I | 11 | 20240131 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | K | 715 | insstopNFstopRstopstop | 1 | 20220810 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | K | 715 | F | 1 | 20210418 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | K | 715 | Q | 4 | 20241113 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 715 | N | 45 | 20250116 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | K | 715 | G | 4 | 20230404 |
| EPI_ISL_18050238 | NSP3 | hCoV-19/USA/CA-CDPH-6000015933/2023 | K | 715 | T | 9 | 20230627 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | K | 715 | V | 2 | 20220810 |
| EPI_ISL_17959486 | NSP3 | hCoV-19/Canada/QC-L00628071001/2023 | K | 715 | E | 40 | 20230619 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | K | 715 | stop | 12 | 20221201 |
| EPI_ISL_19824301 | NSP3 | hCoV-19/South Korea/KDCA297294/2025 | K | 715 | R | 140 | 20250317 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | K | 715 | insYKGPIT | 1 | 20230404 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | S | 716 | H | 2 | 20220427 |
| EPI_ISL_19662733 | NSP3 | hCoV-19/Singapore/R61MQ13/2024 | S | 716 | R | 90 | 20241108 |
| EPI_ISL_19213012 | NSP3 | hCoV-19/env/India/MH-NCL-244-31/2024 | S | 716 | K | 7 | 20240131 |
| EPI_ISL_19351755 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242560/2024 | S | 716 | del | 133 | 20240621 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | S | 716 | M | 1 | 20210917 |
| EPI_ISL_19773089 | NSP3 | hCoV-19/USA/NY-CDC-LC1134096/2025 | S | 716 | I | 529 | 20250224 |
| EPI_ISL_19462070 | NSP3 | hCoV-19/Japan/EIS10-706/2024 | S | 716 | N | 152 | 20240825 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | S | 716 | F | 5 | 20220509 |
| EPI_ISL_19550902 | NSP3 | hCoV-19/Japan/FR055-0317/2024 | S | 716 | C | 86 | 20241020 |
| EPI_ISL_5441241 | NSP3 | hCoV-19/USA/ID-IBL-758898/2021 | S | 716 | insK | 1 | 20210918 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | S | 716 | T | 9 | 20240307 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | S | 716 | V | 2 | 20220519 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 716 | Q | 1 | 20220210 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | S | 716 | stop | 3 | 20210803 |
| EPI_ISL_19139226 | NSP3 | hCoV-19/England/CLIMB-CM7YEQWT/2024 | S | 716 | G | 108 | 20240430 |
| EPI_ISL_15082684 | NSP3 | hCoV-19/Japan/PG-353321/2022 | S | 716 | A | 3 | 20220815 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | S | 716 | Y | 1 | 20210806 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 716 | D | 2 | 20230404 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 716 | L | 2 | 20221226 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | S | 716 | E | 5 | 20230404 |
| EPI_ISL_15082684 | NSP3 | hCoV-19/Japan/PG-353321/2022 | V | 717 | F | 2 | 20220815 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | V | 717 | insTCVA | 1 | 20211222 |
| EPI_ISL_19591003 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000620701/2024 | V | 717 | del | 39 | 20241114 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | V | 717 | S | 2 | 20240307 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | V | 717 | I | 814 | 20241113 |
| EPI_ISL_18219529 | NSP3 | hCoV-19/Reunion/ChuReu-723060768601/2023 | V | 717 | D | 8 | 20230509 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | V | 717 | M | 2 | 20211122 |
| EPI_ISL_19805329 | NSP3 | hCoV-19/USA/NY-URMC-P2S1U382-1/2024 | V | 717 | L | 90 | 20241217 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | V | 717 | A | 18 | 20230217 |
| EPI_ISL_14584695 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16380/2022 | V | 717 | G | 1 | 20220725 |
| EPI_ISL_8807024 | NSP3 | hCoV-19/India/GA-NCCS-3055100255359/2021 | V | 717 | P | 2 | 20211004 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | V | 717 | insCHstopstop | 1 | 20211122 |
| EPI_ISL_18115503 | NSP3 | hCoV-19/Thailand/NIC_CRI_P2887/2023 | V | 717 | stop | 1 | 20230720 |
| EPI_ISL_12146082 | NSP3 | hCoV-19/Turkey/HSGM-GS1795/2022 | V | 717 | T | 3 | 20220401 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | V | 717 | E | 1 | 20210418 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 717 | Y | 10 | 20250116 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 717 | H | 1 | 20220210 |
| EPI_ISL_11887815 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0781/2022 | V | 717 | R | 1 | 20220109 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | V | 717 | C | 1 | 20230410 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 718 | Q | 1 | 20240307 |
| EPI_ISL_19642997 | NSP3 | hCoV-19/Thailand/NIC_TAK_FRS2774/2024 | Y | 718 | C | 811 | 20241127 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | Y | 718 | F | 19 | 20230404 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 718 | T | 8 | 20250116 |
| EPI_ISL_18362116 | NSP3 | hCoV-19/Singapore/R72MR113/2023 | Y | 718 | I | 7 | 20231003 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | Y | 718 | W | 1 | 20210212 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | Y | 718 | E | 1 | 20210418 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | Y | 718 | S | 6 | 20241113 |
| EPI_ISL_19805255 | NSP3 | hCoV-19/USA/CA-CDPH-500146389/2025 | Y | 718 | H | 846 | 20250127 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | Y | 718 | V | 4 | 20221130 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | Y | 718 | K | 2 | 20210726 |
| EPI_ISL_1039245 | NSP3 | hCoV-19/Belgium/UZA-UA-00162918/2021 | Y | 718 | N | 1 | 20210205 |
| EPI_ISL_4096444 | NSP3 | hCoV-19/USA/NY-PRL-2021_0701_52M16/2020 | Y | 718 | insXS | 1 | 20201120 |
| EPI_ISL_15082684 | NSP3 | hCoV-19/Japan/PG-353321/2022 | Y | 718 | insILPSIISNEKH | 1 | 20220815 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | Y | 718 | P | 3 | 20220702 |
| EPI_ISL_19643393 | NSP3 | hCoV-19/USA/TX-HMH-M-146931/2024 | Y | 718 | L | 31 | 20241116 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | Y | 718 | stop | 102 | 20230217 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Y | 718 | A | 1 | 20240123 |
| EPI_ISL_19591003 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000620701/2024 | Y | 718 | del | 54 | 20241114 |
| EPI_ISL_7508606 | NSP3 | hCoV-19/USA/CA-CSMC410/2020 | Y | 718 | R | 1 | 20200803 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | Y | 718 | insHstopstopS | 12 | 20221213 |
| EPI_ISL_9476330 | NSP3 | hCoV-19/Brazil/SP-IB_149714/2022 | Y | 719 | R | 3 | 20220113 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 719 | G | 1 | 20240307 |
| EPI_ISL_18686323 | NSP3 | hCoV-19/Xinjiang/XJCDCWLMQ-629/2023 | Y | 719 | C | 117 | 20231028 |
| EPI_ISL_10749105 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC5818/2022 | Y | 719 | insVFQ | 1 | 20220204 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | Y | 719 | T | 10 | 20250116 |
| EPI_ISL_19351755 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242560/2024 | Y | 719 | I | 109 | 20240621 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Y | 719 | L | 6 | 20221226 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | Y | 719 | E | 2 | 20230217 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | Y | 719 | V | 1 | 20211230 |
| EPI_ISL_19779702 | NSP3 | hCoV-19/Wales/CLIMB-CM7YFQS7/2025 | Y | 719 | H | 270 | 20250224 |
| EPI_ISL_18362116 | NSP3 | hCoV-19/Singapore/R72MR113/2023 | Y | 719 | K | 2 | 20231003 |
| EPI_ISL_19591003 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000620701/2024 | Y | 719 | D | 5 | 20241114 |
| EPI_ISL_18219529 | NSP3 | hCoV-19/Reunion/ChuReu-723060768601/2023 | Y | 719 | del | 52 | 20230509 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | Y | 719 | N | 3 | 20230410 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | Y | 719 | Q | 2 | 20220818 |
| EPI_ISL_16180310 | NSP3 | hCoV-19/Malaysia/UNIMAS-B18995/2022 | Y | 719 | F | 8 | 20221208 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | Y | 719 | insHstopstop | 1 | 20220628 |
| EPI_ISL_12582751 | NSP3 | hCoV-19/Turkey/HSGM-GS2213/2022 | Y | 719 | P | 2 | 20220410 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | Y | 719 | W | 3 | 20220519 |
| EPI_ISL_17530320 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13903/2023 | Y | 719 | stop | 8 | 20230405 |
| EPI_ISL_12146117 | NSP3 | hCoV-19/Turkey/HSGM-GS1497/2022 | Y | 719 | S | 9 | 20220401 |
| EPI_ISL_7508606 | NSP3 | hCoV-19/USA/CA-CSMC410/2020 | T | 720 | M | 1 | 20200803 |
| EPI_ISL_7492735 | NSP3 | hCoV-19/USA/ID-IBL-774047/2021 | T | 720 | insII | 1 | 20211201 |
| EPI_ISL_8807024 | NSP3 | hCoV-19/India/GA-NCCS-3055100255359/2021 | T | 720 | L | 3 | 20211004 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | T | 720 | E | 2 | 20220818 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | T | 720 | insA | 1 | 20230217 |
| EPI_ISL_19728186 | NSP3 | hCoV-19/USA/NY-URMC-P3S1T949-1/2025 | T | 720 | A | 124 | 20250118 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | T | 720 | insP | 1 | 20210806 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | T | 720 | F | 4 | 20230404 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | T | 720 | H | 14 | 20221213 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | T | 720 | stop | 4 | 20221222 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | T | 720 | insLVI | 3 | 20220202 |
| EPI_ISL_19732637 | NSP3 | hCoV-19/Canada/ON-PHL-202503392/2025 | T | 720 | N | 459 | 20250204 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 720 | insLVIL | 1 | 20210801 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | T | 720 | insLV | 1 | 20220222 |
| EPI_ISL_19821364 | NSP3 | hCoV-19/Spain/EX-BA_42421770/2025 | T | 720 | I | 14196 | 20250321 |
| EPI_ISL_18362116 | NSP3 | hCoV-19/Singapore/R72MR113/2023 | T | 720 | V | 4 | 20231003 |
| EPI_ISL_17694944 | NSP3 | hCoV-19/Singapore/R32MR189/2023 | T | 720 | del | 51 | 20230508 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 720 | S | 13 | 20240307 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | T | 720 | insL | 1 | 20210803 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 720 | P | 2 | 20240123 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | T | 720 | insLVILPHSTstopMVK | 3 | 20210927 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 720 | K | 6 | 20230404 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 721 | E | 1 | 20230404 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | S | 721 | insVILPHSTstopMVKL | 3 | 20220721 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | S | 721 | P | 5 | 20210823 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | S | 721 | Y | 5 | 20240307 |
| EPI_ISL_19327973 | NSP3 | hCoV-19/Canada/NS-NSH-722266/2024 | S | 721 | T | 30 | 20240717 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | S | 721 | insVIL | 1 | 20220105 |
| EPI_ISL_18728656 | NSP3 | hCoV-19/USA/MD-CDC-QDX90322672/2023 | S | 721 | G | 165 | 20231215 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | S | 721 | L | 29 | 20221011 |
| EPI_ISL_5441241 | NSP3 | hCoV-19/USA/ID-IBL-758898/2021 | S | 721 | V | 3 | 20210918 |
| EPI_ISL_19384975 | NSP3 | hCoV-19/Hubei/HCDC-XY6521/2024 | S | 721 | R | 20 | 20240806 |
| EPI_ISL_19705299 | NSP3 | hCoV-19/USA/NM-NMDOH-2024040886/2024 | S | 721 | del | 385 | 20241215 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | S | 721 | H | 3 | 20220321 |
| EPI_ISL_18733280 | NSP3 | hCoV-19/South Korea/KDCA280249/2023 | S | 721 | C | 19 | 20230926 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | S | 721 | stop | 2 | 20220628 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | S | 721 | W | 1 | 20211109 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | S | 721 | I | 676 | 20250116 |
| EPI_ISL_19819492 | NSP3 | hCoV-19/Taiwan/CDC-W42120/2025 | S | 721 | N | 634 | 20250331 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | S | 721 | A | 1 | 20230217 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 721 | K | 4 | 20221226 |
| EPI_ISL_19589240 | NSP3 | hCoV-19/USA/NY-NYULH-21409/2024 | S | 721 | D | 11 | 20241107 |
| EPI_ISL_18158442 | NSP3 | hCoV-19/Denmark/DCGC-657222/2023 | N | 722 | I | 16 | 20230522 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | N | 722 | K | 163 | 20250116 |
| EPI_ISL_19797179 | NSP3 | hCoV-19/Ireland/CO-CUH-SC0004/2025 | N | 722 | S | 875 | 20250126 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | N | 722 | P | 20 | 20221213 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | N | 722 | Q | 1 | 20220823 |
| EPI_ISL_19179185 | NSP3 | hCoV-19/England/CLIMB-CM7YRDKZ/2024 | N | 722 | del | 104 | 20240521 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | N | 722 | M | 1 | 20210319 |
| EPI_ISL_18212528 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS_98425/2023 | N | 722 | B | 15 | 20230822 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | N | 722 | insL | 1 | 20210114 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | N | 722 | insSYTTTIK | 1 | 20230404 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 722 | C | 3 | 20220210 |
| EPI_ISL_18096034 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-6450/2023 | N | 722 | H | 14 | 20230531 |
| EPI_ISL_19682966 | NSP3 | hCoV-19/USA/NV-CDC-QDX28856956/2025 | N | 722 | D | 126 | 20250103 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | N | 722 | L | 6 | 20221226 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | N | 722 | insLHI | 1 | 20220810 |
| EPI_ISL_19281956 | NSP3 | hCoV-19/USA/MN-MDH-41965/2024 | N | 722 | T | 111 | 20240703 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | N | 722 | stop | 1 | 20220927 |
| EPI_ISL_19715711 | NSP3 | hCoV-19/USA/NY-NYULH-22052/2025 | N | 722 | Y | 109 | 20250129 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | N | 722 | G | 2 | 20220702 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | N | 722 | A | 1 | 20230410 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | N | 722 | V | 9 | 20220818 |
| EPI_ISL_2967523 | NSP3 | hCoV-19/South Korea/KDCA5811/2021 | P | 723 | Q | 1 | 20210630 |
| EPI_ISL_9476330 | NSP3 | hCoV-19/Brazil/SP-IB_149714/2022 | P | 723 | F | 2 | 20220113 |
| EPI_ISL_11887815 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0781/2022 | P | 723 | C | 2 | 20220109 |
| EPI_ISL_11887823 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0797/2022 | P | 723 | Y | 1 | 20220117 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | P | 723 | N | 3 | 20230420 |
| EPI_ISL_11436061 | NSP3 | hCoV-19/USA/CO-CDPHE-2103013514/2022 | P | 723 | R | 3 | 20220302 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | P | 723 | V | 4 | 20240123 |
| EPI_ISL_19805729 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U808-1/2025 | P | 723 | S | 2220 | 20250312 |
| EPI_ISL_15292714 | NSP3 | hCoV-19/India/MH-NCCS-2748700699199/2021 | P | 723 | stop | 2 | 20211212 |
| EPI_ISL_18779518 | NSP3 | hCoV-19/USA/CT-Yale-25260/2023 | P | 723 | T | 52 | 20231109 |
| EPI_ISL_19179185 | NSP3 | hCoV-19/England/CLIMB-CM7YRDKZ/2024 | P | 723 | del | 101 | 20240521 |
| EPI_ISL_17068123 | NSP3 | hCoV-19/USA/UT-UPHL-230224152685/2023 | P | 723 | H | 49 | 20230213 |
| EPI_ISL_19252947 | NSP3 | hCoV-19/England/CLIMB-CM7YF13O/2024 | P | 723 | A | 7 | 20240617 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | P | 723 | W | 1 | 20240307 |
| EPI_ISL_19335273 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143591/2024 | P | 723 | L | 630 | 20240722 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | P | 723 | E | 2 | 20230217 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | P | 723 | I | 7 | 20211019 |
| EPI_ISL_1475588 | NSP3 | hCoV-19/England/OXON-F78F9E/2021 | T | 724 | insPPRWstop | 1 | 20210223 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | T | 724 | insRstop | 1 | 20210817 |
| EPI_ISL_17565511 | NSP3 | hCoV-19/Austria/AGES-1135580/2023 | T | 724 | del | 62 | 20230413 |
| EPI_ISL_486673 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0099/2020 | T | 724 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20200501 |
| EPI_ISL_15292714 | NSP3 | hCoV-19/India/MH-NCCS-2748700699199/2021 | T | 724 | stop | 3 | 20211212 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | T | 724 | V | 11 | 20250116 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | T | 724 | R | 14 | 20221213 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 724 | D | 2 | 20240307 |
| EPI_ISL_19672150 | NSP3 | hCoV-19/France/ARA-HCL025001686001/2025 | T | 724 | N | 357 | 20250105 |
| EPI_ISL_19428677 | NSP3 | hCoV-19/USA/NJ-PHEL-V24010037-rep1/2024 | T | 724 | A | 87 | 20240817 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | T | 724 | insIPPRWstop | 4 | 20230401 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 724 | S | 20 | 20240123 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | T | 724 | P | 7 | 20220810 |
| EPI_ISL_4122697 | NSP3 | hCoV-19/England/PHEC-X308XC2F/2021 | T | 724 | insK | 1 | 20210824 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | T | 724 | insRWstop | 1 | 20220810 |
| EPI_ISL_17591923 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3206/2023 | T | 724 | H | 2 | 20230417 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | T | 724 | Y | 2 | 20210812 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | T | 724 | K | 4 | 20230404 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | T | 724 | L | 20 | 20230302 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | T | 724 | W | 1 | 20210802 |
| EPI_ISL_19831430 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56931/2025 | T | 724 | I | 12006 | 20250406 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | T | 724 | insWstop | 14 | 20221213 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | T | 725 | P | 7 | 20221201 |
| EPI_ISL_17229558 | NSP3 | hCoV-19/Japan/TKYnat12312/2023 | T | 725 | R | 6 | 20230209 |
| EPI_ISL_15318401 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N8/2022 | T | 725 | insNPPLTILRH | 1 | 20221011 |
| EPI_ISL_8882801 | NSP3 | hCoV-19/India/GA-NCCS-VH74813/2021 | T | 725 | N | 1 | 20210613 |
| EPI_ISL_3980366 | NSP3 | hCoV-19/Sweden/UUH-000200122876/2021 | T | 725 | insXXXX | 1 | 20210819 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 725 | F | 2 | 20221226 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | T | 725 | insILRH | 3 | 20210927 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | T | 725 | C | 1 | 20210401 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | T | 725 | stop | 2 | 20220628 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | T | 725 | Q | 2 | 20220823 |
| EPI_ISL_10082615 | NSP3 | hCoV-19/USA/ID-IBL-789742/2022 | T | 725 | H | 3 | 20220126 |
| EPI_ISL_18775663 | NSP3 | hCoV-19/USA/VA-GBW-H20-353-2905/2024 | T | 725 | del | 72 | 20240103 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | T | 725 | L | 11 | 20230420 |
| EPI_ISL_19810667 | NSP3 | hCoV-19/Sweden/C-000200844873N2/2025 | T | 725 | A | 534 | 20250227 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 725 | V | 12 | 20240123 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | T | 725 | G | 1 | 20220427 |
| EPI_ISL_18510695 | NSP3 | hCoV-19/USA/MN-MDH-37419/2023 | T | 725 | S | 67 | 20231102 |
| EPI_ISL_19394945 | NSP3 | hCoV-19/USA/MD-CDC-LC1118705/2024 | T | 725 | K | 753 | 20240829 |
| EPI_ISL_19826028 | NSP3 | hCoV-19/Singapore/Y25R15MSC12/2025 | T | 725 | I | 39297 | 20250404 |
| EPI_ISL_18560725 | NSP3 | hCoV-19/Spain/GA-44104408/2023 | T | 725 | M | 1 | 20231114 |
| EPI_ISL_4530188 | NSP3 | hCoV-19/England/PHEC-3G073G85/2021 | F | 726 | Q | 1 | 20210919 |
| EPI_ISL_4530197 | NSP3 | hCoV-19/England/PHEC-3G074G19/2021 | F | 726 | H | 2 | 20210919 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | F | 726 | insLR | 3 | 20220721 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | F | 726 | Y | 65 | 20250116 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | F | 726 | insPPRWstopDY | 1 | 20210805 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | F | 726 | P | 4 | 20221130 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | F | 726 | A | 5 | 20220509 |
| EPI_ISL_17565511 | NSP3 | hCoV-19/Austria/AGES-1135580/2023 | F | 726 | del | 69 | 20230413 |
| EPI_ISL_16814844 | NSP3 | hCoV-19/Spain/AS-232301242/2023 | F | 726 | I | 9 | 20230113 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | F | 726 | R | 3 | 20230217 |
| EPI_ISL_12321745 | NSP3 | hCoV-19/Turkey/HSGM-GS2496/2022 | F | 726 | C | 1 | 20220405 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | F | 726 | stop | 5 | 20221222 |
| EPI_ISL_19553071 | NSP3 | hCoV-19/Canada/QC-L00810171001/2024 | F | 726 | L | 149 | 20241105 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | F | 726 | M | 2 | 20220628 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | F | 726 | V | 14 | 20230420 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | F | 726 | T | 4 | 20240123 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | F | 726 | D | 3 | 20220702 |
| EPI_ISL_19696817 | NSP3 | hCoV-19/Turkey/HSGM-AA000465/2024 | F | 726 | S | 9 | 20240304 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | F | 726 | E | 1 | 20210401 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | H | 727 | K | 10 | 20250116 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | H | 727 | G | 1 | 20220823 |
| EPI_ISL_19802454 | NSP3 | hCoV-19/USA/CO-CDPHE-43205469/2025 | H | 727 | R | 488 | 20250220 |
| EPI_ISL_19828186 | NSP3 | hCoV-19/Australia/QLD0x0154E1/2025 | H | 727 | Y | 3627 | 20250401 |
| EPI_ISL_15729693 | NSP3 | hCoV-19/France/BFC-HMN-22102270268/2022 | H | 727 | D | 6 | 20221024 |
| EPI_ISL_15318401 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N8/2022 | H | 727 | F | 4 | 20221011 |
| EPI_ISL_19559851 | NSP3 | hCoV-19/South Korea/KDCA-296342/2024 | H | 727 | Q | 696 | 20241029 |
| EPI_ISL_8751562 | NSP3 | hCoV-19/USA/NY-PA-PBRI-J003/2022 | H | 727 | C | 1 | 20220110 |
| EPI_ISL_10858375 | NSP3 | hCoV-19/Turkey/HSGM-G2095/2022 | H | 727 | T | 2 | 20220217 |
| EPI_ISL_18301815 | NSP3 | hCoV-19/Italy/LOM-69468829/2023 | H | 727 | P | 7 | 20230914 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | H | 727 | V | 4 | 20220818 |
| EPI_ISL_18052799 | NSP3 | hCoV-19/India/MH-ICMR-NIV-233545/2023 | H | 727 | insI | 1 | 20230701 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | H | 727 | S | 11 | 20240307 |
| EPI_ISL_19828198 | NSP3 | hCoV-19/Australia/QLD0x0154F5/2025 | H | 727 | N | 329 | 20250325 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | H | 727 | stop | 1 | 20220222 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | H | 727 | M | 6 | 20221222 |
| EPI_ISL_17565511 | NSP3 | hCoV-19/Austria/AGES-1135580/2023 | H | 727 | del | 51 | 20230413 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | H | 727 | I | 3 | 20221226 |
| EPI_ISL_19168986 | NSP3 | hCoV-19/Canada/SK-RRPL-704073/2024 | H | 727 | L | 57 | 20240229 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | H | 727 | insPstop | 1 | 20211222 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 728 | A | 1 | 20210318 |
| EPI_ISL_19769324 | NSP3 | hCoV-19/Greece/Pedy-6/2025 | L | 728 | I | 718 | 20250127 |
| EPI_ISL_16284089 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223160978/2022 | L | 728 | insDGEVITFDNLKTLLSLREVRTNPTTFHL | 1 | 20221112 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | L | 728 | R | 6 | 20230217 |
| EPI_ISL_19059120 | NSP3 | hCoV-19/USA/IL-RIPHL_81334_G/2024 | L | 728 | V | 18 | 20240202 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | L | 728 | M | 2 | 20220222 |
| EPI_ISL_13346222 | NSP3 | hCoV-19/USA/ID-IBL-824806/2022 | L | 728 | insPP | 3 | 20220601 |
| EPI_ISL_11234313 | NSP3 | hCoV-19/USA/FL-BPHL-3794/2022 | L | 728 | P | 4 | 20220110 |
| EPI_ISL_7492735 | NSP3 | hCoV-19/USA/ID-IBL-774047/2021 | L | 728 | G | 1 | 20211201 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | L | 728 | insstopQSstop | 1 | 20210815 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | L | 728 | insstopQ | 5 | 20220117 |
| EPI_ISL_17565511 | NSP3 | hCoV-19/Austria/AGES-1135580/2023 | L | 728 | del | 49 | 20230413 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | L | 728 | F | 4 | 20220721 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | L | 728 | E | 1 | 20221011 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | L | 728 | K | 4 | 20220427 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | L | 728 | S | 8 | 20221130 |
| EPI_ISL_19770382 | NSP3 | hCoV-19/Spain/AS-HUCA-232515976/2025 | L | 728 | J | 21 | 20250224 |
| EPI_ISL_16814844 | NSP3 | hCoV-19/Spain/AS-232301242/2023 | L | 728 | D | 1 | 20230113 |
| EPI_ISL_16984034 | NSP3 | hCoV-19/Japan/PG-445692/2022 | L | 728 | N | 3 | 20220823 |
| EPI_ISL_17101310 | NSP3 | hCoV-19/USA/MN-MDH-34337/2023 | L | 728 | Q | 43 | 20230216 |
| EPI_ISL_12934306 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1526/2022 | L | 728 | H | 1 | 20220107 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | L | 728 | stop | 1 | 20200729 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | L | 728 | insstopEK | 3 | 20210927 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | L | 728 | Y | 1 | 20210802 |
| EPI_ISL_14814415 | NSP3 | hCoV-19/India/OR-RMRC_B-ICMR-INSACOG-BBS428618/2022 | L | 728 | T | 4 | 20220808 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | D | 729 | stop | 9 | 20220604 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | D | 729 | L | 1 | 20210801 |
| EPI_ISL_19365679 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-144736/2024 | D | 729 | A | 179 | 20240809 |
| EPI_ISL_16241860 | NSP3 | hCoV-19/Japan/RIMD15618/2022 | D | 729 | V | 5 | 20220728 |
| EPI_ISL_19739327 | NSP3 | hCoV-19/USA/NY-CDC-LC1131579/2025 | D | 729 | B | 23 | 20250203 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | D | 729 | S | 12 | 20230217 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | D | 729 | del | 61 | 20230404 |
| EPI_ISL_19065271 | NSP3 | hCoV-19/South Korea/KDCA290526/2024 | D | 729 | H | 24 | 20240325 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | D | 729 | Q | 1 | 20230217 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | D | 729 | F | 4 | 20220721 |
| EPI_ISL_17372580 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2625/2023 | D | 729 | K | 9 | 20230120 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | D | 729 | I | 2 | 20220628 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | D | 729 | insLstopEKstop | 4 | 20220721 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | D | 729 | insWX | 1 | 20230217 |
| EPI_ISL_19822555 | NSP3 | hCoV-19/Belgium/Sciensano-LS-G0453/2025 | D | 729 | G | 838 | 20250311 |
| EPI_ISL_15982796 | NSP3 | hCoV-19/Brazil/MG_LBI_1321/2021 | D | 729 | insVNK | 1 | 20211218 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | D | 729 | M | 1 | 20200729 |
| EPI_ISL_7492735 | NSP3 | hCoV-19/USA/ID-IBL-774047/2021 | D | 729 | W | 1 | 20211201 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | D | 729 | P | 13 | 20221003 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | D | 729 | insI | 2 | 20210823 |
| EPI_ISL_19340653 | NSP3 | hCoV-19/South Korea/KDCA293904/2024 | D | 729 | E | 288 | 20240722 |
| EPI_ISL_19760340 | NSP3 | hCoV-19/USA/MD-CDC-LC1133566/2025 | D | 729 | N | 928 | 20250218 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | D | 729 | T | 8 | 20221130 |
| EPI_ISL_19826749 | NSP3 | hCoV-19/USA/MN-MDH-46612/2025 | D | 729 | Y | 4358 | 20250401 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | G | 730 | stop | 16 | 20221130 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | G | 730 | P | 6 | 20221003 |
| EPI_ISL_16984034 | NSP3 | hCoV-19/Japan/PG-445692/2022 | G | 730 | K | 2 | 20220823 |
| EPI_ISL_13184488 | NSP3 | hCoV-19/Sweden/38084902XXP/2022 | G | 730 | V | 26 | 20220516 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | G | 730 | del | 60 | 20230404 |
| EPI_ISL_19368601 | NSP3 | hCoV-19/France/PDL-IPP09165/2024 | G | 730 | C | 173 | 20240805 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | G | 730 | N | 4 | 20220702 |
| EPI_ISL_19788456 | NSP3 | hCoV-19/Japan/7GA-063/2025 | G | 730 | D | 646 | 20250304 |
| EPI_ISL_19773770 | NSP3 | hCoV-19/Hong Kong/HKDH-VB25076047/2025 | G | 730 | S | 1334 | 20250302 |
| EPI_ISL_19387438 | NSP3 | hCoV-19/USA/CO-CDPHE-42180067/2024 | G | 730 | A | 10 | 20240722 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | G | 730 | T | 5 | 20220818 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | G | 730 | insTQMV | 1 | 20210802 |
| EPI_ISL_2308017 | NSP3 | hCoV-19/Switzerland/ZH-ETHZ-620023/2021 | G | 730 | M | 1 | 20210507 |
| EPI_ISL_15471644 | NSP3 | hCoV-19/Japan/PG-378207/2022 | G | 730 | Q | 2 | 20221011 |
| EPI_ISL_15292714 | NSP3 | hCoV-19/India/MH-NCCS-2748700699199/2021 | G | 730 | insRC | 1 | 20211212 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | G | 730 | L | 6 | 20220823 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | G | 730 | W | 1 | 20220427 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | G | 730 | E | 1 | 20211230 |
| EPI_ISL_18687535 | NSP3 | hCoV-19/South Korea/KDCA277990/2023 | G | 730 | R | 15 | 20231123 |
| EPI_ISL_11887812 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0776/2022 | E | 731 | N | 1 | 20220123 |
| EPI_ISL_17275295 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45820/2023 | E | 731 | Z | 4 | 20230217 |
| EPI_ISL_19760699 | NSP3 | hCoV-19/USA/NM-NMDOH-2025000239/2024 | E | 731 | K | 260 | 20241228 |
| EPI_ISL_19348696 | NSP3 | hCoV-19/Morocco/22/2020 | E | 731 | I | 1 | 20201101 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | E | 731 | L | 9 | 20220721 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | E | 731 | W | 1 | 20220321 |
| EPI_ISL_19525899 | NSP3 | hCoV-19/USA/NY-URMC-P0S1R903-1/2024 | E | 731 | G | 568 | 20241003 |
| EPI_ISL_18301815 | NSP3 | hCoV-19/Italy/LOM-69468829/2023 | E | 731 | S | 9 | 20230914 |
| EPI_ISL_16982324 | NSP3 | hCoV-19/USA/GA-GBW-H20-286-8274/2023 | E | 731 | stop | 6 | 20230210 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | E | 731 | R | 5 | 20221003 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | E | 731 | del | 57 | 20230404 |
| EPI_ISL_19666407 | NSP3 | hCoV-19/Chile/ML-ISPC-101085/2024 | E | 731 | D | 355 | 20241217 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 731 | V | 32 | 20250116 |
| EPI_ISL_19475403 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-2048/2024 | E | 731 | A | 200 | 20240917 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | E | 731 | P | 5 | 20230410 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | E | 731 | insRstopstopKCILHSV | 1 | 20210812 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | E | 731 | T | 1 | 20220602 |
| EPI_ISL_18322307 | NSP3 | hCoV-19/USA/TX-HMH-M-133573/2023 | E | 731 | Q | 18 | 20230908 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | E | 731 | M | 8 | 20221130 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | V | 732 | P | 4 | 20220202 |
| EPI_ISL_18385484 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482893/2023 | V | 732 | D | 8 | 20231004 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | V | 732 | M | 8 | 20240123 |
| EPI_ISL_10170291 | NSP3 | hCoV-19/Northern Ireland/NIRE-016565/2021 | V | 732 | G | 3 | 20211129 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | V | 732 | stop | 2 | 20220321 |
| EPI_ISL_19782151 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10843/2025 | V | 732 | I | 621 | 20250227 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | V | 732 | del | 42 | 20230217 |
| EPI_ISL_11385204 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-49/2022 | V | 732 | S | 2 | 20220225 |
| EPI_ISL_19707688 | NSP3 | hCoV-19/Japan/TKYnat18279/2025 | V | 732 | F | 3394 | 20250106 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | V | 732 | K | 3 | 20220818 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | V | 732 | L | 52 | 20230404 |
| EPI_ISL_11355262 | NSP3 | hCoV-19/France/GES-ChNa-210064702401/2021 | V | 732 | insK | 1 | 20210810 |
| EPI_ISL_16984034 | NSP3 | hCoV-19/Japan/PG-445692/2022 | V | 732 | E | 2 | 20220823 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | V | 732 | T | 6 | 20220117 |
| EPI_ISL_19820204 | NSP3 | hCoV-19/USA/NY-PRL-250401_81B11/2025 | V | 732 | A | 631 | 20250321 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | V | 732 | W | 4 | 20221003 |
| EPI_ISL_11794205 | NSP3 | hCoV-19/Pakistan/NIH-PAK-NC295/2021 | I | 733 | J | 22 | 20210829 |
| EPI_ISL_16079991 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-22-32257/2022 | I | 733 | M | 4 | 20221109 |
| EPI_ISL_18730801 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-20L-MM00001U/2023 | I | 733 | F | 12 | 20231220 |
| EPI_ISL_19660168 | NSP3 | hCoV-19/Italy/FVG-TS-65331758/2024 | I | 733 | L | 39 | 20241218 |
| EPI_ISL_16242012 | NSP3 | hCoV-19/Japan/RIMD15770/2022 | I | 733 | N | 10 | 20220728 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | I | 733 | stop | 4 | 20221003 |
| EPI_ISL_19827290 | NSP3 | hCoV-19/Chile/NB-ISPC-23960/2025 | I | 733 | V | 2183 | 20250313 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | I | 733 | K | 1 | 20210806 |
| EPI_ISL_17697673 | NSP3 | hCoV-19/Guangdong/GDCDC_YF_0115/2023 | I | 733 | S | 62 | 20230428 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 733 | D | 3 | 20220210 |
| EPI_ISL_19733114 | NSP3 | hCoV-19/Canada/AB-ABPHL-131110/2025 | I | 733 | T | 2254 | 20250130 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | I | 733 | insLP | 1 | 20210414 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | I | 733 | Y | 1 | 20220812 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | I | 733 | R | 8 | 20220721 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | I | 733 | A | 3 | 20240123 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | I | 733 | H | 1 | 20221226 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 733 | C | 12 | 20250116 |
| EPI_ISL_11379679 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-3989/2022 | I | 733 | P | 1 | 20220108 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | I | 733 | insKSS | 1 | 20210809 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | I | 733 | insER | 1 | 20210815 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | I | 733 | W | 1 | 20210717 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | I | 733 | del | 49 | 20230217 |
| EPI_ISL_19824737 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-032041/2025 | T | 734 | A | 388 | 20250326 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 734 | F | 6 | 20221226 |
| EPI_ISL_19040983 | NSP3 | hCoV-19/Hubei/HCDC-XY4533/2024 | T | 734 | M | 3 | 20240309 |
| EPI_ISL_9476302 | NSP3 | hCoV-19/Brazil/SP-IB_149716/2022 | T | 734 | R | 3 | 20220113 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | T | 734 | V | 2 | 20221003 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | T | 734 | C | 7 | 20220721 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | T | 734 | L | 6 | 20220602 |
| EPI_ISL_11355262 | NSP3 | hCoV-19/France/GES-ChNa-210064702401/2021 | T | 734 | H | 2 | 20210810 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | T | 734 | Y | 3 | 20220321 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | T | 734 | insG | 1 | 20230217 |
| EPI_ISL_19805064 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12695-P0/2025 | T | 734 | I | 1319 | 20250305 |
| EPI_ISL_19638273 | NSP3 | hCoV-19/Greece/PEDY-57/2024 | T | 734 | N | 655 | 20241206 |
| EPI_ISL_18777170 | NSP3 | hCoV-19/Canada/BC-BCCDC-689755/2023 | T | 734 | S | 369 | 20231221 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 734 | D | 2 | 20210424 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | T | 734 | insCILHstopstopSYHIPPRWstopSYH | 1 | 20220519 |
| EPI_ISL_979248 | NSP3 | hCoV-19/Slovenia/NK7693/2020 | T | 734 | insKVKTFNFLRV | 1 | 20201214 |
| EPI_ISL_14881050 | NSP3 | hCoV-19/USA/ID-IBL-845683/2022 | T | 734 | insstopI | 1 | 20220812 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | T | 734 | K | 3 | 20220519 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | T | 734 | del | 59 | 20230302 |
| EPI_ISL_18071813 | NSP3 | hCoV-19/Colombia/DC-INS-VG-30369/2023 | T | 734 | P | 40 | 20230706 |
| EPI_ISL_19363212 | NSP3 | hCoV-19/New Zealand/24YA6109/2024 | F | 735 | V | 32 | 20240724 |
| EPI_ISL_7492735 | NSP3 | hCoV-19/USA/ID-IBL-774047/2021 | F | 735 | W | 3 | 20211201 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | F | 735 | E | 6 | 20230404 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | F | 735 | stop | 5 | 20221222 |
| EPI_ISL_951321 | NSP3 | hCoV-19/England/OXON-F52677/2021 | F | 735 | J | 1 | 20210104 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | F | 735 | T | 2 | 20221226 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | F | 735 | G | 3 | 20220818 |
| EPI_ISL_17037109 | NSP3 | hCoV-19/Chile/TA-ISPC-1307/2021 | F | 735 | M | 3 | 20211230 |
| EPI_ISL_19560286 | NSP3 | hCoV-19/Canada/AB-ABPHL-127213/2024 | F | 735 | Y | 40 | 20241108 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | F | 735 | A | 1 | 20210521 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | F | 735 | I | 36 | 20241113 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | F | 735 | P | 4 | 20220812 |
| EPI_ISL_19326976 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YG1TR/2024 | F | 735 | S | 59 | 20240717 |
| EPI_ISL_19803778 | NSP3 | hCoV-19/USA/WI-WSLH-2500649/2025 | F | 735 | L | 885 | 20250131 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | F | 735 | del | 57 | 20230302 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | F | 735 | insstop | 2 | 20211219 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | F | 735 | insHLstopQPstop | 1 | 20210915 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | F | 735 | insXX | 1 | 20220702 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | F | 735 | insHL | 1 | 20220927 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | F | 735 | R | 4 | 20230217 |
| EPI_ISL_19178951 | NSP3 | hCoV-19/Japan/FR015-0099/2024 | F | 735 | C | 14 | 20240424 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | F | 735 | H | 2 | 20220602 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | F | 735 | N | 1 | 20210424 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | D | 736 | S | 5 | 20220628 |
| EPI_ISL_19498221 | NSP3 | hCoV-19/Denmark/DCGC-689877/2024 | D | 736 | E | 122 | 20241007 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | D | 736 | del | 54 | 20230410 |
| EPI_ISL_8425960 | NSP3 | hCoV-19/USA/VA-CDC-ASC210567226/2021 | D | 736 | K | 3 | 20211222 |
| EPI_ISL_19829085 | NSP3 | hCoV-19/USA/MD-CDC-LC1136481/2025 | D | 736 | Y | 1268 | 20250331 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | D | 736 | R | 5 | 20230404 |
| EPI_ISL_19198162 | NSP3 | hCoV-19/England/CLIMB-CM7YGDMC/2024 | D | 736 | V | 62 | 20240522 |
| EPI_ISL_15784145 | NSP3 | hCoV-19/Australia/TAS004131/2022 | D | 736 | B | 7 | 20221104 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | D | 736 | I | 7 | 20230404 |
| EPI_ISL_19686117 | NSP3 | hCoV-19/USA/MI-UM-10061141416/2024 | D | 736 | A | 260 | 20241205 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | D | 736 | P | 9 | 20230401 |
| EPI_ISL_17192922 | NSP3 | hCoV-19/Canada/ON-PHL-23-15897/2023 | D | 736 | H | 21 | 20230302 |
| EPI_ISL_19742606 | NSP3 | hCoV-19/Chile/AP-9604/2025 | D | 736 | N | 263 | 20250130 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | D | 736 | Q | 15 | 20230217 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | D | 736 | stop | 2 | 20220321 |
| EPI_ISL_19788456 | NSP3 | hCoV-19/Japan/7GA-063/2025 | D | 736 | G | 688 | 20250304 |
| EPI_ISL_19195381 | NSP3 | hCoV-19/env/Germany/BY-LGL-6256148/2024 | D | 736 | T | 24 | 20240527 |
| EPI_ISL_1202084 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-12135/2020 | N | 737 | insF | 1 | 20200921 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | N | 737 | E | 7 | 20230404 |
| EPI_ISL_19831570 | NSP3 | hCoV-19/Germany/NW-RKI-I-1148053/2025 | N | 737 | S | 1105 | 20250324 |
| EPI_ISL_19646609 | NSP3 | hCoV-19/Singapore/Y25R1MSC18/2024 | N | 737 | T | 154 | 20241226 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | N | 737 | F | 1 | 20220812 |
| EPI_ISL_17539683 | NSP3 | hCoV-19/Singapore/R24MR358/2023 | N | 737 | B | 41 | 20230411 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | N | 737 | G | 3 | 20230614 |
| EPI_ISL_18720591 | NSP3 | hCoV-19/Australia/WA15694/2023 | N | 737 | H | 25 | 20231130 |
| EPI_ISL_19755674 | NSP3 | hCoV-19/USA/IL-RIPHL_81582_G/2025 | N | 737 | D | 3070 | 20250128 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | N | 737 | Q | 10 | 20230217 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | N | 737 | stop | 2 | 20220628 |
| EPI_ISL_8806461 | NSP3 | hCoV-19/India/GA-NCCS-3055200162983/2021 | N | 737 | R | 4 | 20210819 |
| EPI_ISL_19195381 | NSP3 | hCoV-19/env/Germany/BY-LGL-6256148/2024 | N | 737 | I | 32 | 20240527 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | N | 737 | del | 39 | 20230410 |
| EPI_ISL_19709994 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56198/2025 | N | 737 | Y | 57 | 20250122 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | N | 737 | L | 5 | 20220726 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | N | 737 | P | 3 | 20221226 |
| EPI_ISL_19822340 | NSP3 | hCoV-19/New Zealand/25YA0788/2025 | N | 737 | K | 116 | 20250318 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | N | 737 | V | 3 | 20220702 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 738 | N | 1 | 20221226 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | L | 738 | V | 42 | 20230404 |
| EPI_ISL_3543373 | NSP3 | hCoV-19/USA/ID-IBL-631356/2020 | L | 738 | insLstopQSstop | 1 | 20200715 |
| EPI_ISL_17062648 | NSP3 | hCoV-19/Thailand/NIC_CMI_683/2023 | L | 738 | A | 1 | 20230124 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | L | 738 | stop | 19 | 20230217 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | L | 738 | P | 14 | 20230404 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 738 | insN | 3 | 20220509 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | L | 738 | W | 1 | 20200729 |
| EPI_ISL_19680758 | NSP3 | hCoV-19/Japan/FR025-0334/2024 | L | 738 | F | 1360 | 20240916 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | L | 738 | C | 1 | 20230614 |
| EPI_ISL_17237341 | NSP3 | hCoV-19/USA/PA-CDC-LC1025833/2023 | L | 738 | J | 8 | 20230302 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 738 | Q | 1 | 20220812 |
| EPI_ISL_12146141 | NSP3 | hCoV-19/Turkey/HSGM-GS1600/2022 | L | 738 | R | 3 | 20220401 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 738 | del | 32 | 20230410 |
| EPI_ISL_11125574 | NSP3 | hCoV-19/Finland/THL-202208207/2022 | L | 738 | H | 2 | 20220228 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | L | 738 | S | 16 | 20230401 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | L | 738 | E | 3 | 20220818 |
| EPI_ISL_19537627 | NSP3 | hCoV-19/Sweden/U-R835380/2024 | L | 738 | I | 203 | 20241010 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | L | 738 | T | 3 | 20230217 |
| EPI_ISL_12584044 | NSP3 | hCoV-19/Turkey/HSGM-GS2943/2022 | L | 738 | G | 1 | 20220407 |
| EPI_ISL_15982715 | NSP3 | hCoV-19/Brazil/MG_LBI_1228/2021 | K | 739 | Y | 2 | 20211217 |
| EPI_ISL_16372303 | NSP3 | hCoV-19/USA/ID-IBL-870958/2022 | K | 739 | D | 18 | 20221222 |
| EPI_ISL_17021233 | NSP3 | hCoV-19/Chile/RM-199223/2021 | K | 739 | P | 3 | 20211227 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | K | 739 | insHFFLstopEKstopGLLRCLQQstopT | 1 | 20210526 |
| EPI_ISL_17984170 | NSP3 | hCoV-19/South Korea/KDCA249353/2023 | K | 739 | M | 16 | 20230622 |
| EPI_ISL_19824746 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-031570/2025 | K | 739 | R | 412 | 20250312 |
| EPI_ISL_19693324 | NSP3 | hCoV-19/USA/MI-UM-10061522129/2024 | K | 739 | E | 100 | 20241229 |
| EPI_ISL_17294448 | NSP3 | hCoV-19/South Korea/KDCA221733/2023 | K | 739 | stop | 1 | 20230304 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | K | 739 | insCLQQstopA | 1 | 20210815 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | K | 739 | del | 32 | 20230410 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 739 | A | 1 | 20220210 |
| EPI_ISL_11887823 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0797/2022 | K | 739 | V | 1 | 20220117 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | K | 739 | H | 4 | 20220427 |
| EPI_ISL_19312325 | NSP3 | hCoV-19/Wales/CLIMB-CM7Y8KXJ/2024 | K | 739 | N | 481 | 20240724 |
| EPI_ISL_18580300 | NSP3 | hCoV-19/USA/NJ-CDC-LC1067003/2023 | K | 739 | Q | 10 | 20231018 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | K | 739 | F | 1 | 20210915 |
| EPI_ISL_18852044 | NSP3 | hCoV-19/France/GES-IPP01388/2024 | K | 739 | T | 66 | 20240115 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | K | 739 | S | 14 | 20221226 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | K | 739 | insD | 1 | 20211222 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 740 | G | 1 | 20220812 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | T | 740 | Y | 2 | 20211122 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | T | 740 | insstopD | 1 | 20220726 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | T | 740 | C | 3 | 20220823 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | T | 740 | L | 2 | 20220818 |
| EPI_ISL_19785114 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13850/2024 | T | 740 | A | 204 | 20241209 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | T | 740 | R | 6 | 20230614 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | T | 740 | stop | 6 | 20230401 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | T | 740 | N | 6 | 20220427 |
| EPI_ISL_18971651 | NSP3 | hCoV-19/Henan/PYCDC-LG0156/2024 | T | 740 | S | 12 | 20240219 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | T | 740 | H | 16 | 20220623 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | T | 740 | F | 2 | 20210915 |
| EPI_ISL_19673801 | NSP3 | hCoV-19/Sichuan/ZGCDC-ZGXG2025006/2024 | T | 740 | K | 188 | 20241217 |
| EPI_ISL_14795935 | NSP3 | hCoV-19/Sweden/03_SE600_500000037791SP/2022 | T | 740 | insLLS | 1 | 20220113 |
| EPI_ISL_17825648 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00005942/2023 | T | 740 | P | 24 | 20230105 |
| EPI_ISL_8806461 | NSP3 | hCoV-19/India/GA-NCCS-3055200162983/2021 | T | 740 | D | 4 | 20210819 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | T | 740 | V | 6 | 20220702 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | T | 740 | del | 34 | 20230410 |
| EPI_ISL_19819797 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJ5GE/2025 | T | 740 | I | 1750 | 20250313 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | L | 741 | S | 29 | 20221213 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | L | 741 | insRQ | 1 | 20230614 |
| EPI_ISL_19186073 | NSP3 | hCoV-19/Canada/BC-BCCDC-713649/2024 | L | 741 | H | 22 | 20240512 |
| EPI_ISL_19806558 | NSP3 | hCoV-19/Canada/ON-HSC-202501053-v1/2025 | L | 741 | R | 229 | 20250129 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | L | 741 | K | 2 | 20220602 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 741 | Y | 7 | 20221226 |
| EPI_ISL_17062648 | NSP3 | hCoV-19/Thailand/NIC_CMI_683/2023 | L | 741 | C | 2 | 20230124 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | L | 741 | Q | 3 | 20230614 |
| EPI_ISL_15178999 | NSP3 | hCoV-19/USA/KY-CDC-LC0890272/2022 | L | 741 | J | 11 | 20220917 |
| EPI_ISL_19820042 | NSP3 | hCoV-19/Canada/ON-PHL-202504966/2025 | L | 741 | F | 3054 | 20250318 |
| EPI_ISL_17653631 | NSP3 | hCoV-19/USA/CA-CDC-QDX80078109/2023 | L | 741 | P | 5 | 20230503 |
| EPI_ISL_19822748 | NSP3 | hCoV-19/Finland/THL-01184/2025 | L | 741 | I | 382 | 20250317 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | L | 741 | E | 1 | 20210915 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | L | 741 | A | 3 | 20220818 |
| EPI_ISL_18237595 | NSP3 | hCoV-19/England/CLIMB-CM7YEZBK/2023 | L | 741 | V | 5 | 20230825 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 741 | del | 40 | 20230410 |
| EPI_ISL_12934306 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1526/2022 | L | 741 | insRH | 1 | 20220107 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | L | 741 | M | 6 | 20230401 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | L | 741 | insVstop | 1 | 20220427 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | L | 741 | T | 4 | 20220726 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | L | 741 | stop | 4 | 20220427 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | L | 742 | T | 21 | 20230217 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 742 | Y | 2 | 20221226 |
| EPI_ISL_19780808 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17335510/2025 | L | 742 | F | 221 | 20250212 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | L | 742 | K | 8 | 20230404 |
| EPI_ISL_18978344 | NSP3 | hCoV-19/USA/OR-OHSU-233330072/2023 | L | 742 | C | 1 | 20230817 |
| EPI_ISL_8806461 | NSP3 | hCoV-19/India/GA-NCCS-3055200162983/2021 | L | 742 | stop | 3 | 20210819 |
| EPI_ISL_19822512 | NSP3 | hCoV-19/Australia/QLD0x015495/2025 | L | 742 | I | 48 | 20250324 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | L | 742 | M | 2 | 20230614 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | L | 742 | V | 19 | 20230401 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | L | 742 | S | 1 | 20220124 |
| EPI_ISL_8807024 | NSP3 | hCoV-19/India/GA-NCCS-3055100255359/2021 | L | 742 | insstopN | 3 | 20211004 |
| EPI_ISL_11887823 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0797/2022 | L | 742 | A | 4 | 20220117 |
| EPI_ISL_18269036 | NSP3 | hCoV-19/USA/MS-MSPHL-0565/2023 | L | 742 | H | 2 | 20230816 |
| EPI_ISL_12320511 | NSP3 | hCoV-19/Turkey/HSGM-GS2170/2022 | L | 742 | P | 12 | 20220401 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | L | 742 | R | 6 | 20221003 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 742 | del | 33 | 20230410 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | L | 742 | J | 4 | 20241113 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | L | 742 | N | 3 | 20211011 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | S | 743 | insPYQSstopDTF | 1 | 20210812 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | S | 743 | V | 6 | 20230404 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | S | 743 | I | 10 | 20221130 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | S | 743 | L | 25 | 20220623 |
| EPI_ISL_19817226 | NSP3 | hCoV-19/England/CLIMB-CM7YMQEG/2025 | S | 743 | F | 427 | 20250226 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | S | 743 | insATWLCNTVstopNF | 1 | 20210622 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | S | 743 | del | 35 | 20230410 |
| EPI_ISL_19068650 | NSP3 | hCoV-19/USA/CA-CDPH-500136318/2024 | S | 743 | A | 338 | 20240306 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | S | 743 | N | 1 | 20210622 |
| EPI_ISL_19504669 | NSP3 | hCoV-19/Brazil/ES-LACENES-321632204/2024 | S | 743 | Y | 72 | 20240917 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | S | 743 | H | 3 | 20221003 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | S | 743 | K | 6 | 20230401 |
| EPI_ISL_14795935 | NSP3 | hCoV-19/Sweden/03_SE600_500000037791SP/2022 | S | 743 | E | 3 | 20220113 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | S | 743 | R | 2 | 20210805 |
| EPI_ISL_17591876 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3220/2023 | S | 743 | stop | 1 | 20230420 |
| EPI_ISL_19303495 | NSP3 | hCoV-19/USA/TN-UM-L8442235594799/2024 | S | 743 | P | 72 | 20240615 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | S | 743 | insPstopQ | 1 | 20220602 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | S | 743 | M | 1 | 20220812 |
| EPI_ISL_17591292 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC12116/2023 | S | 743 | G | 4 | 20230405 |
| EPI_ISL_18736619 | NSP3 | hCoV-19/Russia/SPE-MH155798S/2023 | S | 743 | T | 30 | 20231123 |
| EPI_ISL_3806771 | NSP3 | hCoV-19/Brazil/RS-LMM62319/2021 | S | 743 | D | 3 | 20210812 |
| EPI_ISL_19627892 | NSP3 | hCoV-19/Germany/BY-ChVirD24-23381/2024 | S | 743 | C | 191 | 20241129 |
| EPI_ISL_19449770 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08685/2024 | L | 744 | W | 9 | 20240911 |
| EPI_ISL_14588275 | NSP3 | hCoV-19/USA/ID-IBL-844609/2022 | L | 744 | G | 2 | 20220810 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | L | 744 | del | 33 | 20230410 |
| EPI_ISL_1051818 | NSP3 | hCoV-19/England/OXON-F64DF5/2021 | L | 744 | insPLGYVT | 1 | 20210114 |
| EPI_ISL_19603844 | NSP3 | hCoV-19/Honduras/AT-325/2024 | L | 744 | F | 246 | 20240816 |
| EPI_ISL_979250 | NSP3 | hCoV-19/Slovenia/NK7834/2020 | L | 744 | Q | 1 | 20201229 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | L | 744 | H | 1 | 20210719 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | L | 744 | E | 21 | 20221213 |
| EPI_ISL_19426176 | NSP3 | hCoV-19/Spain/VC-CVA_GRAL-125142/2024 | L | 744 | V | 429 | 20240714 |
| EPI_ISL_18269036 | NSP3 | hCoV-19/USA/MS-MSPHL-0565/2023 | L | 744 | M | 44 | 20230816 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | L | 744 | stop | 19 | 20220823 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 744 | insPLGYVTHGLNLEEAA | 1 | 20220509 |
| EPI_ISL_19660164 | NSP3 | hCoV-19/Italy/FVG-XX-65331706/2024 | L | 744 | S | 594 | 20241216 |
| EPI_ISL_17090589 | NSP3 | hCoV-19/South Korea/KDCA214641/2023 | L | 744 | C | 2 | 20230204 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | L | 744 | T | 11 | 20230217 |
| EPI_ISL_8892954 | NSP3 | hCoV-19/England/LSPA-326E2B4/2022 | L | 744 | K | 2 | 20220110 |
| EPI_ISL_14456675 | NSP3 | hCoV-19/Turkey/HSGM-IST-03664/2022 | L | 744 | insVILXHSXstopMVKLXPLXILRYXX | 1 | 20220702 |
| EPI_ISL_486673 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0099/2020 | L | 744 | P | 1 | 20200501 |
| EPI_ISL_17744298 | NSP3 | hCoV-19/USA/MO-20MU9599NPS/2021 | L | 744 | R | 1 | 20210813 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | L | 744 | I | 2 | 20230614 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | R | 745 | Q | 2 | 20211019 |
| EPI_ISL_18269036 | NSP3 | hCoV-19/USA/MS-MSPHL-0565/2023 | R | 745 | P | 1 | 20230816 |
| EPI_ISL_12582751 | NSP3 | hCoV-19/Turkey/HSGM-GS2213/2022 | R | 745 | A | 1 | 20220410 |
| EPI_ISL_10548457 | NSP3 | hCoV-19/USA/TN-ASC-210579659/2022 | R | 745 | insRLPPNYEFSYVLSRSFQASTWMA | 1 | 20220106 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | R | 745 | F | 2 | 20221003 |
| EPI_ISL_19359489 | NSP3 | hCoV-19/USA/TN-SPHL-2559/2024 | R | 745 | S | 119 | 20240220 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | R | 745 | L | 2 | 20210917 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | R | 745 | insHFFLstop | 2 | 20211019 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | R | 745 | M | 1 | 20220812 |
| EPI_ISL_11801921 | NSP3 | hCoV-19/England/LSPA-3C4000F/2022 | R | 745 | N | 3 | 20220325 |
| EPI_ISL_19363382 | NSP3 | hCoV-19/Japan/FR012-0444/2024 | R | 745 | I | 61 | 20240813 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | R | 745 | T | 15 | 20230404 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | R | 745 | E | 17 | 20220623 |
| EPI_ISL_17547363 | NSP3 | hCoV-19/Thailand/NIC_ATG_1225/2023 | R | 745 | del | 34 | 20230410 |
| EPI_ISL_19693529 | NSP3 | hCoV-19/Brazil/RR-IEC-25-001623/2025 | R | 745 | K | 433 | 20250103 |
| EPI_ISL_19666495 | NSP3 | hCoV-19/Chile/NB-ISPC-102785/2024 | R | 745 | G | 226 | 20241225 |
| EPI_ISL_8806461 | NSP3 | hCoV-19/India/GA-NCCS-3055200162983/2021 | R | 745 | Y | 1 | 20210819 |
| EPI_ISL_17591292 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC12116/2023 | R | 745 | stop | 10 | 20230405 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | R | 745 | H | 4 | 20211011 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | R | 745 | D | 1 | 20210915 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | E | 746 | del | 40 | 20240701 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | E | 746 | H | 8 | 20221130 |
| EPI_ISL_10992199 | NSP3 | hCoV-19/India/MH-RFIP09552/2022 | E | 746 | insVRTIKVFTT | 1 | 20220110 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | E | 746 | P | 6 | 20230401 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | E | 746 | T | 8 | 20230404 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | E | 746 | F | 1 | 20221003 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | E | 746 | Y | 2 | 20220509 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | E | 746 | C | 1 | 20211015 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | E | 746 | stop | 6 | 20220427 |
| EPI_ISL_19623986 | NSP3 | hCoV-19/Japan/FR302-1557/2024 | E | 746 | V | 132 | 20241105 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | E | 746 | R | 3 | 20220124 |
| EPI_ISL_19652542 | NSP3 | hCoV-19/Denmark/DCGC-691173/2024 | E | 746 | K | 445 | 20241202 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | E | 746 | Z | 2 | 20230217 |
| EPI_ISL_17182120 | NSP3 | hCoV-19/USA/TX-HMH-M-126102/2023 | E | 746 | insstopGL | 16 | 20230221 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | E | 746 | S | 26 | 20230217 |
| EPI_ISL_19413784 | NSP3 | hCoV-19/Japan/FR021-0780/2024 | E | 746 | A | 839 | 20240822 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | E | 746 | insR | 1 | 20230614 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 746 | L | 2 | 20220210 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | E | 746 | insFFLstopEKstopGL | 6 | 20221130 |
| EPI_ISL_19326359 | NSP3 | hCoV-19/Mexico/CMX-INER-INMEGEN-3092/2024 | E | 746 | Q | 11 | 20240624 |
| EPI_ISL_8806461 | NSP3 | hCoV-19/India/GA-NCCS-3055200162983/2021 | E | 746 | N | 1 | 20210819 |
| EPI_ISL_19334602 | NSP3 | hCoV-19/Egypt/CPHL-EGY24153/2024 | E | 746 | G | 68 | 20240623 |
| EPI_ISL_7407897 | NSP3 | hCoV-19/USA/CO-CDC-ASC210452280/2021 | E | 746 | insNQ | 1 | 20211110 |
| EPI_ISL_19774639 | NSP3 | hCoV-19/Slovenia/1002781/2024 | E | 746 | D | 231 | 20241226 |
| EPI_ISL_14795935 | NSP3 | hCoV-19/Sweden/03_SE600_500000037791SP/2022 | V | 747 | I | 3 | 20220113 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | V | 747 | insstopX | 1 | 20211015 |
| EPI_ISL_19541041 | NSP3 | hCoV-19/USA/UT-UPHL-241108479304/2024 | V | 747 | A | 1904 | 20241023 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | V | 747 | insFLstopEKstop | 1 | 20211109 |
| EPI_ISL_19334602 | NSP3 | hCoV-19/Egypt/CPHL-EGY24153/2024 | V | 747 | S | 7 | 20240623 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | V | 747 | insM | 1 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 747 | G | 11 | 20221226 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 747 | del | 37 | 20230404 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | V | 747 | N | 1 | 20210424 |
| EPI_ISL_19831426 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56927/2025 | V | 747 | M | 227 | 20250402 |
| EPI_ISL_12934304 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1524/2022 | V | 747 | insGLL | 1 | 20220107 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | V | 747 | E | 20 | 20221213 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | V | 747 | T | 4 | 20230217 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | V | 747 | insSDYstop | 1 | 20210802 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | V | 747 | K | 2 | 20211019 |
| EPI_ISL_19823432 | NSP3 | hCoV-19/Japan/FR021-0254/2025 | V | 747 | L | 1245 | 20250306 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | V | 747 | stop | 8 | 20220427 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | V | 747 | F | 4 | 20211109 |
| EPI_ISL_3543373 | NSP3 | hCoV-19/USA/ID-IBL-631356/2020 | V | 747 | insDYstop | 1 | 20200715 |
| EPI_ISL_19706729 | NSP3 | hCoV-19/Italy/PIE_IRCC_15801935/2025 | R | 748 | K | 530 | 20250118 |
| EPI_ISL_18535643 | NSP3 | hCoV-19/South Korea/KDCA273684/2023 | R | 748 | W | 17 | 20231109 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | R | 748 | insV | 1 | 20210403 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 748 | N | 2 | 20220210 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | R | 748 | F | 1 | 20210114 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | R | 748 | P | 2 | 20220818 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | R | 748 | L | 4 | 20211019 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | R | 748 | H | 1 | 20210424 |
| EPI_ISL_19781489 | NSP3 | hCoV-19/Brazil/CE-LACENCE-232518811/2025 | R | 748 | S | 1761 | 20250211 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | R | 748 | D | 27 | 20230404 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | R | 748 | V | 2 | 20220812 |
| EPI_ISL_18518995 | NSP3 | hCoV-19/USA/IL-RIPHL_160455_G/2023 | R | 748 | G | 42 | 20231016 |
| EPI_ISL_16480784 | NSP3 | hCoV-19/Japan/TKYkbm69670/2022 | R | 748 | Q | 3 | 20221208 |
| EPI_ISL_19539997 | NSP3 | hCoV-19/Denmark/DCGC-690498/2024 | R | 748 | M | 242 | 20241028 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | R | 748 | del | 38 | 20230404 |
| EPI_ISL_14881050 | NSP3 | hCoV-19/USA/ID-IBL-845683/2022 | R | 748 | E | 8 | 20220812 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | R | 748 | T | 16 | 20230401 |
| EPI_ISL_19499574 | NSP3 | hCoV-19/USA/TX-HMH-M-146229/2024 | T | 749 | L | 26 | 20240910 |
| EPI_ISL_7493998 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081421-992/2021 | T | 749 | G | 1 | 20210814 |
| EPI_ISL_18147067 | NSP3 | hCoV-19/Hong Kong/CUHK-NC10419/2022 | T | 749 | R | 2 | 20220131 |
| EPI_ISL_19828183 | NSP3 | hCoV-19/Australia/QLD0x0154DC/2025 | T | 749 | I | 14378 | 20250401 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | T | 749 | insCQstopHMDNSLVQLIW | 2 | 20220531 |
| EPI_ISL_19806244 | NSP3 | hCoV-19/Japan/FR023-0008/2025 | T | 749 | A | 6622 | 20250110 |
| EPI_ISL_19340398 | NSP3 | hCoV-19/Japan/FR025-0179/2024 | T | 749 | N | 149 | 20240419 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 749 | del | 37 | 20230404 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | T | 749 | insY | 1 | 20210717 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | T | 749 | F | 1 | 20220602 |
| EPI_ISL_17182120 | NSP3 | hCoV-19/USA/TX-HMH-M-126102/2023 | T | 749 | C | 26 | 20230221 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 749 | Q | 1 | 20220812 |
| EPI_ISL_5232347 | NSP3 | hCoV-19/USA/FL-CDC-ASC210121273/2021 | T | 749 | insRKVAGSESLC | 1 | 20210820 |
| EPI_ISL_16719326 | NSP3 | hCoV-19/Japan/TKYkbm79156/2022 | T | 749 | P | 5 | 20221227 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 749 | D | 7 | 20220210 |
| EPI_ISL_14795935 | NSP3 | hCoV-19/Sweden/03_SE600_500000037791SP/2022 | T | 749 | V | 15 | 20220113 |
| EPI_ISL_18594170 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-020505/2023 | T | 749 | S | 13 | 20231116 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 749 | K | 1 | 20221226 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | T | 749 | Y | 20 | 20221213 |
| EPI_ISL_19804725 | NSP3 | hCoV-19/USA/NY-NYULH-22412/2025 | I | 750 | T | 339 | 20250317 |
| EPI_ISL_19692674 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09781/2025 | I | 750 | F | 145 | 20250106 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | I | 750 | G | 1 | 20210805 |
| EPI_ISL_13176014 | NSP3 | hCoV-19/Turkey/HSGM-IST-01472/2022 | I | 750 | N | 6 | 20220525 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | I | 750 | Y | 5 | 20220124 |
| EPI_ISL_19710284 | NSP3 | hCoV-19/Netherlands/GE-RIVM-144950/2025 | I | 750 | V | 1053 | 20250106 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | I | 750 | E | 2 | 20210327 |
| EPI_ISL_19499574 | NSP3 | hCoV-19/USA/TX-HMH-M-146229/2024 | I | 750 | L | 79 | 20240910 |
| EPI_ISL_7493997 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081621-987/2021 | I | 750 | insstop | 3 | 20210816 |
| EPI_ISL_19696766 | NSP3 | hCoV-19/Turkey/HSGM-AA002452/2023 | I | 750 | M | 9 | 20231026 |
| EPI_ISL_18005516 | NSP3 | hCoV-19/Canada/BC-BCCDC-636857/2023 | I | 750 | J | 1 | 20230628 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | I | 750 | C | 5 | 20220721 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | I | 750 | stop | 22 | 20221213 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | I | 750 | D | 2 | 20220818 |
| EPI_ISL_13719438 | NSP3 | hCoV-19/USA/GA-GPHL-1723/2022 | I | 750 | K | 151 | 20220618 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | I | 750 | del | 30 | 20230217 |
| EPI_ISL_18920160 | NSP3 | hCoV-19/USA/NY-CDC-QDX92028215/2024 | I | 750 | S | 22 | 20240129 |
| EPI_ISL_10678719 | NSP3 | hCoV-19/Turkey/HSGM-G1541/2022 | K | 751 | S | 2 | 20220214 |
| EPI_ISL_19751637 | NSP3 | hCoV-19/Canada/BC-BCCDC-768077/2025 | K | 751 | R | 175 | 20250201 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | K | 751 | E | 7 | 20221003 |
| EPI_ISL_10757910 | NSP3 | hCoV-19/France/GES-HMN-22022230072/2022 | K | 751 | M | 2 | 20220214 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | K | 751 | insG | 1 | 20200803 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | K | 751 | H | 1 | 20220812 |
| EPI_ISL_17182120 | NSP3 | hCoV-19/USA/TX-HMH-M-126102/2023 | K | 751 | Q | 33 | 20230221 |
| EPI_ISL_8803744 | NSP3 | hCoV-19/India/MH-NCCS-56193/2021 | K | 751 | insVFTT | 1 | 20210808 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | K | 751 | P | 1 | 20210403 |
| EPI_ISL_18269036 | NSP3 | hCoV-19/USA/MS-MSPHL-0565/2023 | K | 751 | T | 6 | 20230816 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | K | 751 | insQA | 1 | 20211222 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | K | 751 | F | 1 | 20221226 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | K | 751 | del | 28 | 20230217 |
| EPI_ISL_19405367 | NSP3 | hCoV-19/Japan/FR028-0040/2024 | K | 751 | N | 149 | 20240829 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | K | 751 | Y | 2 | 20211011 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | K | 751 | insNEDYstopG | 1 | 20210114 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | K | 751 | I | 1 | 20210424 |
| EPI_ISL_999429 | NSP3 | hCoV-19/Wales/OXON-F60193/2021 | K | 751 | V | 1 | 20210109 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | K | 751 | D | 5 | 20230404 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 751 | L | 3 | 20210318 |
| EPI_ISL_12581342 | NSP3 | hCoV-19/Turkey/HSGM-GS2471/2022 | K | 751 | stop | 4 | 20220405 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | K | 751 | G | 23 | 20221213 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | K | 751 | insstopDYstop | 1 | 20220602 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | V | 752 | Y | 4 | 20220818 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | V | 752 | H | 6 | 20230401 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | V | 752 | D | 3 | 20221003 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | V | 752 | R | 2 | 20220124 |
| EPI_ISL_17182120 | NSP3 | hCoV-19/USA/TX-HMH-M-126102/2023 | V | 752 | Q | 26 | 20230221 |
| EPI_ISL_14881050 | NSP3 | hCoV-19/USA/ID-IBL-845683/2022 | V | 752 | C | 9 | 20220812 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | V | 752 | stop | 6 | 20220721 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | V | 752 | del | 27 | 20230217 |
| EPI_ISL_19716652 | NSP3 | hCoV-19/USA/DE-CDC-LC1129724/2025 | V | 752 | L | 781 | 20250121 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 752 | E | 5 | 20221226 |
| EPI_ISL_5589592 | NSP3 | hCoV-19/USA/NC-ECU-106502801/2021 | V | 752 | S | 2 | 20210202 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | V | 752 | K | 1 | 20210424 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 752 | N | 5 | 20230404 |
| EPI_ISL_16858286 | NSP3 | hCoV-19/Austria/AGES-1108755/2023 | V | 752 | G | 6 | 20230123 |
| EPI_ISL_19832218 | NSP3 | hCoV-19/USA/MI-UM-10062571307/2025 | V | 752 | M | 224 | 20250225 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | V | 752 | W | 1 | 20210526 |
| EPI_ISL_17784569 | NSP3 | hCoV-19/Spain/GA-CHUVI-35384468/2023 | V | 752 | I | 167 | 20230523 |
| EPI_ISL_14795935 | NSP3 | hCoV-19/Sweden/03_SE600_500000037791SP/2022 | V | 752 | T | 2 | 20220113 |
| EPI_ISL_951358 | NSP3 | hCoV-19/England/OXON-F53184/2021 | V | 752 | F | 1 | 20210115 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | V | 752 | insL | 1 | 20230217 |
| EPI_ISL_19209656 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-49806/2024 | V | 752 | A | 72 | 20240507 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | F | 753 | M | 5 | 20220531 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | F | 753 | W | 3 | 20210927 |
| EPI_ISL_17182120 | NSP3 | hCoV-19/USA/TX-HMH-M-126102/2023 | F | 753 | stop | 25 | 20230221 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | F | 753 | P | 1 | 20220509 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | F | 753 | H | 11 | 20230404 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | F | 753 | insstop | 1 | 20210802 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | F | 753 | I | 7 | 20221226 |
| EPI_ISL_7492735 | NSP3 | hCoV-19/USA/ID-IBL-774047/2021 | F | 753 | E | 2 | 20211201 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | F | 753 | G | 2 | 20210403 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | F | 753 | insQQstopT | 44 | 20220128 |
| EPI_ISL_8803744 | NSP3 | hCoV-19/India/MH-NCCS-56193/2021 | F | 753 | D | 1 | 20210808 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | F | 753 | T | 2 | 20210424 |
| EPI_ISL_19721763 | NSP3 | hCoV-19/USA/WI-WSLH-2500190/2024 | F | 753 | V | 23 | 20241230 |
| EPI_ISL_18888052 | NSP3 | hCoV-19/South Korea/KDCA284120/2024 | F | 753 | C | 252 | 20240117 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | F | 753 | del | 28 | 20230217 |
| EPI_ISL_16614965 | NSP3 | hCoV-19/England/PHEC-YY8H8Q7/2023 | F | 753 | S | 42 | 20230108 |
| EPI_ISL_951321 | NSP3 | hCoV-19/England/OXON-F52677/2021 | F | 753 | insFL | 1 | 20210104 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | F | 753 | N | 2 | 20220812 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | F | 753 | Y | 49 | 20230404 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | F | 753 | R | 1 | 20210805 |
| EPI_ISL_19677209 | NSP3 | hCoV-19/Wales/CLIMB-CM7YE89A/2025 | F | 753 | L | 783 | 20250106 |
| EPI_ISL_14795935 | NSP3 | hCoV-19/Sweden/03_SE600_500000037791SP/2022 | T | 754 | D | 1 | 20220113 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 754 | Y | 6 | 20230404 |
| EPI_ISL_19766685 | NSP3 | hCoV-19/USA/NM-NMDOH-2025004018/2025 | T | 754 | K | 84 | 20250126 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | T | 754 | N | 31 | 20221213 |
| EPI_ISL_10858422 | NSP3 | hCoV-19/Turkey/HSGM-G2221/2022 | T | 754 | P | 5 | 20220217 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | T | 754 | C | 1 | 20210802 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | T | 754 | F | 5 | 20230401 |
| EPI_ISL_15565612 | NSP3 | hCoV-19/USA/OK-OKPHL0006694/2021 | T | 754 | S | 5 | 20211023 |
| EPI_ISL_1178755 | NSP3 | hCoV-19/England/OXON-F688D2/2021 | T | 754 | H | 1 | 20210203 |
| EPI_ISL_18399015 | NSP3 | hCoV-19/Croatia/45695/2023 | T | 754 | R | 8 | 20230918 |
| EPI_ISL_7729085 | NSP3 | hCoV-19/Mexico/BCN_INER_IMSS_3295/2021 | T | 754 | V | 3 | 20211110 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 754 | G | 1 | 20221226 |
| EPI_ISL_14881050 | NSP3 | hCoV-19/USA/ID-IBL-845683/2022 | T | 754 | Q | 9 | 20220812 |
| EPI_ISL_19831356 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56855/2025 | T | 754 | I | 1869 | 20250310 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | T | 754 | stop | 3 | 20221003 |
| EPI_ISL_19501877 | NSP3 | hCoV-19/France/IDF-RELAB-IPP11666/2024 | T | 754 | A | 186 | 20241002 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | T | 754 | del | 29 | 20230217 |
| EPI_ISL_15514776 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-117335/2022 | T | 754 | L | 6 | 20221019 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 755 | D | 2 | 20210424 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | T | 755 | Y | 1 | 20210327 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 755 | K | 11 | 20230404 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 755 | N | 4 | 20220812 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | T | 755 | C | 3 | 20210927 |
| EPI_ISL_9476302 | NSP3 | hCoV-19/Brazil/SP-IB_149716/2022 | T | 755 | Q | 7 | 20220113 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | T | 755 | M | 1 | 20210319 |
| EPI_ISL_14785729 | NSP3 | hCoV-19/Singapore/10884/2022 | T | 755 | A | 5 | 20220827 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | T | 755 | F | 1 | 20230217 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | T | 755 | stop | 1 | 20210805 |
| EPI_ISL_14881050 | NSP3 | hCoV-19/USA/ID-IBL-845683/2022 | T | 755 | R | 6 | 20220812 |
| EPI_ISL_5589592 | NSP3 | hCoV-19/USA/NC-ECU-106502801/2021 | T | 755 | E | 1 | 20210202 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | T | 755 | V | 1 | 20210403 |
| EPI_ISL_11522620 | NSP3 | hCoV-19/Gabon/K0623/2020 | T | 755 | P | 1 | 20200413 |
| EPI_ISL_17360317 | NSP3 | hCoV-19/Iceland/L-3941/2023 | T | 755 | S | 42 | 20230323 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | T | 755 | H | 1 | 20220623 |
| EPI_ISL_19484200 | NSP3 | hCoV-19/Scotland/EDB60235/2022 | T | 755 | I | 14 | 20220424 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | T | 755 | del | 39 | 20230404 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | T | 755 | G | 3 | 20221003 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | T | 755 | L | 56 | 20230401 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | V | 756 | stop | 11 | 20230401 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | V | 756 | P | 1 | 20210805 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | V | 756 | G | 4 | 20230925 |
| EPI_ISL_18025834 | NSP3 | hCoV-19/Russia/MOW-CSP-LQ-11499_S19/2021 | V | 756 | insS | 1 | 20210917 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | V | 756 | insSVSSP | 1 | 20220509 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | V | 756 | M | 3 | 20220721 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 756 | S | 1 | 20210318 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | V | 756 | F | 2 | 20211019 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | V | 756 | W | 1 | 20210803 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 756 | K | 10 | 20230404 |
| EPI_ISL_17275343 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45869/2023 | V | 756 | T | 50 | 20230217 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | V | 756 | C | 1 | 20220628 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | V | 756 | Y | 2 | 20230217 |
| EPI_ISL_19493608 | NSP3 | hCoV-19/Japan/FR085-0018/2024 | V | 756 | L | 51 | 20241001 |
| EPI_ISL_18738760 | NSP3 | hCoV-19/USA/CO-CDPHE-41578790/2023 | V | 756 | I | 116 | 20231201 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | V | 756 | R | 29 | 20221213 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 756 | Q | 3 | 20221226 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 756 | D | 3 | 20220812 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | V | 756 | del | 39 | 20230404 |
| EPI_ISL_19719074 | NSP3 | hCoV-19/env/Germany/BY-LGL-6469124/2025 | V | 756 | A | 19 | 20250113 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | D | 757 | W | 1 | 20210121 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | D | 757 | H | 43 | 20230217 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | D | 757 | P | 10 | 20220623 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | D | 757 | K | 6 | 20230217 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | D | 757 | S | 49 | 20220818 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | D | 757 | V | 10 | 20220812 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | D | 757 | Y | 9 | 20221003 |
| EPI_ISL_17275343 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45869/2023 | D | 757 | R | 5 | 20230217 |
| EPI_ISL_17713575 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000270187SP/2022 | D | 757 | B | 2 | 20221013 |
| EPI_ISL_18526775 | NSP3 | hCoV-19/Canada/BC-BCCDC-668511/2023 | D | 757 | E | 69 | 20231031 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | D | 757 | insI | 1 | 20210327 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | D | 757 | stop | 7 | 20220531 |
| EPI_ISL_12319908 | NSP3 | hCoV-19/Turkey/HSGM-GS1604/2022 | D | 757 | L | 2 | 20220401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | D | 757 | T | 24 | 20221226 |
| EPI_ISL_14795955 | NSP3 | hCoV-19/Sweden/03_SE600_500000073836SP/2022 | D | 757 | insNI | 2 | 20220113 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | D | 757 | del | 34 | 20230404 |
| EPI_ISL_13983109 | NSP3 | hCoV-19/Mexico/GUA_CIAD-IMSS_202201023489/2022 | D | 757 | G | 6 | 20220627 |
| EPI_ISL_3590620 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ12968/2021 | D | 757 | A | 3 | 20210617 |
| EPI_ISL_12635572 | NSP3 | hCoV-19/Finland/THL-202212316/2022 | D | 757 | N | 4 | 20220408 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | D | 757 | Q | 23 | 20221213 |
| EPI_ISL_19731410 | NSP3 | hCoV-19/Japan/FR064-0004/2025 | N | 758 | H | 146 | 20250127 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | N | 758 | stop | 1 | 20210717 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | N | 758 | T | 108 | 20220812 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | N | 758 | del | 38 | 20230404 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | N | 758 | R | 1 | 20211109 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | N | 758 | G | 1 | 20210403 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | N | 758 | M | 1 | 20220628 |
| EPI_ISL_999429 | NSP3 | hCoV-19/Wales/OXON-F60193/2021 | N | 758 | insC | 1 | 20210109 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 758 | E | 1 | 20210318 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | N | 758 | V | 1 | 20210319 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | N | 758 | L | 1 | 20230217 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | N | 758 | D | 12 | 20230217 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | N | 758 | K | 11 | 20230401 |
| EPI_ISL_18361896 | NSP3 | hCoV-19/Singapore/R71MR44/2023 | N | 758 | B | 4 | 20230929 |
| EPI_ISL_19647392 | NSP3 | hCoV-19/Canada/ON-PHL-202426790/2024 | N | 758 | Y | 669 | 20241227 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | N | 758 | C | 1 | 20220628 |
| EPI_ISL_19377743 | NSP3 | hCoV-19/Australia/NSW-ICPMR-54835/2024 | N | 758 | S | 255 | 20240806 |
| EPI_ISL_11887823 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0797/2022 | N | 758 | Q | 3 | 20220117 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | N | 758 | insstopGL | 3 | 20211031 |
| EPI_ISL_8807024 | NSP3 | hCoV-19/India/GA-NCCS-3055100255359/2021 | N | 758 | I | 7 | 20211004 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | N | 758 | A | 3 | 20220509 |
| EPI_ISL_19828638 | NSP3 | hCoV-19/Japan/FR055-0164/2025 | N | 758 | P | 45 | 20250310 |
| EPI_ISL_8194883 | NSP3 | hCoV-19/Egypt/NRC-6353/2020 | I | 759 | insstop | 2 | 20200726 |
| EPI_ISL_19772274 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10630/2025 | I | 759 | T | 472 | 20250129 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | I | 759 | W | 1 | 20210717 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 759 | E | 1 | 20220210 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | I | 759 | del | 36 | 20230404 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | I | 759 | Q | 4 | 20221226 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | I | 759 | C | 1 | 20210121 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | I | 759 | R | 46 | 20220128 |
| EPI_ISL_8807024 | NSP3 | hCoV-19/India/GA-NCCS-3055100255359/2021 | I | 759 | insPHSTstopMstop | 1 | 20211004 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | I | 759 | stop | 25 | 20230401 |
| EPI_ISL_19731410 | NSP3 | hCoV-19/Japan/FR064-0004/2025 | I | 759 | L | 167 | 20250127 |
| EPI_ISL_12934369 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1589/2022 | I | 759 | insR | 4 | 20220119 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | I | 759 | H | 5 | 20230217 |
| EPI_ISL_1051793 | NSP3 | hCoV-19/England/OXON-F64663/2021 | I | 759 | insHNstopVstop | 1 | 20210112 |
| EPI_ISL_18435700 | NSP3 | hCoV-19/South Korea/KDCA269233/2023 | I | 759 | F | 14 | 20230925 |
| EPI_ISL_19363867 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14047/2024 | I | 759 | M | 21 | 20240401 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | I | 759 | P | 2 | 20220623 |
| EPI_ISL_19828638 | NSP3 | hCoV-19/Japan/FR055-0164/2025 | I | 759 | J | 1563 | 20250310 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | I | 759 | K | 3 | 20220723 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | I | 759 | Y | 1 | 20220427 |
| EPI_ISL_17649997 | NSP3 | hCoV-19/Japan/KSH077/2022 | I | 759 | insXXXXXXXXXXXXXXXXXXX | 1 | 20221015 |
| EPI_ISL_19611145 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000623201/2024 | I | 759 | V | 424 | 20241118 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | I | 759 | S | 108 | 20230404 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | I | 759 | A | 1 | 20210805 |
| EPI_ISL_14392385 | NSP3 | hCoV-19/Finland/VI-7705/2022 | I | 759 | N | 3 | 20220714 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | I | 759 | G | 1 | 20210327 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | N | 760 | H | 11 | 20230925 |
| EPI_ISL_10992199 | NSP3 | hCoV-19/India/MH-RFIP09552/2022 | N | 760 | E | 1 | 20220110 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | N | 760 | Y | 9 | 20230404 |
| EPI_ISL_17500164 | NSP3 | hCoV-19/Chile/RM-28898/2023 | N | 760 | del | 36 | 20230404 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | N | 760 | F | 2 | 20220812 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | N | 760 | W | 1 | 20211019 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | N | 760 | P | 31 | 20221213 |
| EPI_ISL_18436179 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200500778N2/2022 | N | 760 | D | 5 | 20221205 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | N | 760 | insSTRK | 1 | 20220222 |
| EPI_ISL_15229496 | NSP3 | hCoV-19/Singapore/12313/2022 | N | 760 | K | 58 | 20220919 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | N | 760 | L | 4 | 20220721 |
| EPI_ISL_18455254 | NSP3 | hCoV-19/env/Ukraine/80640/2023 | N | 760 | S | 29 | 20230918 |
| EPI_ISL_14436249 | NSP3 | hCoV-19/USA/TX-HMH-110553/2022 | N | 760 | I | 6 | 20220801 |
| EPI_ISL_13620886 | NSP3 | hCoV-19/Turkey/HSGM-IST-02638/2022 | N | 760 | T | 12 | 20220622 |
| EPI_ISL_18861281 | NSP3 | hCoV-19/Wales/CLIMB-CM7Y8YJ8/2024 | N | 760 | B | 6 | 20240122 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | N | 760 | insK | 4 | 20221130 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 760 | A | 2 | 20220210 |
| EPI_ISL_10992199 | NSP3 | hCoV-19/India/MH-RFIP09552/2022 | N | 760 | insEAARYM | 1 | 20220110 |
| EPI_ISL_2352084 | NSP3 | hCoV-19/France/OCC-CHU-TLS-210741445401/2021 | N | 760 | insPVSYTHLRAHETIGstop | 1 | 20210309 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | N | 760 | G | 4 | 20230401 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | N | 760 | R | 12 | 20221130 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | N | 760 | insstopI | 1 | 20220818 |
| EPI_ISL_3588754 | NSP3 | hCoV-19/USA/ID-IBL-746258/2021 | N | 760 | Q | 2 | 20210801 |
| EPI_ISL_13429938 | NSP3 | hCoV-19/USA/NC-CLT-008938/2022 | L | 761 | insQ | 1 | 20220601 |
| EPI_ISL_14392783 | NSP3 | hCoV-19/India/MH-NCCS-2749002179272/2021 | L | 761 | insLRCLQQstopTTstopPP | 1 | 20211109 |
| EPI_ISL_18788458 | NSP3 | hCoV-19/Sweden/O-14_SE300_DC24-000050/2024 | L | 761 | J | 28 | 20240112 |
| EPI_ISL_19208113 | NSP3 | hCoV-19/Canada/BC-BCCDC-715547/2024 | L | 761 | H | 120 | 20240602 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | L | 761 | del | 42 | 20231218 |
| EPI_ISL_3421844 | NSP3 | hCoV-19/England/OXON-FA8B19/2020 | L | 761 | insLI | 1 | 20201222 |
| EPI_ISL_16376181 | NSP3 | hCoV-19/South Africa/NICD-N50572/2022 | L | 761 | V | 23 | 20221101 |
| EPI_ISL_18680281 | NSP3 | hCoV-19/Denmark/DCGC-666666/2023 | L | 761 | R | 15 | 20231211 |
| EPI_ISL_18870085 | NSP3 | hCoV-19/Japan/PG-592652/2024 | L | 761 | P | 39 | 20240119 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | L | 761 | Y | 3 | 20220723 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | L | 761 | C | 4 | 20220623 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | L | 761 | insCCG | 1 | 20210812 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 761 | A | 2 | 20220509 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | L | 761 | insG | 1 | 20220623 |
| EPI_ISL_19615586 | NSP3 | hCoV-19/USA/NY-PRL-241210_81D07/2024 | L | 761 | F | 809 | 20241130 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | L | 761 | insP | 2 | 20210809 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | L | 761 | insKWADN | 10 | 20220620 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 761 | K | 1 | 20210318 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 761 | S | 13 | 20230217 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | L | 761 | Q | 3 | 20221003 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | L | 761 | stop | 4 | 20211109 |
| EPI_ISL_19699476 | NSP3 | hCoV-19/USA/CA-PFZ03381/2025 | L | 761 | I | 374 | 20250103 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 761 | T | 8 | 20220210 |
| EPI_ISL_5460212 | NSP3 | hCoV-19/Pakistan/UOL-IMBB-KKU-22/2021 | H | 762 | V | 1 | 20211019 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | H | 762 | insstopPP | 1 | 20221003 |
| EPI_ISL_19758039 | NSP3 | hCoV-19/New Zealand/25YA0505/2025 | H | 762 | Y | 240 | 20250210 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | H | 762 | L | 9 | 20230401 |
| EPI_ISL_18724105 | NSP3 | hCoV-19/Denmark/DCGC-668480/2023 | H | 762 | Q | 8 | 20231218 |
| EPI_ISL_8803757 | NSP3 | hCoV-19/India/MH-NCCS-56265/2021 | H | 762 | insstopPPHASC | 4 | 20210809 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | H | 762 | del | 45 | 20231218 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | H | 762 | D | 2 | 20220927 |
| EPI_ISL_12753118 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726728613/2022 | H | 762 | P | 3 | 20220204 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | H | 762 | M | 1 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 762 | A | 1 | 20220210 |
| EPI_ISL_5589592 | NSP3 | hCoV-19/USA/NC-ECU-106502801/2021 | H | 762 | F | 2 | 20210202 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | H | 762 | S | 8 | 20220723 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | H | 762 | E | 1 | 20210403 |
| EPI_ISL_15229496 | NSP3 | hCoV-19/Singapore/12313/2022 | H | 762 | K | 3 | 20220919 |
| EPI_ISL_19507697 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293263/2024 | H | 762 | R | 92 | 20241011 |
| EPI_ISL_8138199 | NSP3 | hCoV-19/India/MH-RFIP05285/2021 | H | 762 | insKLDGVVC | 1 | 20211121 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | H | 762 | insPDSA | 1 | 20210327 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | H | 762 | C | 4 | 20221122 |
| EPI_ISL_8807024 | NSP3 | hCoV-19/India/GA-NCCS-3055100255359/2021 | H | 762 | insLstopQSstopD | 1 | 20211004 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | H | 762 | T | 8 | 20230404 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | H | 762 | W | 57 | 20221130 |
| EPI_ISL_18789986 | NSP3 | hCoV-19/Austria/AGES-1100281/2024 | H | 762 | N | 14 | 20240111 |
| EPI_ISL_19212777 | NSP3 | hCoV-19/env/India/MH-NCL-242-29/2024 | T | 763 | S | 44 | 20240129 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | T | 763 | C | 11 | 20220620 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 763 | E | 10 | 20230404 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | T | 763 | Q | 5 | 20220818 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | T | 763 | insCCG | 1 | 20210812 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | T | 763 | del | 41 | 20231218 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | T | 763 | N | 2 | 20220509 |
| EPI_ISL_19772145 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10701/2025 | T | 763 | M | 3100 | 20250214 |
| EPI_ISL_8803747 | NSP3 | hCoV-19/India/GA-NCCS-C59074/2021 | T | 763 | insG | 1 | 20210720 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | T | 763 | D | 1 | 20230507 |
| EPI_ISL_14584694 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16379/2022 | T | 763 | P | 5 | 20220725 |
| EPI_ISL_19253924 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJYBN/2024 | T | 763 | A | 854 | 20240527 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | T | 763 | V | 10 | 20220623 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | T | 763 | G | 9 | 20221122 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 763 | I | 6 | 20220812 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | T | 763 | insSCG | 12 | 20221213 |
| EPI_ISL_18037013 | NSP3 | hCoV-19/Guangdong/GDCDC_ZHHG_0159/2023 | T | 763 | R | 10 | 20230524 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | T | 763 | insstop | 1 | 20210717 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | T | 763 | insTHASCG | 1 | 20211109 |
| EPI_ISL_19447674 | NSP3 | hCoV-19/Wales/CLIMB-CM7YJGUN/2024 | T | 763 | K | 131 | 20240916 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | T | 763 | L | 3 | 20210717 |
| EPI_ISL_19767234 | NSP3 | hCoV-19/Norway/3106/2025 | Q | 764 | R | 589 | 20250220 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | Q | 764 | Y | 18 | 20220620 |
| EPI_ISL_19527670 | NSP3 | hCoV-19/USA/TN-SPHL-4416/2024 | Q | 764 | K | 208 | 20240819 |
| EPI_ISL_10992199 | NSP3 | hCoV-19/India/MH-RFIP09552/2022 | Q | 764 | A | 1 | 20220110 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | Q | 764 | C | 55 | 20230401 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | Q | 764 | del | 40 | 20231218 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Q | 764 | G | 3 | 20220509 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | Q | 764 | T | 3 | 20220812 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | Q | 764 | S | 21 | 20240327 |
| EPI_ISL_3521302 | NSP3 | hCoV-19/USA/CA-CDC-FG-065037/2021 | Q | 764 | Z | 1 | 20210806 |
| EPI_ISL_19760195 | NSP3 | hCoV-19/USA/NY-CDC-LC1132799/2025 | Q | 764 | L | 274 | 20250213 |
| EPI_ISL_19323803 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-19G-MM00043R/2024 | Q | 764 | P | 8 | 20240719 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | Q | 764 | insSCGH | 1 | 20210809 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | Q | 764 | insCGH | 11 | 20240327 |
| EPI_ISL_14456667 | NSP3 | hCoV-19/Turkey/HSGM-IST-03584/2022 | Q | 764 | N | 2 | 20220702 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | Q | 764 | I | 1 | 20210319 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Q | 764 | W | 1 | 20221226 |
| EPI_ISL_17600986 | NSP3 | hCoV-19/Slovenia/12854/2023 | Q | 764 | stop | 29 | 20230412 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | Q | 764 | M | 1 | 20220427 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | Q | 764 | F | 1 | 20210424 |
| EPI_ISL_14440996 | NSP3 | hCoV-19/India/TN-ICMR-NIRT-INSACOG-W88/2022 | Q | 764 | V | 5 | 20220201 |
| EPI_ISL_19786827 | NSP3 | hCoV-19/USA/CA-CDPH-6000021630/2025 | Q | 764 | H | 2832 | 20250203 |
| EPI_ISL_19822352 | NSP3 | hCoV-19/New Zealand/25YA0808/2025 | Q | 764 | E | 24 | 20250324 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | V | 765 | insGH | 1 | 20200803 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | V | 765 | Q | 57 | 20221130 |
| EPI_ISL_12999244 | NSP3 | hCoV-19/Russia/LIP-CRIE-7730693573/2022 | V | 765 | D | 2 | 20220215 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | V | 765 | del | 41 | 20231218 |
| EPI_ISL_19297727 | NSP3 | hCoV-19/Russia/KGD-RII-MH193811S/2024 | V | 765 | A | 312 | 20240523 |
| EPI_ISL_10045282 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-345006/2022 | V | 765 | S | 15 | 20220208 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 765 | T | 2 | 20220210 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | V | 765 | M | 4 | 20210823 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | V | 765 | insWTCQstopH | 5 | 20221226 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 765 | P | 5 | 20230404 |
| EPI_ISL_19828192 | NSP3 | hCoV-19/Australia/QLD0x0154E7/2025 | V | 765 | F | 3265 | 20250326 |
| EPI_ISL_19764054 | NSP3 | hCoV-19/South Africa/NICD-R01357/2025 | V | 765 | I | 1005 | 20250207 |
| EPI_ISL_19695237 | NSP3 | hCoV-19/Japan/FR035-0509/2024 | V | 765 | G | 41 | 20241224 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | V | 765 | N | 1 | 20210319 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | V | 765 | C | 7 | 20221201 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | V | 765 | stop | 5 | 20211031 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | V | 765 | Y | 1 | 20220509 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 765 | R | 1 | 20220812 |
| EPI_ISL_12934304 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1524/2022 | V | 765 | K | 5 | 20220107 |
| EPI_ISL_19242150 | NSP3 | hCoV-19/Yunnan/YNCDC-0796/2024 | V | 765 | L | 98 | 20240409 |
| EPI_ISL_10996887 | NSP3 | hCoV-19/India/MH-RFIP09297/2022 | V | 766 | insRTstopTTTstopPPHASC | 2 | 20220122 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | V | 766 | S | 2 | 20210327 |
| EPI_ISL_11799944 | NSP3 | hCoV-19/USA/ID-IBL-808457/2022 | V | 766 | W | 6 | 20220323 |
| EPI_ISL_19477888 | NSP3 | hCoV-19/Guatemala/1152-DLNS/2024 | V | 766 | L | 179 | 20240830 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | V | 766 | T | 3 | 20211031 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | V | 766 | Q | 2 | 20210520 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | V | 766 | N | 35 | 20240327 |
| EPI_ISL_19764072 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56432/2025 | V | 766 | A | 276 | 20250212 |
| EPI_ISL_19367383 | NSP3 | hCoV-19/USA/TN-UM-L7439792135583/2024 | V | 766 | G | 18 | 20240718 |
| EPI_ISL_17708766 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000269757SP/2022 | V | 766 | insXX | 4 | 20220331 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 766 | I | 17 | 20230404 |
| EPI_ISL_17695318 | NSP3 | hCoV-19/Peru/PIU-INS-44383/2023 | V | 766 | F | 6 | 20230330 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | V | 766 | C | 1 | 20210805 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | V | 766 | stop | 56 | 20221130 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | V | 766 | K | 3 | 20220531 |
| EPI_ISL_19708020 | NSP3 | hCoV-19/USA/DE-DHSS-1017/2025 | V | 766 | M | 2433 | 20250119 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | V | 766 | del | 36 | 20231218 |
| EPI_ISL_7454444 | NSP3 | hCoV-19/Sweden/UUH-500000046847SP/2021 | V | 766 | insXXXX | 1 | 20211125 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | V | 766 | D | 2 | 20210319 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | V | 766 | H | 1 | 20210812 |
| EPI_ISL_5333906 | NSP3 | hCoV-19/Sweden/UUH-000200068787/2021 | V | 766 | insXXXXX | 1 | 20210610 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | D | 767 | insstop | 1 | 20230401 |
| EPI_ISL_18975757 | NSP3 | hCoV-19/USA/UT-UPHL-240207372360/2024 | D | 767 | A | 45 | 20240111 |
| EPI_ISL_17624596 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200357834N2/2022 | D | 767 | insXXX | 1 | 20220210 |
| EPI_ISL_17650005 | NSP3 | hCoV-19/Japan/KSH088/2022 | D | 767 | insXXXXXXXXXXXXXXXXXXXXXXXXXX | 3 | 20221021 |
| EPI_ISL_2555876 | NSP3 | hCoV-19/India/UK-NCDC-2609272/2021 | D | 767 | insGX | 1 | 20210417 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | D | 767 | M | 1 | 20210812 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | D | 767 | T | 19 | 20220620 |
| EPI_ISL_19275629 | NSP3 | hCoV-19/New Zealand/24YA4662/2024 | D | 767 | H | 72 | 20240608 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | D | 767 | K | 5 | 20210823 |
| EPI_ISL_19130964 | NSP3 | hCoV-19/Taiwan/CDC-W37643/2024 | D | 767 | G | 116 | 20240508 |
| EPI_ISL_7492735 | NSP3 | hCoV-19/USA/ID-IBL-774047/2021 | D | 767 | I | 1 | 20211201 |
| EPI_ISL_19354054 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004430914/2024 | D | 767 | B | 24 | 20240622 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 767 | S | 1 | 20210318 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | D | 767 | W | 9 | 20220721 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | D | 767 | Q | 1 | 20230401 |
| EPI_ISL_19427105 | NSP3 | hCoV-19/USA/NY-Wadsworth-24056447-01/2024 | D | 767 | E | 68 | 20240830 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 767 | L | 1 | 20220210 |
| EPI_ISL_3028097 | NSP3 | hCoV-19/Spain/CM-ISCIII-212901/2021 | D | 767 | stop | 1 | 20210325 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | D | 767 | del | 41 | 20231218 |
| EPI_ISL_19793651 | NSP3 | hCoV-19/USA/MN-MDH-46563/2025 | D | 767 | Y | 377 | 20250214 |
| EPI_ISL_13113222 | NSP3 | hCoV-19/Turkey/HSGM-IST-01767/2022 | D | 767 | R | 7 | 20220525 |
| EPI_ISL_19824760 | NSP3 | hCoV-19/France/OCC-HCL025053378301/2025 | D | 767 | N | 939 | 20250325 |
| EPI_ISL_12679952 | NSP3 | hCoV-19/Mauritius/CERI-KRISP-K041396/2022 | D | 767 | V | 13 | 20220328 |
| EPI_ISL_18358808 | NSP3 | hCoV-19/USA/MI-CDC-QDX85475011/2023 | M | 768 | R | 53 | 20230922 |
| EPI_ISL_18983069 | NSP3 | hCoV-19/Chongqing/YBCDC-S6733/2024 | M | 768 | del | 37 | 20240304 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | M | 768 | F | 2 | 20220531 |
| EPI_ISL_11799944 | NSP3 | hCoV-19/USA/ID-IBL-808457/2022 | M | 768 | C | 5 | 20220323 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | M | 768 | H | 1 | 20210805 |
| EPI_ISL_1309771 | NSP3 | hCoV-19/England/OXON-F766AA/2021 | M | 768 | W | 2 | 20210215 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | M | 768 | E | 1 | 20220723 |
| EPI_ISL_16916316 | NSP3 | hCoV-19/USA/NJ-CDC-LC1003693/2023 | M | 768 | K | 35 | 20230130 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | M | 768 | insVP | 5 | 20230404 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | M | 768 | Q | 1 | 20210403 |
| EPI_ISL_19785627 | NSP3 | hCoV-19/Brazil/DF-LACENDF-530151798/2025 | M | 768 | I | 10627 | 20250213 |
| EPI_ISL_19681270 | NSP3 | hCoV-19/Germany/BE-RKI-I-1147139/2025 | M | 768 | T | 249 | 20250102 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | M | 768 | A | 10 | 20220620 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | M | 768 | S | 2 | 20220509 |
| EPI_ISL_19617174 | NSP3 | hCoV-19/USA/WI-WSLH-2401880/2024 | M | 768 | L | 221 | 20240801 |
| EPI_ISL_19817476 | NSP3 | hCoV-19/Italy/LOM_ASSTCREMONA_CRV-7048762/2025 | M | 768 | V | 764 | 20250314 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | M | 768 | N | 8 | 20221226 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | M | 768 | D | 1 | 20210812 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | M | 768 | Y | 3 | 20211011 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | S | 769 | D | 58 | 20221130 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | S | 769 | N | 16 | 20230404 |
| EPI_ISL_18097820 | NSP3 | hCoV-19/Japan/PG-552339/2023 | S | 769 | A | 137 | 20230617 |
| EPI_ISL_5441243 | NSP3 | hCoV-19/USA/ID-IBL-758886/2021 | S | 769 | insA | 1 | 20210918 |
| EPI_ISL_12934304 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1524/2022 | S | 769 | C | 5 | 20220107 |
| EPI_ISL_11799944 | NSP3 | hCoV-19/USA/ID-IBL-808457/2022 | S | 769 | Q | 5 | 20220323 |
| EPI_ISL_11415690 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC56LAMS/2022 | S | 769 | F | 1 | 20220131 |
| EPI_ISL_19070429 | NSP3 | hCoV-19/env/Germany/BY-LGL-6194253/2024 | S | 769 | P | 86 | 20240403 |
| EPI_ISL_12146121 | NSP3 | hCoV-19/Turkey/HSGM-GS1849/2022 | S | 769 | V | 2 | 20220401 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | S | 769 | insP | 4 | 20210823 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | S | 769 | W | 35 | 20240327 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | S | 769 | K | 3 | 20220723 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | S | 769 | insEP | 1 | 20210813 |
| EPI_ISL_18983069 | NSP3 | hCoV-19/Chongqing/YBCDC-S6733/2024 | S | 769 | del | 36 | 20240304 |
| EPI_ISL_19348686 | NSP3 | hCoV-19/Morocco/12/2020 | S | 769 | M | 1 | 20201107 |
| EPI_ISL_19650671 | NSP3 | hCoV-19/Sweden/BD-M10006398/2024 | S | 769 | stop | 16 | 20241213 |
| EPI_ISL_9629726 | NSP3 | hCoV-19/USA/CA-CDC-ASC210541452/2022 | S | 769 | Y | 3 | 20220120 |
| EPI_ISL_19823362 | NSP3 | hCoV-19/USA/NY-SUNYQB-X1147385/2025 | S | 769 | L | 11524 | 20250329 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | S | 769 | E | 7 | 20220721 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | S | 769 | T | 26 | 20230401 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | M | 770 | A | 1 | 20200729 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | M | 770 | E | 4 | 20220818 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | M | 770 | S | 7 | 20220927 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | M | 770 | Y | 2 | 20220823 |
| EPI_ISL_19741455 | NSP3 | hCoV-19/USA/CA-PFZ04199/2025 | M | 770 | K | 538 | 20250130 |
| EPI_ISL_19643777 | NSP3 | hCoV-19/USA/IA-SHL-2545881/2024 | M | 770 | L | 240 | 20241216 |
| EPI_ISL_18314923 | NSP3 | hCoV-19/Greece/NPHO-8158/2023 | M | 770 | R | 46 | 20230904 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | M | 770 | stop | 3 | 20210812 |
| EPI_ISL_18983069 | NSP3 | hCoV-19/Chongqing/YBCDC-S6733/2024 | M | 770 | del | 41 | 20240304 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | M | 770 | F | 2 | 20210717 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | M | 770 | D | 3 | 20221201 |
| EPI_ISL_5589592 | NSP3 | hCoV-19/USA/NC-ECU-106502801/2021 | M | 770 | insHTXXX | 1 | 20210202 |
| EPI_ISL_7778286 | NSP3 | hCoV-19/USA/ID-IBL-757603/2021 | M | 770 | insstop | 1 | 20210913 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | M | 770 | insD | 1 | 20200729 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | M | 770 | N | 58 | 20221130 |
| EPI_ISL_19831971 | NSP3 | hCoV-19/Wales/CLIMB-CM7YF8JB/2025 | M | 770 | T | 792 | 20250331 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | M | 770 | Q | 11 | 20230404 |
| EPI_ISL_19697911 | NSP3 | hCoV-19/Singapore/Y25R4MSC47/2025 | M | 770 | I | 1158 | 20250120 |
| EPI_ISL_19805249 | NSP3 | hCoV-19/Russia/SPE-RII-MH229768S/2025 | M | 770 | V | 328 | 20250318 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | M | 770 | H | 1 | 20211011 |
| EPI_ISL_17657092 | NSP3 | hCoV-19/Australia/VIC83795/2023 | T | 771 | S | 72 | 20230501 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | T | 771 | E | 1 | 20220723 |
| EPI_ISL_17956376 | NSP3 | hCoV-19/USA/UT-UPHL-221219957547/2022 | T | 771 | R | 2 | 20221121 |
| EPI_ISL_18983069 | NSP3 | hCoV-19/Chongqing/YBCDC-S6733/2024 | T | 771 | del | 36 | 20240304 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | T | 771 | insNL | 1 | 20210403 |
| EPI_ISL_12934304 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1524/2022 | T | 771 | stop | 3 | 20220107 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 771 | L | 1 | 20220812 |
| EPI_ISL_10951240 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9192/2022 | T | 771 | C | 1 | 20220210 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | T | 771 | V | 11 | 20221226 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | T | 771 | insV | 30 | 20240327 |
| EPI_ISL_9702267 | NSP3 | hCoV-19/India/MH-RFIP05973/2021 | T | 771 | insTstopPPHASCEDLXXXXX | 1 | 20211117 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 771 | Y | 1 | 20210318 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | T | 771 | N | 2 | 20220427 |
| EPI_ISL_19828186 | NSP3 | hCoV-19/Australia/QLD0x0154E1/2025 | T | 771 | A | 456 | 20250401 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | T | 771 | F | 3 | 20220531 |
| EPI_ISL_19822329 | NSP3 | hCoV-19/New Zealand/25YA0772/2025 | T | 771 | I | 8397 | 20250321 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 771 | D | 5 | 20230104 |
| EPI_ISL_19044638 | NSP3 | hCoV-19/Italy/PIE_IRCC_15898895/2024 | T | 771 | P | 123 | 20240326 |
| EPI_ISL_9697777 | NSP3 | hCoV-19/India/MH-RFIP08640/2021 | T | 771 | insTstopPPHASCXXXXX | 1 | 20211226 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | T | 771 | M | 6 | 20220721 |
| EPI_ISL_18946951 | NSP3 | hCoV-19/USA/NM-NMDOH-001689/2023 | T | 771 | K | 46 | 20231225 |
| EPI_ISL_3922800 | NSP3 | hCoV-19/USA/ID-IBL-636268/2020 | Y | 772 | insTTVstop | 1 | 20200729 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | Y | 772 | Q | 4 | 20220105 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | Y | 772 | M | 2 | 20210520 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | Y | 772 | K | 2 | 20220927 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | Y | 772 | R | 2 | 20211031 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | Y | 772 | W | 45 | 20240327 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | Y | 772 | L | 71 | 20221130 |
| EPI_ISL_12955365 | NSP3 | hCoV-19/Russia/CU-CRIE-7730687698/2022 | Y | 772 | D | 3 | 20220214 |
| EPI_ISL_17809179 | NSP3 | hCoV-19/Italy/LOM_Unimi-2332/2023 | Y | 772 | F | 35 | 20230607 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | Y | 772 | S | 3 | 20230507 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Y | 772 | del | 44 | 20240904 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | Y | 772 | I | 9 | 20220723 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | Y | 772 | V | 2 | 20221213 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Y | 772 | T | 2 | 20220509 |
| EPI_ISL_18384697 | NSP3 | hCoV-19/Japan/PG-572792/2023 | Y | 772 | H | 15 | 20230831 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | Y | 772 | insstopGVYN | 2 | 20220209 |
| EPI_ISL_1051793 | NSP3 | hCoV-19/England/OXON-F64663/2021 | Y | 772 | insVI | 1 | 20210112 |
| EPI_ISL_9857005 | NSP3 | hCoV-19/Finland/THL-202205161/2022 | Y | 772 | N | 1 | 20220118 |
| EPI_ISL_13112797 | NSP3 | hCoV-19/Turkey/HSGM-IST-00199/2022 | Y | 772 | stop | 2 | 20220424 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 772 | A | 1 | 20210318 |
| EPI_ISL_19762091 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147838/2025 | Y | 772 | C | 118 | 20250213 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | Y | 772 | P | 1 | 20210917 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | G | 773 | P | 8 | 20230404 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | G | 773 | K | 4 | 20220723 |
| EPI_ISL_18423697 | NSP3 | hCoV-19/USA/TX-HMH-134910/2023 | G | 773 | stop | 7 | 20231013 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | G | 773 | S | 36 | 20240327 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | G | 773 | del | 50 | 20240904 |
| EPI_ISL_8803751 | NSP3 | hCoV-19/India/MH-NCCS-2750000384250/2021 | G | 773 | M | 1 | 20210714 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | G | 773 | T | 8 | 20230401 |
| EPI_ISL_19618581 | NSP3 | hCoV-19/Germany/BY-LGL-6418145/2024 | G | 773 | E | 1216 | 20241118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 773 | N | 1 | 20220210 |
| EPI_ISL_8812961 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-103021-1225/2021 | G | 773 | I | 1 | 20211030 |
| EPI_ISL_19812003 | NSP3 | hCoV-19/Australia/QLD0x01543A/2025 | G | 773 | R | 1139 | 20250318 |
| EPI_ISL_17226409 | NSP3 | hCoV-19/Mexico/ZAC-InDRE-FB1352/2023 | G | 773 | D | 28 | 20230203 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | G | 773 | W | 6 | 20221213 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | G | 773 | Q | 10 | 20220620 |
| EPI_ISL_19264938 | NSP3 | hCoV-19/Spain/CT-HUGTiP-H5R187/2024 | G | 773 | V | 177 | 20240706 |
| EPI_ISL_17924269 | NSP3 | hCoV-19/Australia/NSW-ICPMR-48230/2023 | G | 773 | A | 9 | 20230621 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | G | 773 | L | 12 | 20220927 |
| EPI_ISL_16532175 | NSP3 | hCoV-19/Austria/AGES-1169280/2022 | Q | 774 | E | 19 | 20221227 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | Q | 774 | T | 8 | 20221201 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | Q | 774 | M | 2 | 20210520 |
| EPI_ISL_19334603 | NSP3 | hCoV-19/Egypt/CPHL-EGY24159/2024 | Q | 774 | K | 113 | 20240625 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | Q | 774 | A | 1 | 20210804 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | Q | 774 | N | 43 | 20240327 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | Q | 774 | insIEL | 10 | 20220620 |
| EPI_ISL_12291250 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0981/2022 | Q | 774 | G | 2 | 20220121 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | Q | 774 | F | 3 | 20220723 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Q | 774 | del | 54 | 20240904 |
| EPI_ISL_16583533 | NSP3 | hCoV-19/Austria/AGES-1101834/2023 | Q | 774 | V | 8 | 20230103 |
| EPI_ISL_17695318 | NSP3 | hCoV-19/Peru/PIU-INS-44383/2023 | Q | 774 | P | 8 | 20230330 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | Q | 774 | insASFDNF | 5 | 20230404 |
| EPI_ISL_19508854 | NSP3 | hCoV-19/Iran/NIC-11Dey-75/2023 | Q | 774 | stop | 6 | 20231216 |
| EPI_ISL_19362370 | NSP3 | hCoV-19/USA/OH-CDC-LC1115248/2024 | Q | 774 | H | 136 | 20240819 |
| EPI_ISL_19469188 | NSP3 | hCoV-19/env/Ukraine/86366/2024 | Q | 774 | insRTPL | 1 | 20240701 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | Q | 774 | S | 2 | 20221213 |
| EPI_ISL_19816602 | NSP3 | hCoV-19/South Korea/KDCA297226/2025 | Q | 774 | L | 103 | 20250225 |
| EPI_ISL_19702008 | NSP3 | hCoV-19/Canada/ON-PHL-202502457/2025 | Q | 774 | R | 1191 | 20250120 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | Q | 774 | D | 2 | 20210802 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | Q | 774 | W | 1 | 20220927 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | Q | 774 | insstop | 1 | 20211222 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | Q | 775 | T | 5 | 20220927 |
| EPI_ISL_19807128 | NSP3 | hCoV-19/Canada/ON-KHS-202500527-v2/2025 | Q | 775 | H | 303 | 20250205 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | Q | 775 | I | 1 | 20200807 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | Q | 775 | K | 95 | 20241113 |
| EPI_ISL_4122353 | NSP3 | hCoV-19/England/PHEC-X308X06F/2021 | Q | 775 | insRRC | 1 | 20210903 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | Q | 775 | N | 2 | 20220427 |
| EPI_ISL_15846194 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-118134/2022 | Q | 775 | stop | 16 | 20221108 |
| EPI_ISL_19822302 | NSP3 | hCoV-19/USA/VA-GBW-GKISBBBE03861/2025 | Q | 775 | L | 126 | 20250326 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | Q | 775 | V | 8 | 20221201 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Q | 775 | del | 77 | 20240904 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | Q | 775 | W | 3 | 20211031 |
| EPI_ISL_19384542 | NSP3 | hCoV-19/Hubei/HCDC-HG6756/2024 | Q | 775 | P | 21 | 20240811 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | Q | 775 | D | 1 | 20220723 |
| EPI_ISL_1988199 | NSP3 | hCoV-19/Germany/un-ChVir-LB-210316-5789/2021 | Q | 775 | Y | 1 | 20210304 |
| EPI_ISL_19774698 | NSP3 | hCoV-19/Slovenia/1002835/2025 | Q | 775 | R | 287 | 20250109 |
| EPI_ISL_19505759 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRSZK/2024 | Q | 775 | E | 10 | 20240923 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | Q | 775 | S | 3 | 20220602 |
| EPI_ISL_4122617 | NSP3 | hCoV-19/England/PHEC-X308X8C1/2021 | Q | 775 | G | 1 | 20210903 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | F | 776 | N | 6 | 20220812 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | F | 776 | Q | 1 | 20210424 |
| EPI_ISL_19800988 | NSP3 | hCoV-19/Brazil/CE-LACENCE-232524854/2025 | F | 776 | C | 38 | 20250109 |
| EPI_ISL_19804228 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC46298/2025 | F | 776 | V | 31 | 20250313 |
| EPI_ISL_19739755 | NSP3 | hCoV-19/USA/MI-UM-10061746146/2025 | F | 776 | Y | 19 | 20250111 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | F | 776 | D | 2 | 20210327 |
| EPI_ISL_6125400 | NSP3 | hCoV-19/Japan/20210815-33422/2021 | F | 776 | stop | 2 | 20210815 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | F | 776 | W | 10 | 20221201 |
| EPI_ISL_18983069 | NSP3 | hCoV-19/Chongqing/YBCDC-S6733/2024 | F | 776 | del | 70 | 20240304 |
| EPI_ISL_19831689 | NSP3 | hCoV-19/Luxembourg/LNS7203079/2025 | F | 776 | L | 415 | 20250313 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | F | 776 | H | 6 | 20220509 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | F | 776 | T | 3 | 20211031 |
| EPI_ISL_5054148 | NSP3 | hCoV-19/Senegal/cTE BM 0259/2020 | F | 776 | insVLVHIXRLLHLXWXstopXYXXT | 1 | 20200626 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | F | 776 | P | 1 | 20210428 |
| EPI_ISL_18921353 | NSP3 | hCoV-19/USA/IN-CDC-LC1096322/2024 | F | 776 | S | 195 | 20240208 |
| EPI_ISL_18105776 | NSP3 | hCoV-19/Shanghai/SCDC-XG07-11072/2023 | F | 776 | I | 9 | 20230726 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | G | 777 | W | 3 | 20230401 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | G | 777 | stop | 2 | 20220209 |
| EPI_ISL_17321780 | NSP3 | hCoV-19/Canada/QC-L00594909001/2023 | G | 777 | insC | 1 | 20230311 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | G | 777 | R | 5 | 20220427 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | G | 777 | F | 4 | 20210823 |
| EPI_ISL_17372566 | NSP3 | hCoV-19/India/TN-SPHL-2877/2023 | G | 777 | P | 2 | 20230228 |
| EPI_ISL_14947205 | NSP3 | hCoV-19/Japan/RIMD14417/2022 | G | 777 | E | 3 | 20220725 |
| EPI_ISL_5054148 | NSP3 | hCoV-19/Senegal/cTE BM 0259/2020 | G | 777 | J | 1 | 20200626 |
| EPI_ISL_19765178 | NSP3 | hCoV-19/USA/NY-PRL-250225_82C07/2025 | G | 777 | D | 328 | 20250214 |
| EPI_ISL_19384542 | NSP3 | hCoV-19/Hubei/HCDC-HG6756/2024 | G | 777 | V | 19 | 20240811 |
| EPI_ISL_19645825 | NSP3 | hCoV-19/Japan/FR093-0083/2024 | G | 777 | C | 349 | 20241125 |
| EPI_ISL_19299517 | NSP3 | hCoV-19/Hubei/HCDC-HG5858/2024 | G | 777 | A | 10 | 20240701 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | G | 777 | N | 14 | 20220927 |
| EPI_ISL_18983069 | NSP3 | hCoV-19/Chongqing/YBCDC-S6733/2024 | G | 777 | del | 74 | 20240304 |
| EPI_ISL_6125400 | NSP3 | hCoV-19/Japan/20210815-33422/2021 | G | 777 | H | 1 | 20210815 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | G | 777 | T | 2 | 20210424 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | G | 777 | M | 4 | 20210701 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | G | 777 | insstopX | 1 | 20200626 |
| EPI_ISL_19807052 | NSP3 | hCoV-19/Canada/ON-HSC-202501375-v1/2025 | G | 777 | S | 618 | 20250223 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | G | 777 | insLstopEKstopGLLRCLQQstop | 1 | 20210823 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | G | 777 | L | 8 | 20220721 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | P | 778 | W | 74 | 20240327 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | P | 778 | I | 5 | 20220721 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | P | 778 | C | 7 | 20230404 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | P | 778 | M | 2 | 20220723 |
| EPI_ISL_15814054 | NSP3 | hCoV-19/Brazil/ES-LACENES-321312066/2022 | P | 778 | stop | 6 | 20221015 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | P | 778 | N | 2 | 20210803 |
| EPI_ISL_18983069 | NSP3 | hCoV-19/Chongqing/YBCDC-S6733/2024 | P | 778 | del | 87 | 20240304 |
| EPI_ISL_8809248 | NSP3 | hCoV-19/Sweden/03_SE600_000200282483N2/2021 | P | 778 | V | 3 | 20211223 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | P | 778 | G | 1 | 20211011 |
| EPI_ISL_19802091 | NSP3 | hCoV-19/USA/CA-PFZ04720/2025 | P | 778 | L | 1770 | 20250223 |
| EPI_ISL_1178786 | NSP3 | hCoV-19/England/OXON-F69886/2021 | P | 778 | insstopEKstopGLLRCL | 1 | 20210205 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | P | 778 | D | 3 | 20220927 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | P | 778 | T | 10 | 20230401 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | P | 778 | F | 3 | 20220812 |
| EPI_ISL_19731884 | NSP3 | hCoV-19/England/CLIMB-CM7YK64S/2025 | P | 778 | Q | 88 | 20250114 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | P | 778 | E | 2 | 20210701 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | P | 778 | K | 3 | 20230217 |
| EPI_ISL_19311772 | NSP3 | hCoV-19/Singapore/R44MQ38/2024 | P | 778 | R | 8 | 20240717 |
| EPI_ISL_5854760 | NSP3 | hCoV-19/Nigeria/MRL-OS-2079/2021 | P | 778 | A | 22 | 20210630 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | P | 778 | H | 4 | 20220427 |
| EPI_ISL_19820047 | NSP3 | hCoV-19/Canada/ON-PHL-202504973/2025 | P | 778 | S | 3367 | 20250318 |
| EPI_ISL_19192501 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16036/2024 | T | 779 | S | 119 | 20240327 |
| EPI_ISL_19831971 | NSP3 | hCoV-19/Wales/CLIMB-CM7YF8JB/2025 | T | 779 | I | 12196 | 20250331 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | T | 779 | insstopC | 63 | 20220604 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | T | 779 | insQstop | 1 | 20230401 |
| EPI_ISL_14963197 | NSP3 | hCoV-19/USA/CA-FG-293735/2022 | T | 779 | V | 6 | 20220831 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | T | 779 | H | 1 | 20210727 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | T | 779 | K | 1 | 20220723 |
| EPI_ISL_13622805 | NSP3 | hCoV-19/Turkey/HSGM-IST-02297/2022 | T | 779 | Y | 1 | 20220622 |
| EPI_ISL_10523160 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-9828/2022 | T | 779 | R | 4 | 20220209 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | T | 779 | G | 3 | 20230507 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | T | 779 | stop | 6 | 20211031 |
| EPI_ISL_922179 | NSP3 | hCoV-19/England/OXON-F4BBEB/2021 | T | 779 | insC | 1 | 20210104 |
| EPI_ISL_14224102 | NSP3 | hCoV-19/USA/ID-IBL-835609/2022 | T | 779 | L | 12 | 20220708 |
| EPI_ISL_18983069 | NSP3 | hCoV-19/Chongqing/YBCDC-S6733/2024 | T | 779 | del | 72 | 20240304 |
| EPI_ISL_19260486 | NSP3 | hCoV-19/Russia/SPE-RII-MH192212S/2024 | T | 779 | A | 274 | 20240523 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 779 | D | 6 | 20230404 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | T | 779 | insI | 1 | 20220729 |
| EPI_ISL_17419775 | NSP3 | hCoV-19/USA/CA-CDPH-500105042/2023 | T | 779 | N | 19 | 20230207 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | T | 779 | C | 3 | 20230401 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | T | 779 | Q | 6 | 20240904 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | T | 779 | F | 1 | 20210803 |
| EPI_ISL_15814054 | NSP3 | hCoV-19/Brazil/ES-LACENES-321312066/2022 | T | 779 | P | 17 | 20221015 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | Y | 780 | N | 11 | 20230404 |
| EPI_ISL_19802097 | NSP3 | hCoV-19/USA/CA-PFZ04728/2025 | Y | 780 | C | 270 | 20250303 |
| EPI_ISL_10523160 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-9828/2022 | Y | 780 | V | 2 | 20220209 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | Y | 780 | Q | 9 | 20220723 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | Y | 780 | H | 22 | 20230401 |
| EPI_ISL_11755369 | NSP3 | hCoV-19/Thailand/NIC_SNI_SEQ12488/2022 | Y | 780 | G | 2 | 20220227 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | Y | 780 | stop | 14 | 20221226 |
| EPI_ISL_11370187 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-45/2022 | Y | 780 | K | 4 | 20220220 |
| EPI_ISL_19799980 | NSP3 | hCoV-19/USA/TX-HMH-M-147336/2025 | Y | 780 | F | 46 | 20250119 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | Y | 780 | T | 3 | 20220117 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | Y | 780 | A | 11 | 20220620 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | Y | 780 | insSR | 1 | 20211222 |
| EPI_ISL_18119003 | NSP3 | hCoV-19/Wales/CLIMB-CM7YJZNZ/2023 | Y | 780 | W | 9 | 20230731 |
| EPI_ISL_18983069 | NSP3 | hCoV-19/Chongqing/YBCDC-S6733/2024 | Y | 780 | del | 72 | 20240304 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | Y | 780 | R | 1 | 20211109 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | Y | 780 | I | 5 | 20220812 |
| EPI_ISL_9856560 | NSP3 | hCoV-19/Finland/THL-202205395/2022 | Y | 780 | D | 1 | 20220118 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | Y | 780 | M | 2 | 20210701 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | Y | 780 | L | 7 | 20220602 |
| EPI_ISL_16423932 | NSP3 | hCoV-19/Turkey/KSS-KEAH4903226159/2022 | Y | 780 | S | 3 | 20221128 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | Y | 780 | E | 4 | 20230507 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | L | 781 | E | 2 | 20210717 |
| EPI_ISL_19416470 | NSP3 | hCoV-19/Japan/FR049-0811/2024 | L | 781 | M | 46 | 20240819 |
| EPI_ISL_19510975 | NSP3 | hCoV-19/USA/LA-EVTL23051/2024 | L | 781 | V | 69 | 20240913 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | L | 781 | C | 5 | 20221226 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | L | 781 | G | 1 | 20210813 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | L | 781 | T | 2 | 20220927 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | L | 781 | K | 3 | 20220723 |
| EPI_ISL_8809248 | NSP3 | hCoV-19/Sweden/03_SE600_000200282483N2/2021 | L | 781 | insW | 1 | 20211223 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | L | 781 | A | 2 | 20220209 |
| EPI_ISL_1178786 | NSP3 | hCoV-19/England/OXON-F69886/2021 | L | 781 | N | 1 | 20210205 |
| EPI_ISL_19339158 | NSP3 | hCoV-19/USA/CA-GBW-GKPLAAAA39430/2024 | L | 781 | S | 162 | 20240806 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | L | 781 | W | 11 | 20230507 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | L | 781 | I | 10 | 20230404 |
| EPI_ISL_10678682 | NSP3 | hCoV-19/Turkey/HSGM-G1540/2022 | L | 781 | P | 1 | 20220214 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 781 | del | 47 | 20240904 |
| EPI_ISL_19822733 | NSP3 | hCoV-19/Finland/THL-01162/2025 | L | 781 | F | 839 | 20250306 |
| EPI_ISL_14901067 | NSP3 | hCoV-19/Mexico/SIN_CIAD-MZT_S8974/2022 | L | 781 | stop | 69 | 20220804 |
| EPI_ISL_10283488 | NSP3 | hCoV-19/India/DL-AIIMS-COVTN65418/2022 | D | 782 | F | 1 | 20220111 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | D | 782 | del | 56 | 20240904 |
| EPI_ISL_19760408 | NSP3 | hCoV-19/USA/NY-CDC-LC1133399/2025 | D | 782 | B | 47 | 20250220 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | D | 782 | S | 6 | 20220209 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | D | 782 | K | 6 | 20230404 |
| EPI_ISL_19724999 | NSP3 | hCoV-19/Japan/FR079-0191/2024 | D | 782 | Y | 128 | 20240927 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | D | 782 | M | 8 | 20220628 |
| EPI_ISL_15215307 | NSP3 | hCoV-19/USA/IL-92222137/2022 | D | 782 | H | 2 | 20220921 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | D | 782 | I | 20 | 20221228 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | D | 782 | Q | 11 | 20220620 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | D | 782 | L | 2 | 20210701 |
| EPI_ISL_18135102 | NSP3 | hCoV-19/Wales/CLIMB-CM7YE695/2023 | D | 782 | A | 42 | 20230804 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | D | 782 | insLMLLKstop | 1 | 20210803 |
| EPI_ISL_19361618 | NSP3 | hCoV-19/Canada/ON-KHS-03929-v1/2024 | D | 782 | G | 803 | 20240816 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | D | 782 | T | 2 | 20220927 |
| EPI_ISL_19052330 | NSP3 | hCoV-19/USA/CA-SEARCH-230541/2023 | D | 782 | V | 14 | 20231204 |
| EPI_ISL_19829204 | NSP3 | hCoV-19/USA/VA-CDC-LC1136469/2025 | D | 782 | N | 2613 | 20250403 |
| EPI_ISL_11739709 | NSP3 | hCoV-19/Thailand/NIC_SKM_SEQ12524/2022 | D | 782 | R | 3 | 20220310 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | D | 782 | stop | 2 | 20210622 |
| EPI_ISL_19536192 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422167264/2024 | D | 782 | E | 339 | 20241011 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | G | 783 | C | 2 | 20220209 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | G | 783 | D | 12 | 20220620 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | G | 783 | Q | 1 | 20200729 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | G | 783 | N | 11 | 20230401 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | G | 783 | F | 5 | 20230404 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | G | 783 | T | 3 | 20220509 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | G | 783 | S | 3 | 20220723 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | G | 783 | E | 15 | 20220628 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | G | 783 | W | 30 | 20221228 |
| EPI_ISL_15287295 | NSP3 | hCoV-19/Turkey/KSS-UEAH4830970777/2022 | G | 783 | R | 8 | 20220919 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | G | 783 | V | 9 | 20220927 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | G | 783 | insLLRCLQQstopTTL | 1 | 20210622 |
| EPI_ISL_18622953 | NSP3 | hCoV-19/USA/IL-C23WGS3427/2023 | G | 783 | stop | 16 | 20231127 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | G | 783 | del | 55 | 20240904 |
| EPI_ISL_13847303 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2946/2022 | G | 783 | A | 4 | 20220630 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | G | 783 | K | 65 | 20220222 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | G | 783 | L | 4 | 20220729 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | A | 784 | C | 3 | 20220927 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | A | 784 | L | 13 | 20220628 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | A | 784 | M | 27 | 20221228 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | A | 784 | I | 8 | 20221226 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 784 | del | 51 | 20240904 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | A | 784 | Q | 1 | 20210805 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | A | 784 | K | 1 | 20220723 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 784 | D | 6 | 20220210 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | A | 784 | E | 1 | 20210717 |
| EPI_ISL_3588722 | NSP3 | hCoV-19/USA/ID-IBL-746151/2021 | A | 784 | N | 1 | 20210804 |
| EPI_ISL_18766340 | NSP3 | hCoV-19/France/IDF-IPP32517/2023 | A | 784 | S | 290 | 20231218 |
| EPI_ISL_12413692 | NSP3 | hCoV-19/Italy/LIG-190173093/2022 | A | 784 | V | 11 | 20220426 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | A | 784 | R | 2 | 20210823 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | A | 784 | Y | 1 | 20210802 |
| EPI_ISL_19348686 | NSP3 | hCoV-19/Morocco/12/2020 | A | 784 | H | 1 | 20201107 |
| EPI_ISL_5074496 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-42828/2020 | A | 784 | P | 1 | 20200718 |
| EPI_ISL_12582717 | NSP3 | hCoV-19/Turkey/HSGM-G8459/2022 | A | 784 | G | 25 | 20220401 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | A | 784 | stop | 4 | 20210812 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | A | 784 | T | 66 | 20221201 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | A | 784 | W | 2 | 20210812 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | D | 785 | R | 1 | 20220723 |
| EPI_ISL_17596354 | NSP3 | hCoV-19/Singapore/R27AMR146/2023 | D | 785 | B | 5 | 20230424 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | D | 785 | stop | 9 | 20221122 |
| EPI_ISL_17760728 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-US-3379/2023 | D | 785 | G | 26 | 20230508 |
| EPI_ISL_7493997 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081621-987/2021 | D | 785 | insstop | 1 | 20210816 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | D | 785 | M | 9 | 20220628 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | D | 785 | T | 1 | 20210424 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | D | 785 | P | 1 | 20210805 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | D | 785 | S | 60 | 20220509 |
| EPI_ISL_19349012 | NSP3 | hCoV-19/USA/TX-HMH-M-143606/2024 | D | 785 | E | 47 | 20240726 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | D | 785 | insDLNQ | 5 | 20230404 |
| EPI_ISL_19823412 | NSP3 | hCoV-19/Japan/FR021-0274/2025 | D | 785 | V | 57 | 20250316 |
| EPI_ISL_18438007 | NSP3 | hCoV-19/USA/TX-PHH-CS-02977/2023 | D | 785 | H | 9 | 20231007 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | D | 785 | K | 2 | 20210823 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | D | 785 | del | 59 | 20240904 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | D | 785 | N | 44 | 20221226 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | D | 785 | C | 1 | 20210805 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 785 | F | 1 | 20220210 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | D | 785 | I | 3 | 20210803 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | D | 785 | L | 18 | 20230401 |
| EPI_ISL_14876416 | NSP3 | hCoV-19/Japan/PG-339667/2022 | D | 785 | Y | 13 | 20220812 |
| EPI_ISL_16330214 | NSP3 | hCoV-19/Germany/NW-RKI-I-1072990/2022 | D | 785 | A | 254 | 20221214 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | V | 786 | stop | 56 | 20220222 |
| EPI_ISL_16623142 | NSP3 | hCoV-19/Latvia/209135/2022 | V | 786 | F | 44 | 20220907 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | V | 786 | Y | 3 | 20211109 |
| EPI_ISL_19641238 | NSP3 | hCoV-19/USA/CA-PFZ02427/2024 | V | 786 | G | 4 | 20240925 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | V | 786 | T | 2 | 20210622 |
| EPI_ISL_10045278 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344797/2022 | V | 786 | D | 2 | 20220207 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | V | 786 | insQEGVL | 1 | 20210327 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | V | 786 | insIIH | 1 | 20210628 |
| EPI_ISL_1730447 | NSP3 | hCoV-19/Scotland/OXON-F7E1CF/2021 | V | 786 | R | 1 | 20210318 |
| EPI_ISL_19140391 | NSP3 | hCoV-19/Australia/TAS007124/2024 | V | 786 | I | 79 | 20240312 |
| EPI_ISL_5437257 | NSP3 | hCoV-19/Sweden/UUH-000100015619/2021 | V | 786 | insXX | 1 | 20210506 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 786 | L | 64 | 20230404 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | V | 786 | C | 8 | 20221122 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | V | 786 | H | 4 | 20211011 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | V | 786 | del | 56 | 20240904 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 786 | M | 3 | 20220210 |
| EPI_ISL_19662144 | NSP3 | hCoV-19/Singapore/R65MQ108/2024 | V | 786 | A | 239 | 20241203 |
| EPI_ISL_5589605 | NSP3 | hCoV-19/USA/NC-ECU-S2100918/2021 | V | 786 | N | 1 | 20210219 |
| EPI_ISL_12610878 | NSP3 | hCoV-19/Turkey/HSGM-GS2771/2022 | T | 787 | F | 55 | 20220407 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | T | 787 | stop | 3 | 20211109 |
| EPI_ISL_15457460 | NSP3 | hCoV-19/Sweden/03_SE600_500000077705SP/2022 | T | 787 | insXXXXXXXXM | 1 | 20220120 |
| EPI_ISL_5054148 | NSP3 | hCoV-19/Senegal/cTE BM 0259/2020 | T | 787 | E | 1 | 20200626 |
| EPI_ISL_19373292 | NSP3 | hCoV-19/env/Germany/BY-LGL-6324003/2024 | T | 787 | L | 18 | 20240812 |
| EPI_ISL_5441243 | NSP3 | hCoV-19/USA/ID-IBL-758886/2021 | T | 787 | insstop | 1 | 20210918 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | T | 787 | P | 2 | 20210803 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | T | 787 | H | 1 | 20210803 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | T | 787 | R | 1 | 20210622 |
| EPI_ISL_19822796 | NSP3 | hCoV-19/Denmark/DCGC-692065/2025 | T | 787 | I | 3720 | 20250317 |
| EPI_ISL_19784410 | NSP3 | hCoV-19/New Zealand/25YA0672/2025 | T | 787 | S | 412 | 20250303 |
| EPI_ISL_19212025 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-0955/2024 | T | 787 | N | 21 | 20240428 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | T | 787 | W | 1 | 20210823 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | T | 787 | insL | 1 | 20210805 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 787 | K | 3 | 20220210 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | T | 787 | Y | 8 | 20221122 |
| EPI_ISL_17699791 | NSP3 | hCoV-19/Morocco/NIH-1290/2023 | T | 787 | A | 18 | 20230516 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | T | 787 | D | 1 | 20220927 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | T | 787 | Q | 6 | 20230401 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | T | 787 | del | 59 | 20240904 |
| EPI_ISL_12529733 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-Vijaya-192214026/2022 | T | 787 | V | 4 | 20220422 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | T | 787 | C | 4 | 20220723 |
| EPI_ISL_13633243 | NSP3 | hCoV-19/Sweden/03_SE600_500000060283SP/2022 | T | 787 | insLKstop | 2 | 20220106 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | T | 787 | insIHM | 1 | 20210701 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | T | 787 | M | 30 | 20221228 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | K | 788 | insN | 1 | 20211019 |
| EPI_ISL_18821759 | NSP3 | hCoV-19/Israel/SMC-7116424/2023 | K | 788 | E | 13 | 20231227 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | K | 788 | del | 53 | 20240904 |
| EPI_ISL_14881063 | NSP3 | hCoV-19/USA/ID-IBL-846239/2022 | K | 788 | insstopNL | 1 | 20220816 |
| EPI_ISL_19613288 | NSP3 | hCoV-19/Thailand/MTM_01_1742/2024 | K | 788 | T | 81 | 20240710 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | K | 788 | S | 2 | 20210727 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | K | 788 | L | 34 | 20230401 |
| EPI_ISL_18607090 | NSP3 | hCoV-19/South Africa/UCT-NHLS-K059830/2023 | K | 788 | R | 107 | 20231117 |
| EPI_ISL_15638515 | NSP3 | hCoV-19/USA/IL-CDC-LC0920109/2022 | K | 788 | I | 39 | 20221021 |
| EPI_ISL_8030422 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-69536/2021 | K | 788 | insstopN | 7 | 20211215 |
| EPI_ISL_8807024 | NSP3 | hCoV-19/India/GA-NCCS-3055100255359/2021 | K | 788 | D | 1 | 20211004 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 788 | V | 2 | 20220210 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | K | 788 | A | 3 | 20220927 |
| EPI_ISL_18260742 | NSP3 | hCoV-19/USA/CA-HLX-STM-77ABHBHDH/2023 | K | 788 | N | 29 | 20230819 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | K | 788 | Q | 4 | 20230507 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | K | 788 | stop | 10 | 20221122 |
| EPI_ISL_15783596 | NSP3 | hCoV-19/USA/ID-IBL-862923/2022 | K | 788 | insstopNLI | 1 | 20221101 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | K | 788 | H | 9 | 20211227 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | K | 788 | G | 7 | 20230404 |
| EPI_ISL_19784028 | NSP3 | hCoV-19/USA/PA-CDC-LC1134758/2025 | I | 789 | T | 773 | 20250303 |
| EPI_ISL_18689962 | NSP3 | hCoV-19/USA/TX-HMH-M-136048/2023 | I | 789 | N | 25 | 20231206 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | I | 789 | del | 54 | 20240904 |
| EPI_ISL_19696764 | NSP3 | hCoV-19/Turkey/HSGM-AA002444/2023 | I | 789 | R | 5 | 20231023 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | I | 789 | insN | 1 | 20220726 |
| EPI_ISL_18617860 | NSP3 | hCoV-19/Albania/295434/2023 | I | 789 | K | 14 | 20230607 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | I | 789 | stop | 66 | 20221201 |
| EPI_ISL_19511295 | NSP3 | hCoV-19/Netherlands/ZH-EMC-8917/2024 | I | 789 | L | 104 | 20240902 |
| EPI_ISL_10835205 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-92037/2022 | I | 789 | J | 6 | 20220216 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | I | 789 | S | 1 | 20220509 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | I | 789 | C | 2 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 789 | A | 2 | 20220210 |
| EPI_ISL_1544066 | NSP3 | hCoV-19/India/MH-NCCS-30200101197/2021 | I | 789 | insWMEstopCXXX | 1 | 20210226 |
| EPI_ISL_19782776 | NSP3 | hCoV-19/Chile/MA-ISPC-18488/2025 | I | 789 | V | 358 | 20250227 |
| EPI_ISL_17708966 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200395873N2/2022 | I | 789 | insXX | 1 | 20220428 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | I | 789 | Y | 5 | 20230404 |
| EPI_ISL_19460314 | NSP3 | hCoV-19/USA/SC-SCDHEC-0202/2024 | I | 789 | M | 51 | 20240911 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | K | 790 | insT | 1 | 20210803 |
| EPI_ISL_12888997 | NSP3 | hCoV-19/USA/NJ-CDC-LC0630939/2022 | K | 790 | Q | 9 | 20220511 |
| EPI_ISL_14287966 | NSP3 | hCoV-19/USA/ID-IBL-838859/2022 | K | 790 | insstopNLI | 15 | 20220722 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | K | 790 | N | 29 | 20221228 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | K | 790 | I | 17 | 20220823 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | K | 790 | del | 50 | 20240904 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | K | 790 | F | 1 | 20220927 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | K | 790 | S | 3 | 20220729 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | K | 790 | P | 2 | 20231218 |
| EPI_ISL_17986238 | NSP3 | hCoV-19/USA/FL-CDC-QDX81999875/2023 | K | 790 | E | 10 | 20230622 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | K | 790 | Y | 2 | 20220509 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 790 | V | 3 | 20220210 |
| EPI_ISL_5589605 | NSP3 | hCoV-19/USA/NC-ECU-S2100918/2021 | K | 790 | H | 1 | 20210219 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | K | 790 | T | 17 | 20230217 |
| EPI_ISL_13925439 | NSP3 | hCoV-19/Germany/ST-RKI-I-892967/2022 | K | 790 | stop | 1 | 20220430 |
| EPI_ISL_15783596 | NSP3 | hCoV-19/USA/ID-IBL-862923/2022 | K | 790 | M | 2 | 20221101 |
| EPI_ISL_17275377 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45903/2023 | K | 790 | L | 1 | 20230213 |
| EPI_ISL_10047233 | NSP3 | hCoV-19/Switzerland/SG-CLM-02095105/2022 | K | 790 | insLI | 7 | 20220209 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | K | 790 | W | 7 | 20230401 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | K | 790 | insstopNILCFTstopstop | 45 | 20220222 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | K | 790 | A | 2 | 20230507 |
| EPI_ISL_19803426 | NSP3 | hCoV-19/USA/WI-WSLH-2500927/2025 | K | 790 | R | 169 | 20250225 |
| EPI_ISL_8807024 | NSP3 | hCoV-19/India/GA-NCCS-3055100255359/2021 | P | 791 | insTVWSNLFGWSstopCYstopNKTSstopFTstopRstopNILCFTstopstopstop | 1 | 20211004 |
| EPI_ISL_1077798 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-23268/2021 | P | 791 | insQI | 1 | 20210112 |
| EPI_ISL_18808114 | NSP3 | hCoV-19/USA/CO-CDPHE-41614998/2023 | P | 791 | L | 62 | 20231214 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | P | 791 | C | 1 | 20220818 |
| EPI_ISL_14287966 | NSP3 | hCoV-19/USA/ID-IBL-838859/2022 | P | 791 | I | 34 | 20220722 |
| EPI_ISL_17033955 | NSP3 | hCoV-19/Puerto Rico/PR-002991353/2022 | P | 791 | insLI | 1 | 20221201 |
| EPI_ISL_12694357 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467171/2022 | P | 791 | insSstopFTstopRstopNILCFTstopstopstop | 3 | 20220124 |
| EPI_ISL_14723085 | NSP3 | hCoV-19/USA/MA-NEIDL-05145/2022 | P | 791 | insII | 3 | 20220301 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | P | 791 | R | 1 | 20230507 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | P | 791 | N | 3 | 20211222 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | P | 791 | insNLIITstopRstopNILCFTstopstopstop | 1 | 20221130 |
| EPI_ISL_15420142 | NSP3 | hCoV-19/Spain/CL-COV36312/2022 | P | 791 | A | 1 | 20220822 |
| EPI_ISL_3299465 | NSP3 | hCoV-19/Sweden/UUH-000199814345N2/2021 | P | 791 | insNLIIXstopRstopNILCFTstopstopstop | 1 | 20210428 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | P | 791 | insELMLLKstopNLII | 1 | 20230401 |
| EPI_ISL_13736603 | NSP3 | hCoV-19/Chile/LL-79084/2022 | P | 791 | Q | 1 | 20220622 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | P | 791 | insSQFTstopRstopNILCFTstopstopstop | 1 | 20200807 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | P | 791 | K | 11 | 20230404 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | P | 791 | H | 16 | 20220723 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | P | 791 | insELMLLKstopNLIITstopRstopNILCFTstopstopstop | 1 | 20210917 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | P | 791 | insL | 1 | 20211222 |
| EPI_ISL_8803747 | NSP3 | hCoV-19/India/GA-NCCS-C59074/2021 | P | 791 | insNILCFTstopstopstop | 8 | 20210720 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | P | 791 | M | 5 | 20230401 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | P | 791 | W | 1 | 20210403 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | P | 791 | del | 55 | 20240904 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | P | 791 | stop | 69 | 20221130 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 791 | E | 1 | 20220210 |
| EPI_ISL_19772845 | NSP3 | hCoV-19/USA/NH-NHPHL-01280012/2025 | P | 791 | S | 1410 | 20250110 |
| EPI_ISL_12291250 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0981/2022 | P | 791 | V | 10 | 20220121 |
| EPI_ISL_19299353 | NSP3 | hCoV-19/Hubei/HCDC-XG6000/2024 | P | 791 | T | 60 | 20240715 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | H | 792 | del | 53 | 20240904 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | H | 792 | T | 4 | 20221228 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | H | 792 | S | 8 | 20220726 |
| EPI_ISL_19833204 | NSP3 | hCoV-19/Poland/Kce-51/2025 | H | 792 | Y | 2830 | 20250411 |
| EPI_ISL_19542025 | NSP3 | hCoV-19/Russia/TA-RII-MH205537S/2024 | H | 792 | L | 305 | 20240911 |
| EPI_ISL_14881063 | NSP3 | hCoV-19/USA/ID-IBL-846239/2022 | H | 792 | K | 10 | 20220816 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | H | 792 | insstopFTstopRstop | 1 | 20211109 |
| EPI_ISL_19805530 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U561-1/2025 | H | 792 | R | 1060 | 20250219 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | H | 792 | insstopstop | 1 | 20211122 |
| EPI_ISL_15783596 | NSP3 | hCoV-19/USA/ID-IBL-862923/2022 | H | 792 | V | 2 | 20221101 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | H | 792 | D | 1 | 20220509 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | H | 792 | insMD | 1 | 20210823 |
| EPI_ISL_5559098 | NSP3 | hCoV-19/USA/MN-CDC-IBX825037458133/2021 | H | 792 | insT | 10 | 20211006 |
| EPI_ISL_8146196 | NSP3 | hCoV-19/Sweden/UUH-500000036492SP/2021 | H | 792 | insXXXX | 1 | 20211209 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | H | 792 | F | 15 | 20220729 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 792 | A | 1 | 20220210 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | H | 792 | E | 2 | 20211031 |
| EPI_ISL_12934369 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1589/2022 | H | 792 | insL | 2 | 20220119 |
| EPI_ISL_3299455 | NSP3 | hCoV-19/Sweden/UUH-000199828725N2/2021 | H | 792 | insXX | 1 | 20210428 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | H | 792 | C | 1 | 20210622 |
| EPI_ISL_13014160 | NSP3 | hCoV-19/Switzerland/BE-IFIK-220523_os_55/2022 | H | 792 | Q | 12 | 20220510 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | H | 792 | G | 1 | 20230507 |
| EPI_ISL_19619156 | NSP3 | hCoV-19/Brazil/GO-LACENGO-520580312/2024 | H | 792 | N | 23 | 20240924 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | H | 792 | I | 10 | 20230217 |
| EPI_ISL_19586503 | NSP3 | hCoV-19/England/CLIMB-CM7YMRK1/2024 | H | 792 | P | 137 | 20241118 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | H | 792 | stop | 3 | 20220823 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | N | 793 | del | 61 | 20240904 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | N | 793 | P | 1 | 20211011 |
| EPI_ISL_16063805 | NSP3 | hCoV-19/Denmark/DCGC-621525/2022 | N | 793 | B | 7 | 20221203 |
| EPI_ISL_19553617 | NSP3 | hCoV-19/USA/GA-UM-G88A58Z4/2024 | N | 793 | S | 713 | 20240917 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | N | 793 | M | 51 | 20230401 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | N | 793 | A | 7 | 20231218 |
| EPI_ISL_19751665 | NSP3 | hCoV-19/Canada/BC-BCCDC-768111/2025 | N | 793 | D | 132 | 20250206 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | N | 793 | R | 1 | 20210717 |
| EPI_ISL_18264637 | NSP3 | hCoV-19/USA/TX-HMH-M-132712/2023 | N | 793 | I | 58 | 20230828 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | N | 793 | W | 1 | 20220509 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | N | 793 | stop | 7 | 20220726 |
| EPI_ISL_14881077 | NSP3 | hCoV-19/USA/ID-IBL-847392/2022 | N | 793 | L | 7 | 20220822 |
| EPI_ISL_19622089 | NSP3 | hCoV-19/USA/CA-CDC-2-8135766/2024 | N | 793 | T | 208 | 20241003 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | N | 793 | F | 5 | 20220812 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | N | 793 | Q | 3 | 20220823 |
| EPI_ISL_17605514 | NSP3 | hCoV-19/Canada/AB-ABPHL-96883/2023 | N | 793 | H | 26 | 20230412 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | N | 793 | V | 3 | 20230217 |
| EPI_ISL_18286688 | NSP3 | hCoV-19/Luxembourg/LNS2766367/2023 | N | 793 | Y | 18 | 20230829 |
| EPI_ISL_19599492 | NSP3 | hCoV-19/Japan/FR084-0197/2024 | N | 793 | K | 214 | 20240902 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | S | 794 | K | 43 | 20230401 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | S | 794 | del | 68 | 20240904 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | S | 794 | insFYLstopstop | 1 | 20210803 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | S | 794 | M | 5 | 20220721 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | S | 794 | insstopF | 1 | 20200729 |
| EPI_ISL_19784206 | NSP3 | hCoV-19/USA/NC-CDC-LC1134729/2025 | S | 794 | L | 8506 | 20250310 |
| EPI_ISL_18930935 | NSP3 | hCoV-19/USA/CO-CDPHE-41699939/2024 | S | 794 | A | 68 | 20240207 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | S | 794 | insLLKstopNLII | 2 | 20211031 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | S | 794 | Q | 2 | 20211011 |
| EPI_ISL_18052802 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14513/2023 | S | 794 | Y | 44 | 20230620 |
| EPI_ISL_11023775 | NSP3 | hCoV-19/Turkey/HSGM-G2428/2022 | S | 794 | E | 2 | 20220217 |
| EPI_ISL_7551892 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082321-1068/2021 | S | 794 | insLVQLIWMELMLLKstopNLII | 1 | 20210823 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 794 | D | 2 | 20220210 |
| EPI_ISL_18226348 | NSP3 | hCoV-19/env/India/MH-FMR_K4-55a/2023 | S | 794 | H | 5 | 20230315 |
| EPI_ISL_19033081 | NSP3 | hCoV-19/India/MH_BJCOG_6468/2024 | S | 794 | stop | 13 | 20240216 |
| EPI_ISL_15457460 | NSP3 | hCoV-19/Sweden/03_SE600_500000077705SP/2022 | S | 794 | F | 22 | 20220120 |
| EPI_ISL_19742604 | NSP3 | hCoV-19/Chile/VS-9473/2025 | S | 794 | P | 153 | 20250130 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | S | 794 | N | 5 | 20230217 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | S | 794 | I | 16 | 20221226 |
| EPI_ISL_19541100 | NSP3 | hCoV-19/Japan/FR088-0232/2024 | S | 794 | T | 118 | 20241031 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | S | 794 | V | 1 | 20220623 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 794 | C | 2 | 20230101 |
| EPI_ISL_18543751 | NSP3 | hCoV-19/Spain/GA-CHUVI-22288438/2023 | H | 795 | R | 43 | 20231024 |
| EPI_ISL_19664452 | NSP3 | hCoV-19/USA/MN-MDH-45102/2024 | H | 795 | N | 59 | 20241228 |
| EPI_ISL_19357310 | NSP3 | hCoV-19/France/OCC-RELAB-HCL724000347101/2024 | H | 795 | Q | 114 | 20240717 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | H | 795 | del | 70 | 20240904 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | H | 795 | stop | 10 | 20221201 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | H | 795 | insM | 1 | 20210805 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | H | 795 | G | 2 | 20230217 |
| EPI_ISL_19697137 | NSP3 | hCoV-19/Brazil/RS-FIOCRUZ-13266/2024 | H | 795 | Y | 1441 | 20241216 |
| EPI_ISL_5333838 | NSP3 | hCoV-19/Sweden/UUH-000200059909/2021 | H | 795 | insstop | 1 | 20210603 |
| EPI_ISL_18124042 | NSP3 | hCoV-19/Lebanon/SH-100/2023 | H | 795 | L | 69 | 20230314 |
| EPI_ISL_14985022 | NSP3 | hCoV-19/Russia/KDA-RII-MH76780S/2022 | H | 795 | S | 2 | 20220801 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | H | 795 | T | 3 | 20210804 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | H | 795 | C | 62 | 20221130 |
| EPI_ISL_6370707 | NSP3 | hCoV-19/USA/UT-UPHL-211112149274/2021 | H | 795 | D | 1 | 20211025 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | H | 795 | K | 2 | 20211122 |
| EPI_ISL_18052802 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14513/2023 | H | 795 | M | 49 | 20230620 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | H | 795 | V | 42 | 20230401 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | H | 795 | insVstopFRstopstopRITstopstopSTI | 1 | 20220818 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | H | 795 | P | 1 | 20200626 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | H | 795 | F | 3 | 20220721 |
| EPI_ISL_14881077 | NSP3 | hCoV-19/USA/ID-IBL-847392/2022 | H | 795 | I | 4 | 20220822 |
| EPI_ISL_19254110 | NSP3 | hCoV-19/env/Germany/BY-LGL-6273262/2024 | E | 796 | stop | 83 | 20240619 |
| EPI_ISL_18871659 | NSP3 | hCoV-19/USA/CO-CDPHE-41645661/2023 | E | 796 | D | 573 | 20231224 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | E | 796 | R | 9 | 20221201 |
| EPI_ISL_5484739 | NSP3 | hCoV-19/England/PHEC-3M0AAMBA/2021 | E | 796 | N | 1 | 20211011 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | E | 796 | del | 70 | 20240904 |
| EPI_ISL_14253453 | NSP3 | hCoV-19/USA/ID-IBL-838432/2022 | E | 796 | Y | 1 | 20220721 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | E | 796 | S | 4 | 20220509 |
| EPI_ISL_13633249 | NSP3 | hCoV-19/Sweden/03_SE600_000200299066N2/2022 | E | 796 | insRstop | 1 | 20220106 |
| EPI_ISL_16749215 | NSP3 | hCoV-19/England/BRBR-326AC9FD/2023 | E | 796 | Z | 20 | 20230125 |
| EPI_ISL_14881077 | NSP3 | hCoV-19/USA/ID-IBL-847392/2022 | E | 796 | T | 7 | 20220822 |
| EPI_ISL_19745603 | NSP3 | hCoV-19/USA/NY-PRL-250219_81C02/2025 | E | 796 | G | 669 | 20250206 |
| EPI_ISL_14985022 | NSP3 | hCoV-19/Russia/KDA-RII-MH76780S/2022 | E | 796 | L | 18 | 20220801 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | E | 796 | M | 7 | 20211031 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | E | 796 | H | 2 | 20220818 |
| EPI_ISL_18797281 | NSP3 | hCoV-19/USA/CA-SC-282566/2023 | E | 796 | V | 17 | 20231215 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | E | 796 | I | 1 | 20220602 |
| EPI_ISL_17625017 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000160330SP/2022 | E | 796 | insXXX | 1 | 20220203 |
| EPI_ISL_19309147 | NSP3 | hCoV-19/Japan/FR012-0344/2024 | E | 796 | A | 286 | 20240717 |
| EPI_ISL_10082615 | NSP3 | hCoV-19/USA/ID-IBL-789742/2022 | E | 796 | F | 1 | 20220126 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | E | 796 | insVAK | 1 | 20200803 |
| EPI_ISL_19049388 | NSP3 | hCoV-19/Canada/QC-L00721199001/2024 | E | 796 | K | 479 | 20240401 |
| EPI_ISL_17634792 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200407593N2/2022 | E | 796 | insXX | 1 | 20220519 |
| EPI_ISL_19266853 | NSP3 | hCoV-19/Hubei/HCDC-EZ5832/2024 | E | 796 | Q | 113 | 20240701 |
| EPI_ISL_12291250 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0981/2022 | G | 797 | E | 1 | 20220121 |
| EPI_ISL_10082615 | NSP3 | hCoV-19/USA/ID-IBL-789742/2022 | G | 797 | T | 2 | 20220126 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | G | 797 | P | 1 | 20200626 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | G | 797 | L | 9 | 20230404 |
| EPI_ISL_19805515 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U477-1/2025 | G | 797 | S | 256 | 20250213 |
| EPI_ISL_19307928 | NSP3 | hCoV-19/USA/HI-H2329905/2024 | G | 797 | D | 64 | 20240628 |
| EPI_ISL_19425782 | NSP3 | hCoV-19/USA/TX-HMH-M-145321/2024 | G | 797 | del | 72 | 20240820 |
| EPI_ISL_19531664 | NSP3 | hCoV-19/Spain/VC-CVA_LAFE-125530/2024 | G | 797 | R | 12 | 20240803 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | G | 797 | insGFLCTV | 1 | 20200729 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | G | 797 | M | 13 | 20220804 |
| EPI_ISL_10858427 | NSP3 | hCoV-19/Turkey/HSGM-G2233/2022 | G | 797 | I | 2 | 20220217 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | G | 797 | insI | 1 | 20211222 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | G | 797 | W | 1 | 20210807 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | G | 797 | H | 41 | 20230401 |
| EPI_ISL_19499667 | NSP3 | hCoV-19/USA/TX-HMH-M-146129/2024 | G | 797 | V | 124 | 20240905 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | G | 797 | K | 5 | 20220812 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 797 | N | 6 | 20230101 |
| EPI_ISL_16137556 | NSP3 | hCoV-19/USA/ID-IBL-867676/2022 | G | 797 | stop | 9 | 20221201 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | G | 797 | Q | 2 | 20220818 |
| EPI_ISL_19797166 | NSP3 | hCoV-19/Brazil/MG-LACENMG-312305650/2025 | G | 797 | C | 492 | 20250219 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | K | 798 | M | 17 | 20220818 |
| EPI_ISL_7660338 | NSP3 | hCoV-19/Sweden/UUH-000200251290N2/2021 | K | 798 | insstopNIL | 1 | 20211202 |
| EPI_ISL_12529711 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-Matrix-YSG228547/2022 | K | 798 | S | 5 | 20220426 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | K | 798 | A | 1 | 20210803 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | K | 798 | V | 6 | 20230507 |
| EPI_ISL_18989912 | NSP3 | hCoV-19/USA/MS-MSPHL-0190/2024 | K | 798 | stop | 12 | 20240228 |
| EPI_ISL_14881077 | NSP3 | hCoV-19/USA/ID-IBL-847392/2022 | K | 798 | insstop | 4 | 20220822 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | K | 798 | Q | 4 | 20220509 |
| EPI_ISL_19366166 | NSP3 | hCoV-19/USA/TX-HMH-M-144825/2024 | K | 798 | del | 125 | 20240810 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | K | 798 | I | 3 | 20220623 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | K | 798 | G | 1 | 20210327 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | K | 798 | insV | 5 | 20230404 |
| EPI_ISL_9772243 | NSP3 | hCoV-19/Switzerland/VS-ETHZ-35960947/2022 | K | 798 | T | 1 | 20220125 |
| EPI_ISL_13736603 | NSP3 | hCoV-19/Chile/LL-79084/2022 | K | 798 | L | 6 | 20220622 |
| EPI_ISL_18850966 | NSP3 | hCoV-19/New Zealand/24ZA0196/2024 | K | 798 | E | 27 | 20240102 |
| EPI_ISL_19362955 | NSP3 | hCoV-19/New Zealand/24YA6359/2024 | K | 798 | R | 463 | 20240811 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | K | 798 | P | 2 | 20240904 |
| EPI_ISL_14795935 | NSP3 | hCoV-19/Sweden/03_SE600_500000037791SP/2022 | K | 798 | N | 8 | 20220113 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | K | 798 | F | 39 | 20230401 |
| EPI_ISL_18052802 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14513/2023 | K | 798 | insHF | 50 | 20230620 |
| EPI_ISL_10082615 | NSP3 | hCoV-19/USA/ID-IBL-789742/2022 | T | 799 | R | 1 | 20220126 |
| EPI_ISL_491451 | NSP3 | hCoV-19/Costa Rica/INC-0040/2020 | T | 799 | Q | 1 | 20200319 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | T | 799 | insLCTstopstopstopLIstopG | 1 | 20210803 |
| EPI_ISL_19461224 | NSP3 | hCoV-19/USA/NJ-GBW-GKISBBBC45912/2024 | T | 799 | M | 102 | 20240924 |
| EPI_ISL_19366166 | NSP3 | hCoV-19/USA/TX-HMH-M-144825/2024 | T | 799 | del | 113 | 20240810 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 799 | insSstopFTstopRstopNIFM | 2 | 20230101 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | T | 799 | C | 5 | 20231218 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | T | 799 | insSstopFTstopRstopN | 1 | 20210812 |
| EPI_ISL_19324910 | NSP3 | hCoV-19/Spain/MC-HCUVA-70013335/2024 | T | 799 | A | 1877 | 20240715 |
| EPI_ISL_1178755 | NSP3 | hCoV-19/England/OXON-F688D2/2021 | T | 799 | W | 1 | 20210203 |
| EPI_ISL_17591968 | NSP3 | hCoV-19/Nepal/NPHL-S-2421/2023 | T | 799 | insH | 1 | 20230312 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | T | 799 | E | 1 | 20210807 |
| EPI_ISL_18455256 | NSP3 | hCoV-19/env/Ukraine/80235/2023 | T | 799 | N | 6 | 20230814 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | T | 799 | V | 6 | 20220818 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | T | 799 | H | 12 | 20221213 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | T | 799 | insSstopWFN | 1 | 20210726 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | T | 799 | G | 1 | 20210803 |
| EPI_ISL_1598769 | NSP3 | hCoV-19/Switzerland/SH-ETHZ-550623/2020 | T | 799 | insCstopG | 1 | 20201209 |
| EPI_ISL_2223429 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-40257/2020 | T | 799 | insLstopstopHSTCstopG | 1 | 20200804 |
| EPI_ISL_11348104 | NSP3 | hCoV-19/Belarus/VI-CRIE-7735755457/2021 | T | 799 | P | 2 | 20211227 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | T | 799 | L | 2 | 20210813 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | T | 799 | F | 1 | 20220602 |
| EPI_ISL_13510118 | NSP3 | hCoV-19/USA/NY-CDC-QDX37841897/2022 | T | 799 | K | 6 | 20220608 |
| EPI_ISL_3922800 | NSP3 | hCoV-19/USA/ID-IBL-636268/2020 | T | 799 | insSstopFTstopRstopNILC | 1 | 20200729 |
| EPI_ISL_19775851 | NSP3 | hCoV-19/USA/CO-CDPHE-43093631/2025 | T | 799 | I | 445 | 20250222 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | T | 799 | S | 6 | 20230217 |
| EPI_ISL_861438 | NSP3 | hCoV-19/USA/OH-JML-COHDEC25/2020 | T | 799 | insFstopC | 1 | 20201231 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | F | 800 | insstopCF | 1 | 20221224 |
| EPI_ISL_16221098 | NSP3 | hCoV-19/Germany/NI-RKI-I-1069550/2022 | F | 800 | C | 16 | 20221210 |
| EPI_ISL_5437282 | NSP3 | hCoV-19/Sweden/UUH-000199972523/2021 | F | 800 | insILC | 1 | 20210506 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | F | 800 | G | 1 | 20231218 |
| EPI_ISL_18672031 | NSP3 | hCoV-19/Henan/KFCDC036/2023 | F | 800 | S | 30 | 20231118 |
| EPI_ISL_19770996 | NSP3 | hCoV-19/USA/MN-MDH-46400/2025 | F | 800 | L | 293 | 20250225 |
| EPI_ISL_19499451 | NSP3 | hCoV-19/USA/TX-HMH-M-146056/2024 | F | 800 | V | 18 | 20240904 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | F | 800 | T | 5 | 20220623 |
| EPI_ISL_5380351 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-62239/2021 | F | 800 | insC | 1 | 20210907 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | F | 800 | K | 2 | 20220818 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | F | 800 | Y | 17 | 20240904 |
| EPI_ISL_19366166 | NSP3 | hCoV-19/USA/TX-HMH-M-144825/2024 | F | 800 | del | 51 | 20240810 |
| EPI_ISL_13270324 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-99129/2022 | F | 800 | H | 5 | 20220531 |
| EPI_ISL_15783596 | NSP3 | hCoV-19/USA/ID-IBL-862923/2022 | F | 800 | I | 12 | 20221101 |
| EPI_ISL_18743563 | NSP3 | hCoV-19/USA/TX-HMH-M-136485/2023 | F | 800 | stop | 25 | 20231217 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | F | 800 | W | 1 | 20220321 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 800 | E | 1 | 20210318 |
| EPI_ISL_15724763 | NSP3 | hCoV-19/Turkey/KSS-PCTSH4872188237/2022 | Y | 801 | C | 12 | 20221101 |
| EPI_ISL_12582757 | NSP3 | hCoV-19/Turkey/HSGM-GS2109/2022 | Y | 801 | S | 2 | 20220401 |
| EPI_ISL_18393179 | NSP3 | hCoV-19/Spain/MC-HCUVA-89137522/2023 | Y | 801 | N | 161 | 20230905 |
| EPI_ISL_3922905 | NSP3 | hCoV-19/USA/ID-IBL-749252/2021 | Y | 801 | insCFTstopstopstopHSTCstopGFstop | 1 | 20210814 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | Y | 801 | V | 2 | 20220623 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 801 | A | 1 | 20220210 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | Y | 801 | insstopMGRstopQLLSCH | 1 | 20210726 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | Y | 801 | E | 1 | 20210327 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | Y | 801 | K | 2 | 20220812 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | Y | 801 | R | 2 | 20220222 |
| EPI_ISL_14392438 | NSP3 | hCoV-19/Finland/VI-7856/2022 | Y | 801 | D | 1 | 20220719 |
| EPI_ISL_14881050 | NSP3 | hCoV-19/USA/ID-IBL-845683/2022 | Y | 801 | M | 9 | 20220812 |
| EPI_ISL_18424410 | NSP3 | hCoV-19/USA/CA-HLX-STM-AWPE2EFEZ/2023 | Y | 801 | F | 102 | 20231009 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Y | 801 | del | 36 | 20240904 |
| EPI_ISL_15783596 | NSP3 | hCoV-19/USA/ID-IBL-862923/2022 | Y | 801 | L | 17 | 20221101 |
| EPI_ISL_13113222 | NSP3 | hCoV-19/Turkey/HSGM-IST-01767/2022 | Y | 801 | Q | 2 | 20220525 |
| EPI_ISL_7660338 | NSP3 | hCoV-19/Sweden/UUH-000200251290N2/2021 | Y | 801 | T | 3 | 20211202 |
| EPI_ISL_19784266 | NSP3 | hCoV-19/USA/VA-GBW-GKPLAAAA56833/2025 | Y | 801 | H | 88 | 20250303 |
| EPI_ISL_19334630 | NSP3 | hCoV-19/Egypt/CPHL-EGY24151/2024 | Y | 801 | stop | 66 | 20240623 |
| EPI_ISL_17789999 | NSP3 | hCoV-19/USA/CA-CCPHL-5038/2023 | V | 802 | F | 25 | 20230521 |
| EPI_ISL_19785810 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147897/2025 | V | 802 | G | 456 | 20250304 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 802 | Q | 2 | 20220210 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | V | 802 | M | 3 | 20221003 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | V | 802 | del | 41 | 20240904 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | V | 802 | Y | 1 | 20221230 |
| EPI_ISL_15041518 | NSP3 | hCoV-19/France/IDF-AphpSA-GL000888/2022 | V | 802 | S | 6 | 20220829 |
| EPI_ISL_19797356 | NSP3 | hCoV-19/Finland/THL-01456/2025 | V | 802 | A | 62 | 20250206 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | V | 802 | T | 6 | 20220818 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | V | 802 | P | 6 | 20230404 |
| EPI_ISL_18115495 | NSP3 | hCoV-19/Thailand/NIC_BKK_7020/2023 | V | 802 | C | 13 | 20230707 |
| EPI_ISL_19425782 | NSP3 | hCoV-19/USA/TX-HMH-M-145321/2024 | V | 802 | L | 121 | 20240820 |
| EPI_ISL_19780252 | NSP3 | hCoV-19/Japan/MPHERI-FR024-0207/2024 | V | 802 | I | 365 | 20241003 |
| EPI_ISL_5054148 | NSP3 | hCoV-19/Senegal/cTE BM 0259/2020 | V | 802 | insXAJRCstopG | 1 | 20200626 |
| EPI_ISL_1415218 | NSP3 | hCoV-19/India/MH-NCCS-JJ/2021 | V | 802 | stop | 1 | 20210220 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | V | 802 | E | 2 | 20220823 |
| EPI_ISL_17984372 | NSP3 | hCoV-19/South Korea/KDCA249620/2023 | L | 803 | S | 40 | 20230623 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | L | 803 | N | 3 | 20231218 |
| EPI_ISL_19727629 | NSP3 | hCoV-19/USA/IL-RIPHL_15225_G/2025 | L | 803 | J | 2 | 20250117 |
| EPI_ISL_19425782 | NSP3 | hCoV-19/USA/TX-HMH-M-145321/2024 | L | 803 | M | 107 | 20240820 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | L | 803 | D | 6 | 20230404 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | L | 803 | R | 2 | 20220823 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | L | 803 | V | 8 | 20221224 |
| EPI_ISL_19366166 | NSP3 | hCoV-19/USA/TX-HMH-M-144825/2024 | L | 803 | del | 49 | 20240810 |
| EPI_ISL_1178755 | NSP3 | hCoV-19/England/OXON-F688D2/2021 | L | 803 | Q | 1 | 20210203 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | L | 803 | P | 2 | 20211222 |
| EPI_ISL_5380351 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-62239/2021 | L | 803 | stop | 3 | 20210907 |
| EPI_ISL_8147205 | NSP3 | hCoV-19/Sweden/UUH-500000079195SP/2021 | L | 803 | insT | 1 | 20211216 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | L | 803 | A | 1 | 20210915 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | L | 803 | K | 2 | 20221003 |
| EPI_ISL_18115495 | NSP3 | hCoV-19/Thailand/NIC_BKK_7020/2023 | L | 803 | F | 12 | 20230707 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | L | 803 | I | 8 | 20220927 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | L | 803 | Y | 7 | 20230217 |
| EPI_ISL_10082615 | NSP3 | hCoV-19/USA/ID-IBL-789742/2022 | L | 803 | insCF | 1 | 20220126 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | L | 803 | T | 2 | 20221230 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | P | 804 | A | 3 | 20230217 |
| EPI_ISL_15041518 | NSP3 | hCoV-19/France/IDF-AphpSA-GL000888/2022 | P | 804 | R | 6 | 20220829 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | P | 804 | K | 3 | 20220812 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | P | 804 | D | 3 | 20240904 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | P | 804 | stop | 4 | 20220519 |
| EPI_ISL_19585516 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09087/2024 | P | 804 | H | 17 | 20241031 |
| EPI_ISL_19064079 | NSP3 | hCoV-19/Brazil/MG-FUNED-312016459/2024 | P | 804 | L | 85 | 20240229 |
| EPI_ISL_19801226 | NSP3 | hCoV-19/USA/CA-SEARCH-142871/2024 | P | 804 | S | 431 | 20241214 |
| EPI_ISL_19425782 | NSP3 | hCoV-19/USA/TX-HMH-M-145321/2024 | P | 804 | M | 98 | 20240820 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | P | 804 | F | 1 | 20210805 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | P | 804 | C | 1 | 20221122 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | P | 804 | V | 5 | 20221003 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | P | 804 | N | 1 | 20220818 |
| EPI_ISL_19366166 | NSP3 | hCoV-19/USA/TX-HMH-M-144825/2024 | P | 804 | del | 77 | 20240810 |
| EPI_ISL_19375128 | NSP3 | hCoV-19/Canada/ON-KHS-04107-v1/2024 | P | 804 | T | 44 | 20240827 |
| EPI_ISL_14881063 | NSP3 | hCoV-19/USA/ID-IBL-846239/2022 | P | 804 | I | 6 | 20220816 |
| EPI_ISL_13175998 | NSP3 | hCoV-19/Turkey/HSGM-IST-01317/2022 | P | 804 | Y | 2 | 20220520 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | N | 805 | L | 3 | 20220818 |
| EPI_ISL_17502664 | NSP3 | hCoV-19/USA/NY-MVL349220747/2022 | N | 805 | Y | 23 | 20221215 |
| EPI_ISL_19366166 | NSP3 | hCoV-19/USA/TX-HMH-M-144825/2024 | N | 805 | del | 86 | 20240810 |
| EPI_ISL_18602586 | NSP3 | hCoV-19/USA/CT-CDC-QDX88031262/2023 | N | 805 | D | 40 | 20231123 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | N | 805 | W | 1 | 20210622 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | N | 805 | M | 3 | 20221213 |
| EPI_ISL_19674201 | NSP3 | hCoV-19/Australia/QLD0x015029/2024 | N | 805 | S | 181 | 20241223 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | N | 805 | A | 1 | 20210805 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | N | 805 | F | 3 | 20221122 |
| EPI_ISL_19385051 | NSP3 | hCoV-19/Hubei/HCDC-XN6415/2024 | N | 805 | K | 51 | 20240805 |
| EPI_ISL_18982146 | NSP3 | hCoV-19/USA/IL-RIPHL_122761_G/2024 | N | 805 | B | 5 | 20240215 |
| EPI_ISL_19667077 | NSP3 | hCoV-19/Denmark/DCGC-691419/2024 | N | 805 | T | 204 | 20241209 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | N | 805 | H | 72 | 20221130 |
| EPI_ISL_18115495 | NSP3 | hCoV-19/Thailand/NIC_BKK_7020/2023 | N | 805 | stop | 7 | 20230707 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | N | 805 | R | 1 | 20220723 |
| EPI_ISL_10951140 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9174/2022 | N | 805 | Q | 2 | 20220210 |
| EPI_ISL_15041518 | NSP3 | hCoV-19/France/IDF-AphpSA-GL000888/2022 | N | 805 | E | 6 | 20220829 |
| EPI_ISL_19268261 | NSP3 | hCoV-19/Singapore/R42MQ46/2024 | N | 805 | I | 21 | 20240707 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | N | 805 | insXXC | 1 | 20200626 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | N | 805 | G | 3 | 20240904 |
| EPI_ISL_13812270 | NSP3 | hCoV-19/USA/ID-IBL-831535/2022 | D | 806 | stop | 4 | 20220624 |
| EPI_ISL_19800025 | NSP3 | hCoV-19/USA/TX-HMH-M-147381/2025 | D | 806 | B | 11 | 20250129 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | D | 806 | P | 1 | 20221230 |
| EPI_ISL_19819772 | NSP3 | hCoV-19/England/CLIMB-CM7YRT8K/2025 | D | 806 | G | 799 | 20250310 |
| EPI_ISL_19425782 | NSP3 | hCoV-19/USA/TX-HMH-M-145321/2024 | D | 806 | L | 92 | 20240820 |
| EPI_ISL_16814850 | NSP3 | hCoV-19/Spain/AS-232304007/2023 | D | 806 | Y | 25 | 20230124 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | D | 806 | F | 1 | 20200803 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | D | 806 | S | 3 | 20210719 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | D | 806 | T | 3 | 20221122 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | D | 806 | R | 1 | 20220818 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | D | 806 | N | 77 | 20221130 |
| EPI_ISL_19366166 | NSP3 | hCoV-19/USA/TX-HMH-M-144825/2024 | D | 806 | del | 157 | 20240810 |
| EPI_ISL_14333800 | NSP3 | hCoV-19/USA/ID-IBL-839955/2022 | D | 806 | insL | 1 | 20220726 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | D | 806 | A | 125 | 20240904 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | D | 806 | I | 6 | 20221003 |
| EPI_ISL_19760226 | NSP3 | hCoV-19/USA/MD-CDC-LC1133553/2025 | D | 806 | E | 143 | 20250215 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | D | 806 | C | 2 | 20210813 |
| EPI_ISL_17408260 | NSP3 | hCoV-19/Germany/SH-RKI-I-1129791/2023 | D | 806 | H | 7 | 20230306 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | D | 806 | M | 2 | 20210622 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | D | 806 | V | 13 | 20240307 |
| EPI_ISL_19259827 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA11051-P0/2024 | D | 807 | N | 219 | 20240531 |
| EPI_ISL_18077544 | NSP3 | hCoV-19/Japan/PG-553367/2023 | D | 807 | insD | 1 | 20230728 |
| EPI_ISL_19745824 | NSP3 | hCoV-19/USA/NY-SUNYQB-X1251122/2025 | D | 807 | G | 227 | 20250113 |
| EPI_ISL_19817955 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U862-1/2025 | D | 807 | Y | 713 | 20250316 |
| EPI_ISL_16676346 | NSP3 | hCoV-19/Singapore/R5MR47/2023 | D | 807 | B | 6 | 20230112 |
| EPI_ISL_15457442 | NSP3 | hCoV-19/Sweden/03_SE600_500000153621SP/2022 | D | 807 | insXX | 1 | 20220120 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | D | 807 | insstopstop | 1 | 20210805 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | D | 807 | Q | 3 | 20220602 |
| EPI_ISL_19804919 | NSP3 | hCoV-19/USA/AK-USAFSAM-S23547/2025 | D | 807 | A | 87 | 20250211 |
| EPI_ISL_13812285 | NSP3 | hCoV-19/USA/ID-IBL-831832/2022 | D | 807 | S | 3 | 20220624 |
| EPI_ISL_16049837 | NSP3 | hCoV-19/USA/ID-IBL-864429/2022 | D | 807 | I | 6 | 20221110 |
| EPI_ISL_19215525 | NSP3 | hCoV-19/Kuwait/Jaber20063250/2024 | D | 807 | del | 250 | 20240306 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | D | 807 | K | 1 | 20240307 |
| EPI_ISL_19757081 | NSP3 | hCoV-19/Sweden/F-91670697MD/2025 | D | 807 | H | 13 | 20250125 |
| EPI_ISL_13068993 | NSP3 | hCoV-19/Brazil/BA-LACEN-BA1243-292215719/2022 | D | 807 | M | 2 | 20220131 |
| EPI_ISL_1415218 | NSP3 | hCoV-19/India/MH-NCCS-JJ/2021 | D | 807 | T | 1 | 20210220 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | D | 807 | stop | 69 | 20221130 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | D | 807 | L | 3 | 20221003 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | D | 807 | P | 3 | 20210726 |
| EPI_ISL_19607073 | NSP3 | hCoV-19/Australia/TAS008591/2024 | D | 807 | E | 1533 | 20241119 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | D | 807 | V | 17 | 20240123 |
| EPI_ISL_15041518 | NSP3 | hCoV-19/France/IDF-AphpSA-GL000888/2022 | D | 807 | R | 6 | 20220829 |
| EPI_ISL_19784258 | NSP3 | hCoV-19/USA/FL-GBW-GKPLAAAA25283/2025 | T | 808 | A | 167 | 20250303 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | T | 808 | P | 18 | 20240307 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | T | 808 | del | 81 | 20231013 |
| EPI_ISL_935065 | NSP3 | hCoV-19/Turkey/HSGM-1318/2021 | T | 808 | insHDT | 2 | 20210119 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | T | 808 | insstopF | 1 | 20221130 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | T | 808 | L | 9 | 20221024 |
| EPI_ISL_19819492 | NSP3 | hCoV-19/Taiwan/CDC-W42120/2025 | T | 808 | I | 1624 | 20250331 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | T | 808 | C | 2 | 20221003 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 808 | F | 4 | 20220812 |
| EPI_ISL_5070922 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46980/2021 | T | 808 | M | 1 | 20210526 |
| EPI_ISL_18098346 | NSP3 | hCoV-19/Kenya/KNPHLGEN092/2021 | T | 808 | Y | 1 | 20211214 |
| EPI_ISL_19753276 | NSP3 | hCoV-19/USA/CA-PFZ04462/2025 | T | 808 | S | 90 | 20250205 |
| EPI_ISL_12934369 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1589/2022 | T | 808 | H | 4 | 20220119 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | T | 808 | V | 93 | 20240904 |
| EPI_ISL_19621586 | NSP3 | hCoV-19/France/OCC-RELAB-HCL724000635201/2024 | T | 808 | N | 274 | 20241127 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | L | 809 | Q | 52 | 20240123 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | L | 809 | stop | 15 | 20220531 |
| EPI_ISL_19710625 | NSP3 | hCoV-19/Canada/ON-KHS-06181-v1/2024 | L | 809 | I | 123 | 20241224 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | L | 809 | E | 1 | 20210424 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | L | 809 | F | 2 | 20221003 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | L | 809 | Y | 2 | 20210815 |
| EPI_ISL_13812285 | NSP3 | hCoV-19/USA/ID-IBL-831832/2022 | L | 809 | C | 1 | 20220624 |
| EPI_ISL_19452537 | NSP3 | hCoV-19/USA/NY-CDC-LC1121802/2024 | L | 809 | P | 82 | 20240912 |
| EPI_ISL_17172715 | NSP3 | hCoV-19/Japan/TKYmbc36325/2023 | L | 809 | V | 25 | 20230210 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | L | 809 | insTstopstopYS | 1 | 20221003 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | L | 809 | del | 130 | 20231013 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | L | 809 | M | 5 | 20221024 |
| EPI_ISL_10678705 | NSP3 | hCoV-19/Turkey/HSGM-G1514/2022 | L | 809 | S | 5 | 20220214 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | L | 809 | N | 1 | 20210726 |
| EPI_ISL_18787671 | NSP3 | hCoV-19/Canada/AB-ABPHL-112472/2024 | L | 809 | J | 21 | 20240104 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 809 | T | 6 | 20240904 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | L | 809 | H | 2 | 20210804 |
| EPI_ISL_14298942 | NSP3 | hCoV-19/Turkey/HSGM-IST-03785/2022 | L | 809 | R | 3 | 20220702 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | R | 810 | K | 9 | 20240904 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | R | 810 | D | 3 | 20210804 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | R | 810 | insENstopG | 1 | 20220818 |
| EPI_ISL_19558504 | NSP3 | hCoV-19/Sichuan/ZYCDC-XG0408/2024 | R | 810 | H | 1148 | 20241024 |
| EPI_ISL_18356473 | NSP3 | hCoV-19/Spain/PV-HUD-35176994/2023 | R | 810 | N | 1 | 20230924 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | R | 810 | Y | 20 | 20230330 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | R | 810 | I | 3 | 20221024 |
| EPI_ISL_10045282 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-345006/2022 | R | 810 | Q | 1 | 20220208 |
| EPI_ISL_19376405 | NSP3 | hCoV-19/USA/CO-CDPHE-42169726/2024 | R | 810 | S | 141 | 20240724 |
| EPI_ISL_19218575 | NSP3 | hCoV-19/Slovenia/IMI-V1-6726/2024 | R | 810 | L | 770 | 20240604 |
| EPI_ISL_19195441 | NSP3 | hCoV-19/USA/TN-SPHL-1667/2024 | R | 810 | W | 1 | 20240114 |
| EPI_ISL_13812285 | NSP3 | hCoV-19/USA/ID-IBL-831832/2022 | R | 810 | stop | 2 | 20220624 |
| EPI_ISL_11326419 | NSP3 | hCoV-19/France/IDF-ChVe-21465903/2021 | R | 810 | V | 2 | 20211120 |
| EPI_ISL_19825961 | NSP3 | hCoV-19/Singapore/Y25R15MSC87/2025 | R | 810 | C | 3333 | 20250403 |
| EPI_ISL_19390947 | NSP3 | hCoV-19/Puerto Rico/CVL025806/2024 | R | 810 | G | 138 | 20240729 |
| EPI_ISL_14881063 | NSP3 | hCoV-19/USA/ID-IBL-846239/2022 | R | 810 | T | 9 | 20220816 |
| EPI_ISL_15720444 | NSP3 | hCoV-19/Spain/AS-252282394/2022 | R | 810 | M | 1 | 20221017 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | R | 810 | del | 129 | 20231013 |
| EPI_ISL_17021614 | NSP3 | hCoV-19/USA/CA-CDPH-6000014027/2022 | R | 810 | P | 4 | 20221128 |
| EPI_ISL_19541507 | NSP3 | hCoV-19/USA/VA-CDC-LC1125095/2024 | V | 811 | G | 21 | 20241031 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | V | 811 | K | 3 | 20210327 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | V | 811 | M | 3 | 20221130 |
| EPI_ISL_19796293 | NSP3 | hCoV-19/Australia/SA2469927/2025 | V | 811 | F | 537 | 20250301 |
| EPI_ISL_19769266 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422246027/2025 | V | 811 | L | 108 | 20250106 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | V | 811 | T | 3 | 20240123 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | V | 811 | R | 1 | 20220509 |
| EPI_ISL_19488820 | NSP3 | hCoV-19/USA/NY-GBW-GKPLAAAA29982/2024 | V | 811 | A | 292 | 20241008 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | V | 811 | Y | 1 | 20220823 |
| EPI_ISL_15310344 | NSP3 | hCoV-19/Mexico/YUC_CIAD-IMSS_202201018404/2022 | V | 811 | D | 5 | 20220921 |
| EPI_ISL_19782800 | NSP3 | hCoV-19/Chile/AR-ISPC-19527/2025 | V | 811 | I | 1109 | 20250301 |
| EPI_ISL_14881063 | NSP3 | hCoV-19/USA/ID-IBL-846239/2022 | V | 811 | C | 7 | 20220816 |
| EPI_ISL_2245836 | NSP3 | hCoV-19/Guinea/Conakry_IPG12953/2020 | V | 811 | insF | 1 | 20201010 |
| EPI_ISL_13576088 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-10629/2022 | V | 811 | P | 5 | 20220611 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | V | 811 | del | 127 | 20231218 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | E | 812 | L | 21 | 20230401 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | E | 812 | K | 12 | 20240904 |
| EPI_ISL_19504084 | NSP3 | hCoV-19/Canada/AB-ABPHL-124181/2024 | E | 812 | V | 8 | 20240923 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | E | 812 | del | 166 | 20231218 |
| EPI_ISL_19499039 | NSP3 | hCoV-19/USA/TX-HMH-M-146416/2024 | E | 812 | stop | 15 | 20240919 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | E | 812 | R | 19 | 20240322 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | E | 812 | S | 3 | 20221130 |
| EPI_ISL_14881077 | NSP3 | hCoV-19/USA/ID-IBL-847392/2022 | E | 812 | Y | 3 | 20220822 |
| EPI_ISL_11326419 | NSP3 | hCoV-19/France/IDF-ChVe-21465903/2021 | E | 812 | P | 1 | 20211120 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | E | 812 | T | 5 | 20240123 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | E | 812 | H | 1 | 20210414 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | E | 812 | G | 4 | 20220509 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | E | 812 | insstopstopstopHSTCstop | 1 | 20210915 |
| EPI_ISL_18356473 | NSP3 | hCoV-19/Spain/PV-HUD-35176994/2023 | E | 812 | Q | 14 | 20230924 |
| EPI_ISL_19816726 | NSP3 | hCoV-19/Australia/WA16890/2025 | E | 812 | D | 372 | 20250320 |
| EPI_ISL_15808155 | NSP3 | hCoV-19/Australia/NSW-SAVID-14740/2022 | E | 812 | Z | 4 | 20221110 |
| EPI_ISL_3299463 | NSP3 | hCoV-19/Sweden/UUH-000199860579N2/2021 | E | 812 | insCstop | 1 | 20210428 |
| EPI_ISL_13576088 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-10629/2022 | E | 812 | N | 2 | 20220611 |
| EPI_ISL_19677401 | NSP3 | hCoV-19/Philippines/PH-RITM-4900/2024 | A | 813 | S | 279 | 20241129 |
| EPI_ISL_9261061 | NSP3 | hCoV-19/USA/AZ-TG1093530/2021 | A | 813 | R | 3 | 20211025 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 813 | Q | 1 | 20220210 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | A | 813 | L | 12 | 20240322 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | A | 813 | del | 164 | 20231218 |
| EPI_ISL_14881063 | NSP3 | hCoV-19/USA/ID-IBL-846239/2022 | A | 813 | G | 29 | 20220816 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | A | 813 | D | 2 | 20220509 |
| EPI_ISL_19614743 | NSP3 | hCoV-19/Russia/BA-RII-MH207001S/2024 | A | 813 | T | 206 | 20241016 |
| EPI_ISL_10523144 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-9810/2022 | A | 813 | F | 1 | 20220208 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | A | 813 | stop | 2 | 20220818 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 813 | I | 1 | 20210318 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | A | 813 | K | 4 | 20240123 |
| EPI_ISL_1909121 | NSP3 | hCoV-19/Morocco/FMP-272/2021 | A | 813 | H | 1 | 20210422 |
| EPI_ISL_19780402 | NSP3 | hCoV-19/USA/NY-PRL-250311_81F04/2025 | A | 813 | V | 2506 | 20250301 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 813 | P | 4 | 20240904 |
| EPI_ISL_15377043 | NSP3 | hCoV-19/USA/ID-IBL-857476/2022 | A | 813 | C | 6 | 20220927 |
| EPI_ISL_19452459 | NSP3 | hCoV-19/USA/NJ-CDC-LC1121926/2024 | F | 814 | S | 136 | 20240911 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | F | 814 | M | 1 | 20200626 |
| EPI_ISL_19572893 | NSP3 | hCoV-19/France/GES-RELAB-IPP12747/2024 | F | 814 | V | 65 | 20241104 |
| EPI_ISL_18415832 | NSP3 | hCoV-19/Mexico/CMX-INER-IBT-2627/2023 | F | 814 | I | 46 | 20230713 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | F | 814 | H | 2 | 20240904 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | F | 814 | stop | 5 | 20221122 |
| EPI_ISL_12829307 | NSP3 | hCoV-19/Italy/LOM-IRCCS-22_01062824/2022 | F | 814 | C | 5 | 20220404 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | F | 814 | G | 11 | 20220620 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | F | 814 | K | 1 | 20220509 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | F | 814 | del | 165 | 20231218 |
| EPI_ISL_19212606 | NSP3 | hCoV-19/env/India/MH-NCL-245-02/2024 | F | 814 | insP | 1 | 20240102 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | F | 814 | T | 2 | 20210327 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | F | 814 | Q | 1 | 20220818 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | F | 814 | insstopHTXYV | 1 | 20200626 |
| EPI_ISL_19506609 | NSP3 | hCoV-19/Italy/LOM_Unimi-4749-24/2024 | F | 814 | Y | 22 | 20241005 |
| EPI_ISL_19703903 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09930/2025 | F | 814 | L | 766 | 20250106 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | F | 814 | N | 2 | 20210622 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | E | 815 | stop | 16 | 20221228 |
| EPI_ISL_19823501 | NSP3 | hCoV-19/Italy/LAZ-IFO-2504013050/2025 | E | 815 | D | 26089 | 20250317 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | E | 815 | L | 4 | 20211222 |
| EPI_ISL_19463579 | NSP3 | hCoV-19/USA/UT-UPHL-241004959427/2024 | E | 815 | V | 65 | 20240926 |
| EPI_ISL_17624839 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200346262N2/2022 | E | 815 | insXXXXX | 1 | 20220203 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | E | 815 | R | 29 | 20230330 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | E | 815 | N | 4 | 20240904 |
| EPI_ISL_12319890 | NSP3 | hCoV-19/Turkey/HSGM-GS1843/2022 | E | 815 | W | 3 | 20220401 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | E | 815 | Z | 4 | 20240105 |
| EPI_ISL_16349470 | NSP3 | hCoV-19/Denmark/DCGC-630171/2022 | E | 815 | Q | 3 | 20221219 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | E | 815 | H | 1 | 20220818 |
| EPI_ISL_19735488 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56307/2025 | E | 815 | G | 698 | 20250205 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | E | 815 | M | 3 | 20220628 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | E | 815 | S | 38 | 20240322 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | E | 815 | Y | 88 | 20221024 |
| EPI_ISL_19623011 | NSP3 | hCoV-19/New Zealand/24YA7691/2024 | E | 815 | A | 124 | 20241126 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 815 | P | 1 | 20210318 |
| EPI_ISL_19729119 | NSP3 | hCoV-19/Singapore/Y25R7MSC36/2025 | E | 815 | K | 360 | 20250207 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | E | 815 | F | 1 | 20240123 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | E | 815 | del | 148 | 20231218 |
| EPI_ISL_8318269 | NSP3 | hCoV-19/USA/ID-IBL-778497/2021 | Y | 816 | Q | 1 | 20211122 |
| EPI_ISL_14392438 | NSP3 | hCoV-19/Finland/VI-7856/2022 | Y | 816 | N | 4 | 20220719 |
| EPI_ISL_18237865 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000125623SP/2022 | Y | 816 | insXXX | 1 | 20221201 |
| EPI_ISL_18680893 | NSP3 | hCoV-19/Denmark/DCGC-667283/2023 | Y | 816 | S | 39 | 20231127 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | Y | 816 | E | 1 | 20211222 |
| EPI_ISL_1356616 | NSP3 | hCoV-19/Germany/NW-RKI-I-049190/2021 | Y | 816 | P | 1 | 20210324 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | Y | 816 | R | 2 | 20220823 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Y | 816 | V | 12 | 20220509 |
| EPI_ISL_19364363 | NSP3 | hCoV-19/Germany/BE-RKI-I-1144728/2024 | Y | 816 | C | 73 | 20240806 |
| EPI_ISL_12291250 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0981/2022 | Y | 816 | I | 3 | 20220121 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | Y | 816 | T | 8 | 20221122 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | Y | 816 | F | 11 | 20230217 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Y | 816 | del | 192 | 20240904 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | Y | 816 | L | 27 | 20230330 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | Y | 816 | stop | 5 | 20220818 |
| EPI_ISL_4311787 | NSP3 | hCoV-19/England/PHEC-Z304ZC8D/2021 | Y | 816 | D | 1 | 20210909 |
| EPI_ISL_19635350 | NSP3 | hCoV-19/USA/CO-CDPHE-42590897/2024 | Y | 816 | H | 233 | 20241215 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | Y | 817 | R | 2 | 20220823 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | Y | 817 | T | 8 | 20221003 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | Y | 817 | L | 61 | 20230330 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 817 | E | 1 | 20210318 |
| EPI_ISL_12146045 | NSP3 | hCoV-19/Turkey/HSGM-GS1422/2022 | Y | 817 | S | 3 | 20220401 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Y | 817 | G | 1 | 20240123 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Y | 817 | del | 162 | 20240904 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | Y | 817 | N | 2 | 20221217 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | Y | 817 | C | 7 | 20230217 |
| EPI_ISL_12146055 | NSP3 | hCoV-19/Turkey/HSGM-GS1707/2022 | Y | 817 | Q | 2 | 20220401 |
| EPI_ISL_14333929 | NSP3 | hCoV-19/env/Austria/CeMM32782/2022 | Y | 817 | stop | 8 | 20220719 |
| EPI_ISL_19683043 | NSP3 | hCoV-19/USA/NY-CDC-QDX29101890/2025 | Y | 817 | F | 21 | 20250107 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | Y | 817 | insCFTstopstopstop | 1 | 20210807 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | Y | 817 | P | 1 | 20210812 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | Y | 817 | I | 2 | 20221024 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | Y | 817 | W | 6 | 20220321 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | Y | 817 | insstopstopstop | 1 | 20210803 |
| EPI_ISL_19463634 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-026970/2024 | Y | 817 | H | 84 | 20240907 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | Y | 817 | K | 5 | 20230404 |
| EPI_ISL_12291250 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0981/2022 | Y | 817 | D | 2 | 20220121 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 817 | V | 2 | 20220210 |
| EPI_ISL_19413503 | NSP3 | hCoV-19/Netherlands/NH-RIVM-141262/2024 | H | 818 | Q | 3547 | 20240821 |
| EPI_ISL_19785432 | NSP3 | hCoV-19/Japan/FR302-0181/2025 | H | 818 | Y | 844 | 20250206 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | H | 818 | del | 166 | 20240904 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | H | 818 | insSTCstopELLSTT | 1 | 20210803 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | H | 818 | S | 52 | 20230330 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | H | 818 | T | 17 | 20230401 |
| EPI_ISL_17547994 | NSP3 | hCoV-19/Austria/AGES-1135018/2023 | H | 818 | D | 20 | 20230417 |
| EPI_ISL_19384523 | NSP3 | hCoV-19/Hubei/HCDC-HG6762/2024 | H | 818 | N | 85 | 20240823 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | H | 818 | G | 1 | 20240123 |
| EPI_ISL_19527002 | NSP3 | hCoV-19/Thailand/CU-AMV158/2024 | H | 818 | R | 39 | 20240715 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | H | 818 | V | 1 | 20210318 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | H | 818 | L | 1 | 20211222 |
| EPI_ISL_17557412 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3090/2023 | H | 818 | P | 9 | 20230408 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | H | 818 | I | 1 | 20210327 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | H | 818 | C | 1 | 20210403 |
| EPI_ISL_12291367 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1100/2022 | T | 819 | F | 1 | 20220114 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | T | 819 | Q | 3 | 20220604 |
| EPI_ISL_19823589 | NSP3 | hCoV-19/Croatia/HZJZ_8689/2025 | T | 819 | I | 10286 | 20250321 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | T | 819 | N | 3 | 20221003 |
| EPI_ISL_17546515 | NSP3 | hCoV-19/USA/ID-IBL-881659/2023 | T | 819 | Y | 5 | 20230404 |
| EPI_ISL_5441243 | NSP3 | hCoV-19/USA/ID-IBL-758886/2021 | T | 819 | insQ | 1 | 20210918 |
| EPI_ISL_13829365 | NSP3 | hCoV-19/USA/ID-IBL-832954/2022 | T | 819 | C | 2 | 20220629 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | T | 819 | H | 8 | 20220131 |
| EPI_ISL_16047627 | NSP3 | hCoV-19/USA/CA-CDC-LC0942302/2022 | T | 819 | S | 12 | 20221122 |
| EPI_ISL_19550729 | NSP3 | hCoV-19/England/CLIMB-CM7Y8M6N/2024 | T | 819 | A | 281 | 20241004 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 819 | K | 11 | 20240123 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | T | 819 | V | 6 | 20220804 |
| EPI_ISL_8147150 | NSP3 | hCoV-19/Sweden/UUH-500000070001SP/2021 | T | 819 | P | 9 | 20211216 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | T | 819 | del | 116 | 20240904 |
| EPI_ISL_15420325 | NSP3 | hCoV-19/Spain/CL-COV36523/2022 | T | 819 | M | 2 | 20220906 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | T | 819 | stop | 2 | 20221122 |
| EPI_ISL_13044538 | NSP3 | hCoV-19/USA/ID-IBL-821511/2022 | T | 819 | L | 1 | 20220519 |
| EPI_ISL_19828130 | NSP3 | hCoV-19/Australia/QLD0x0154D4/2025 | T | 820 | I | 5357 | 20250327 |
| EPI_ISL_13044538 | NSP3 | hCoV-19/USA/ID-IBL-821511/2022 | T | 820 | R | 1 | 20220519 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | T | 820 | insCDMSIHM | 1 | 20220818 |
| EPI_ISL_15725799 | NSP3 | hCoV-19/Sweden/48795277X5/2022 | T | 820 | L | 5 | 20221010 |
| EPI_ISL_19710385 | NSP3 | hCoV-19/Netherlands/NH-RIVM-144994/2025 | T | 820 | A | 314 | 20250109 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | T | 820 | insL | 1 | 20220823 |
| EPI_ISL_16947128 | NSP3 | hCoV-19/Malaysia/IMR_CV05369/2023 | T | 820 | K | 2 | 20230116 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | T | 820 | S | 20 | 20221122 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | T | 820 | C | 1 | 20220427 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 820 | E | 1 | 20210318 |
| EPI_ISL_18987259 | NSP3 | hCoV-19/Netherlands/NB-EMC-5403/2024 | T | 820 | Y | 2 | 20240212 |
| EPI_ISL_8147150 | NSP3 | hCoV-19/Sweden/UUH-500000070001SP/2021 | T | 820 | H | 3 | 20211216 |
| EPI_ISL_19831989 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YR8FN/2025 | T | 820 | P | 405 | 20250325 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | T | 820 | F | 1 | 20220804 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | T | 820 | stop | 3 | 20221003 |
| EPI_ISL_19831932 | NSP3 | hCoV-19/England/CLIMB-CM7YGUNB/2025 | T | 820 | N | 1388 | 20250405 |
| EPI_ISL_19105055 | NSP3 | hCoV-19/USA/CA-IVY-G43R97V4/2024 | T | 820 | V | 8 | 20240228 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | T | 820 | del | 119 | 20240904 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | D | 821 | C | 2 | 20210807 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | D | 821 | T | 98 | 20240322 |
| EPI_ISL_19826033 | NSP3 | hCoV-19/Singapore/Y25R15MSC85/2025 | D | 821 | E | 126 | 20250408 |
| EPI_ISL_19758879 | NSP3 | hCoV-19/Sweden/D-04_SE100_25CS500094/2025 | D | 821 | B | 127 | 20250128 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | D | 821 | L | 2 | 20220427 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | D | 821 | insLMI | 1 | 20230401 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | D | 821 | R | 1 | 20210319 |
| EPI_ISL_19807103 | NSP3 | hCoV-19/Canada/ON-HSC-202501434-v1/2025 | D | 821 | A | 97 | 20250305 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | D | 821 | I | 3 | 20220604 |
| EPI_ISL_17631864 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200370866N2/2022 | D | 821 | insXXX | 1 | 20220310 |
| EPI_ISL_16752527 | NSP3 | hCoV-19/USA/UT-UPHL-230127991228/2023 | D | 821 | G | 12 | 20230116 |
| EPI_ISL_19636767 | NSP3 | hCoV-19/Colombia/VAC-LDSP-20241114-3091-VIG/2024 | D | 821 | H | 32 | 20240911 |
| EPI_ISL_19793803 | NSP3 | hCoV-19/Canada/AB-ABPHL-131397/2025 | D | 821 | V | 18 | 20250304 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | D | 821 | del | 119 | 20240904 |
| EPI_ISL_17786166 | NSP3 | hCoV-19/Portugal/PT48266/2023 | D | 821 | Y | 11 | 20230517 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 821 | K | 1 | 20220210 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | D | 821 | insNstop | 1 | 20210114 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | D | 821 | N | 4261 | 20250329 |
| EPI_ISL_17425924 | NSP3 | hCoV-19/India/MH-CSIR-2918/2023 | D | 821 | Q | 2 | 20230401 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | D | 821 | S | 4 | 20221122 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | D | 821 | stop | 8 | 20220131 |
| EPI_ISL_19211225 | NSP3 | hCoV-19/Brazil/TO-FIOCRUZ-7668/2024 | P | 822 | A | 21 | 20240301 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | P | 822 | stop | 5 | 20220604 |
| EPI_ISL_19817681 | NSP3 | hCoV-19/Spain/PV-HUD-71563185/2025 | P | 822 | R | 41 | 20250321 |
| EPI_ISL_19821873 | NSP3 | hCoV-19/USA/AL-CDC-LC1136375/2025 | P | 822 | H | 1446 | 20250326 |
| EPI_ISL_19829201 | NSP3 | hCoV-19/USA/NY-CDC-LC1136614/2025 | P | 822 | L | 273986 | 20250403 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | P | 822 | I | 28 | 20240123 |
| EPI_ISL_19819748 | NSP3 | hCoV-19/Singapore/Y25R14MSC98/2025 | P | 822 | S | 141531 | 20250402 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | P | 822 | del | 120 | 20240904 |
| EPI_ISL_15041518 | NSP3 | hCoV-19/France/IDF-AphpSA-GL000888/2022 | P | 822 | N | 4 | 20220829 |
| EPI_ISL_7509775 | NSP3 | hCoV-19/USA/CA-CSMC669/2020 | P | 822 | G | 1 | 20200910 |
| EPI_ISL_19133546 | NSP3 | hCoV-19/Brazil/TO-FIOCRUZ-3132/2024 | P | 822 | V | 5 | 20240207 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | P | 822 | K | 2 | 20210622 |
| EPI_ISL_2996700 | NSP3 | hCoV-19/Scotland/QEUH-182B22C/2021 | P | 822 | J | 11 | 20210701 |
| EPI_ISL_19414626 | NSP3 | hCoV-19/Brazil/RS-LGBM-HMV-01-0673-P/2024 | P | 822 | Y | 1 | 20240317 |
| EPI_ISL_19746844 | NSP3 | hCoV-19/USA/SD-SDPHL-3965/2025 | P | 822 | T | 210 | 20250131 |
| EPI_ISL_19733039 | NSP3 | hCoV-19/USA/NE-NPHL-RP251212/2025 | P | 822 | F | 305 | 20250209 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | P | 822 | Q | 98 | 20240322 |
| EPI_ISL_8147150 | NSP3 | hCoV-19/Sweden/UUH-500000070001SP/2021 | S | 823 | insstop | 1 | 20211216 |
| EPI_ISL_18065362 | NSP3 | hCoV-19/USA/MS-MSPHL-0258/2023 | S | 823 | G | 340 | 20230718 |
| EPI_ISL_18281974 | NSP3 | hCoV-19/Sweden/AC-460372765101/2023 | S | 823 | C | 2 | 20230908 |
| EPI_ISL_19020038 | NSP3 | hCoV-19/USA/NY-NYCPHL-017233/2023 | S | 823 | T | 43 | 20230724 |
| EPI_ISL_19014002 | NSP3 | hCoV-19/Japan/4141461_S19/2023 | S | 823 | R | 8 | 20231115 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | S | 823 | H | 2 | 20210622 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | S | 823 | K | 2 | 20240123 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | S | 823 | F | 1 | 20220604 |
| EPI_ISL_14881077 | NSP3 | hCoV-19/USA/ID-IBL-847392/2022 | S | 823 | insIstop | 8 | 20220822 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | S | 823 | N | 18 | 20230217 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | S | 823 | insILV | 1 | 20210805 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | S | 823 | insLST | 1 | 20220818 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | S | 823 | stop | 61 | 20220222 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | S | 823 | I | 10 | 20230217 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | S | 823 | del | 85 | 20240904 |
| EPI_ISL_19192475 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16023/2024 | S | 823 | V | 80 | 20240324 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | S | 823 | L | 99 | 20240322 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | S | 823 | A | 1 | 20220723 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | F | 824 | insKTstopstopIY | 1 | 20210327 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | F | 824 | insstopVLPQLI | 1 | 20210807 |
| EPI_ISL_11355277 | NSP3 | hCoV-19/France/GES-ChNa-990000083854/2021 | F | 824 | V | 3 | 20210814 |
| EPI_ISL_10148541 | NSP3 | hCoV-19/Finland/THL-202205940/2022 | F | 824 | C | 4 | 20220124 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | F | 824 | del | 62 | 20240904 |
| EPI_ISL_12529707 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-Mapmyg-MMG2022W009581/2022 | F | 824 | stop | 1 | 20220426 |
| EPI_ISL_14594797 | NSP3 | hCoV-19/USA/NC-CLT-011311/2022 | F | 824 | Y | 11 | 20220810 |
| EPI_ISL_3003424 | NSP3 | hCoV-19/England/OXON-F8B727/2020 | F | 824 | insFYstop | 1 | 20201125 |
| EPI_ISL_984982 | NSP3 | hCoV-19/Turkey/17_Ankara_GUMV_50104/2020 | F | 824 | insstopV | 1 | 20201118 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | F | 824 | H | 1 | 20210319 |
| EPI_ISL_19677246 | NSP3 | hCoV-19/Wales/CLIMB-CM7YGXB9/2025 | F | 824 | L | 35 | 20250106 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | F | 824 | I | 93 | 20240322 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | F | 824 | T | 1 | 20220509 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 824 | P | 1 | 20210318 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | F | 824 | S | 8 | 20220723 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | F | 824 | W | 1 | 20220823 |
| EPI_ISL_10834710 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82400/2022 | L | 825 | G | 1 | 20220116 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | L | 825 | W | 3 | 20230109 |
| EPI_ISL_12146259 | NSP3 | hCoV-19/Turkey/HSGM-GS1773/2022 | L | 825 | P | 3 | 20220401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 825 | K | 1 | 20210318 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 825 | E | 1 | 20220210 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | L | 825 | T | 4 | 20220823 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 825 | del | 72 | 20240904 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | L | 825 | C | 14 | 20240123 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | L | 825 | I | 1 | 20210403 |
| EPI_ISL_19813269 | NSP3 | hCoV-19/Japan/FR085-0008/2025 | L | 825 | Q | 190 | 20250314 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | L | 825 | V | 5 | 20220604 |
| EPI_ISL_13176024 | NSP3 | hCoV-19/Turkey/HSGM-IST-01627/2022 | L | 825 | insE | 1 | 20220525 |
| EPI_ISL_8566651 | NSP3 | hCoV-19/USA/WA-PHL-008875/2021 | L | 825 | R | 2 | 20211221 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | L | 825 | N | 1 | 20210319 |
| EPI_ISL_19792185 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YK5M9/2025 | L | 825 | M | 352 | 20250304 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | L | 825 | D | 1 | 20220818 |
| EPI_ISL_19425909 | NSP3 | hCoV-19/USA/TX-HMH-M-145450/2024 | L | 825 | S | 148 | 20240823 |
| EPI_ISL_19730527 | NSP3 | hCoV-19/Ireland/D-CS250031/2024 | L | 825 | F | 49 | 20241231 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 825 | insHLD | 1 | 20220509 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | G | 826 | K | 1 | 20240123 |
| EPI_ISL_13044534 | NSP3 | hCoV-19/USA/ID-IBL-821507/2022 | G | 826 | L | 3 | 20220519 |
| EPI_ISL_13346206 | NSP3 | hCoV-19/USA/ID-IBL-824087/2022 | G | 826 | N | 2 | 20220531 |
| EPI_ISL_13812286 | NSP3 | hCoV-19/USA/ID-IBL-831852/2022 | G | 826 | insFC | 1 | 20220606 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | G | 826 | I | 2 | 20220723 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | G | 826 | F | 2 | 20211222 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | G | 826 | V | 106 | 20240322 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | G | 826 | stop | 6 | 20230109 |
| EPI_ISL_13829382 | NSP3 | hCoV-19/USA/ID-IBL-832972/2022 | G | 826 | insFWstop | 1 | 20220629 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | G | 826 | D | 1 | 20210803 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | G | 826 | A | 15 | 20220620 |
| EPI_ISL_15681715 | NSP3 | hCoV-19/Turkey/KSS-HEEAH4845949576/2022 | G | 826 | S | 8 | 20221025 |
| EPI_ISL_11355277 | NSP3 | hCoV-19/France/GES-ChNa-990000083854/2021 | G | 826 | W | 1 | 20210814 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 826 | E | 1 | 20220210 |
| EPI_ISL_5406699 | NSP3 | hCoV-19/Sweden/UUH-000200182348/2021 | G | 826 | Q | 2 | 20210923 |
| EPI_ISL_17181350 | NSP3 | hCoV-19/USA/TX-HMH-M-126483/2023 | G | 826 | insstop | 60 | 20230227 |
| EPI_ISL_3759988 | NSP3 | hCoV-19/USA/ID-IBL-747478/2021 | G | 826 | R | 4 | 20210809 |
| EPI_ISL_19573116 | NSP3 | hCoV-19/Italy/EMR-IZSLER-346706-006-01/2024 | G | 826 | C | 155 | 20241021 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | G | 826 | del | 79 | 20240904 |
| EPI_ISL_17614849 | NSP3 | hCoV-19/USA/NJ-GBW-H20-280-9972/2023 | R | 827 | S | 20 | 20230425 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 827 | C | 1 | 20220210 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | R | 827 | stop | 66 | 20220531 |
| EPI_ISL_11176209 | NSP3 | hCoV-19/Australia/VIC44436/2022 | R | 827 | M | 16 | 20220219 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | R | 827 | F | 90 | 20240322 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | R | 827 | D | 1 | 20210318 |
| EPI_ISL_17181350 | NSP3 | hCoV-19/USA/TX-HMH-M-126483/2023 | R | 827 | V | 65 | 20230227 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | R | 827 | I | 2 | 20210803 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | R | 827 | del | 68 | 20240904 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | R | 827 | K | 25 | 20240123 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | R | 827 | N | 1 | 20220723 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | R | 827 | Y | 1 | 20210622 |
| EPI_ISL_15681715 | NSP3 | hCoV-19/Turkey/KSS-HEEAH4845949576/2022 | R | 827 | G | 2 | 20221025 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | R | 827 | insV | 2 | 20211109 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | R | 827 | Q | 4 | 20221024 |
| EPI_ISL_8435630 | NSP3 | hCoV-19/USA/OR_UO_MAP001541_S144_L001/2022 | R | 827 | W | 4 | 20220103 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | R | 827 | T | 4 | 20220604 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | R | 827 | E | 3 | 20220509 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | R | 827 | A | 1 | 20210319 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | R | 827 | insSNET | 1 | 20210316 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | R | 827 | L | 11 | 20220620 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | Y | 828 | I | 12 | 20221024 |
| EPI_ISL_15415373 | NSP3 | hCoV-19/USA/ID-IBL-858370/2022 | Y | 828 | insstopVH | 3 | 20221004 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Y | 828 | R | 2 | 20240123 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 828 | E | 1 | 20210318 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | Y | 828 | W | 97 | 20240322 |
| EPI_ISL_18065362 | NSP3 | hCoV-19/USA/MS-MSPHL-0258/2023 | Y | 828 | F | 18 | 20230718 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | Y | 828 | stop | 6 | 20220628 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 828 | K | 1 | 20220210 |
| EPI_ISL_19670048 | NSP3 | hCoV-19/Netherlands/UT-RIVM-144809/2024 | Y | 828 | H | 122 | 20241218 |
| EPI_ISL_19621954 | NSP3 | hCoV-19/USA/NE-L383201466/2024 | Y | 828 | C | 43 | 20241119 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | Y | 828 | V | 67 | 20220531 |
| EPI_ISL_2332783 | NSP3 | hCoV-19/India/MH-NCCS-2749001174302/2021 | Y | 828 | D | 2 | 20210420 |
| EPI_ISL_12146045 | NSP3 | hCoV-19/Turkey/HSGM-GS1422/2022 | Y | 828 | N | 4 | 20220401 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Y | 828 | del | 52 | 20240904 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | Y | 828 | T | 1 | 20220723 |
| EPI_ISL_17253366 | NSP3 | hCoV-19/Sichuan/LZCDC-23027/2023 | Y | 828 | S | 4 | 20230227 |
| EPI_ISL_12319895 | NSP3 | hCoV-19/Turkey/HSGM-GS1743/2022 | Y | 828 | L | 2 | 20220401 |
| EPI_ISL_12146159 | NSP3 | hCoV-19/Turkey/HSGM-GS1685/2022 | M | 829 | A | 1 | 20220401 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | M | 829 | H | 55 | 20220531 |
| EPI_ISL_19503871 | NSP3 | hCoV-19/Canada/BC-BCCDC-740616/2024 | M | 829 | V | 292 | 20241001 |
| EPI_ISL_19820042 | NSP3 | hCoV-19/Canada/ON-PHL-202504966/2025 | M | 829 | I | 3172 | 20250318 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | M | 829 | del | 39 | 20240904 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | M | 829 | stop | 1 | 20220818 |
| EPI_ISL_19513049 | NSP3 | hCoV-19/USA/DC-DFS-PHL-11284/2024 | M | 829 | T | 285 | 20240923 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | M | 829 | Q | 4 | 20240123 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | M | 829 | C | 1 | 20210318 |
| EPI_ISL_18065362 | NSP3 | hCoV-19/USA/MS-MSPHL-0258/2023 | M | 829 | R | 4 | 20230718 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | M | 829 | N | 1 | 20210327 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | M | 829 | K | 1 | 20210803 |
| EPI_ISL_12312676 | NSP3 | hCoV-19/England/LSPA-3D99DB4/2022 | M | 829 | S | 5 | 20220419 |
| EPI_ISL_19405755 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08141/2024 | M | 829 | L | 52 | 20240819 |
| EPI_ISL_19150459 | NSP3 | hCoV-19/Hubei/HCDC-HG5064/2024 | S | 830 | A | 17 | 20240424 |
| EPI_ISL_13346214 | NSP3 | hCoV-19/USA/ID-IBL-824237/2022 | S | 830 | V | 54 | 20220531 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | S | 830 | T | 7 | 20221024 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | S | 830 | stop | 8 | 20220729 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 830 | K | 1 | 20220210 |
| EPI_ISL_16910191 | NSP3 | hCoV-19/Australia/VIC80911/2023 | S | 830 | P | 6 | 20230117 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | S | 830 | R | 2 | 20210803 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | S | 830 | I | 2 | 20221130 |
| EPI_ISL_6125258 | NSP3 | hCoV-19/Sweden/UUH-000200211840/2021 | S | 830 | insXX | 1 | 20211021 |
| EPI_ISL_11018009 | NSP3 | hCoV-19/India/KA-SEQ_7237_S34_R1_001/2021 | S | 830 | Y | 5 | 20211125 |
| EPI_ISL_16401340 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1125/2022 | S | 830 | N | 2 | 20221219 |
| EPI_ISL_2710477 | NSP3 | hCoV-19/South Korea/KDCA4742/2021 | S | 830 | E | 1 | 20210530 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | S | 830 | del | 37 | 20240904 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | S | 830 | G | 103 | 20240322 |
| EPI_ISL_11355270 | NSP3 | hCoV-19/France/GES-ChNa-210065676101/2021 | S | 830 | Q | 1 | 20210813 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | S | 830 | H | 2 | 20220604 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | S | 830 | L | 498 | 20230217 |
| EPI_ISL_5049890 | NSP3 | hCoV-19/Spain/CT-LabRefCat-524671/2021 | S | 830 | C | 1 | 20210714 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | S | 830 | D | 1 | 20231013 |
| EPI_ISL_11799944 | NSP3 | hCoV-19/USA/ID-IBL-808457/2022 | S | 830 | M | 2 | 20220323 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | A | 831 | C | 1 | 20210726 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | A | 831 | F | 2 | 20240123 |
| EPI_ISL_17181350 | NSP3 | hCoV-19/USA/TX-HMH-M-126483/2023 | A | 831 | I | 74 | 20230227 |
| EPI_ISL_19793478 | NSP3 | hCoV-19/Spain/CB-HUMV-5437601/2025 | A | 831 | S | 482 | 20250301 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | A | 831 | stop | 1 | 20220604 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | A | 831 | D | 1 | 20220723 |
| EPI_ISL_19810363 | NSP3 | hCoV-19/Singapore/Y25R13MSC8/2025 | A | 831 | V | 882 | 20250319 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | A | 831 | G | 4 | 20231013 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | A | 831 | R | 1 | 20210319 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | A | 831 | Y | 10 | 20220620 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | A | 831 | Q | 1 | 20220321 |
| EPI_ISL_19714319 | NSP3 | hCoV-19/Russia/TYU-RII-MH217374S/2024 | A | 831 | T | 636 | 20241129 |
| EPI_ISL_19425852 | NSP3 | hCoV-19/USA/TX-HMH-M-145151/2024 | A | 831 | P | 5 | 20240817 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | A | 831 | L | 4 | 20220823 |
| EPI_ISL_2710477 | NSP3 | hCoV-19/South Korea/KDCA4742/2021 | A | 831 | E | 2 | 20210530 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | A | 831 | H | 1 | 20220726 |
| EPI_ISL_19477525 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS-112834/2024 | A | 831 | del | 42 | 20240910 |
| EPI_ISL_11507678 | NSP3 | hCoV-19/Turkey/HSGM-G7636/2022 | L | 832 | F | 4 | 20220311 |
| EPI_ISL_17884194 | NSP3 | hCoV-19/Japan/PG-532010/2023 | L | 832 | S | 20 | 20230501 |
| EPI_ISL_1751009 | NSP3 | hCoV-19/Germany/BY-MVP-000003699/2020 | L | 832 | J | 1 | 20201215 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 832 | N | 1 | 20210318 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | L | 832 | H | 1 | 20240123 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 832 | del | 40 | 20240904 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | L | 832 | I | 66 | 20221024 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | L | 832 | G | 1 | 20210319 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | L | 832 | C | 112 | 20240322 |
| EPI_ISL_19323975 | NSP3 | hCoV-19/USA/MS-MSPHL-0269/2024 | L | 832 | A | 5 | 20240722 |
| EPI_ISL_13647727 | NSP3 | hCoV-19/USA/ID-IBL-828496/2022 | L | 832 | insHstop | 1 | 20220604 |
| EPI_ISL_12005434 | NSP3 | hCoV-19/Thailand/NIC_TRG_13944/2022 | L | 832 | T | 1 | 20220315 |
| EPI_ISL_13346206 | NSP3 | hCoV-19/USA/ID-IBL-824087/2022 | L | 832 | Y | 2 | 20220531 |
| EPI_ISL_17181350 | NSP3 | hCoV-19/USA/TX-HMH-M-126483/2023 | L | 832 | K | 76 | 20230227 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 832 | D | 2 | 20220509 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | L | 832 | insTLYD | 1 | 20210316 |
| EPI_ISL_19014002 | NSP3 | hCoV-19/Japan/4141461_S19/2023 | L | 832 | stop | 3 | 20231115 |
| EPI_ISL_18355867 | NSP3 | hCoV-19/England/CLIMB-CM7Y84NY/2023 | L | 832 | V | 21 | 20230922 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | L | 832 | insQHstop | 1 | 20210812 |
| EPI_ISL_19311082 | NSP3 | hCoV-19/USA/UT-UPHL-240802118813/2024 | N | 833 | T | 36 | 20240720 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | N | 833 | G | 1 | 20220427 |
| EPI_ISL_9406561 | NSP3 | hCoV-19/USA/MA-UMASSMED-202131519/2021 | N | 833 | B | 4 | 20211205 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | N | 833 | insCstop | 1 | 20220602 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | N | 833 | R | 1 | 20210804 |
| EPI_ISL_19794935 | NSP3 | hCoV-19/USA/LA-EVTL23578/2025 | N | 833 | K | 354 | 20250309 |
| EPI_ISL_8803751 | NSP3 | hCoV-19/India/MH-NCCS-2750000384250/2021 | N | 833 | stop | 1 | 20210714 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | N | 833 | del | 38 | 20230217 |
| EPI_ISL_19780000 | NSP3 | hCoV-19/USA/NY-SUNYQB-X1055395/2025 | N | 833 | S | 410 | 20250301 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | N | 833 | P | 4 | 20240123 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | N | 833 | C | 2 | 20220628 |
| EPI_ISL_18558400 | NSP3 | hCoV-19/Sweden/AC-460206305118/2023 | N | 833 | I | 13 | 20230731 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | N | 833 | insPLHCstop | 1 | 20221024 |
| EPI_ISL_19070999 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6668/2024 | N | 833 | Q | 100 | 20240322 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 833 | F | 1 | 20220210 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | N | 833 | insHstopX | 8 | 20211227 |
| EPI_ISL_1236583 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-26802/2021 | N | 833 | A | 1 | 20210225 |
| EPI_ISL_12309149 | NSP3 | hCoV-19/Vietnam/NHTD-OUCRU2531/2022 | N | 833 | Y | 7 | 20220321 |
| EPI_ISL_19590159 | NSP3 | hCoV-19/Spain/VC-CVA_CAST-126433/2024 | N | 833 | H | 42 | 20240823 |
| EPI_ISL_19425558 | NSP3 | hCoV-19/USA/TX-HMH-M-145890/2024 | N | 833 | D | 6 | 20240830 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | N | 833 | L | 6 | 20221024 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | H | 834 | insstopITLKSGN | 3 | 20220121 |
| EPI_ISL_12492802 | NSP3 | hCoV-19/India/UP-ICMR-INSACOG-KGMU-ZY34/126/2022 | H | 834 | P | 4 | 20220418 |
| EPI_ISL_19362992 | NSP3 | hCoV-19/New Zealand/24YA6402/2024 | H | 834 | N | 53 | 20240805 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | H | 834 | E | 3 | 20220723 |
| EPI_ISL_14333843 | NSP3 | hCoV-19/USA/ID-IBL-841480/2022 | H | 834 | stop | 2 | 20220729 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | H | 834 | M | 1 | 20210318 |
| EPI_ISL_19623951 | NSP3 | hCoV-19/Japan/FR302-1593/2024 | H | 834 | R | 360 | 20241111 |
| EPI_ISL_19812381 | NSP3 | hCoV-19/Germany/MV-RKI-I-1147943/2025 | H | 834 | Y | 362 | 20250310 |
| EPI_ISL_5054176 | NSP3 | hCoV-19/Senegal/SN-THI-201240/2020 | H | 834 | insstopBH | 1 | 20200626 |
| EPI_ISL_18614742 | NSP3 | hCoV-19/USA/CA-HLX-STM-A7MTKSPBK/2023 | H | 834 | L | 44 | 20231105 |
| EPI_ISL_19422839 | NSP3 | hCoV-19/USA/TN-UM-L5794938847225/2024 | H | 834 | Q | 80 | 20240820 |
| EPI_ISL_14253458 | NSP3 | hCoV-19/USA/ID-IBL-838514/2022 | H | 834 | insstopKstopNT | 2 | 20220720 |
| EPI_ISL_12291367 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1100/2022 | H | 834 | F | 2 | 20220114 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | H | 834 | insQ | 1 | 20220804 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | H | 834 | K | 14 | 20220725 |
| EPI_ISL_15457460 | NSP3 | hCoV-19/Sweden/03_SE600_500000077705SP/2022 | H | 834 | insstopXXX | 1 | 20220120 |
| EPI_ISL_13633243 | NSP3 | hCoV-19/Sweden/03_SE600_500000060283SP/2022 | H | 834 | insstopIT | 13 | 20220106 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | H | 834 | insstopI | 19 | 20230330 |
| EPI_ISL_11326419 | NSP3 | hCoV-19/France/IDF-ChVe-21465903/2021 | H | 834 | insstopKVEIP | 6 | 20211120 |
| EPI_ISL_17547361 | NSP3 | hCoV-19/Thailand/NIC_ATG_1223/2023 | H | 834 | J | 1 | 20230410 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | H | 834 | S | 64 | 20240123 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | H | 834 | V | 3 | 20231013 |
| EPI_ISL_3988911 | NSP3 | hCoV-19/USA/CO-CDPHE-2101471307/2021 | H | 834 | D | 1 | 20210721 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | H | 834 | del | 39 | 20230217 |
| EPI_ISL_18274881 | NSP3 | hCoV-19/env/Ukraine/80118/2023 | T | 835 | K | 3 | 20230724 |
| EPI_ISL_19813394 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56793/2025 | T | 835 | I | 941 | 20250317 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | T | 835 | L | 19 | 20220804 |
| EPI_ISL_17181350 | NSP3 | hCoV-19/USA/TX-HMH-M-126483/2023 | T | 835 | stop | 96 | 20230227 |
| EPI_ISL_19282847 | NSP3 | hCoV-19/USA/MS-MSPHL-0243/2024 | T | 835 | R | 4 | 20240708 |
| EPI_ISL_17034975 | NSP3 | hCoV-19/Italy/CAM-90390373750_IZSM_COLLI_TIGEM/2023 | T | 835 | G | 2 | 20230214 |
| EPI_ISL_19530795 | NSP3 | hCoV-19/Australia/WA16477/2024 | T | 835 | A | 109 | 20241011 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | T | 835 | insFPstop | 1 | 20210803 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | T | 835 | V | 4 | 20221226 |
| EPI_ISL_18423503 | NSP3 | hCoV-19/USA/TX-HMH-134715/2023 | T | 835 | H | 67 | 20231006 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | T | 835 | del | 42 | 20230217 |
| EPI_ISL_19705489 | NSP3 | hCoV-19/USA/MS-MSPHL-0001/2025 | T | 835 | S | 28 | 20250108 |
| EPI_ISL_11887198 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0488/2021 | T | 835 | P | 4 | 20211220 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | T | 835 | E | 1 | 20240904 |
| EPI_ISL_2545116 | NSP3 | hCoV-19/USA/WA-UW-21052822141/2021 | T | 835 | Q | 1 | 20210528 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | T | 835 | M | 1 | 20220823 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | T | 835 | F | 1 | 20200807 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 835 | N | 15 | 20240123 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | T | 835 | C | 1 | 20220628 |
| EPI_ISL_19658762 | NSP3 | hCoV-19/USA/MN-MDH-44769/2024 | K | 836 | N | 38 | 20241211 |
| EPI_ISL_19507709 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17290271/2024 | K | 836 | I | 50 | 20241001 |
| EPI_ISL_13422081 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2428/2022 | K | 836 | C | 1 | 20220607 |
| EPI_ISL_19705507 | NSP3 | hCoV-19/USA/MS-MSPHL-0014/2025 | K | 836 | V | 22 | 20250128 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | K | 836 | L | 25 | 20240123 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | K | 836 | G | 1 | 20240904 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | K | 836 | P | 1 | 20210319 |
| EPI_ISL_19643828 | NSP3 | hCoV-19/USA/NY-URMC-P2S1T302-1/2024 | K | 836 | T | 91 | 20241212 |
| EPI_ISL_19216805 | NSP3 | hCoV-19/USA/NC-1085-10708/2024 | K | 836 | E | 82 | 20240529 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | K | 836 | del | 50 | 20230217 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | K | 836 | insHstop | 1 | 20210809 |
| EPI_ISL_19824630 | NSP3 | hCoV-19/Wales/CLIMB-CM7YF1GK/2025 | K | 836 | R | 150 | 20250326 |
| EPI_ISL_19705489 | NSP3 | hCoV-19/USA/MS-MSPHL-0001/2025 | K | 836 | Q | 17 | 20250108 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | K | 836 | H | 5 | 20220121 |
| EPI_ISL_18570574 | NSP3 | hCoV-19/USA/MS-MSPHL-0867/2023 | K | 836 | Y | 16 | 20231117 |
| EPI_ISL_18423503 | NSP3 | hCoV-19/USA/TX-HMH-134715/2023 | K | 836 | stop | 84 | 20231006 |
| EPI_ISL_19282847 | NSP3 | hCoV-19/USA/MS-MSPHL-0243/2024 | K | 836 | S | 12 | 20240708 |
| EPI_ISL_18670577 | NSP3 | hCoV-19/New Zealand/23YA7456/2023 | K | 837 | Q | 46 | 20231208 |
| EPI_ISL_12572400 | NSP3 | hCoV-19/Egypt/CPHL-21713/2022 | K | 837 | C | 4 | 20220113 |
| EPI_ISL_19780411 | NSP3 | hCoV-19/USA/NY-PRL-250311_82F04/2025 | K | 837 | R | 673 | 20250227 |
| EPI_ISL_19828731 | NSP3 | hCoV-19/USA/WA-GBW-GKISBBBE06026/2025 | K | 837 | N | 37362 | 20250402 |
| EPI_ISL_13812285 | NSP3 | hCoV-19/USA/ID-IBL-831832/2022 | K | 837 | L | 4 | 20220624 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 837 | A | 1 | 20210318 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | K | 837 | V | 3 | 20220726 |
| EPI_ISL_19782821 | NSP3 | hCoV-19/Chile/VS-ISPC-20045/2025 | K | 837 | T | 119 | 20250306 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | K | 837 | F | 1 | 20220723 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | K | 837 | I | 3 | 20231013 |
| EPI_ISL_14796042 | NSP3 | hCoV-19/Sweden/03_SE600_500000135258SP/2022 | K | 837 | insXXX | 2 | 20220113 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | K | 837 | D | 1 | 20210319 |
| EPI_ISL_5637745 | NSP3 | hCoV-19/France/GES-HMN-21092170374/2021 | K | 837 | G | 3 | 20210906 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | K | 837 | S | 32 | 20240701 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | K | 837 | del | 71 | 20231218 |
| EPI_ISL_19679936 | NSP3 | hCoV-19/USA/MN-MDH-45287/2024 | K | 837 | E | 72 | 20241230 |
| EPI_ISL_3588749 | NSP3 | hCoV-19/USA/ID-IBL-746253/2021 | K | 837 | insEIPstopSstop | 1 | 20210802 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | K | 837 | H | 2 | 20240123 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | K | 837 | insL | 1 | 20211006 |
| EPI_ISL_18640901 | NSP3 | hCoV-19/Czech Republic/NRL_c2893/2023 | K | 837 | M | 74 | 20231129 |
| EPI_ISL_15415373 | NSP3 | hCoV-19/USA/ID-IBL-858370/2022 | K | 837 | stop | 12 | 20221004 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | W | 838 | I | 3 | 20220725 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | W | 838 | Y | 3 | 20230109 |
| EPI_ISL_19507709 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17290271/2024 | W | 838 | V | 113 | 20241001 |
| EPI_ISL_14584702 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16475/2022 | W | 838 | R | 10 | 20220802 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | W | 838 | F | 2 | 20210327 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | W | 838 | T | 1 | 20240904 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | W | 838 | K | 3 | 20240123 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | W | 838 | H | 1 | 20220818 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | W | 838 | insstopCG | 1 | 20210803 |
| EPI_ISL_5406586 | NSP3 | hCoV-19/Sweden/UUH-000200035775/2021 | W | 838 | insXXX | 1 | 20210520 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | W | 838 | D | 1 | 20210318 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | W | 838 | del | 71 | 20230217 |
| EPI_ISL_18889176 | NSP3 | hCoV-19/Cameroon/LNSP-011-D013464/2024 | W | 838 | C | 15 | 20240123 |
| EPI_ISL_18370784 | NSP3 | hCoV-19/env/Germany/BY-LGL-6002272/2023 | W | 838 | stop | 28 | 20230918 |
| EPI_ISL_17221911 | NSP3 | hCoV-19/Slovenia/5C-000516-KP/2023 | W | 838 | S | 2 | 20230220 |
| EPI_ISL_13044526 | NSP3 | hCoV-19/USA/ID-IBL-821031/2022 | W | 838 | M | 2 | 20220516 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | W | 838 | insstopLGH | 1 | 20210428 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | W | 838 | G | 28 | 20240701 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | W | 838 | L | 35 | 20230101 |
| EPI_ISL_19517509 | NSP3 | hCoV-19/Denmark/DCGC-689938/2024 | K | 839 | R | 1193 | 20241014 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | K | 839 | del | 75 | 20230217 |
| EPI_ISL_14224102 | NSP3 | hCoV-19/USA/ID-IBL-835609/2022 | K | 839 | stop | 4 | 20220708 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | K | 839 | V | 3 | 20221226 |
| EPI_ISL_12934369 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1589/2022 | K | 839 | G | 3 | 20220119 |
| EPI_ISL_14912155 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00014724_01/2022 | K | 839 | I | 17 | 20220819 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | K | 839 | insCQstopH | 1 | 20211006 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | K | 839 | F | 7 | 20240904 |
| EPI_ISL_19832992 | NSP3 | hCoV-19/Japan/FR032-0069/2025 | K | 839 | Q | 175 | 20250213 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | K | 839 | P | 2 | 20231013 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | K | 839 | H | 3 | 20230109 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | K | 839 | S | 9 | 20221024 |
| EPI_ISL_19573394 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-21K-MM00046R/2024 | K | 839 | N | 186 | 20241121 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | K | 839 | C | 1 | 20240123 |
| EPI_ISL_12573673 | NSP3 | hCoV-19/USA/ID-IBL-816438/2022 | K | 839 | insDEV | 1 | 20220427 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | K | 839 | insLV | 1 | 20230109 |
| EPI_ISL_13812301 | NSP3 | hCoV-19/USA/ID-IBL-832286/2022 | K | 839 | insstop | 2 | 20220628 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | K | 839 | M | 3 | 20220121 |
| EPI_ISL_19183334 | NSP3 | hCoV-19/Australia/SA1565021/2024 | K | 839 | T | 208 | 20240524 |
| EPI_ISL_19499328 | NSP3 | hCoV-19/USA/TX-HMH-M-146560/2024 | K | 839 | E | 2915 | 20240926 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | K | 839 | L | 2 | 20220818 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | Y | 840 | F | 6 | 20220818 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Y | 840 | C | 12 | 20240123 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | Y | 840 | T | 25 | 20240701 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | Y | 840 | del | 82 | 20230217 |
| EPI_ISL_18119697 | NSP3 | hCoV-19/USA/TX-HMH-M-131420/2023 | Y | 840 | S | 24 | 20230810 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 840 | A | 1 | 20240307 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | Y | 840 | insstop | 3 | 20220121 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | Y | 840 | R | 1 | 20220723 |
| EPI_ISL_11106093 | NSP3 | hCoV-19/Indonesia/SG-NIHRD-WGS-22-03378/2022 | Y | 840 | D | 3 | 20220202 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 840 | M | 1 | 20211006 |
| EPI_ISL_19499328 | NSP3 | hCoV-19/USA/TX-HMH-M-146560/2024 | Y | 840 | I | 95 | 20240926 |
| EPI_ISL_19378520 | NSP3 | hCoV-19/env/Ukraine/86520/2024 | Y | 840 | H | 17 | 20240722 |
| EPI_ISL_19507709 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17290271/2024 | Y | 840 | V | 4 | 20241001 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | Y | 840 | L | 4 | 20221226 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | Y | 840 | insII | 1 | 20220725 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | Y | 840 | W | 2 | 20220726 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | Y | 840 | P | 1 | 20210428 |
| EPI_ISL_18875878 | NSP3 | hCoV-19/Guam/GU_PHL_350062/2023 | Y | 840 | N | 14 | 20230911 |
| EPI_ISL_18346017 | NSP3 | hCoV-19/env/Ukraine/79976/2023 | Y | 840 | stop | 7 | 20230508 |
| EPI_ISL_19641169 | NSP3 | hCoV-19/USA/CA-PFZ02338/2024 | P | 841 | T | 428 | 20240913 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | P | 841 | stop | 2 | 20220723 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | P | 841 | K | 3 | 20220725 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | P | 841 | Y | 1 | 20240123 |
| EPI_ISL_11326419 | NSP3 | hCoV-19/France/IDF-ChVe-21465903/2021 | P | 841 | F | 6 | 20211120 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | P | 841 | N | 3 | 20231013 |
| EPI_ISL_19301710 | NSP3 | hCoV-19/USA/HI-H2329820/2024 | P | 841 | A | 164 | 20240603 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 841 | D | 1 | 20211006 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | P | 841 | insT | 1 | 20210915 |
| EPI_ISL_18901397 | NSP3 | hCoV-19/Turkey/HSGM-AA001885/2023 | P | 841 | I | 2 | 20231125 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | P | 841 | del | 84 | 20230217 |
| EPI_ISL_19699502 | NSP3 | hCoV-19/USA/CA-PFZ03224/2024 | P | 841 | Q | 32 | 20241226 |
| EPI_ISL_19813373 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56772/2025 | P | 841 | L | 4035 | 20250322 |
| EPI_ISL_16852878 | NSP3 | hCoV-19/USA/ID-IBL-873580/2023 | P | 841 | G | 20 | 20230109 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | P | 841 | insL | 1 | 20221226 |
| EPI_ISL_19805568 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U614-1/2025 | P | 841 | S | 1193 | 20250217 |
| EPI_ISL_3756896 | NSP3 | hCoV-19/USA/ID-IBL-746949/2021 | P | 841 | insTSstopWF | 1 | 20210806 |
| EPI_ISL_18741262 | NSP3 | hCoV-19/Denmark/DCGC-669572/2023 | P | 841 | R | 20 | 20231225 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | P | 841 | V | 2 | 20240904 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | P | 841 | H | 21 | 20240701 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | P | 841 | C | 1 | 20220623 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | Q | 842 | S | 2 | 20231013 |
| EPI_ISL_1594444 | NSP3 | hCoV-19/France/CVL-IPP08542/2021 | Q | 842 | P | 1 | 20210329 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | Q | 842 | K | 26 | 20240701 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | Q | 842 | insLMVstopLL | 1 | 20220630 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | Q | 842 | I | 1 | 20220628 |
| EPI_ISL_16739024 | NSP3 | hCoV-19/Israel/CVL-9008988/2023 | Q | 842 | N | 26 | 20230117 |
| EPI_ISL_13812285 | NSP3 | hCoV-19/USA/ID-IBL-831832/2022 | Q | 842 | Y | 9 | 20220624 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | Q | 842 | del | 83 | 20230217 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Q | 842 | L | 114 | 20240904 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | Q | 842 | V | 1 | 20240123 |
| EPI_ISL_1236991 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-27209/2021 | Q | 842 | stop | 1 | 20210221 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 842 | G | 1 | 20220210 |
| EPI_ISL_19642174 | NSP3 | hCoV-19/USA/CA-PFZ01333/2024 | Q | 842 | H | 140 | 20240902 |
| EPI_ISL_17592973 | NSP3 | hCoV-19/Italy/LOM-ASST-69354822/2023 | Q | 842 | R | 17 | 20230426 |
| EPI_ISL_15416622 | NSP3 | hCoV-19/USA/ID-IBL-854842/2022 | Q | 842 | insLMVstopL | 1 | 20220912 |
| EPI_ISL_15693017 | NSP3 | hCoV-19/USA/ID-IBL-861143/2022 | Q | 842 | T | 42 | 20221019 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 842 | E | 33 | 20240307 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | V | 843 | H | 1 | 20231013 |
| EPI_ISL_19741624 | NSP3 | hCoV-19/Japan/FR302-0131/2025 | V | 843 | A | 29 | 20250130 |
| EPI_ISL_16517813 | NSP3 | hCoV-19/Japan/OPHO-Hb23-1978-2/2023 | V | 843 | D | 1 | 20230106 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | V | 843 | stop | 8 | 20220623 |
| EPI_ISL_19729289 | NSP3 | hCoV-19/Japan/FR011-0053/2025 | V | 843 | I | 199 | 20250125 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 843 | K | 2 | 20220210 |
| EPI_ISL_14881072 | NSP3 | hCoV-19/USA/ID-IBL-847139/2022 | V | 843 | T | 21 | 20220818 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | V | 843 | del | 71 | 20230217 |
| EPI_ISL_3299462 | NSP3 | hCoV-19/Sweden/UUH-000199805889N2/2021 | V | 843 | insXX | 1 | 20210428 |
| EPI_ISL_15693017 | NSP3 | hCoV-19/USA/ID-IBL-861143/2022 | V | 843 | S | 45 | 20221019 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | V | 843 | G | 6 | 20240307 |
| EPI_ISL_18874343 | NSP3 | hCoV-19/USA/TX-HMH-M-138323/2024 | V | 843 | F | 16 | 20240123 |
| EPI_ISL_13346206 | NSP3 | hCoV-19/USA/ID-IBL-824087/2022 | V | 843 | N | 1 | 20220531 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | V | 843 | P | 2 | 20240904 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | V | 843 | L | 31 | 20240701 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | V | 843 | insMVstopLLL | 1 | 20210805 |
| EPI_ISL_3756838 | NSP3 | hCoV-19/USA/ID-IBL-747076/2021 | N | 844 | C | 1 | 20210806 |
| EPI_ISL_15434247 | NSP3 | hCoV-19/Canada/ON-PHL-22-44503/2022 | N | 844 | Y | 21 | 20221011 |
| EPI_ISL_12291367 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1100/2022 | N | 844 | V | 1 | 20220114 |
| EPI_ISL_18751687 | NSP3 | hCoV-19/South Korea/KDCA281325/2023 | N | 844 | H | 22 | 20231226 |
| EPI_ISL_19316595 | NSP3 | hCoV-19/Germany/BY-RKI-I-1144212/2024 | N | 844 | D | 141 | 20240715 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | N | 844 | E | 7 | 20231013 |
| EPI_ISL_19673955 | NSP3 | hCoV-19/Israel/SMC-7118717/2025 | N | 844 | S | 3727 | 20250104 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | N | 844 | A | 1 | 20240307 |
| EPI_ISL_4109594 | NSP3 | hCoV-19/Italy/CAM-RD20702457676/2021 | N | 844 | F | 2 | 20210825 |
| EPI_ISL_17542341 | NSP3 | hCoV-19/England/PHEC-YYEUN44/2023 | N | 844 | B | 8 | 20230404 |
| EPI_ISL_18226259 | NSP3 | hCoV-19/USA/VA-CDC-LC1053588/2023 | N | 844 | K | 15 | 20230826 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | N | 844 | R | 2 | 20220509 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | N | 844 | L | 2 | 20220725 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | N | 844 | M | 23 | 20240701 |
| EPI_ISL_17696624 | NSP3 | hCoV-19/Australia/WA13445/2023 | N | 844 | I | 24 | 20230507 |
| EPI_ISL_19784813 | NSP3 | hCoV-19/Spain/CT-HUGTiP-D1R206/2025 | N | 844 | T | 141 | 20250308 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | N | 844 | del | 63 | 20230217 |
| EPI_ISL_15693017 | NSP3 | hCoV-19/USA/ID-IBL-861143/2022 | N | 844 | stop | 42 | 20221019 |
| EPI_ISL_14987760 | NSP3 | hCoV-19/USA/NY-Wadsworth-22031626-01/2022 | N | 844 | G | 12 | 20220701 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | G | 845 | Q | 3 | 20221226 |
| EPI_ISL_13812285 | NSP3 | hCoV-19/USA/ID-IBL-831832/2022 | G | 845 | stop | 2 | 20220624 |
| EPI_ISL_10497477 | NSP3 | hCoV-19/env/Wuhan/IVDC-HBA20/2020 | G | 845 | insNFYstop | 1 | 20200101 |
| EPI_ISL_9847137 | NSP3 | hCoV-19/USA/CA-UCSF-CC596/2021 | G | 845 | P | 2 | 20210808 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | G | 845 | V | 25 | 20240701 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | G | 845 | I | 5 | 20220131 |
| EPI_ISL_19735259 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10199/2025 | G | 845 | D | 1280 | 20250126 |
| EPI_ISL_13812263 | NSP3 | hCoV-19/USA/ID-IBL-831340/2022 | G | 845 | N | 4 | 20220623 |
| EPI_ISL_13812301 | NSP3 | hCoV-19/USA/ID-IBL-832286/2022 | G | 845 | T | 3 | 20220628 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | G | 845 | E | 10 | 20220620 |
| EPI_ISL_15693017 | NSP3 | hCoV-19/USA/ID-IBL-861143/2022 | G | 845 | W | 41 | 20221019 |
| EPI_ISL_15998849 | NSP3 | hCoV-19/USA/ID-IBL-866106/2022 | G | 845 | L | 4 | 20221122 |
| EPI_ISL_19215418 | NSP3 | hCoV-19/Spain/VC-CVA_CLIN-123741/2024 | G | 845 | C | 66 | 20240123 |
| EPI_ISL_17642284 | NSP3 | hCoV-19/Sweden/C-126803SP/2022 | G | 845 | insXXX | 1 | 20220217 |
| EPI_ISL_13812299 | NSP3 | hCoV-19/USA/ID-IBL-832280/2022 | G | 845 | F | 3 | 20220628 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | G | 845 | R | 13 | 20240307 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | G | 845 | del | 64 | 20230217 |
| EPI_ISL_19673730 | NSP3 | hCoV-19/Switzerland/BS-USB_12_05_34ad4e30/2024 | G | 845 | S | 388 | 20241117 |
| EPI_ISL_15416622 | NSP3 | hCoV-19/USA/ID-IBL-854842/2022 | G | 845 | insQ | 3 | 20220912 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | G | 845 | M | 1 | 20200803 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | G | 845 | K | 19 | 20211228 |
| EPI_ISL_14388178 | NSP3 | hCoV-19/France/ARA-GENBIO-28292135056/2022 | G | 845 | A | 6 | 20220801 |
| EPI_ISL_18525815 | NSP3 | hCoV-19/Germany/BY-MVP-000022175/2023 | L | 846 | F | 171 | 20231024 |
| EPI_ISL_17785884 | NSP3 | hCoV-19/Thailand/NIC_PBI_4927/2023 | L | 846 | P | 10 | 20230515 |
| EPI_ISL_19158516 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00020245_01/2023 | L | 846 | S | 57 | 20231212 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | L | 846 | A | 1 | 20240307 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | L | 846 | E | 1 | 20240123 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 846 | N | 12 | 20230101 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 846 | R | 9 | 20230104 |
| EPI_ISL_11860460 | NSP3 | hCoV-19/Israel/ICH-741209538/2022 | L | 846 | insTG | 2 | 20220319 |
| EPI_ISL_17040748 | NSP3 | hCoV-19/South Korea/KDCA212841/2023 | L | 846 | I | 16 | 20230128 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 846 | D | 1 | 20240904 |
| EPI_ISL_16553507 | NSP3 | hCoV-19/USA/ID-IBL-872342/2022 | L | 846 | V | 70 | 20221228 |
| EPI_ISL_14796051 | NSP3 | hCoV-19/Sweden/03_SE600_500000140554N2/2022 | L | 846 | insXXXXX | 1 | 20220113 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | L | 846 | Q | 2 | 20220121 |
| EPI_ISL_19351744 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1935/2024 | L | 846 | stop | 20 | 20240701 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | L | 846 | K | 1 | 20231013 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | L | 846 | del | 49 | 20230217 |
| EPI_ISL_16225767 | NSP3 | hCoV-19/USA/ID-IBL-868173/2022 | L | 846 | Y | 3 | 20221130 |
| EPI_ISL_14901803 | NSP3 | hCoV-19/Mexico/COL_CIAD-IMSS_01031729/2022 | L | 846 | J | 2 | 20220817 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | L | 846 | T | 1 | 20221213 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | L | 846 | W | 1 | 20231218 |
| EPI_ISL_12471191 | NSP3 | hCoV-19/USA/ID-IBL-814458/2022 | L | 846 | M | 3 | 20220417 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 846 | C | 1 | 20230412 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | L | 846 | H | 1 | 20210803 |
| EPI_ISL_17708633 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200385555N2/2022 | L | 846 | insXXXX | 1 | 20220324 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | T | 847 | del | 39 | 20230217 |
| EPI_ISL_14881050 | NSP3 | hCoV-19/USA/ID-IBL-845683/2022 | T | 847 | P | 4 | 20220812 |
| EPI_ISL_11354927 | NSP3 | hCoV-19/France/GES-ChNa-210060108301/2021 | T | 847 | Y | 1 | 20210721 |
| EPI_ISL_8409173 | NSP3 | hCoV-19/Israel/ICH-741110254/2021 | T | 847 | insGTGVEIPTSstopWFNRHRC | 6 | 20211228 |
| EPI_ISL_12754223 | NSP3 | hCoV-19/USA/MS-MSPHL-327/2021 | T | 847 | insXXXXXX | 1 | 20210324 |
| EPI_ISL_17718913 | NSP3 | hCoV-19/Australia/NSW-ICPMR-46932/2023 | T | 847 | S | 13 | 20230512 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | T | 847 | K | 3 | 20231007 |
| EPI_ISL_13637794 | NSP3 | hCoV-19/Thailand/NIC_TRT_20477/2022 | T | 847 | insGTGVGN | 3 | 20220614 |
| EPI_ISL_17591235 | NSP3 | hCoV-19/Mexico/CMX-INMEGEN-101-218/2023 | T | 847 | insGTG | 113 | 20230323 |
| EPI_ISL_16517813 | NSP3 | hCoV-19/Japan/OPHO-Hb23-1978-2/2023 | T | 847 | C | 1 | 20230106 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | T | 847 | L | 21 | 20230214 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | T | 847 | stop | 12 | 20221226 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | T | 847 | insF | 1 | 20211222 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | T | 847 | V | 6 | 20240123 |
| EPI_ISL_19799724 | NSP3 | hCoV-19/USA/TX-HMH-M-147696/2025 | T | 847 | M | 28 | 20250225 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 847 | R | 2 | 20240307 |
| EPI_ISL_19819840 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJWYT/2025 | T | 847 | I | 4222 | 20250320 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | T | 847 | N | 46 | 20230412 |
| EPI_ISL_14333806 | NSP3 | hCoV-19/USA/ID-IBL-839963/2022 | T | 847 | E | 2 | 20220726 |
| EPI_ISL_11850599 | NSP3 | hCoV-19/Israel/ICH-741208197/2022 | T | 847 | insGTGVEIPTS | 22 | 20220317 |
| EPI_ISL_8986865 | NSP3 | hCoV-19/Israel/ICH-741114773/2022 | T | 847 | insGTGVEIPTSstopWFNRHRCGNTHKLMV | 2 | 20220113 |
| EPI_ISL_14881066 | NSP3 | hCoV-19/USA/ID-IBL-846978/2022 | T | 847 | W | 2 | 20220817 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | T | 847 | F | 5 | 20231218 |
| EPI_ISL_4915627 | NSP3 | hCoV-19/USA/TN-CDC-ASC210175374/2021 | T | 847 | insGTGGN | 1 | 20210826 |
| EPI_ISL_19179522 | NSP3 | hCoV-19/Spain/PV-HUD-70113532/2024 | T | 847 | A | 35 | 20240529 |
| EPI_ISL_8327502 | NSP3 | hCoV-19/Israel/ICH-741109683/2021 | T | 847 | insGTGVEIPTSstopWFNRHRCGN | 3 | 20211227 |
| EPI_ISL_15836365 | NSP3 | hCoV-19/Spain/EX-BA_18540882/2022 | T | 847 | insGTGEIPTS | 1 | 20220907 |
| EPI_ISL_9323071 | NSP3 | hCoV-19/Thailand/NIC_SKM_SEQ25006/2021 | T | 847 | insGTGVGNTHKLMVstopQAQVLEIPTS | 3 | 20211227 |
| EPI_ISL_8887872 | NSP3 | hCoV-19/Indonesia/JT-Labkes-42A/2022 | T | 847 | insGTGVA | 1 | 20220105 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | T | 847 | G | 12 | 20220620 |
| EPI_ISL_639911 | NSP3 | hCoV-19/Taiwan/w3586/2020 | S | 848 | insstopL | 1 | 20200320 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | S | 848 | G | 434 | 20230507 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | S | 848 | N | 13 | 20231218 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | S | 848 | del | 69 | 20240904 |
| EPI_ISL_18164299 | NSP3 | hCoV-19/USA/TX-HMH-M-131887/2023 | S | 848 | V | 21 | 20230818 |
| EPI_ISL_14907041 | NSP3 | hCoV-19/USA/ID-IBL-848326/2022 | S | 848 | C | 13 | 20220823 |
| EPI_ISL_12572305 | NSP3 | hCoV-19/Egypt/CPHL-21592/2022 | S | 848 | insTGVGNTHKLMVX | 2 | 20220116 |
| EPI_ISL_13812301 | NSP3 | hCoV-19/USA/ID-IBL-832286/2022 | S | 848 | insHSVRIstop | 1 | 20220628 |
| EPI_ISL_8765047 | NSP3 | hCoV-19/Israel/ICH-741111370/2022 | S | 848 | insTGVEIPX | 1 | 20220105 |
| EPI_ISL_16049837 | NSP3 | hCoV-19/USA/ID-IBL-864429/2022 | S | 848 | insVC | 1 | 20221110 |
| EPI_ISL_15514428 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-116722/2022 | S | 848 | F | 48 | 20221003 |
| EPI_ISL_8986916 | NSP3 | hCoV-19/Israel/ICH-741114869/2022 | S | 848 | insTGVEIPTSX | 6 | 20220117 |
| EPI_ISL_14288019 | NSP3 | hCoV-19/USA/ID-IBL-839534/2022 | S | 848 | M | 2 | 20220725 |
| EPI_ISL_12646693 | NSP3 | hCoV-19/Bangladesh/BSMMU_Laila_832/2022 | S | 848 | insTGKYPQVNX | 1 | 20220113 |
| EPI_ISL_17036354 | NSP3 | hCoV-19/USA/CT-YPL-1119/2023 | S | 848 | L | 161 | 20230214 |
| EPI_ISL_15927011 | NSP3 | hCoV-19/Bangladesh/icddrb-SV035/2022 | S | 848 | insTGX | 159 | 20221010 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 848 | Q | 13 | 20230108 |
| EPI_ISL_8175827 | NSP3 | hCoV-19/Israel/ICH-741107562/2021 | S | 848 | insTGVEIPTSstopWFNRHRCX | 1 | 20211221 |
| EPI_ISL_18346612 | NSP3 | hCoV-19/Italy/LOM_Unimi-3098/2023 | S | 848 | T | 24 | 20230925 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | S | 848 | insL | 1 | 20210809 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 848 | H | 10 | 20230101 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | S | 848 | R | 4 | 20240123 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | S | 848 | Y | 4 | 20240307 |
| EPI_ISL_19471197 | NSP3 | hCoV-19/Brazil/PA-IB_CEVC_2400916/2024 | S | 848 | A | 341 | 20240110 |
| EPI_ISL_19042007 | NSP3 | hCoV-19/Lithuania/MB231117_0010/2023 | S | 848 | P | 12 | 20231113 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | S | 848 | E | 1 | 20230104 |
| EPI_ISL_17785884 | NSP3 | hCoV-19/Thailand/NIC_PBI_4927/2023 | S | 848 | stop | 2 | 20230515 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | S | 848 | D | 11 | 20220620 |
| EPI_ISL_14333828 | NSP3 | hCoV-19/USA/ID-IBL-841132/2022 | S | 848 | K | 2 | 20220728 |
| EPI_ISL_8193598 | NSP3 | hCoV-19/Egypt/NRC-6658/2020 | S | 848 | insKL | 4 | 20200910 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | S | 848 | insstop | 1 | 20220804 |
| EPI_ISL_16314964 | NSP3 | hCoV-19/USA/ID-IBL-869334/2022 | I | 849 | R | 3 | 20221213 |
| EPI_ISL_14288003 | NSP3 | hCoV-19/USA/ID-IBL-839390/2022 | I | 849 | S | 2 | 20220723 |
| EPI_ISL_19826781 | NSP3 | hCoV-19/USA/MN-MDH-46644/2025 | I | 849 | V | 543 | 20250327 |
| EPI_ISL_14224102 | NSP3 | hCoV-19/USA/ID-IBL-835609/2022 | I | 849 | stop | 26 | 20220708 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | I | 849 | P | 2 | 20221226 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | I | 849 | F | 22 | 20231218 |
| EPI_ISL_5070922 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46980/2021 | I | 849 | insILPLHCstopHSN | 1 | 20210526 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | I | 849 | M | 8 | 20230925 |
| EPI_ISL_16137531 | NSP3 | hCoV-19/USA/ID-IBL-867288/2022 | I | 849 | N | 6 | 20221121 |
| EPI_ISL_12617604 | NSP3 | hCoV-19/USA/ID-IBL-719657/2021 | I | 849 | Q | 1 | 20210327 |
| EPI_ISL_13044587 | NSP3 | hCoV-19/USA/ID-IBL-822052/2022 | I | 849 | insH | 1 | 20220523 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | I | 849 | insstopMGRstop | 8 | 20211227 |
| EPI_ISL_8193601 | NSP3 | hCoV-19/Egypt/NRC-6641/2020 | I | 849 | K | 4 | 20200910 |
| EPI_ISL_15927005 | NSP3 | hCoV-19/Bangladesh/icddrb-SV025/2022 | I | 849 | insGXX | 214 | 20221010 |
| EPI_ISL_13812265 | NSP3 | hCoV-19/USA/ID-IBL-831343/2022 | I | 849 | insstopstop | 1 | 20220623 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | I | 849 | D | 2 | 20230412 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | I | 849 | del | 221 | 20240904 |
| EPI_ISL_4435667 | NSP3 | hCoV-19/India/DL-NCDC-3009119/2021 | I | 849 | insGVGXXX | 1 | 20210423 |
| EPI_ISL_10765954 | NSP3 | hCoV-19/Thailand/NIC_SNI_SEQ5600/2022 | I | 849 | insGVGNTH | 1 | 20220108 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | I | 849 | insYX | 1 | 20231218 |
| EPI_ISL_2695902 | NSP3 | hCoV-19/USA/AZ-ASPHL-2205/2021 | I | 849 | insYstopMGRstop | 1 | 20210427 |
| EPI_ISL_19507700 | NSP3 | hCoV-19/Italy/LOM-UNIBS-09264259/2024 | I | 849 | L | 70 | 20240926 |
| EPI_ISL_11860407 | NSP3 | hCoV-19/Israel/ICH-741209539/2022 | I | 849 | insGVEIPTSXX | 16 | 20220319 |
| EPI_ISL_19507699 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10124026/2024 | I | 849 | J | 3 | 20241012 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | I | 849 | Y | 38 | 20240307 |
| EPI_ISL_7547073 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100721-1038/2021 | I | 849 | insstop | 1 | 20211007 |
| EPI_ISL_17591915 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3175/2023 | I | 849 | insT | 1 | 20230417 |
| EPI_ISL_13812270 | NSP3 | hCoV-19/USA/ID-IBL-831535/2022 | I | 849 | C | 4 | 20220624 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | I | 849 | G | 1 | 20210403 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | I | 849 | T | 260 | 20230507 |
| EPI_ISL_16137531 | NSP3 | hCoV-19/USA/ID-IBL-867288/2022 | K | 850 | V | 13 | 20221121 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | K | 850 | A | 3 | 20240307 |
| EPI_ISL_19662011 | NSP3 | hCoV-19/Spain/PV-HUD-74438062/2024 | K | 850 | N | 356 | 20241220 |
| EPI_ISL_19210622 | NSP3 | hCoV-19/USA/NY-NYULH-19756/2024 | K | 850 | E | 73 | 20240616 |
| EPI_ISL_16282819 | NSP3 | hCoV-19/Spain/PV-HUB-56892083/2022 | K | 850 | T | 45 | 20221206 |
| EPI_ISL_12845158 | NSP3 | hCoV-19/Bangladesh/BSMMU_Laila_280/2021 | K | 850 | Y | 2 | 20210726 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | K | 850 | H | 2 | 20230925 |
| EPI_ISL_15415377 | NSP3 | hCoV-19/USA/ID-IBL-858084/2022 | K | 850 | stop | 50 | 20221003 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 850 | F | 2 | 20230104 |
| EPI_ISL_14333832 | NSP3 | hCoV-19/USA/ID-IBL-841146/2022 | K | 850 | S | 3 | 20220728 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | K | 850 | L | 26 | 20240123 |
| EPI_ISL_18657126 | NSP3 | hCoV-19/Australia/SA1046145/2023 | K | 850 | I | 54 | 20231205 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | K | 850 | W | 2 | 20220728 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | K | 850 | del | 234 | 20240904 |
| EPI_ISL_8546995 | NSP3 | hCoV-19/Israel/ICH-741112373/2022 | K | 850 | G | 14 | 20220102 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | K | 850 | M | 2 | 20210803 |
| EPI_ISL_19531508 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YRW8Q/2024 | K | 850 | R | 380 | 20241017 |
| EPI_ISL_19066376 | NSP3 | hCoV-19/Finland/THL-02158/2024 | K | 850 | Q | 30 | 20240224 |
| EPI_ISL_8546995 | NSP3 | hCoV-19/Israel/ICH-741112373/2022 | K | 850 | insVEIPTSstop | 5 | 20220102 |
| EPI_ISL_11860460 | NSP3 | hCoV-19/Israel/ICH-741209538/2022 | W | 851 | K | 1 | 20220319 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | W | 851 | insVGTCQHstopITLK | 1 | 20210622 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | W | 851 | insstop | 1 | 20210803 |
| EPI_ISL_19042002 | NSP3 | hCoV-19/Lithuania/MB231117_0014/2023 | W | 851 | L | 46 | 20231115 |
| EPI_ISL_19082459 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140275/2024 | W | 851 | S | 4 | 20240307 |
| EPI_ISL_16517813 | NSP3 | hCoV-19/Japan/OPHO-Hb23-1978-2/2023 | W | 851 | T | 2 | 20230106 |
| EPI_ISL_12845158 | NSP3 | hCoV-19/Bangladesh/BSMMU_Laila_280/2021 | W | 851 | A | 1 | 20210726 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | W | 851 | D | 2 | 20240307 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | W | 851 | N | 1 | 20240123 |
| EPI_ISL_16405274 | NSP3 | hCoV-19/France/ARA-HCL022212342101/2022 | W | 851 | R | 28 | 20221219 |
| EPI_ISL_8452488 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-K9/2021 | W | 851 | Y | 1 | 20211224 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | W | 851 | V | 3 | 20210803 |
| EPI_ISL_17034848 | NSP3 | hCoV-19/Italy/LOM-ASST-69301957/2023 | W | 851 | stop | 11 | 20230220 |
| EPI_ISL_19713554 | NSP3 | hCoV-19/Canada/AB-ABPHL-130977/2025 | W | 851 | G | 26 | 20250122 |
| EPI_ISL_19363607 | NSP3 | hCoV-19/Japan/FR004-0295/2024 | W | 851 | C | 37 | 20240809 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | W | 851 | insFstopLA | 1 | 20210813 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | W | 851 | F | 4 | 20221226 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | W | 851 | H | 1 | 20221024 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | W | 851 | I | 2 | 20220121 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | W | 851 | del | 243 | 20240904 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | W | 851 | E | 1 | 20220628 |
| EPI_ISL_14881059 | NSP3 | hCoV-19/USA/ID-IBL-846234/2022 | W | 851 | M | 42 | 20220816 |
| EPI_ISL_9785227 | NSP3 | hCoV-19/England/LSPA-356254B/2022 | W | 851 | Q | 1 | 20220201 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | A | 852 | stop | 1 | 20220812 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | A | 852 | H | 2 | 20240123 |
| EPI_ISL_17972641 | NSP3 | hCoV-19/USA/IL-629002/2023 | A | 852 | P | 4 | 20230628 |
| EPI_ISL_9248705 | NSP3 | hCoV-19/Thailand/Bangkok-RAMA-CMG-0205/2022 | A | 852 | R | 1 | 20220106 |
| EPI_ISL_16814946 | NSP3 | hCoV-19/United Arab Emirates/BTC-6092/2021 | A | 852 | N | 1 | 20210627 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | A | 852 | F | 9 | 20220131 |
| EPI_ISL_17972838 | NSP3 | hCoV-19/USA/AZ-ASU103561/2023 | A | 852 | G | 45 | 20230628 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 852 | del | 230 | 20240904 |
| EPI_ISL_17674251 | NSP3 | hCoV-19/USA/NJ-CDC-LC1041174/2023 | A | 852 | E | 74 | 20230502 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 852 | M | 1 | 20230108 |
| EPI_ISL_18759553 | NSP3 | hCoV-19/USA/LA-EVTL20717/2023 | A | 852 | S | 148 | 20231218 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | A | 852 | insRstopQLL | 1 | 20210802 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | A | 852 | L | 45 | 20221226 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | A | 852 | K | 3 | 20230412 |
| EPI_ISL_19708079 | NSP3 | hCoV-19/USA/IA-SHL-2568684/2025 | A | 852 | V | 2253 | 20250126 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | A | 852 | Q | 19 | 20240307 |
| EPI_ISL_19821123 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11207/2025 | A | 852 | T | 1202 | 20250316 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | D | 853 | P | 4 | 20221024 |
| EPI_ISL_8187710 | NSP3 | hCoV-19/Chile/LR-195566/2021 | D | 853 | insXX | 1 | 20211217 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | D | 853 | S | 19 | 20221226 |
| EPI_ISL_19541394 | NSP3 | hCoV-19/Italy/LAZ-UCBM-2024-24/2024 | D | 853 | Y | 193 | 20241002 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 853 | K | 1 | 20210318 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | D | 853 | Q | 1 | 20210909 |
| EPI_ISL_19729291 | NSP3 | hCoV-19/Japan/FR011-0051/2025 | D | 853 | N | 217 | 20250129 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | D | 853 | del | 238 | 20240904 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | D | 853 | I | 1 | 20230412 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | D | 853 | stop | 5 | 20220628 |
| EPI_ISL_18762869 | NSP3 | hCoV-19/Netherlands/OV-RIVM-135987/2023 | D | 853 | B | 20 | 20231219 |
| EPI_ISL_12754223 | NSP3 | hCoV-19/USA/MS-MSPHL-327/2021 | D | 853 | insFLM | 1 | 20210324 |
| EPI_ISL_19738886 | NSP3 | hCoV-19/USA/VA-VCUVAS3-UZJI820586/2025 | D | 853 | G | 382 | 20250205 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | D | 853 | L | 12 | 20240307 |
| EPI_ISL_8985780 | NSP3 | hCoV-19/Poland/PL_P228/2022 | D | 853 | C | 7 | 20220112 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | D | 853 | V | 6 | 20240123 |
| EPI_ISL_14595839 | NSP3 | hCoV-19/India/KA-CBR-6379/2021 | D | 853 | H | 4 | 20211021 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | D | 853 | E | 27 | 20230420 |
| EPI_ISL_8409206 | NSP3 | hCoV-19/Israel/ICH-741110297/2021 | D | 853 | insR | 1 | 20211229 |
| EPI_ISL_19710955 | NSP3 | hCoV-19/Brazil/CE-FIOCRUZ-FCE315/2024 | D | 853 | A | 499 | 20241203 |
| EPI_ISL_14881059 | NSP3 | hCoV-19/USA/ID-IBL-846234/2022 | D | 853 | R | 40 | 20220816 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | N | 854 | insI | 1 | 20220509 |
| EPI_ISL_19662182 | NSP3 | hCoV-19/Singapore/R65MQ126/2024 | N | 854 | D | 91 | 20241129 |
| EPI_ISL_11964970 | NSP3 | hCoV-19/Germany/SN-RKI-I-700807/2022 | N | 854 | Y | 4 | 20220326 |
| EPI_ISL_8098827 | NSP3 | hCoV-19/Israel/ICH-741106160/2021 | N | 854 | R | 2 | 20211216 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | N | 854 | G | 1 | 20230104 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | N | 854 | E | 1 | 20221226 |
| EPI_ISL_17552795 | NSP3 | hCoV-19/Japan/PG-470676/2022 | N | 854 | insXXX | 1 | 20220405 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | N | 854 | H | 5 | 20240123 |
| EPI_ISL_19712462 | NSP3 | hCoV-19/Japan/FR004-0033/2025 | N | 854 | S | 161 | 20250106 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | N | 854 | F | 4 | 20220131 |
| EPI_ISL_8193601 | NSP3 | hCoV-19/Egypt/NRC-6641/2020 | N | 854 | insLL | 3 | 20200910 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | N | 854 | I | 1 | 20210909 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | N | 854 | T | 16 | 20221024 |
| EPI_ISL_15335535 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N28/2022 | N | 854 | K | 28 | 20220811 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | N | 854 | del | 225 | 20240904 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 854 | L | 19 | 20230108 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | N | 854 | A | 1 | 20240307 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 854 | V | 1 | 20220210 |
| EPI_ISL_18936251 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00147/2023 | N | 854 | stop | 37 | 20230420 |
| EPI_ISL_17432112 | NSP3 | hCoV-19/Singapore/R22MR543/2023 | N | 854 | B | 10 | 20230326 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | N | 854 | C | 19 | 20221226 |
| EPI_ISL_18236161 | NSP3 | hCoV-19/USA/GA-ROAPS-0333/2021 | N | 854 | insML | 1 | 20210823 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | N | 855 | K | 7 | 20221224 |
| EPI_ISL_5070922 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46980/2021 | N | 855 | L | 1 | 20210526 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | N | 855 | G | 8 | 20221201 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | N | 855 | T | 11 | 20230412 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | N | 855 | H | 28 | 20230217 |
| EPI_ISL_14567337 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SJH-536212/2022 | N | 855 | B | 4 | 20220627 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | N | 855 | V | 1 | 20220110 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 855 | M | 13 | 20230108 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | N | 855 | Y | 4 | 20220131 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | N | 855 | P | 1 | 20240307 |
| EPI_ISL_19775338 | NSP3 | hCoV-19/Germany/BW-RKI-I-1147884/2025 | N | 855 | S | 74 | 20250218 |
| EPI_ISL_8098827 | NSP3 | hCoV-19/Israel/ICH-741106160/2021 | N | 855 | insR | 2 | 20211216 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | N | 855 | del | 46 | 20240904 |
| EPI_ISL_19140720 | NSP3 | hCoV-19/Pakistan/CHL304330/2024 | N | 855 | stop | 2 | 20240123 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | N | 855 | R | 2 | 20221024 |
| EPI_ISL_16984798 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-44789/2022 | N | 855 | D | 3 | 20221221 |
| EPI_ISL_9224234 | NSP3 | hCoV-19/Israel/ICH-741115086/2022 | N | 855 | insXX | 1 | 20220120 |
| EPI_ISL_18385484 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482893/2023 | N | 855 | I | 5 | 20231004 |
| EPI_ISL_14881059 | NSP3 | hCoV-19/USA/ID-IBL-846234/2022 | N | 855 | Q | 35 | 20220816 |
| EPI_ISL_2695990 | NSP3 | hCoV-19/USA/AZ-ASPHL-1155/2020 | N | 855 | insYRQLSCH | 1 | 20200612 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 855 | F | 2 | 20220210 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | C | 856 | L | 43 | 20230217 |
| EPI_ISL_8409206 | NSP3 | hCoV-19/Israel/ICH-741110297/2021 | C | 856 | insGNXXXXXXXXX | 2 | 20211229 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | C | 856 | I | 2 | 20230412 |
| EPI_ISL_18439273 | NSP3 | hCoV-19/South Korea/KDCA268859/2023 | C | 856 | F | 17 | 20230922 |
| EPI_ISL_15310318 | NSP3 | hCoV-19/Mexico/QUE_CIAD-IMSS_202201102492/2022 | C | 856 | S | 15 | 20220914 |
| EPI_ISL_10149347 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-346191/2022 | C | 856 | N | 2 | 20220210 |
| EPI_ISL_17813682 | NSP3 | hCoV-19/Cabo Verde/BR-0002/2023 | C | 856 | R | 16 | 20230510 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | C | 856 | del | 62 | 20240904 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | C | 856 | K | 1 | 20201004 |
| EPI_ISL_15765419 | NSP3 | hCoV-19/Russia/YAR-RII-MH104323S/2022 | C | 856 | Y | 5 | 20221014 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | C | 856 | insstopHSNKstopSstopSLIH | 2 | 20220121 |
| EPI_ISL_12754223 | NSP3 | hCoV-19/USA/MS-MSPHL-327/2021 | C | 856 | insRKVFR | 1 | 20210324 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | C | 856 | A | 2 | 20220110 |
| EPI_ISL_18690243 | NSP3 | hCoV-19/USA/TX-HMH-M-136274/2023 | C | 856 | G | 212 | 20231211 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | C | 856 | P | 1 | 20240307 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 856 | H | 6 | 20220210 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | C | 856 | W | 3 | 20220804 |
| EPI_ISL_16517813 | NSP3 | hCoV-19/Japan/OPHO-Hb23-1978-2/2023 | C | 856 | stop | 7 | 20230106 |
| EPI_ISL_12412632 | NSP3 | hCoV-19/France/PAC-HMN-22042040564/2022 | C | 856 | insXX | 1 | 20220321 |
| EPI_ISL_15320861 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N11/2022 | C | 856 | V | 5 | 20220809 |
| EPI_ISL_15293857 | NSP3 | hCoV-19/India/GA-NCCS-617053975/2021 | C | 856 | M | 1 | 20211226 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | C | 856 | Q | 1 | 20221226 |
| EPI_ISL_19710383 | NSP3 | hCoV-19/Netherlands/NH-RIVM-144993/2025 | Y | 857 | H | 91 | 20250106 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 857 | L | 42 | 20230108 |
| EPI_ISL_17467994 | NSP3 | hCoV-19/USA/CA-CDPH-500107109/2023 | Y | 857 | F | 10 | 20230222 |
| EPI_ISL_17304893 | NSP3 | hCoV-19/USA/TX-HMH-M-127227/2023 | Y | 857 | I | 27 | 20230315 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | Y | 857 | M | 5 | 20220131 |
| EPI_ISL_16815331 | NSP3 | hCoV-19/United Arab Emirates/BTC-6940/2021 | Y | 857 | insRQstop | 2 | 20210729 |
| EPI_ISL_7945875 | NSP3 | hCoV-19/USA/CA-CDC-ASC210654240/2021 | Y | 857 | insCY | 1 | 20211126 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 857 | N | 2 | 20240307 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 857 | insK | 1 | 20230108 |
| EPI_ISL_18690243 | NSP3 | hCoV-19/USA/TX-HMH-M-136274/2023 | Y | 857 | Q | 227 | 20231211 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | Y | 857 | R | 1 | 20210813 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | Y | 857 | K | 5 | 20220209 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Y | 857 | del | 39 | 20240904 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 857 | S | 1 | 20220210 |
| EPI_ISL_1730440 | NSP3 | hCoV-19/England/OXON-F7E0D1/2021 | Y | 857 | A | 1 | 20210317 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | Y | 857 | insIN | 1 | 20210803 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | Y | 857 | T | 1 | 20220110 |
| EPI_ISL_18651398 | NSP3 | hCoV-19/USA/IA-SHL-2373619/2023 | Y | 857 | C | 75 | 20231204 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Y | 857 | insHstopIT | 1 | 20230104 |
| EPI_ISL_922205 | NSP3 | hCoV-19/England/OXON-F4FA44/2021 | Y | 857 | insstop | 1 | 20210107 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | Y | 857 | stop | 4 | 20230217 |
| EPI_ISL_13648104 | NSP3 | hCoV-19/Spain/AS-252237734/2022 | L | 858 | H | 2 | 20220623 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | L | 858 | E | 1 | 20230217 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | L | 858 | M | 1 | 20201004 |
| EPI_ISL_1167125 | NSP3 | hCoV-19/Senegal/SN-MBO-201859/2021 | L | 858 | insA | 1 | 20210127 |
| EPI_ISL_12584139 | NSP3 | hCoV-19/Turkey/HSGM-GS2981/2022 | L | 858 | P | 1 | 20220407 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | L | 858 | F | 12 | 20240307 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 858 | T | 1 | 20220509 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 858 | C | 2 | 20210318 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | L | 858 | S | 38 | 20230418 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | L | 858 | G | 4 | 20220131 |
| EPI_ISL_17323607 | NSP3 | hCoV-19/Taiwan/CDC-F79104/2023 | L | 858 | V | 31 | 20230223 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | L | 858 | A | 1 | 20200729 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 858 | del | 38 | 20240904 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | L | 858 | stop | 1 | 20210813 |
| EPI_ISL_18381653 | NSP3 | hCoV-19/Canada/BC-BCCDC-652983/2023 | L | 858 | J | 17 | 20230923 |
| EPI_ISL_19664427 | NSP3 | hCoV-19/USA/MN-MDH-45077/2024 | L | 858 | I | 460 | 20241226 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 859 | del | 46 | 20240904 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | A | 859 | Q | 2 | 20220509 |
| EPI_ISL_14881059 | NSP3 | hCoV-19/USA/ID-IBL-846234/2022 | A | 859 | C | 38 | 20220816 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | A | 859 | N | 24 | 20221226 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | A | 859 | insstopF | 1 | 20210403 |
| EPI_ISL_5923229 | NSP3 | hCoV-19/Senegal/SN-IRVAC-016/2021 | A | 859 | insTALLTLQQIELKYLA | 1 | 20210716 |
| EPI_ISL_19615208 | NSP3 | hCoV-19/Japan/FR016-0268/2024 | A | 859 | S | 70 | 20241010 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | A | 859 | L | 7 | 20230418 |
| EPI_ISL_19323972 | NSP3 | hCoV-19/USA/MS-MSPHL-0271/2024 | A | 859 | P | 12 | 20240723 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | A | 859 | F | 1 | 20210726 |
| EPI_ISL_19781724 | NSP3 | hCoV-19/USA/CT-DPH-1278034001/2025 | A | 859 | T | 591 | 20250212 |
| EPI_ISL_10858520 | NSP3 | hCoV-19/Turkey/HSGM-G2424/2022 | A | 859 | I | 4 | 20220217 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | A | 859 | M | 6 | 20230217 |
| EPI_ISL_3421684 | NSP3 | hCoV-19/Wales/OXON-FA6FC4/2020 | A | 859 | stop | 1 | 20201126 |
| EPI_ISL_1078628 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-24074/2021 | A | 859 | G | 2 | 20210116 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | A | 859 | R | 5 | 20220131 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | A | 859 | H | 1 | 20221226 |
| EPI_ISL_19721468 | NSP3 | hCoV-19/USA/WI-WSLH-2403287/2024 | A | 859 | V | 45 | 20241206 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | A | 859 | K | 3 | 20240307 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | A | 859 | Y | 2 | 20220121 |
| EPI_ISL_14228490 | NSP3 | hCoV-19/India/OR-ILSGS18375/2022 | A | 859 | D | 6 | 20220514 |
| EPI_ISL_19822278 | NSP3 | hCoV-19/USA/CA-GBW-GKPLAAAA40076/2025 | T | 860 | N | 363 | 20250330 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | T | 860 | F | 1 | 20210803 |
| EPI_ISL_18575140 | NSP3 | hCoV-19/Italy/SIC-AOUME-UOSD-GCL-5055/2022 | T | 860 | P | 6 | 20220906 |
| EPI_ISL_19732626 | NSP3 | hCoV-19/Canada/ON-PHL-202503377/2025 | T | 860 | A | 528 | 20250203 |
| EPI_ISL_14881059 | NSP3 | hCoV-19/USA/ID-IBL-846234/2022 | T | 860 | H | 5 | 20220816 |
| EPI_ISL_18727248 | NSP3 | hCoV-19/England/CLIMB-CM7YG87X/2023 | T | 860 | S | 38 | 20231223 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 860 | L | 7 | 20240307 |
| EPI_ISL_19802087 | NSP3 | hCoV-19/USA/CA-PFZ04715/2025 | T | 860 | I | 1506 | 20250301 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | T | 860 | Y | 2 | 20220602 |
| EPI_ISL_18111927 | NSP3 | hCoV-19/Australia/QLD0x0136D8/2023 | T | 860 | V | 10 | 20230801 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 860 | D | 1 | 20211006 |
| EPI_ISL_11887243 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0543/2021 | T | 860 | G | 2 | 20211218 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | T | 860 | K | 2 | 20220121 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | T | 860 | R | 3 | 20220117 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | T | 860 | del | 51 | 20240904 |
| EPI_ISL_17372428 | NSP3 | hCoV-19/India/TN-SPHL-2864/2023 | T | 860 | stop | 6 | 20230303 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | T | 860 | M | 2 | 20230217 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | A | 861 | M | 2 | 20220121 |
| EPI_ISL_16524404 | NSP3 | hCoV-19/Italy/LOM-ASST-69264237/2023 | A | 861 | C | 7 | 20230109 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | A | 861 | G | 8 | 20230418 |
| EPI_ISL_17714032 | NSP3 | hCoV-19/Mexico/CMX_InDRE_FB2862/2023 | A | 861 | L | 8 | 20230327 |
| EPI_ISL_19823306 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4174411/2025 | A | 861 | S | 6356 | 20250311 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | A | 861 | F | 1 | 20221226 |
| EPI_ISL_8099015 | NSP3 | hCoV-19/Israel/ICH-741106466/2021 | A | 861 | insXX | 1 | 20211216 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | A | 861 | stop | 8 | 20220209 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | A | 861 | E | 2 | 20240307 |
| EPI_ISL_2190932 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-32298/2020 | A | 861 | I | 1 | 20201221 |
| EPI_ISL_19826773 | NSP3 | hCoV-19/USA/MN-MDH-46636/2025 | A | 861 | V | 11136 | 20250330 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | A | 861 | Q | 5 | 20220131 |
| EPI_ISL_5072620 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-47257/2021 | A | 861 | H | 2 | 20210601 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 861 | del | 50 | 20240904 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | A | 861 | K | 6 | 20220602 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | A | 861 | P | 22 | 20211227 |
| EPI_ISL_19824721 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-031908/2025 | A | 861 | T | 963 | 20250326 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | A | 861 | N | 2 | 20230217 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | A | 861 | R | 2 | 20220628 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 862 | stop | 3 | 20230108 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 862 | A | 2 | 20221226 |
| EPI_ISL_19826739 | NSP3 | hCoV-19/USA/MN-MDH-46602/2025 | L | 862 | F | 1839 | 20250330 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 862 | E | 2 | 20220210 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 862 | del | 82 | 20240904 |
| EPI_ISL_8555533 | NSP3 | hCoV-19/USA/NJ-CDC-ASC210557136/2021 | L | 862 | W | 17 | 20211227 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 862 | N | 2 | 20230104 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | L | 862 | Q | 4 | 20230418 |
| EPI_ISL_15320932 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N13/2022 | L | 862 | Y | 1 | 20220812 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | L | 862 | P | 1 | 20220703 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | L | 862 | T | 24 | 20221226 |
| EPI_ISL_7941759 | NSP3 | hCoV-19/USA/TN-CDC-ASC210429273/2021 | L | 862 | G | 2 | 20211123 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | L | 862 | K | 1 | 20230217 |
| EPI_ISL_14986576 | NSP3 | hCoV-19/India/KA-SLS-40314/2022 | L | 862 | S | 5 | 20220719 |
| EPI_ISL_19373300 | NSP3 | hCoV-19/env/Germany/BY-LGL-6318264/2024 | L | 862 | I | 265 | 20240617 |
| EPI_ISL_18351990 | NSP3 | hCoV-19/USA/MS-MSPHL-0747/2023 | L | 862 | M | 16 | 20230918 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 862 | D | 2 | 20220509 |
| EPI_ISL_19480196 | NSP3 | hCoV-19/Canada/BC-BCCDC-736983/2024 | L | 862 | V | 78 | 20240920 |
| EPI_ISL_13871245 | NSP3 | hCoV-19/USA/ID-IBL-833301/2022 | L | 862 | H | 3 | 20220630 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | L | 862 | C | 2 | 20220628 |
| EPI_ISL_2215474 | NSP3 | hCoV-19/Netherlands/OV-RIVM-32515/2021 | L | 863 | P | 2 | 20210426 |
| EPI_ISL_19459321 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16235/2024 | L | 863 | del | 109 | 20240731 |
| EPI_ISL_18281141 | NSP3 | hCoV-19/Spain/AB-HGUA-60739887/2023 | L | 863 | S | 4 | 20230823 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | L | 863 | R | 1 | 20220117 |
| EPI_ISL_15252637 | NSP3 | hCoV-19/Spain/AS-252275735/2022 | L | 863 | G | 2 | 20220920 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | L | 863 | Q | 1 | 20240307 |
| EPI_ISL_1075563 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-21119/2021 | L | 863 | insPLHCX | 1 | 20210101 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | L | 863 | I | 11 | 20230418 |
| EPI_ISL_17427534 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2859/2023 | L | 863 | insR | 1 | 20230401 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 863 | T | 8 | 20230104 |
| EPI_ISL_18255148 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-08/2023 | L | 863 | insP | 9 | 20230316 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | L | 863 | W | 1 | 20210419 |
| EPI_ISL_12291367 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1100/2022 | L | 863 | K | 1 | 20220114 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | L | 863 | insstop | 1 | 20201004 |
| EPI_ISL_17372402 | NSP3 | hCoV-19/India/TN-SPHL-2827/2023 | L | 863 | V | 12 | 20230227 |
| EPI_ISL_2383165 | NSP3 | hCoV-19/USA/LA-EVTL2873/2021 | L | 863 | J | 3 | 20210519 |
| EPI_ISL_19323972 | NSP3 | hCoV-19/USA/MS-MSPHL-0271/2024 | L | 863 | stop | 6 | 20240723 |
| EPI_ISL_15659052 | NSP3 | hCoV-19/USA/ID-IBL-860429/2022 | L | 863 | N | 32 | 20221017 |
| EPI_ISL_18936204 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00049/2023 | L | 863 | M | 3 | 20230411 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 863 | Y | 2 | 20230217 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 863 | F | 4 | 20230108 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | T | 864 | R | 24 | 20240904 |
| EPI_ISL_19750479 | NSP3 | hCoV-19/Italy/MAR_UNIVPM_Marche_32723-18-11-24_WG/2024 | T | 864 | A | 474 | 20241118 |
| EPI_ISL_14986576 | NSP3 | hCoV-19/India/KA-SLS-40314/2022 | T | 864 | J | 1 | 20220719 |
| EPI_ISL_18690243 | NSP3 | hCoV-19/USA/TX-HMH-M-136274/2023 | T | 864 | P | 236 | 20231211 |
| EPI_ISL_19323588 | NSP3 | hCoV-19/env/Germany/BY-LGL-6304457/2024 | T | 864 | K | 7 | 20240724 |
| EPI_ISL_5072620 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-47257/2021 | T | 864 | H | 1 | 20210601 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | T | 864 | V | 1 | 20230217 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | T | 864 | Y | 1 | 20210403 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | T | 864 | N | 15 | 20220703 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | T | 864 | del | 52 | 20231013 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 864 | Q | 2 | 20240307 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | T | 864 | S | 9 | 20230217 |
| EPI_ISL_19829146 | NSP3 | hCoV-19/USA/PA-CDC-LC1136436/2025 | T | 864 | I | 15284 | 20250402 |
| EPI_ISL_17682077 | NSP3 | hCoV-19/Libya/421067100/2020 | T | 864 | G | 1 | 20200611 |
| EPI_ISL_5383883 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-48827/2020 | T | 864 | insP | 1 | 20200715 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 864 | insRA | 1 | 20211006 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | T | 864 | L | 7 | 20221226 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | L | 865 | T | 13 | 20230418 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | L | 865 | del | 40 | 20231013 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 865 | M | 4 | 20220509 |
| EPI_ISL_19797337 | NSP3 | hCoV-19/Finland/THL-01460/2025 | L | 865 | F | 1340 | 20250203 |
| EPI_ISL_19042025 | NSP3 | hCoV-19/Lithuania/MB231215_0025/2023 | L | 865 | J | 34 | 20231212 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | L | 865 | R | 3 | 20220703 |
| EPI_ISL_3235368 | NSP3 | hCoV-19/Mexico/YUC-NYGC-1051-SM-2/2021 | L | 865 | insHCstopL | 1 | 20210311 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 865 | K | 3 | 20230104 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 865 | V | 167 | 20240904 |
| EPI_ISL_5072620 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-47257/2021 | L | 865 | S | 1 | 20210601 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | L | 865 | E | 2 | 20220121 |
| EPI_ISL_18980991 | NSP3 | hCoV-19/USA/TX-HMH-M-140059/2024 | L | 865 | P | 6 | 20240227 |
| EPI_ISL_19521688 | NSP3 | hCoV-19/USA/TX-PHH-CS-04340/2024 | L | 865 | I | 2066 | 20241002 |
| EPI_ISL_15377031 | NSP3 | hCoV-19/USA/ID-IBL-857444/2022 | L | 865 | insHstopH | 1 | 20220928 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | L | 865 | insHCstopHS | 2 | 20210916 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | L | 865 | insHCstopHSNKstopSstop | 2 | 20210927 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | L | 865 | C | 6 | 20220131 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | L | 865 | N | 5 | 20220209 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | L | 865 | stop | 2 | 20230217 |
| EPI_ISL_13304569 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-10588/2022 | L | 865 | A | 1 | 20220531 |
| EPI_ISL_18833260 | NSP3 | hCoV-19/Israel/SMC-7116696/2024 | Q | 866 | N | 10 | 20240116 |
| EPI_ISL_5049890 | NSP3 | hCoV-19/Spain/CT-LabRefCat-524671/2021 | Q | 866 | stop | 3 | 20210714 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Q | 866 | M | 2 | 20230101 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | Q | 866 | F | 1 | 20210701 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | Q | 866 | V | 5 | 20230418 |
| EPI_ISL_18936163 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00114/2023 | Q | 866 | P | 7 | 20230417 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | Q | 866 | insstop | 1 | 20210419 |
| EPI_ISL_18936204 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00049/2023 | Q | 866 | Y | 4 | 20230411 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | Q | 866 | H | 53 | 20230214 |
| EPI_ISL_18825522 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69573193/2024 | Q | 866 | R | 7 | 20240117 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | Q | 866 | insN | 1 | 20211231 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | Q | 866 | G | 5 | 20220209 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 866 | T | 3 | 20240307 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | Q | 866 | insCstopHSN | 1 | 20210813 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | Q | 866 | insCstopHSNKstopSstopS | 1 | 20210121 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | Q | 866 | del | 43 | 20231013 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Q | 866 | E | 19 | 20240904 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Q | 866 | L | 7 | 20230104 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | Q | 866 | S | 6 | 20230217 |
| EPI_ISL_13625127 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-102570/2022 | Q | 866 | K | 7 | 20220623 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | Q | 867 | L | 13 | 20230217 |
| EPI_ISL_18936163 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00114/2023 | Q | 867 | T | 7 | 20230417 |
| EPI_ISL_5072620 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-47257/2021 | Q | 867 | insstopSstopSL | 2 | 20210601 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | Q | 867 | I | 3 | 20230418 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | Q | 867 | E | 4 | 20220703 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | Q | 867 | C | 45 | 20230214 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Q | 867 | stop | 7 | 20230108 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Q | 867 | A | 1 | 20240904 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | Q | 867 | S | 2 | 20230217 |
| EPI_ISL_16157832 | NSP3 | hCoV-19/Chile/RM-131982/2022 | Q | 867 | Y | 5 | 20221127 |
| EPI_ISL_19031475 | NSP3 | hCoV-19/South Korea/KDCA289701/2024 | Q | 867 | H | 23 | 20240305 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Q | 867 | M | 2 | 20230104 |
| EPI_ISL_11895073 | NSP3 | hCoV-19/Brazil/BA-LACEN-BA1226-292119269/2022 | Q | 867 | N | 3 | 20220117 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 867 | V | 17 | 20240307 |
| EPI_ISL_18936199 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00041/2023 | Q | 867 | R | 10 | 20230408 |
| EPI_ISL_19365702 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-144665/2024 | Q | 867 | K | 25 | 20240811 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | Q | 867 | del | 47 | 20231013 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 867 | G | 3 | 20220210 |
| EPI_ISL_19784508 | NSP3 | hCoV-19/Australia/QLD0x01537B/2025 | I | 868 | L | 334 | 20250224 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | I | 868 | G | 4 | 20220602 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | I | 868 | del | 48 | 20231013 |
| EPI_ISL_12694400 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471731/2022 | I | 868 | H | 1 | 20220126 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | I | 868 | F | 2 | 20240904 |
| EPI_ISL_19416658 | NSP3 | hCoV-19/Croatia/HZJZ_7858/2024 | I | 868 | M | 251 | 20240830 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | I | 868 | N | 5 | 20221226 |
| EPI_ISL_17021244 | NSP3 | hCoV-19/Chile/RM-199370/2021 | I | 868 | Y | 1 | 20211227 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | I | 868 | A | 12 | 20220620 |
| EPI_ISL_16214872 | NSP3 | hCoV-19/Denmark/DCGC-626166/2022 | I | 868 | T | 28 | 20221214 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 868 | K | 70 | 20230108 |
| EPI_ISL_18579541 | NSP3 | hCoV-19/Lithuania/MB1031_0139/2023 | I | 868 | J | 9 | 20231024 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | I | 868 | stop | 54 | 20230214 |
| EPI_ISL_18301815 | NSP3 | hCoV-19/Italy/LOM-69468829/2023 | I | 868 | R | 7 | 20230914 |
| EPI_ISL_19826020 | NSP3 | hCoV-19/Singapore/Y25R15MSC51/2025 | I | 868 | V | 335 | 20250407 |
| EPI_ISL_11895073 | NSP3 | hCoV-19/Brazil/BA-LACEN-BA1226-292119269/2022 | E | 869 | W | 1 | 20220117 |
| EPI_ISL_15546615 | NSP3 | hCoV-19/USA/NC-CDC-QDX42511258/2022 | E | 869 | Q | 13 | 20221013 |
| EPI_ISL_15629526 | NSP3 | hCoV-19/England/LSPA-325C716E/2022 | E | 869 | Z | 9 | 20221020 |
| EPI_ISL_13826249 | NSP3 | hCoV-19/Austria/LB-R00087-S366/2022 | E | 869 | stop | 5 | 20220708 |
| EPI_ISL_8806438 | NSP3 | hCoV-19/India/GA-NCCS-C56751/2021 | E | 869 | insSNKstop | 1 | 20210707 |
| EPI_ISL_19408688 | NSP3 | hCoV-19/Italy/LOM-UNIBS-09059712/2024 | E | 869 | V | 37 | 20240827 |
| EPI_ISL_19650478 | NSP3 | hCoV-19/Spain/CU-33432/2024 | E | 869 | D | 1725 | 20241003 |
| EPI_ISL_16510322 | NSP3 | hCoV-19/Chile/RM-265/2023 | E | 869 | Y | 3 | 20230103 |
| EPI_ISL_19620362 | NSP3 | hCoV-19/Canada/ON-PHL-202423991/2024 | E | 869 | K | 56 | 20241204 |
| EPI_ISL_10951240 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9192/2022 | E | 869 | P | 2 | 20220210 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | E | 869 | L | 2 | 20220602 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | E | 869 | S | 19 | 20230217 |
| EPI_ISL_18483540 | NSP3 | hCoV-19/Chile/VS-80210/2023 | E | 869 | del | 41 | 20231013 |
| EPI_ISL_19785073 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13784/2024 | E | 869 | A | 59 | 20241202 |
| EPI_ISL_6125400 | NSP3 | hCoV-19/Japan/20210815-33422/2021 | E | 869 | R | 2 | 20210815 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | E | 869 | N | 11 | 20221226 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | E | 869 | C | 1 | 20240307 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | E | 869 | H | 43 | 20230217 |
| EPI_ISL_3544843 | NSP3 | hCoV-19/South Korea/KDCA8458/2021 | E | 869 | M | 1 | 20210804 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | E | 869 | insRY | 1 | 20221226 |
| EPI_ISL_11321913 | NSP3 | hCoV-19/Israel/SMC-7046716/2022 | E | 869 | insLDQTVVHMSLTCPQ | 1 | 20220215 |
| EPI_ISL_18937402 | NSP3 | hCoV-19/USA/CA-GBW-H20-357-0762/2024 | E | 869 | G | 33 | 20240206 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | E | 869 | T | 4 | 20220209 |
| EPI_ISL_18301840 | NSP3 | hCoV-19/Italy/LOM-69468825/2023 | L | 870 | stop | 14 | 20230913 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 870 | T | 18 | 20230217 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 870 | Q | 1 | 20211006 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 870 | D | 2 | 20221226 |
| EPI_ISL_1725126 | NSP3 | hCoV-19/Germany/NW-RKI-I-088602/2021 | L | 870 | R | 1 | 20210406 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | L | 870 | H | 2 | 20240307 |
| EPI_ISL_16510322 | NSP3 | hCoV-19/Chile/RM-265/2023 | L | 870 | M | 5 | 20230103 |
| EPI_ISL_5049884 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649437/2021 | L | 870 | P | 1 | 20210803 |
| EPI_ISL_11887243 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0543/2021 | L | 870 | C | 1 | 20211218 |
| EPI_ISL_12694400 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471731/2022 | L | 870 | N | 1 | 20220126 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | L | 870 | insstop | 1 | 20210804 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | L | 870 | K | 4 | 20220121 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | L | 870 | Y | 1 | 20221226 |
| EPI_ISL_19251760 | NSP3 | hCoV-19/Japan/FR047-0275/2024 | L | 870 | V | 67 | 20240604 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 870 | del | 34 | 20240904 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | L | 870 | I | 1 | 20210804 |
| EPI_ISL_18036815 | NSP3 | hCoV-19/USA/WA-GBW-H10-016-0912/2023 | L | 870 | S | 44 | 20230714 |
| EPI_ISL_19691775 | NSP3 | hCoV-19/Canada/ON-PHL-202502083/2025 | L | 870 | F | 105 | 20250116 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | K | 871 | T | 2 | 20230217 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | K | 871 | A | 3 | 20221226 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | K | 871 | S | 12 | 20230217 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | K | 871 | del | 45 | 20240904 |
| EPI_ISL_19333132 | NSP3 | hCoV-19/Italy/SIC-AOUME-UOSD-GCL-5319/2024 | K | 871 | Q | 135 | 20240807 |
| EPI_ISL_19032953 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6393/2024 | K | 871 | E | 9 | 20240130 |
| EPI_ISL_19021284 | NSP3 | hCoV-19/Pakistan/KMU_PHRL-1228/2024 | K | 871 | M | 7 | 20240323 |
| EPI_ISL_12291367 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1100/2022 | K | 871 | stop | 5 | 20220114 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | K | 871 | G | 1 | 20210726 |
| EPI_ISL_14204643 | NSP3 | hCoV-19/Brazil/SP-IB_RP26268/2020 | K | 871 | Y | 2 | 20200908 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | K | 871 | C | 15 | 20240307 |
| EPI_ISL_19600422 | NSP3 | hCoV-19/USA/CA-CDPH-6000021023/2024 | K | 871 | N | 63 | 20240922 |
| EPI_ISL_6125400 | NSP3 | hCoV-19/Japan/20210815-33422/2021 | K | 871 | V | 4 | 20210815 |
| EPI_ISL_19816804 | NSP3 | hCoV-19/Slovenia/IMI-V0-1917/2025 | K | 871 | R | 440 | 20250324 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | K | 871 | H | 1 | 20221224 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | K | 871 | L | 7 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 871 | F | 1 | 20220210 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | F | 872 | W | 1 | 20221226 |
| EPI_ISL_16447649 | NSP3 | hCoV-19/Italy/LOM-ASST-69257683/2023 | F | 872 | I | 5 | 20230102 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | F | 872 | A | 2 | 20210730 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | F | 872 | S | 20 | 20240307 |
| EPI_ISL_19351685 | NSP3 | hCoV-19/Netherlands/UT-RIVM-140488/2024 | F | 872 | Y | 25 | 20240722 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | F | 872 | K | 36 | 20230214 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | F | 872 | T | 2 | 20230217 |
| EPI_ISL_17957753 | NSP3 | hCoV-19/India/UP-ILSGS21205/2023 | F | 872 | C | 3 | 20230422 |
| EPI_ISL_19696895 | NSP3 | hCoV-19/Tunisia/CNH-9251/2024 | F | 872 | L | 95 | 20241002 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | F | 872 | del | 42 | 20240904 |
| EPI_ISL_18690107 | NSP3 | hCoV-19/USA/TX-HMH-M-136386/2023 | F | 872 | V | 21 | 20231215 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | F | 872 | insTGHK | 1 | 20211006 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | F | 872 | D | 2 | 20221226 |
| EPI_ISL_12694400 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471731/2022 | F | 872 | stop | 4 | 20220126 |
| EPI_ISL_18747150 | NSP3 | hCoV-19/USA/IL-S23WGS1676/2023 | N | 873 | H | 45 | 20230826 |
| EPI_ISL_19616294 | NSP3 | hCoV-19/France/GES-RELAB-IPP13019/2024 | N | 873 | K | 200 | 20241112 |
| EPI_ISL_18651909 | NSP3 | hCoV-19/Malaysia/UNIMAS-B19956/2023 | N | 873 | T | 83 | 20231207 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | N | 873 | del | 42 | 20240904 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | N | 873 | stop | 37 | 20230214 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | N | 873 | Q | 2 | 20230217 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | N | 873 | V | 1 | 20210726 |
| EPI_ISL_19379793 | NSP3 | hCoV-19/USA/MO-MSPHL-009761/2024 | N | 873 | Y | 57 | 20240811 |
| EPI_ISL_18215428 | NSP3 | hCoV-19/France/NAQ-HCL723000964701/2023 | N | 873 | I | 14 | 20230814 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 873 | A | 1 | 20210318 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | N | 873 | L | 6 | 20240307 |
| EPI_ISL_5070922 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46980/2021 | N | 873 | insTFVHLSstop | 1 | 20210526 |
| EPI_ISL_19414478 | NSP3 | hCoV-19/Israel/SMC-7118326/2024 | N | 873 | D | 427 | 20240826 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | N | 873 | insFVHLSstop | 2 | 20220121 |
| EPI_ISL_13911578 | NSP3 | hCoV-19/USA/FL-CDC-LC0758524/2022 | N | 873 | G | 2 | 20220628 |
| EPI_ISL_19780718 | NSP3 | hCoV-19/USA/PA-DHSS-1237/2025 | N | 873 | S | 499 | 20250302 |
| EPI_ISL_19181394 | NSP3 | hCoV-19/Singapore/R32MQ111/2024 | N | 873 | B | 5 | 20240527 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | P | 874 | H | 4 | 20230217 |
| EPI_ISL_18820159 | NSP3 | hCoV-19/Croatia/HZJZ_6664/2023 | P | 874 | T | 198 | 20231222 |
| EPI_ISL_18971180 | NSP3 | hCoV-19/USA/IL-RIPHL_32765_G/2024 | P | 874 | A | 10 | 20240212 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 874 | N | 1 | 20210318 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | P | 874 | M | 3 | 20230217 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | P | 874 | del | 46 | 20240904 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | P | 874 | stop | 4 | 20221226 |
| EPI_ISL_11326419 | NSP3 | hCoV-19/France/IDF-ChVe-21465903/2021 | P | 874 | R | 15 | 20211120 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | P | 874 | I | 1 | 20221226 |
| EPI_ISL_19773058 | NSP3 | hCoV-19/USA/NY-CDC-LC1134288/2025 | P | 874 | L | 461 | 20250224 |
| EPI_ISL_1640191 | NSP3 | hCoV-19/Germany/SN-RKI-I-073802/2021 | P | 874 | K | 2 | 20210402 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 874 | E | 1 | 20211006 |
| EPI_ISL_19826005 | NSP3 | hCoV-19/Singapore/Y25R15MSC61/2025 | P | 874 | S | 10335 | 20250407 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | P | 874 | insstopHSNKstopS | 1 | 20210628 |
| EPI_ISL_17022641 | NSP3 | hCoV-19/Chile/VS-96094/2021 | P | 874 | V | 1 | 20210516 |
| EPI_ISL_18443868 | NSP3 | hCoV-19/Slovenia/18995/2023 | P | 874 | Q | 16 | 20231017 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | P | 874 | C | 1 | 20211231 |
| EPI_ISL_11326419 | NSP3 | hCoV-19/France/IDF-ChVe-21465903/2021 | P | 875 | C | 16 | 20211120 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 875 | N | 1 | 20210318 |
| EPI_ISL_19819851 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YG98I/2025 | P | 875 | H | 201 | 20250322 |
| EPI_ISL_3544843 | NSP3 | hCoV-19/South Korea/KDCA8458/2021 | P | 875 | V | 1 | 20210804 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | P | 875 | del | 48 | 20240904 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | P | 875 | E | 1 | 20210726 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | P | 875 | Q | 1 | 20240307 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | P | 875 | R | 41 | 20220703 |
| EPI_ISL_18226323 | NSP3 | hCoV-19/env/India/MH-FMR_B7-51b/2023 | P | 875 | insV | 1 | 20230227 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | P | 875 | stop | 40 | 20230214 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 875 | Y | 1 | 20211006 |
| EPI_ISL_19707323 | NSP3 | hCoV-19/Canada/NS-NSH-765251/2025 | P | 875 | L | 1057 | 20250112 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | P | 875 | A | 1 | 20221226 |
| EPI_ISL_19827964 | NSP3 | hCoV-19/USA/CA-CDPH-500146130/2025 | P | 875 | T | 36 | 20250127 |
| EPI_ISL_19412879 | NSP3 | hCoV-19/France/IDF-IPP09805/2024 | P | 875 | S | 331 | 20240825 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 875 | I | 1 | 20220210 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | A | 876 | R | 1 | 20230217 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | A | 876 | K | 2 | 20240307 |
| EPI_ISL_14881054 | NSP3 | hCoV-19/USA/ID-IBL-846130/2022 | A | 876 | stop | 1 | 20220815 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 876 | Q | 1 | 20211006 |
| EPI_ISL_19537235 | NSP3 | hCoV-19/Italy/SIC-AOUP-UNIPA_109248/2024 | A | 876 | T | 14 | 20241011 |
| EPI_ISL_19828893 | NSP3 | hCoV-19/Italy/LOM_Unimi-2321-25/2024 | A | 876 | S | 396 | 20241212 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 876 | del | 50 | 20240904 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | A | 876 | P | 3 | 20230217 |
| EPI_ISL_11326419 | NSP3 | hCoV-19/France/IDF-ChVe-21465903/2021 | A | 876 | L | 16 | 20211120 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | A | 876 | Y | 1 | 20220509 |
| EPI_ISL_18648278 | NSP3 | hCoV-19/Brazil/MS-FIOCRUZ-12923/2023 | A | 876 | G | 7 | 20231116 |
| EPI_ISL_19507700 | NSP3 | hCoV-19/Italy/LOM-UNIBS-09264259/2024 | A | 876 | D | 34 | 20240926 |
| EPI_ISL_19345452 | NSP3 | hCoV-19/USA/CA-LACPHL-AY07691/2024 | A | 876 | V | 322 | 20240805 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | A | 876 | N | 1 | 20230217 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | A | 876 | C | 3 | 20220703 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | A | 876 | I | 3 | 20210801 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | A | 876 | insRCL | 1 | 20211231 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 876 | insAPPASMMVF | 1 | 20211006 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 877 | G | 1 | 20220210 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | L | 877 | T | 5 | 20210806 |
| EPI_ISL_7509775 | NSP3 | hCoV-19/USA/CA-CSMC669/2020 | L | 877 | S | 3 | 20200910 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | L | 877 | A | 1 | 20230217 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 877 | del | 58 | 20240904 |
| EPI_ISL_19701359 | NSP3 | hCoV-19/Spain/AS-HUCA-232505635/2025 | L | 877 | I | 112 | 20250120 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | L | 877 | V | 6 | 20221224 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 877 | H | 1 | 20210318 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | L | 877 | C | 1 | 20221226 |
| EPI_ISL_19719106 | NSP3 | hCoV-19/Hungary/103117-UPL25-000503/2024 | L | 877 | P | 11 | 20241129 |
| EPI_ISL_13125333 | NSP3 | hCoV-19/USA/ID-IBL-650332/2020 | L | 877 | Y | 1 | 20200901 |
| EPI_ISL_17849169 | NSP3 | hCoV-19/Canada/ON-PHL-23-26150/2023 | L | 877 | J | 11 | 20230619 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 877 | R | 2 | 20230217 |
| EPI_ISL_12291367 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1100/2022 | L | 877 | stop | 1 | 20220114 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | L | 877 | D | 1 | 20240307 |
| EPI_ISL_14333832 | NSP3 | hCoV-19/USA/ID-IBL-841146/2022 | L | 877 | M | 2 | 20220728 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | Q | 878 | P | 1 | 20230217 |
| EPI_ISL_19507700 | NSP3 | hCoV-19/Italy/LOM-UNIBS-09264259/2024 | Q | 878 | H | 10 | 20240926 |
| EPI_ISL_14912971 | NSP3 | hCoV-19/Australia/NSW-ICPMR-32930/2022 | Q | 878 | R | 14 | 20220825 |
| EPI_ISL_16397417 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-120898/2022 | Q | 878 | E | 7 | 20221222 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | Q | 878 | S | 4 | 20221226 |
| EPI_ISL_19335377 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143295/2024 | Q | 878 | K | 10 | 20240723 |
| EPI_ISL_5923236 | NSP3 | hCoV-19/Senegal/SN-IR1-0074232/2021 | Q | 878 | insDAYYRARAGEKFNPPALQ | 1 | 20211025 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Q | 878 | G | 1 | 20221226 |
| EPI_ISL_18927725 | NSP3 | hCoV-19/USA/TX-HMH-M-139322/2024 | Q | 878 | stop | 18 | 20240211 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Q | 878 | del | 64 | 20240904 |
| EPI_ISL_19349165 | NSP3 | hCoV-19/USA/TX-HMH-M-144268/2024 | Q | 878 | L | 16 | 20240802 |
| EPI_ISL_16599636 | NSP3 | hCoV-19/USA/TX-HMH-122953/2023 | Q | 878 | I | 40 | 20230109 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | Q | 878 | N | 2 | 20221226 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Q | 878 | D | 2 | 20220509 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 878 | A | 1 | 20240307 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | Q | 878 | T | 3 | 20210813 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 878 | W | 1 | 20210318 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | D | 879 | Q | 6 | 20220703 |
| EPI_ISL_19507700 | NSP3 | hCoV-19/Italy/LOM-UNIBS-09264259/2024 | D | 879 | V | 9 | 20240926 |
| EPI_ISL_19813407 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56806/2025 | D | 879 | E | 205 | 20250317 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | D | 879 | insstopVSstop | 3 | 20220121 |
| EPI_ISL_5887465 | NSP3 | hCoV-19/Chile/RM-USS-UNAB-ALZ515/2021 | D | 879 | insXXXXXXXXX | 1 | 20211008 |
| EPI_ISL_16599636 | NSP3 | hCoV-19/USA/TX-HMH-122953/2023 | D | 879 | H | 44 | 20230109 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | D | 879 | C | 2 | 20210806 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | D | 879 | del | 67 | 20240904 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | D | 879 | T | 2 | 20230217 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | D | 879 | R | 4 | 20210813 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | D | 879 | F | 1 | 20221226 |
| EPI_ISL_10314631 | NSP3 | hCoV-19/Belarus/MA-CRIE-7713246577/2021 | D | 879 | A | 1 | 20210929 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | D | 879 | L | 1 | 20210114 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | D | 879 | W | 1 | 20240307 |
| EPI_ISL_17703846 | NSP3 | hCoV-19/Australia/SA538230/2023 | D | 879 | N | 4 | 20230502 |
| EPI_ISL_16982319 | NSP3 | hCoV-19/USA/NJ-GBW-H20-278-7580/2023 | D | 879 | Y | 13 | 20230208 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | D | 879 | G | 4 | 20220509 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | D | 879 | K | 2 | 20221226 |
| EPI_ISL_15452708 | NSP3 | hCoV-19/Singapore/13401/2022 | D | 879 | B | 3 | 20221015 |
| EPI_ISL_12529728 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-Vijaya-142230706/2022 | D | 879 | I | 1 | 20220419 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | D | 879 | S | 13 | 20211231 |
| EPI_ISL_16408477 | NSP3 | hCoV-19/USA/AZ-ASU94518/2022 | A | 880 | G | 5 | 20220803 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | A | 880 | K | 16 | 20240307 |
| EPI_ISL_13700468 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-102845/2022 | A | 880 | F | 2 | 20220625 |
| EPI_ISL_17427534 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2859/2023 | A | 880 | I | 2 | 20230401 |
| EPI_ISL_19724909 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015672/2024 | A | 880 | S | 163 | 20241208 |
| EPI_ISL_15724700 | NSP3 | hCoV-19/Turkey/KSS-KSS4872510899/2022 | A | 880 | D | 3 | 20221101 |
| EPI_ISL_14881054 | NSP3 | hCoV-19/USA/ID-IBL-846130/2022 | A | 880 | Q | 2 | 20220815 |
| EPI_ISL_19566561 | NSP3 | hCoV-19/Germany/BE-ChVirD24-23051/2024 | A | 880 | V | 88 | 20241020 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | A | 880 | C | 2 | 20210813 |
| EPI_ISL_12291367 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1100/2022 | A | 880 | P | 1 | 20220114 |
| EPI_ISL_17988442 | NSP3 | hCoV-19/Spain/GA-SCQ-178930/2023 | A | 880 | T | 17 | 20230508 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | A | 880 | N | 1 | 20220321 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 880 | del | 60 | 20240904 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | A | 880 | M | 2 | 20221226 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | A | 880 | L | 47 | 20230217 |
| EPI_ISL_19334623 | NSP3 | hCoV-19/Egypt/CPHL-EGY24141/2024 | Y | 881 | N | 43 | 20240623 |
| EPI_ISL_19507696 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10149703/2024 | Y | 881 | S | 5 | 20240925 |
| EPI_ISL_16314855 | NSP3 | hCoV-19/France/BRE-CHUP-8600234542/2022 | Y | 881 | F | 11 | 20221219 |
| EPI_ISL_8049923 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6860/2021 | Y | 881 | K | 1 | 20211008 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 881 | T | 2 | 20220210 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Y | 881 | D | 4 | 20220509 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | Y | 881 | P | 2 | 20230217 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | Y | 881 | M | 3 | 20220121 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | Y | 881 | H | 5 | 20230217 |
| EPI_ISL_16424010 | NSP3 | hCoV-19/Turkey/KSS-PFOADH4910990493/2022 | Y | 881 | stop | 5 | 20221205 |
| EPI_ISL_19496072 | NSP3 | hCoV-19/env/Germany/BY-LGL-6342388/2024 | Y | 881 | del | 65 | 20241002 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 881 | Q | 1 | 20211006 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | Y | 881 | G | 13 | 20211231 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | Y | 881 | L | 47 | 20230217 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 881 | I | 3 | 20240307 |
| EPI_ISL_12321607 | NSP3 | hCoV-19/Turkey/HSGM-GS2457/2022 | Y | 881 | C | 7 | 20220405 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | Y | 881 | V | 3 | 20230217 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | Y | 882 | N | 3 | 20220923 |
| EPI_ISL_8525757 | NSP3 | hCoV-19/Senegal/63646/2020 | Y | 882 | G | 4 | 20200612 |
| EPI_ISL_17022641 | NSP3 | hCoV-19/Chile/VS-96094/2021 | Y | 882 | K | 3 | 20210516 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | Y | 882 | W | 13 | 20211231 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Y | 882 | V | 4 | 20220509 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | Y | 882 | del | 67 | 20230605 |
| EPI_ISL_8525752 | NSP3 | hCoV-19/Senegal/62835/2020 | Y | 882 | R | 3 | 20200611 |
| EPI_ISL_12319886 | NSP3 | hCoV-19/Turkey/HSGM-GS1475/2022 | Y | 882 | D | 5 | 20220401 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | Y | 882 | H | 7 | 20230214 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | Y | 882 | T | 3 | 20230217 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | Y | 882 | L | 9 | 20231218 |
| EPI_ISL_19334600 | NSP3 | hCoV-19/Egypt/CPHL-EGY24146/2024 | Y | 882 | S | 3 | 20240623 |
| EPI_ISL_13282077 | NSP3 | hCoV-19/USA/ID-IBL-656843/2020 | Y | 882 | I | 1 | 20200915 |
| EPI_ISL_12291367 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1100/2022 | Y | 882 | Q | 3 | 20220114 |
| EPI_ISL_18833260 | NSP3 | hCoV-19/Israel/SMC-7116696/2024 | Y | 882 | F | 9 | 20240116 |
| EPI_ISL_19363866 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14022/2024 | Y | 882 | stop | 5 | 20240329 |
| EPI_ISL_12321574 | NSP3 | hCoV-19/Turkey/HSGM-GS2662/2022 | Y | 882 | C | 5 | 20220405 |
| EPI_ISL_16414480 | NSP3 | hCoV-19/Turkey/KSS-SBU4926001110/2022 | R | 883 | stop | 15 | 20221219 |
| EPI_ISL_18896332 | NSP3 | hCoV-19/Germany/SH-RKI-I-1141978/2023 | R | 883 | K | 578 | 20231229 |
| EPI_ISL_11949080 | NSP3 | hCoV-19/England/DHSC-CYY1YHS/2021 | R | 883 | insKVEELGLDISGELPCVL | 1 | 20211221 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | R | 883 | N | 2 | 20221226 |
| EPI_ISL_19831424 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56925/2025 | R | 883 | S | 400 | 20250325 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | R | 883 | H | 4 | 20240904 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | R | 883 | L | 3 | 20230217 |
| EPI_ISL_16314969 | NSP3 | hCoV-19/USA/ID-IBL-870466/2022 | R | 883 | E | 6 | 20221212 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | R | 883 | M | 1 | 20210114 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | R | 883 | T | 11 | 20240307 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | R | 883 | Q | 10 | 20230217 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | R | 883 | del | 50 | 20230605 |
| EPI_ISL_19741605 | NSP3 | hCoV-19/Japan/FR302-0150/2025 | R | 883 | G | 377 | 20250122 |
| EPI_ISL_19317183 | NSP3 | hCoV-19/USA/DE-CDC-LC1111370/2024 | R | 883 | I | 33 | 20240724 |
| EPI_ISL_12145125 | NSP3 | hCoV-19/Turkey/HSGM-3GS1285/2022 | A | 884 | E | 2 | 20220312 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | A | 884 | M | 43 | 20230217 |
| EPI_ISL_19437647 | NSP3 | hCoV-19/South Africa/NICD-N58609/2024 | A | 884 | S | 218 | 20240627 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | A | 884 | L | 5 | 20240307 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | A | 884 | R | 1 | 20221226 |
| EPI_ISL_17763440 | NSP3 | hCoV-19/Finland/THL-05608/2023 | A | 884 | G | 5 | 20230521 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | A | 884 | insIKPH | 1 | 20220509 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 884 | T | 29 | 20240904 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | A | 884 | I | 2 | 20230217 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | A | 884 | stop | 2 | 20221024 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | A | 884 | Q | 1 | 20210806 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | A | 884 | C | 1 | 20230217 |
| EPI_ISL_19734890 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17334386/2025 | A | 884 | P | 3 | 20250209 |
| EPI_ISL_10858427 | NSP3 | hCoV-19/Turkey/HSGM-G2233/2022 | A | 884 | V | 7 | 20220217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 884 | D | 1 | 20220210 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | A | 884 | K | 5 | 20220509 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | A | 884 | del | 41 | 20230605 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 884 | Y | 1 | 20211006 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 885 | V | 1 | 20220210 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | R | 885 | L | 44 | 20230217 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | R | 885 | G | 7 | 20240307 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | R | 885 | N | 6 | 20220509 |
| EPI_ISL_16400682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1116/2022 | R | 885 | stop | 2 | 20221226 |
| EPI_ISL_17427534 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2859/2023 | R | 885 | E | 3 | 20230401 |
| EPI_ISL_19507696 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10149703/2024 | R | 885 | S | 27 | 20240925 |
| EPI_ISL_19146747 | NSP3 | hCoV-19/England/CLIMB-CM7YGIYN/2024 | R | 885 | K | 79 | 20240506 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | R | 885 | del | 57 | 20230605 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | R | 885 | Q | 4 | 20220121 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | R | 885 | I | 1 | 20210114 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | R | 885 | insITEQG | 1 | 20210803 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | R | 885 | H | 1 | 20230217 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | R | 885 | W | 3 | 20230217 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | R | 885 | T | 2 | 20240904 |
| EPI_ISL_1167192 | NSP3 | hCoV-19/Egypt/MASRI-C5-020/2020 | R | 885 | A | 1 | 20200913 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 886 | K | 1 | 20210318 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | A | 886 | C | 1 | 20230214 |
| EPI_ISL_12934193 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111121-1424/2021 | A | 886 | insstop | 1 | 20211111 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 886 | D | 23 | 20240904 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | A | 886 | stop | 3 | 20220121 |
| EPI_ISL_17427534 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2859/2023 | A | 886 | Q | 3 | 20230401 |
| EPI_ISL_8049923 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6860/2021 | A | 886 | H | 1 | 20211008 |
| EPI_ISL_10559899 | NSP3 | hCoV-19/Australia/VIC405/2020 | A | 886 | P | 1 | 20200324 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | A | 886 | del | 56 | 20230605 |
| EPI_ISL_17089369 | NSP3 | hCoV-19/USA/ID-IBL-876194/2023 | A | 886 | L | 9 | 20230214 |
| EPI_ISL_3756621 | NSP3 | hCoV-19/USA/ID-IBL-744725/2021 | A | 886 | W | 1 | 20210802 |
| EPI_ISL_15865392 | NSP3 | hCoV-19/Russia/MOW-PMVL-DZ-14439483080/2022 | A | 886 | T | 10 | 20220630 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | A | 886 | I | 43 | 20230217 |
| EPI_ISL_18327284 | NSP3 | hCoV-19/South Africa/ZARV-NHLS-0057/2023 | A | 886 | V | 154 | 20230608 |
| EPI_ISL_18689847 | NSP3 | hCoV-19/Brazil/GO-HLAGYN-2390125/2023 | A | 886 | S | 66 | 20231026 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | A | 886 | N | 1 | 20240307 |
| EPI_ISL_1167192 | NSP3 | hCoV-19/Egypt/MASRI-C5-020/2020 | A | 886 | E | 1 | 20200913 |
| EPI_ISL_2650086 | NSP3 | hCoV-19/USA/AZ-ASPHL-1395/2020 | A | 886 | insWstopSCstopLLXXXXSLLstopstopX | 1 | 20200625 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | A | 886 | R | 5 | 20220627 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | A | 886 | G | 20 | 20220628 |
| EPI_ISL_12584019 | NSP3 | hCoV-19/Turkey/HSGM-GS2971/2022 | G | 887 | E | 4 | 20220407 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | G | 887 | insstop | 1 | 20210815 |
| EPI_ISL_19827286 | NSP3 | hCoV-19/Chile/RM-ISPC-23852/2025 | G | 887 | S | 717 | 20250319 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 887 | Y | 2 | 20220210 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | G | 887 | T | 41 | 20230217 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | G | 887 | del | 61 | 20240904 |
| EPI_ISL_3806770 | NSP3 | hCoV-19/Brazil/RS-LMM62337/2021 | G | 887 | L | 21 | 20210813 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | G | 887 | insT | 1 | 20210825 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | G | 887 | R | 4 | 20230217 |
| EPI_ISL_15337967 | NSP3 | hCoV-19/env/USA/CA-SEARCH-206370/2022 | G | 887 | D | 62 | 20220814 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | G | 887 | stop | 1 | 20230214 |
| EPI_ISL_12146248 | NSP3 | hCoV-19/Turkey/HSGM-GS1616/2022 | G | 887 | A | 122 | 20220401 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | G | 887 | W | 7 | 20220628 |
| EPI_ISL_19732545 | NSP3 | hCoV-19/Canada/ON-PHL-202503290/2025 | G | 887 | C | 159 | 20250201 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | G | 887 | Q | 2 | 20210806 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | G | 887 | insstopGL | 1 | 20200803 |
| EPI_ISL_9409249 | NSP3 | hCoV-19/Turkey/HSGM-F17467/2022 | G | 887 | M | 1 | 20220112 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | G | 887 | V | 23 | 20240307 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | G | 887 | H | 2 | 20230217 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | E | 888 | C | 1 | 20221024 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | E | 888 | del | 57 | 20240904 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | E | 888 | T | 4 | 20220121 |
| EPI_ISL_13413796 | NSP3 | hCoV-19/USA/ID-IBL-612426/2020 | E | 888 | insGLstop | 1 | 20200322 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | E | 888 | F | 1 | 20230217 |
| EPI_ISL_17427534 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2859/2023 | E | 888 | L | 1 | 20230401 |
| EPI_ISL_14165339 | NSP3 | hCoV-19/England/QEUH-3F080C4/2022 | E | 888 | Z | 5 | 20220718 |
| EPI_ISL_12427672 | NSP3 | hCoV-19/USA/WI-UW-10404/2022 | E | 888 | V | 38 | 20220406 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | E | 888 | A | 25 | 20230214 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 888 | I | 1 | 20211006 |
| EPI_ISL_12320575 | NSP3 | hCoV-19/Turkey/HSGM-GS2204/2022 | E | 888 | G | 5 | 20220410 |
| EPI_ISL_19651418 | NSP3 | hCoV-19/Brazil/RS-FIOCRUZ-12733/2024 | E | 888 | D | 559 | 20241116 |
| EPI_ISL_19507696 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10149703/2024 | E | 888 | Q | 6 | 20240925 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | E | 888 | R | 2 | 20230217 |
| EPI_ISL_18731510 | NSP3 | hCoV-19/USA/NY-GBW-H20-332-2605/2023 | E | 888 | K | 44 | 20231227 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | E | 888 | S | 5 | 20230217 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | E | 888 | stop | 11 | 20220628 |
| EPI_ISL_19408683 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA11884-P0/2024 | A | 889 | S | 120 | 20240825 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | A | 889 | Y | 1 | 20230217 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | A | 889 | C | 5 | 20220121 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | A | 889 | insTL | 1 | 20221226 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | A | 889 | E | 1 | 20221024 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | A | 889 | Q | 39 | 20230217 |
| EPI_ISL_12321607 | NSP3 | hCoV-19/Turkey/HSGM-GS2457/2022 | A | 889 | T | 34 | 20220405 |
| EPI_ISL_19757293 | NSP3 | hCoV-19/Australia/QLD-PHV-FSS-151F2/2025 | A | 889 | V | 183 | 20250129 |
| EPI_ISL_19536684 | NSP3 | hCoV-19/England/CLIMB-CM7YEYOJ/2024 | A | 889 | G | 129 | 20241030 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 889 | N | 1 | 20211006 |
| EPI_ISL_17725043 | NSP3 | hCoV-19/Shanghai/SCDC-HG0518-826/2023 | A | 889 | D | 2 | 20230516 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 889 | del | 61 | 20240904 |
| EPI_ISL_9409249 | NSP3 | hCoV-19/Turkey/HSGM-F17467/2022 | A | 889 | R | 3 | 20220112 |
| EPI_ISL_19335377 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143295/2024 | A | 889 | P | 4 | 20240723 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 889 | L | 9 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 889 | K | 2 | 20210318 |
| EPI_ISL_19613035 | NSP3 | hCoV-19/Spain/MD-HGUGM-65072961/2024 | A | 890 | P | 18 | 20241123 |
| EPI_ISL_17022641 | NSP3 | hCoV-19/Chile/VS-96094/2021 | A | 890 | insV | 1 | 20210516 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | A | 890 | C | 7 | 20221226 |
| EPI_ISL_18742836 | NSP3 | hCoV-19/USA/CA-OC-4768/2023 | A | 890 | G | 148 | 20231121 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 890 | R | 1 | 20211006 |
| EPI_ISL_10515189 | NSP3 | hCoV-19/Argentina/UW21060415553/2021 | A | 890 | N | 14 | 20210604 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | A | 890 | E | 1 | 20230214 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | A | 890 | insLVKLL | 1 | 20210716 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | A | 890 | W | 2 | 20220703 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | A | 890 | Y | 9 | 20240307 |
| EPI_ISL_12109029 | NSP3 | hCoV-19/USA/TX-HMH-96432/2022 | A | 890 | stop | 6 | 20220403 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | A | 890 | F | 3 | 20220121 |
| EPI_ISL_14180185 | NSP3 | hCoV-19/USA/TX-HMH-M-108821/2022 | A | 890 | L | 24 | 20220722 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 890 | Q | 2 | 20220210 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 890 | M | 1 | 20230217 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | A | 890 | del | 60 | 20230605 |
| EPI_ISL_19638682 | NSP3 | hCoV-19/Canada/ON-PHL-202425559/2024 | A | 890 | D | 748603 | 20241218 |
| EPI_ISL_19600234 | NSP3 | hCoV-19/USA/CA-CDPH-500143187/2024 | A | 890 | V | 534 | 20240910 |
| EPI_ISL_5073244 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-47699/2021 | A | 890 | insLVKLXXXX | 1 | 20210625 |
| EPI_ISL_19796038 | NSP3 | hCoV-19/Denmark/DCGC-692016/2025 | A | 890 | S | 537 | 20250303 |
| EPI_ISL_2787408 | NSP3 | hCoV-19/USA/WY-CDC-2-4543952/2021 | A | 890 | B | 5 | 20210609 |
| EPI_ISL_19650661 | NSP3 | hCoV-19/Sweden/W-50538076LX/2024 | A | 890 | T | 259 | 20241218 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | A | 890 | K | 5 | 20231218 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | N | 891 | C | 1 | 20211006 |
| EPI_ISL_15992803 | NSP3 | hCoV-19/USA/NC-UNC-8423/2022 | N | 891 | Y | 8 | 20221119 |
| EPI_ISL_19067516 | NSP3 | hCoV-19/USA/NY-URMC-O2S1M088-1/2024 | N | 891 | H | 10 | 20240216 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | N | 891 | L | 37 | 20230217 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | N | 891 | Q | 1 | 20221024 |
| EPI_ISL_3922866 | NSP3 | hCoV-19/USA/ID-IBL-749082/2021 | N | 891 | insP | 1 | 20210813 |
| EPI_ISL_10185453 | NSP3 | hCoV-19/England/PHEP-YYRNUBD/2022 | N | 891 | E | 2 | 20220127 |
| EPI_ISL_19826623 | NSP3 | hCoV-19/USA/NY-PRL-250408_83B01/2025 | N | 891 | S | 417 | 20250330 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | N | 891 | K | 48 | 20240307 |
| EPI_ISL_18440310 | NSP3 | hCoV-19/Spain/CT-LabRefCat-5833987/2023 | N | 891 | B | 8 | 20231004 |
| EPI_ISL_16425691 | NSP3 | hCoV-19/Slovenia/241744/2022 | N | 891 | G | 3 | 20221213 |
| EPI_ISL_19620688 | NSP3 | hCoV-19/Canada/ON-PHL-202424402/2024 | N | 891 | T | 62 | 20241208 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | N | 891 | stop | 7 | 20220703 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | N | 891 | del | 47 | 20231218 |
| EPI_ISL_16015099 | NSP3 | hCoV-19/USA/CO-CDPHE-2103718805/2022 | N | 891 | R | 5 | 20221111 |
| EPI_ISL_19565777 | NSP3 | hCoV-19/USA/CO-CDC-QDX26423025/2024 | N | 891 | D | 143 | 20241104 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | N | 891 | V | 2 | 20230217 |
| EPI_ISL_19810469 | NSP3 | hCoV-19/England/CLIMB-CM7YEJ1A/2025 | N | 891 | I | 8 | 20250308 |
| EPI_ISL_2211253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-38320/2021 | N | 891 | F | 2 | 20210402 |
| EPI_ISL_19694855 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00002/2022 | N | 891 | insF | 1 | 20220101 |
| EPI_ISL_2650086 | NSP3 | hCoV-19/USA/AZ-ASPHL-1395/2020 | F | 892 | stop | 1 | 20200625 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | F | 892 | E | 1 | 20230418 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | F | 892 | N | 2 | 20230217 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | F | 892 | M | 4 | 20230217 |
| EPI_ISL_19227688 | NSP3 | hCoV-19/Singapore/R35MQ61/2024 | F | 892 | V | 58 | 20240603 |
| EPI_ISL_19459312 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16218/2024 | F | 892 | del | 54 | 20240829 |
| EPI_ISL_11887198 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0488/2021 | F | 892 | H | 2 | 20211220 |
| EPI_ISL_18111591 | NSP3 | hCoV-19/South Korea/KDCA257062/2023 | F | 892 | C | 12 | 20230725 |
| EPI_ISL_19826321 | NSP3 | hCoV-19/Canada/ON-KHS-202500857-v1/2025 | F | 892 | L | 629 | 20250328 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | F | 892 | insL | 1 | 20210730 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | F | 892 | Y | 5 | 20221226 |
| EPI_ISL_2775409 | NSP3 | hCoV-19/Brazil/PR-FIOCRUZ-HF163/2021 | F | 892 | W | 1 | 20210302 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | F | 892 | T | 7 | 20230214 |
| EPI_ISL_14461693 | NSP3 | hCoV-19/USA/NY-PRL-220808_01L19/2022 | F | 892 | S | 20 | 20220804 |
| EPI_ISL_19221821 | NSP3 | hCoV-19/France/HDF-IPP06781/2024 | F | 892 | I | 129 | 20240617 |
| EPI_ISL_12934193 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111121-1424/2021 | F | 892 | R | 1 | 20211111 |
| EPI_ISL_456407 | NSP3 | hCoV-19/Iran/wuhan-5-2-1399-205/2020 | F | 892 | P | 1 | 20200415 |
| EPI_ISL_19190409 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15923/2024 | F | 892 | insF | 1 | 20240311 |
| EPI_ISL_8559327 | NSP3 | hCoV-19/Zimbabwe/QIBZIM-71363/2021 | C | 893 | W | 1 | 20211201 |
| EPI_ISL_16814850 | NSP3 | hCoV-19/Spain/AS-232304007/2023 | C | 893 | F | 8 | 20230124 |
| EPI_ISL_18360618 | NSP3 | hCoV-19/Spain/MD-HRYC-72258876/2023 | C | 893 | S | 42 | 20230906 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | C | 893 | Y | 4 | 20220509 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | C | 893 | K | 36 | 20230217 |
| EPI_ISL_12582791 | NSP3 | hCoV-19/Turkey/HSGM-GS1952/2022 | C | 893 | stop | 2 | 20220410 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | C | 893 | Q | 1 | 20200805 |
| EPI_ISL_2650086 | NSP3 | hCoV-19/USA/AZ-ASPHL-1395/2020 | C | 893 | insstopRNN | 1 | 20200625 |
| EPI_ISL_19459314 | NSP3 | hCoV-19/India/MH-ICMR-NIV-243691/2024 | C | 893 | V | 70 | 20240826 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | C | 893 | R | 2 | 20230418 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | C | 893 | T | 2 | 20211222 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | C | 893 | P | 6 | 20230217 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | C | 893 | G | 4 | 20230217 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | C | 893 | L | 23 | 20240904 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | C | 893 | M | 1 | 20210316 |
| EPI_ISL_19425912 | NSP3 | hCoV-19/USA/TX-HMH-M-145453/2024 | C | 893 | del | 44 | 20240824 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | A | 894 | insS | 1 | 20210801 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | A | 894 | I | 4 | 20230217 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 894 | R | 4 | 20230217 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | A | 894 | V | 26 | 20230418 |
| EPI_ISL_19459314 | NSP3 | hCoV-19/India/MH-ICMR-NIV-243691/2024 | A | 894 | H | 74 | 20240826 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | A | 894 | C | 15 | 20230401 |
| EPI_ISL_19425912 | NSP3 | hCoV-19/USA/TX-HMH-M-145453/2024 | A | 894 | del | 43 | 20240824 |
| EPI_ISL_5780277 | NSP3 | hCoV-19/USA/TN-VUMC-000486/2021 | A | 894 | Y | 1 | 20210423 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | A | 894 | K | 10 | 20220620 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | A | 894 | F | 2 | 20211222 |
| EPI_ISL_18295207 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-14700/2023 | A | 894 | T | 16 | 20230821 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 894 | N | 2 | 20220210 |
| EPI_ISL_19617836 | NSP3 | hCoV-19/USA/WI-WSLH-2402984/2024 | A | 894 | S | 44 | 20241104 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | A | 894 | E | 3 | 20220321 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | A | 894 | insNS | 1 | 20210106 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | A | 894 | L | 46 | 20231218 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | A | 894 | insTRCLLQSKGWstopSGstop | 1 | 20220131 |
| EPI_ISL_14248764 | NSP3 | hCoV-19/Israel/ICH-741179060/2022 | A | 894 | P | 1 | 20220723 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 894 | G | 3 | 20240904 |
| EPI_ISL_17089361 | NSP3 | hCoV-19/USA/ID-IBL-875891/2023 | A | 894 | stop | 110 | 20230214 |
| EPI_ISL_18254488 | NSP3 | hCoV-19/France/HDF-IPP17869/2023 | L | 895 | I | 102 | 20230828 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 895 | R | 15 | 20240904 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | L | 895 | A | 2 | 20210319 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | L | 895 | insSstopPT | 1 | 20200814 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 895 | N | 1 | 20211006 |
| EPI_ISL_16369193 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-221222-MM00209R/2022 | L | 895 | J | 21 | 20221222 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | L | 895 | D | 1 | 20230418 |
| EPI_ISL_19460007 | NSP3 | hCoV-19/Canada/AB-ABPHL-123330/2024 | L | 895 | F | 98 | 20240916 |
| EPI_ISL_18226361 | NSP3 | hCoV-19/env/India/MH-FMR_D1-67b/2023 | L | 895 | T | 21 | 20230502 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | L | 895 | K | 3 | 20230217 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | L | 895 | C | 2 | 20230217 |
| EPI_ISL_19425912 | NSP3 | hCoV-19/USA/TX-HMH-M-145453/2024 | L | 895 | del | 47 | 20240824 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | L | 895 | V | 3 | 20230217 |
| EPI_ISL_18295207 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-14700/2023 | L | 895 | Y | 11 | 20230821 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | L | 895 | insHFLMNNLRK | 1 | 20210319 |
| EPI_ISL_17592080 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3032/2023 | L | 895 | S | 10 | 20230408 |
| EPI_ISL_3988122 | NSP3 | hCoV-19/Chile/VS-138520/2021 | L | 895 | M | 1 | 20210812 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | L | 895 | stop | 4 | 20220121 |
| EPI_ISL_19059966 | NSP3 | hCoV-19/env/Ukraine/85568/2024 | L | 895 | P | 5 | 20240318 |
| EPI_ISL_18139463 | NSP3 | hCoV-19/Egypt/CPHL-EGY23966/2022 | L | 895 | H | 3 | 20220815 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | I | 896 | D | 1 | 20210316 |
| EPI_ISL_18873896 | NSP3 | hCoV-19/Sweden/C-03_SE600_400000053754N2/2024 | I | 896 | L | 147 | 20240119 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | I | 896 | R | 3 | 20210803 |
| EPI_ISL_18310352 | NSP3 | hCoV-19/USA/NJ-CDC-LC1060513/2023 | I | 896 | M | 20 | 20230912 |
| EPI_ISL_17492796 | NSP3 | hCoV-19/Anhui/HSCDC-54/2023 | I | 896 | F | 10 | 20230322 |
| EPI_ISL_14253444 | NSP3 | hCoV-19/USA/ID-IBL-837865/2022 | I | 896 | insSLLstopstopDSRstop | 3 | 20220712 |
| EPI_ISL_19425912 | NSP3 | hCoV-19/USA/TX-HMH-M-145453/2024 | I | 896 | del | 54 | 20240824 |
| EPI_ISL_19511259 | NSP3 | hCoV-19/Netherlands/ZH-EMC-8881/2024 | I | 896 | A | 14 | 20240831 |
| EPI_ISL_17685560 | NSP3 | hCoV-19/Germany/BW-RKI-I-1136064/2023 | I | 896 | N | 3 | 20230424 |
| EPI_ISL_19826623 | NSP3 | hCoV-19/USA/NY-PRL-250408_83B01/2025 | I | 896 | T | 7992 | 20250330 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | I | 896 | Y | 34 | 20240904 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | I | 896 | insstop | 1 | 20210817 |
| EPI_ISL_17275291 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45816/2023 | I | 896 | H | 3 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 896 | P | 1 | 20220210 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | I | 896 | G | 1 | 20230418 |
| EPI_ISL_19800151 | NSP3 | hCoV-19/USA/IA-SHL-2600070/2025 | I | 896 | V | 1619 | 20250317 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | I | 896 | insstopstopDSRstop | 1 | 20221226 |
| EPI_ISL_9682271 | NSP3 | hCoV-19/England/ALDP-3521F1D/2022 | I | 896 | J | 2 | 20220201 |
| EPI_ISL_19530213 | NSP3 | hCoV-19/USA/VA-VCUVAS3-RYCK279334/2024 | I | 896 | S | 52 | 20241009 |
| EPI_ISL_12934193 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111121-1424/2021 | I | 896 | E | 1 | 20211111 |
| EPI_ISL_19366036 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-145109/2024 | L | 897 | V | 102 | 20240818 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | L | 897 | A | 1 | 20230217 |
| EPI_ISL_13346221 | NSP3 | hCoV-19/USA/ID-IBL-824804/2022 | L | 897 | insC | 1 | 20220601 |
| EPI_ISL_19228129 | NSP3 | hCoV-19/Singapore/R37MQ161/2024 | L | 897 | I | 38 | 20240603 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | L | 897 | C | 112 | 20220703 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 897 | J | 3 | 20230217 |
| EPI_ISL_19476037 | NSP3 | hCoV-19/USA/CO-CDPHE-42306026/2024 | L | 897 | F | 185 | 20240902 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 897 | M | 3 | 20240904 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | L | 897 | T | 1 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 897 | R | 1 | 20220210 |
| EPI_ISL_8806968 | NSP3 | hCoV-19/India/GA-NCCS-212770124/2021 | L | 897 | H | 1 | 20211004 |
| EPI_ISL_10314921 | NSP3 | hCoV-19/Belarus/HM-CRIE-7724096974/2021 | L | 897 | stop | 5 | 20211217 |
| EPI_ISL_18782878 | NSP3 | hCoV-19/env/Ukraine/83058/2023 | L | 897 | S | 4 | 20231109 |
| EPI_ISL_12934193 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111121-1424/2021 | L | 897 | Q | 1 | 20211111 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 897 | K | 1 | 20210318 |
| EPI_ISL_17022641 | NSP3 | hCoV-19/Chile/VS-96094/2021 | L | 897 | Y | 1 | 20210516 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | L | 897 | del | 53 | 20240712 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | A | 898 | E | 1 | 20230418 |
| EPI_ISL_19635428 | NSP3 | hCoV-19/USA/CO-CDPHE-42590373/2024 | A | 898 | T | 889 | 20241206 |
| EPI_ISL_19348696 | NSP3 | hCoV-19/Morocco/22/2020 | A | 898 | W | 1 | 20201101 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | A | 898 | C | 1 | 20220602 |
| EPI_ISL_11326421 | NSP3 | hCoV-19/France/IDF-ChVe-21470505/2021 | A | 898 | M | 1 | 20211121 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | A | 898 | N | 11 | 20220620 |
| EPI_ISL_12934193 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111121-1424/2021 | A | 898 | G | 2 | 20211111 |
| EPI_ISL_19596476 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS101079/2024 | A | 898 | V | 508 | 20241128 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | A | 898 | L | 5 | 20220627 |
| EPI_ISL_19596481 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS101117/2024 | A | 898 | S | 565 | 20241127 |
| EPI_ISL_16200383 | NSP3 | hCoV-19/India/GJ-GBRC9776/2022 | A | 898 | D | 6 | 20221010 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | A | 898 | P | 7 | 20230217 |
| EPI_ISL_8806968 | NSP3 | hCoV-19/India/GA-NCCS-212770124/2021 | A | 898 | Y | 3 | 20211004 |
| EPI_ISL_17275291 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45816/2023 | A | 898 | stop | 2 | 20230217 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | A | 898 | F | 2 | 20230217 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | A | 898 | Q | 1 | 20210815 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | A | 898 | insT | 1 | 20220602 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | A | 898 | K | 3 | 20230217 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | A | 898 | insKESstopT | 3 | 20220121 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | A | 898 | H | 1 | 20211231 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 898 | R | 8 | 20230217 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | A | 898 | del | 49 | 20240712 |
| EPI_ISL_17275291 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45816/2023 | Y | 899 | R | 1 | 20230217 |
| EPI_ISL_19348696 | NSP3 | hCoV-19/Morocco/22/2020 | Y | 899 | Q | 2 | 20201101 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | Y | 899 | stop | 7 | 20221226 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | Y | 899 | insLstopstopDSXVSstopVMLEKQstopVT | 8 | 20211227 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | Y | 899 | G | 1 | 20230418 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | Y | 899 | L | 29 | 20240712 |
| EPI_ISL_13355473 | NSP3 | hCoV-19/Israel/SMC-7075987/2022 | Y | 899 | D | 3 | 20220612 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | Y | 899 | insLstopstopDSRstopVRKstop | 1 | 20210812 |
| EPI_ISL_11385204 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-49/2022 | Y | 899 | S | 1 | 20220225 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | Y | 899 | N | 2 | 20230217 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | Y | 899 | T | 5 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 899 | F | 8 | 20220210 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Y | 899 | A | 1 | 20240904 |
| EPI_ISL_13818835 | NSP3 | hCoV-19/Singapore/7483/2022 | Y | 899 | C | 5 | 20220626 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | Y | 899 | insLstopstopDSRstopVRstop | 4 | 20230401 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | Y | 899 | del | 54 | 20241226 |
| EPI_ISL_10824322 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84757/2022 | Y | 899 | P | 1 | 20220124 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | Y | 899 | V | 10 | 20220620 |
| EPI_ISL_2695990 | NSP3 | hCoV-19/USA/AZ-ASPHL-1155/2020 | Y | 899 | insLXLLstopstopDSRstopVRX | 1 | 20200612 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | Y | 899 | W | 3 | 20220121 |
| EPI_ISL_19078886 | NSP3 | hCoV-19/Shanghai/SCDC-HG0308-671/2024 | Y | 899 | H | 95 | 20240306 |
| EPI_ISL_3801323 | NSP3 | hCoV-19/Thailand/Songkhla_SEQ14646/2021 | Y | 899 | K | 1 | 20210808 |
| EPI_ISL_18722719 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048292/2023 | C | 900 | del | 44 | 20231126 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | C | 900 | insstopR | 1 | 20211115 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | C | 900 | V | 16 | 20230418 |
| EPI_ISL_11326421 | NSP3 | hCoV-19/France/IDF-ChVe-21470505/2021 | C | 900 | W | 1 | 20211121 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | C | 900 | insF | 8 | 20211227 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | C | 900 | M | 1 | 20230217 |
| EPI_ISL_1304490 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-29936/2021 | C | 900 | P | 2 | 20210122 |
| EPI_ISL_3801323 | NSP3 | hCoV-19/Thailand/Songkhla_SEQ14646/2021 | C | 900 | K | 1 | 20210808 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | C | 900 | T | 2 | 20230217 |
| EPI_ISL_19257960 | NSP3 | hCoV-19/South Korea/KDCA293502/2024 | C | 900 | S | 52 | 20240221 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 900 | I | 1 | 20210318 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | C | 900 | insstopstopD | 1 | 20200721 |
| EPI_ISL_12321688 | NSP3 | hCoV-19/Turkey/HSGM-GS2531/2022 | C | 900 | R | 14 | 20220405 |
| EPI_ISL_19745558 | NSP3 | hCoV-19/USA/NY-PRL-250219_81D11/2025 | C | 900 | Y | 142 | 20250206 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | C | 900 | L | 63 | 20240904 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 900 | Q | 4 | 20220210 |
| EPI_ISL_3421877 | NSP3 | hCoV-19/England/OXON-FA9064/2021 | C | 900 | stop | 2 | 20210710 |
| EPI_ISL_19446979 | NSP3 | hCoV-19/Japan/FR011-0769/2024 | C | 900 | G | 10 | 20240912 |
| EPI_ISL_19756550 | NSP3 | hCoV-19/Russia/SPE-RII-MH223230S/2024 | N | 901 | S | 632 | 20241220 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | N | 901 | del | 55 | 20231218 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | N | 901 | G | 1 | 20210726 |
| EPI_ISL_16890418 | NSP3 | hCoV-19/Mexico/ROO_CIAD-IMSS-1022879-UIMY/2022 | N | 901 | B | 5 | 20221206 |
| EPI_ISL_2650086 | NSP3 | hCoV-19/USA/AZ-ASPHL-1395/2020 | N | 901 | Q | 1 | 20200625 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | N | 901 | C | 10 | 20220620 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | N | 901 | V | 7 | 20230217 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | N | 901 | A | 3 | 20210801 |
| EPI_ISL_3421877 | NSP3 | hCoV-19/England/OXON-FA9064/2021 | N | 901 | E | 1 | 20210710 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | N | 901 | F | 2 | 20210812 |
| EPI_ISL_18621768 | NSP3 | hCoV-19/USA/NJ-CDC-QDX88183142/2023 | N | 901 | Y | 49 | 20231128 |
| EPI_ISL_19780435 | NSP3 | hCoV-19/USA/NY-PRL-250311_81D01/2025 | N | 901 | T | 118 | 20250301 |
| EPI_ISL_4530188 | NSP3 | hCoV-19/England/PHEC-3G073G85/2021 | N | 901 | insstopPT | 1 | 20210919 |
| EPI_ISL_19686076 | NSP3 | hCoV-19/USA/MI-UM-10061095107/2024 | N | 901 | K | 1621 | 20241203 |
| EPI_ISL_19783283 | NSP3 | hCoV-19/Japan/FR035-0101/2025 | N | 901 | H | 9 | 20250228 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | N | 901 | stop | 24 | 20230401 |
| EPI_ISL_2650086 | NSP3 | hCoV-19/USA/AZ-ASPHL-1395/2020 | N | 901 | insFRFLQKSXXXXXstopX | 1 | 20200625 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | N | 901 | insstop | 33 | 20230217 |
| EPI_ISL_19518477 | NSP3 | hCoV-19/Haiti/EUSOM-14-12/2023 | N | 901 | L | 16 | 20230523 |
| EPI_ISL_19308780 | NSP3 | hCoV-19/Russia/SPE-RII-MH194884S/2024 | N | 901 | I | 15 | 20240725 |
| EPI_ISL_18867838 | NSP3 | hCoV-19/Sweden/AC-24COR000298/2023 | N | 901 | D | 87 | 20231221 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | N | 901 | R | 2 | 20221230 |
| EPI_ISL_8803744 | NSP3 | hCoV-19/India/MH-NCCS-56193/2021 | K | 902 | insLL | 1 | 20210808 |
| EPI_ISL_19768818 | NSP3 | hCoV-19/USA/NY-CDC-QDX32126379/2025 | K | 902 | Q | 25 | 20250217 |
| EPI_ISL_19710312 | NSP3 | hCoV-19/Netherlands/NB-RIVM-144925/2025 | K | 902 | M | 34 | 20250102 |
| EPI_ISL_12934193 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111121-1424/2021 | K | 902 | insL | 1 | 20211111 |
| EPI_ISL_4530188 | NSP3 | hCoV-19/England/PHEC-3G073G85/2021 | K | 902 | V | 2 | 20210919 |
| EPI_ISL_19524720 | NSP3 | hCoV-19/Ireland/G-LUH-N3263/2024 | K | 902 | E | 1 | 20241002 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | K | 902 | F | 1 | 20210106 |
| EPI_ISL_17766951 | NSP3 | hCoV-19/Morocco/INH-5020/2021 | K | 902 | Y | 1 | 20210527 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | K | 902 | insGWstopSstopstopLLC | 2 | 20210414 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | K | 902 | del | 53 | 20240904 |
| EPI_ISL_16622142 | NSP3 | hCoV-19/Latvia/7680734/2022 | K | 902 | T | 35 | 20220809 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | K | 902 | P | 45 | 20230401 |
| EPI_ISL_17057332 | NSP3 | hCoV-19/USA/TX-UTEP-B002474051/2022 | K | 902 | stop | 65 | 20220301 |
| EPI_ISL_19518477 | NSP3 | hCoV-19/Haiti/EUSOM-14-12/2023 | K | 902 | I | 11 | 20230523 |
| EPI_ISL_19756711 | NSP3 | hCoV-19/Australia/QLD0x01524C/2025 | K | 902 | N | 3180 | 20250210 |
| EPI_ISL_19793735 | NSP3 | hCoV-19/Canada/NS-NSH-769133/2025 | K | 902 | R | 425 | 20250225 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | K | 902 | A | 1 | 20221230 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | K | 902 | W | 1 | 20240712 |
| EPI_ISL_11385204 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-49/2022 | K | 902 | S | 5 | 20220225 |
| EPI_ISL_10031657 | NSP3 | hCoV-19/USA/GA-CDC-MMB13946417/2022 | K | 902 | G | 1 | 20220127 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | K | 902 | L | 20 | 20230217 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | T | 903 | R | 8 | 20221230 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | T | 903 | del | 49 | 20241226 |
| EPI_ISL_19452128 | NSP3 | hCoV-19/USA/CT-DPH-1240893001/2024 | T | 903 | K | 29 | 20240803 |
| EPI_ISL_11326421 | NSP3 | hCoV-19/France/IDF-ChVe-21470505/2021 | T | 903 | W | 2 | 20211121 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | T | 903 | V | 4 | 20230217 |
| EPI_ISL_12599435 | NSP3 | hCoV-19/USA/ID-IBL-717875/2021 | T | 903 | D | 1 | 20210316 |
| EPI_ISL_19552680 | NSP3 | hCoV-19/Spain/TO-HUT-72203017/2024 | T | 903 | A | 190 | 20241015 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | T | 903 | Y | 1 | 20230217 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | T | 903 | N | 12 | 20230418 |
| EPI_ISL_17022641 | NSP3 | hCoV-19/Chile/VS-96094/2021 | T | 903 | insTVASL | 1 | 20210516 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | T | 903 | E | 2 | 20220728 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | T | 903 | L | 22 | 20230217 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | T | 903 | Q | 4 | 20220131 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | T | 903 | stop | 3 | 20211115 |
| EPI_ISL_19808417 | NSP3 | hCoV-19/Canada/ON-PHL-202504773/2025 | T | 903 | I | 1758 | 20250306 |
| EPI_ISL_19043316 | NSP3 | hCoV-19/Chile/VS-ISP-20215/2024 | T | 903 | P | 265 | 20240307 |
| EPI_ISL_19592583 | NSP3 | hCoV-19/Italy/LOM_ASSTCREMONA_CRV-7172647/2024 | T | 903 | S | 43 | 20241024 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | T | 903 | G | 1 | 20210803 |
| EPI_ISL_4219251 | NSP3 | hCoV-19/USA/ID-IBL-753465/2021 | T | 903 | insQstop | 1 | 20210826 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | V | 904 | del | 63 | 20241226 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | V | 904 | C | 12 | 20230418 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | V | 904 | Y | 2 | 20210414 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | V | 904 | H | 1 | 20240712 |
| EPI_ISL_19687661 | NSP3 | hCoV-19/USA/NY-PRL-250114_82B10/2024 | V | 904 | I | 763 | 20241227 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | V | 904 | insstopstopDSR | 1 | 20210812 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | V | 904 | Q | 1 | 20210726 |
| EPI_ISL_19633141 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6908/2024 | V | 904 | A | 8 | 20240808 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | V | 904 | insIRQstopVSstopVCstopRN | 4 | 20210328 |
| EPI_ISL_1265168 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS00740/2021 | V | 904 | G | 2 | 20210128 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 904 | D | 2 | 20220210 |
| EPI_ISL_9954512 | NSP3 | hCoV-19/Italy/VEN-OR01P15175/2021 | V | 904 | E | 2 | 20211027 |
| EPI_ISL_18139463 | NSP3 | hCoV-19/Egypt/CPHL-EGY23966/2022 | V | 904 | S | 2 | 20220815 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | V | 904 | T | 2 | 20230217 |
| EPI_ISL_19146277 | NSP3 | hCoV-19/Spain/AN-PMC-40120/2024 | V | 904 | L | 76 | 20240301 |
| EPI_ISL_18863864 | NSP3 | hCoV-19/Italy/LOM-UniMI178/2023 | V | 904 | R | 1 | 20231211 |
| EPI_ISL_12934193 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111121-1424/2021 | V | 904 | F | 1 | 20211111 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | V | 904 | stop | 20 | 20220703 |
| EPI_ISL_18863864 | NSP3 | hCoV-19/Italy/LOM-UniMI178/2023 | G | 905 | L | 2 | 20231211 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | G | 905 | T | 2 | 20210909 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | G | 905 | F | 1 | 20240712 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | G | 905 | N | 17 | 20230401 |
| EPI_ISL_19588631 | NSP3 | hCoV-19/Brazil/AL-FIOCRUZ-11877/2024 | G | 905 | R | 6 | 20240826 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | G | 905 | Q | 3 | 20221031 |
| EPI_ISL_18914837 | NSP3 | hCoV-19/USA/NY-NYULH-18305/2024 | G | 905 | D | 43 | 20240205 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | G | 905 | P | 1 | 20210813 |
| EPI_ISL_19555535 | NSP3 | hCoV-19/USA/MN-MDH-44185/2024 | G | 905 | C | 319 | 20241031 |
| EPI_ISL_19531515 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YKNJI/2024 | G | 905 | S | 474 | 20241020 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | G | 905 | A | 2 | 20211015 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | G | 905 | stop | 25 | 20220703 |
| EPI_ISL_14445436 | NSP3 | hCoV-19/Peru/PIU-INS-23722/2022 | G | 905 | V | 12 | 20220721 |
| EPI_ISL_10943992 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9029/2022 | G | 905 | H | 1 | 20220209 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | G | 905 | del | 95 | 20241226 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | G | 905 | Y | 1 | 20230418 |
| EPI_ISL_18863864 | NSP3 | hCoV-19/Italy/LOM-UniMI178/2023 | E | 906 | R | 2 | 20231211 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | E | 906 | N | 5 | 20220121 |
| EPI_ISL_19690530 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YKNUA/2024 | E | 906 | G | 435 | 20241230 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | E | 906 | M | 1 | 20200814 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | E | 906 | T | 3 | 20210813 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | E | 906 | insSRstop | 1 | 20210802 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | E | 906 | L | 1 | 20240712 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | E | 906 | S | 3 | 20210805 |
| EPI_ISL_19826381 | NSP3 | hCoV-19/Canada/ON-PHL-202505077/2025 | E | 906 | A | 454 | 20250326 |
| EPI_ISL_12934193 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111121-1424/2021 | E | 906 | H | 1 | 20211111 |
| EPI_ISL_19527191 | NSP3 | hCoV-19/USA/MD-UM-G88A61H1/2024 | E | 906 | K | 56 | 20240919 |
| EPI_ISL_14235804 | NSP3 | hCoV-19/Denmark/DCGC-557598/2022 | E | 906 | Z | 3 | 20220728 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | E | 906 | del | 84 | 20241226 |
| EPI_ISL_11942241 | NSP3 | hCoV-19/France/ARA-ERFB-2071006185/2021 | E | 906 | Y | 4 | 20211127 |
| EPI_ISL_19803466 | NSP3 | hCoV-19/USA/WI-WSLH-2500969/2025 | E | 906 | D | 26806 | 20250301 |
| EPI_ISL_17275291 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45816/2023 | E | 906 | Q | 12 | 20230217 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | E | 906 | F | 1 | 20230104 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | E | 906 | P | 1 | 20220509 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | E | 906 | I | 8 | 20211227 |
| EPI_ISL_17856337 | NSP3 | hCoV-19/Canada/BC-BCCDC-634790/2023 | E | 906 | V | 70 | 20230612 |
| EPI_ISL_18863854 | NSP3 | hCoV-19/Italy/LOM-UniMI168/2023 | E | 906 | stop | 6 | 20231218 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | L | 907 | M | 2 | 20240712 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | L | 907 | stop | 8 | 20221031 |
| EPI_ISL_19067639 | NSP3 | hCoV-19/USA/NY-URMC-O4S1N302-1/2024 | L | 907 | V | 15 | 20240401 |
| EPI_ISL_18112344 | NSP3 | hCoV-19/Czech Republic/UMTM463788/2022 | L | 907 | Q | 3 | 20220308 |
| EPI_ISL_19407067 | NSP3 | hCoV-19/Spain/VC-CVA_GRAL-125061/2024 | L | 907 | S | 101 | 20240707 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | L | 907 | insLTFVHLSstopP | 1 | 20210803 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 907 | del | 92 | 20241226 |
| EPI_ISL_17033955 | NSP3 | hCoV-19/Puerto Rico/PR-002991353/2022 | L | 907 | J | 2 | 20221201 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | L | 907 | A | 3 | 20230217 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | L | 907 | insK | 1 | 20230401 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | L | 907 | N | 1 | 20220509 |
| EPI_ISL_19541394 | NSP3 | hCoV-19/Italy/LAZ-UCBM-2024-24/2024 | L | 907 | I | 1 | 20241002 |
| EPI_ISL_19480982 | NSP3 | hCoV-19/USA/CO-CDPHE-42323387/2024 | L | 907 | F | 73 | 20240916 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | L | 907 | C | 1 | 20200721 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | L | 907 | K | 1 | 20230217 |
| EPI_ISL_19831660 | NSP3 | hCoV-19/Luxembourg/LNS7410648/2025 | G | 908 | S | 408 | 20250324 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | G | 908 | K | 2 | 20210726 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | G | 908 | T | 1 | 20210803 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | G | 908 | stop | 4 | 20230104 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | G | 908 | M | 2 | 20220602 |
| EPI_ISL_16951840 | NSP3 | hCoV-19/Japan/TKYhug14913/2022 | G | 908 | A | 6 | 20221216 |
| EPI_ISL_17287663 | NSP3 | hCoV-19/USA/CA-CDPH-7000021112/2023 | G | 908 | D | 7 | 20221123 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | G | 908 | R | 17 | 20230217 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | G | 908 | I | 1 | 20230418 |
| EPI_ISL_19531404 | NSP3 | hCoV-19/Japan/FR032-0253/2024 | G | 908 | C | 279 | 20241006 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | G | 908 | del | 117 | 20241226 |
| EPI_ISL_17275291 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45816/2023 | G | 908 | P | 1 | 20230217 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | G | 908 | N | 2 | 20240712 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 908 | E | 1 | 20220210 |
| EPI_ISL_12934193 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111121-1424/2021 | G | 908 | insstopPT | 1 | 20211111 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | G | 908 | Q | 2 | 20230217 |
| EPI_ISL_17483937 | NSP3 | hCoV-19/Israel/ICH-741197580/2023 | G | 908 | V | 7 | 20230330 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | D | 909 | insGM | 1 | 20200729 |
| EPI_ISL_15845761 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-117609/2022 | D | 909 | Y | 1 | 20221026 |
| EPI_ISL_779597 | NSP3 | hCoV-19/Australia/VIC17977/2020 | D | 909 | B | 1 | 20200822 |
| EPI_ISL_13360082 | NSP3 | hCoV-19/Australia/QLD0x00F31A/2022 | D | 909 | A | 36 | 20220606 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | D | 909 | del | 117 | 20241226 |
| EPI_ISL_8436609 | NSP3 | hCoV-19/USA/CA-CDPH-3000284981/2021 | D | 909 | S | 2 | 20211214 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | D | 909 | N | 13 | 20240712 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | D | 909 | C | 1 | 20210803 |
| EPI_ISL_12934193 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111121-1424/2021 | D | 909 | V | 36 | 20211111 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | D | 909 | L | 5 | 20230418 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | D | 909 | P | 2 | 20230217 |
| EPI_ISL_16193104 | NSP3 | hCoV-19/Japan/TKYkbm62128/2022 | D | 909 | G | 37 | 20221121 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | D | 909 | T | 1 | 20230104 |
| EPI_ISL_19596474 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS101115/2024 | D | 909 | E | 55 | 20241128 |
| EPI_ISL_17591983 | NSP3 | hCoV-19/Nepal/NPHL-S-2436/2023 | D | 909 | M | 7 | 20230320 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | D | 909 | R | 1 | 20220728 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | D | 909 | Q | 3 | 20220121 |
| EPI_ISL_11359809 | NSP3 | hCoV-19/USA/KS-KSU-0766/2022 | D | 909 | H | 2 | 20220112 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | D | 909 | stop | 14 | 20220721 |
| EPI_ISL_4219251 | NSP3 | hCoV-19/USA/ID-IBL-753465/2021 | V | 910 | E | 1 | 20210826 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | V | 910 | T | 2 | 20220509 |
| EPI_ISL_19748665 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00021972_01/2024 | V | 910 | F | 59 | 20240821 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | V | 910 | stop | 1 | 20210803 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | V | 910 | P | 3 | 20220121 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 910 | S | 2 | 20220210 |
| EPI_ISL_12146112 | NSP3 | hCoV-19/Turkey/HSGM-GS1482/2022 | V | 910 | D | 1 | 20220401 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | V | 910 | C | 1 | 20220721 |
| EPI_ISL_17021249 | NSP3 | hCoV-19/Chile/RM-199378/2021 | V | 910 | Y | 2 | 20211228 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | V | 910 | del | 51 | 20241226 |
| EPI_ISL_19465425 | NSP3 | hCoV-19/Sweden/E-EGNW71A/2024 | V | 910 | A | 208 | 20240917 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | V | 910 | L | 60 | 20240712 |
| EPI_ISL_19660721 | NSP3 | hCoV-19/USA/CA-CDPH-500145098/2024 | V | 910 | I | 531 | 20241127 |
| EPI_ISL_16722914 | NSP3 | hCoV-19/Finland/THL-01354/2023 | V | 910 | G | 8 | 20230116 |
| EPI_ISL_17021241 | NSP3 | hCoV-19/Chile/RM-199235/2021 | V | 910 | insY | 1 | 20211227 |
| EPI_ISL_17591983 | NSP3 | hCoV-19/Nepal/NPHL-S-2436/2023 | V | 910 | M | 7 | 20230320 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | R | 911 | F | 1 | 20210318 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | R | 911 | M | 3 | 20220119 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | R | 911 | stop | 3 | 20230217 |
| EPI_ISL_18914985 | NSP3 | hCoV-19/env/Ukraine/81342/2023 | R | 911 | G | 4 | 20231023 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | R | 911 | E | 40 | 20220602 |
| EPI_ISL_4572425 | NSP3 | hCoV-19/India/AP-CCMB-CIA7950/2021 | R | 911 | T | 2 | 20210809 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 911 | I | 3 | 20220210 |
| EPI_ISL_8812970 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-102921-1222/2021 | R | 911 | insstopCstop | 2 | 20211029 |
| EPI_ISL_17022641 | NSP3 | hCoV-19/Chile/VS-96094/2021 | R | 911 | N | 1 | 20210516 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | R | 911 | C | 1 | 20230418 |
| EPI_ISL_19683933 | NSP3 | hCoV-19/USA/CO-CDPHE-42779826/2024 | R | 911 | K | 83 | 20241230 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | R | 911 | V | 14 | 20230401 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | R | 911 | del | 43 | 20241226 |
| EPI_ISL_16242133 | NSP3 | hCoV-19/Japan/RIMD15891/2022 | R | 911 | S | 4 | 20220728 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | R | 911 | Y | 1 | 20230217 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | R | 911 | L | 9 | 20231218 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | R | 911 | insstopCstopRNNELLV | 7 | 20220602 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | E | 912 | insQstopVTCF | 1 | 20210806 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | E | 912 | K | 58 | 20240712 |
| EPI_ISL_19280900 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284404/2024 | E | 912 | G | 69 | 20240703 |
| EPI_ISL_13956409 | NSP3 | hCoV-19/England/PLYM-3EE3C08/2022 | E | 912 | Z | 1 | 20220712 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | E | 912 | insMYMG | 1 | 20211228 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | E | 912 | N | 1 | 20200721 |
| EPI_ISL_13736273 | NSP3 | hCoV-19/Chile/RM-82171/2022 | E | 912 | insXXXXXXXXXXXXXXXXXXXXMYMG | 1 | 20220701 |
| EPI_ISL_18833433 | NSP3 | hCoV-19/France/PAC-HCL024007930301/2024 | E | 912 | D | 72 | 20240108 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | E | 912 | R | 8 | 20220509 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | E | 912 | F | 2 | 20230418 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | E | 912 | Y | 2 | 20230217 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | E | 912 | P | 1 | 20230217 |
| EPI_ISL_13739826 | NSP3 | hCoV-19/England/QEUH-3EB2BE7/2022 | E | 912 | V | 9 | 20220629 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | E | 912 | H | 1 | 20240904 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | E | 912 | stop | 5 | 20210803 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | E | 912 | A | 37 | 20250116 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 912 | T | 1 | 20210318 |
| EPI_ISL_17714981 | NSP3 | hCoV-19/India/UP-MRU-ICMR-23/2023 | E | 912 | Q | 53 | 20230420 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | E | 912 | del | 38 | 20241226 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | E | 912 | L | 1 | 20220119 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | E | 912 | S | 22 | 20230401 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | T | 913 | R | 1 | 20230217 |
| EPI_ISL_18264335 | NSP3 | hCoV-19/USA/TX-HMH-M-133421/2023 | T | 913 | N | 20 | 20230901 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | T | 913 | del | 38 | 20241226 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | T | 913 | Q | 37 | 20220602 |
| EPI_ISL_15473936 | NSP3 | hCoV-19/Italy/LOM-ASST-LS14/2022 | T | 913 | K | 6 | 20221004 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | T | 913 | stop | 45 | 20230401 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | T | 913 | S | 12 | 20211227 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | T | 913 | C | 1 | 20230217 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | T | 913 | V | 6 | 20240712 |
| EPI_ISL_19822507 | NSP3 | hCoV-19/Australia/QLD0x01548E/2025 | T | 913 | I | 1102 | 20250322 |
| EPI_ISL_19822310 | NSP3 | hCoV-19/New Zealand/25YA0751/2025 | T | 913 | A | 220 | 20250318 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | T | 913 | P | 5 | 20230217 |
| EPI_ISL_17022641 | NSP3 | hCoV-19/Chile/VS-96094/2021 | M | 914 | insVTMPL | 1 | 20210516 |
| EPI_ISL_4572425 | NSP3 | hCoV-19/India/AP-CCMB-CIA7950/2021 | M | 914 | G | 1 | 20210809 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 914 | S | 1 | 20220210 |
| EPI_ISL_12220144 | NSP3 | hCoV-19/Ecuador/INSPI-L2B/2022 | M | 914 | insstopVTCFNMPIstopILAKE | 1 | 20220119 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | M | 914 | stop | 48 | 20220602 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | M | 914 | C | 20 | 20230401 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | M | 914 | R | 5 | 20230217 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | M | 914 | del | 37 | 20241226 |
| EPI_ISL_8049923 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6860/2021 | M | 914 | P | 1 | 20211008 |
| EPI_ISL_19013076 | NSP3 | hCoV-19/Bolivia/TJ-INLASA-2272/2021 | M | 914 | insXX | 1 | 20211025 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | M | 914 | E | 2 | 20220509 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | M | 914 | Q | 6 | 20230217 |
| EPI_ISL_19737597 | NSP3 | hCoV-19/USA/IA-SHL-2576881/2025 | M | 914 | L | 198 | 20250205 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | M | 914 | F | 2 | 20240712 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | M | 914 | insstop | 2 | 20210806 |
| EPI_ISL_19744182 | NSP3 | hCoV-19/Wales/CLIMB-CM7YR1E4/2025 | M | 914 | I | 1844 | 20250210 |
| EPI_ISL_18264335 | NSP3 | hCoV-19/USA/TX-HMH-M-133421/2023 | M | 914 | N | 17 | 20230901 |
| EPI_ISL_19822749 | NSP3 | hCoV-19/Finland/THL-01186/2025 | M | 914 | V | 93 | 20250317 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | M | 914 | K | 4 | 20240904 |
| EPI_ISL_17082179 | NSP3 | hCoV-19/Japan/TCIM-115/2023 | M | 914 | T | 19 | 20230117 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | M | 914 | A | 1 | 20231126 |
| EPI_ISL_11755073 | NSP3 | hCoV-19/USA/NC-WFSM-1085-3247/2022 | S | 915 | M | 2 | 20220314 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | S | 915 | stop | 3 | 20220627 |
| EPI_ISL_18264335 | NSP3 | hCoV-19/USA/TX-HMH-M-133421/2023 | S | 915 | E | 19 | 20230901 |
| EPI_ISL_19669336 | NSP3 | hCoV-19/USA/CA-PFZ02799/2024 | S | 915 | R | 1257 | 20240928 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | S | 915 | K | 6 | 20240904 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | S | 915 | insstop | 1 | 20210803 |
| EPI_ISL_19553289 | NSP3 | hCoV-19/Germany/BY-RKI-I-1146059/2024 | S | 915 | F | 1163 | 20241023 |
| EPI_ISL_19324505 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBD19371/2024 | S | 915 | C | 49 | 20240729 |
| EPI_ISL_19773660 | NSP3 | hCoV-19/Japan/OIPH-FR027-0012/2025 | S | 915 | G | 639 | 20250218 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | S | 915 | A | 1 | 20220509 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | S | 915 | del | 37 | 20241226 |
| EPI_ISL_14944882 | NSP3 | hCoV-19/Argentina/INEI122128/2022 | S | 915 | V | 42 | 20220809 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | S | 915 | Q | 22 | 20231126 |
| EPI_ISL_19673457 | NSP3 | hCoV-19/USA/NY-NYULH-21807/2025 | S | 915 | N | 445 | 20250102 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | S | 915 | insstopstopCstopRNNE | 1 | 20210813 |
| EPI_ISL_19684344 | NSP3 | hCoV-19/Japan/FR049-1209/2024 | S | 915 | I | 574 | 20241219 |
| EPI_ISL_8724991 | NSP3 | hCoV-19/Colombia/VAC-UV-20030255/2022 | S | 915 | insstopVMLEKQstopV | 1 | 20220103 |
| EPI_ISL_19234574 | NSP3 | hCoV-19/Sichuan/PZHCDC-0360/2024 | S | 915 | T | 28 | 20240311 |
| EPI_ISL_4572425 | NSP3 | hCoV-19/India/AP-CCMB-CIA7950/2021 | S | 915 | L | 2 | 20210809 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | S | 915 | P | 1 | 20210806 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 916 | E | 1 | 20210318 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | Y | 916 | T | 45 | 20230217 |
| EPI_ISL_19826751 | NSP3 | hCoV-19/USA/MN-MDH-46614/2025 | Y | 916 | H | 939 | 20250401 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Y | 916 | W | 9 | 20240904 |
| EPI_ISL_19243516 | NSP3 | hCoV-19/Sweden/M-SUS0023173/2024 | Y | 916 | C | 287 | 20240626 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | Y | 916 | I | 2 | 20211115 |
| EPI_ISL_8007816 | NSP3 | hCoV-19/Germany/BE-IMB20223/2021 | Y | 916 | insS | 1 | 20211115 |
| EPI_ISL_19797312 | NSP3 | hCoV-19/Finland/THL-01501/2025 | Y | 916 | N | 22 | 20250221 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | Y | 916 | stop | 43 | 20230401 |
| EPI_ISL_19463510 | NSP3 | hCoV-19/USA/UT-UPHL-241004512999/2024 | Y | 916 | S | 3 | 20240919 |
| EPI_ISL_18772362 | NSP3 | hCoV-19/Canada/QC-L00693887001/2024 | Y | 916 | L | 31 | 20240108 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | Y | 916 | del | 36 | 20241226 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | Y | 916 | A | 4 | 20230217 |
| EPI_ISL_19419495 | NSP3 | hCoV-19/USA/NY-CDC-LC1119487/2024 | Y | 916 | F | 151 | 20240827 |
| EPI_ISL_6083724 | NSP3 | hCoV-19/Russia/BA-RII-MH36713S/2021 | Y | 916 | D | 3 | 20211016 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | Y | 916 | V | 5 | 20220627 |
| EPI_ISL_10831731 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83674/2022 | L | 917 | Y | 1 | 20220120 |
| EPI_ISL_19528497 | NSP3 | hCoV-19/Canada/BC-BCCDC-745573/2024 | L | 917 | V | 226 | 20241020 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | L | 917 | R | 23 | 20230401 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | L | 917 | insCT | 3 | 20220121 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | L | 917 | E | 2 | 20231126 |
| EPI_ISL_12321574 | NSP3 | hCoV-19/Turkey/HSGM-GS2662/2022 | L | 917 | W | 4 | 20220405 |
| EPI_ISL_17181888 | NSP3 | hCoV-19/USA/TX-HMH-M-126220/2023 | L | 917 | S | 6 | 20230222 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | L | 917 | T | 5 | 20220627 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | L | 917 | P | 1 | 20220119 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | L | 917 | C | 60 | 20220728 |
| EPI_ISL_18401962 | NSP3 | hCoV-19/Sichuan/CDCDC-19-CX3271/2023 | L | 917 | M | 33 | 20230922 |
| EPI_ISL_17275343 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45869/2023 | L | 917 | I | 1 | 20230217 |
| EPI_ISL_11125676 | NSP3 | hCoV-19/Finland/THL-202208358/2022 | L | 917 | F | 12 | 20220223 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 917 | K | 1 | 20240904 |
| EPI_ISL_12321688 | NSP3 | hCoV-19/Turkey/HSGM-GS2531/2022 | L | 917 | stop | 3 | 20220405 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | L | 917 | del | 48 | 20240316 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | F | 918 | insLstopC | 2 | 20230217 |
| EPI_ISL_19802507 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11003/2025 | F | 918 | L | 388 | 20250301 |
| EPI_ISL_2650086 | NSP3 | hCoV-19/USA/AZ-ASPHL-1395/2020 | F | 918 | H | 1 | 20200625 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | F | 918 | Y | 35 | 20240904 |
| EPI_ISL_2106980 | NSP3 | hCoV-19/Indonesia/JB-NIHRD-WGS01389/2021 | F | 918 | K | 1 | 20210303 |
| EPI_ISL_16284105 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223292480/2022 | F | 918 | insQHANLDSCKRVLNVVCKTCGQQQTMSYLF | 3 | 20221125 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | F | 918 | W | 4 | 20220121 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | F | 918 | M | 36 | 20230401 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | F | 918 | V | 9 | 20240712 |
| EPI_ISL_19831533 | NSP3 | hCoV-19/Germany/NW-RKI-I-1148012/2025 | F | 918 | C | 25 | 20250324 |
| EPI_ISL_17022641 | NSP3 | hCoV-19/Chile/VS-96094/2021 | F | 918 | T | 1 | 20210516 |
| EPI_ISL_18981414 | NSP3 | hCoV-19/USA/TX-HMH-M-139677/2024 | F | 918 | S | 7 | 20240218 |
| EPI_ISL_12583837 | NSP3 | hCoV-19/Turkey/HSGM-GS2733/2022 | F | 918 | A | 2 | 20220407 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | F | 918 | del | 57 | 20240316 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | F | 918 | N | 1 | 20220119 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | F | 918 | I | 1 | 20210806 |
| EPI_ISL_12220144 | NSP3 | hCoV-19/Ecuador/INSPI-L2B/2022 | Q | 919 | C | 1 | 20220119 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 919 | T | 1 | 20220210 |
| EPI_ISL_19441830 | NSP3 | hCoV-19/USA/PA-CDC-LC1120570/2024 | Q | 919 | L | 160 | 20240904 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Q | 919 | Y | 1 | 20220509 |
| EPI_ISL_19605396 | NSP3 | hCoV-19/USA/MN-MDH-44341/2024 | Q | 919 | R | 414 | 20241126 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | Q | 919 | S | 8 | 20220728 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | Q | 919 | A | 4 | 20220121 |
| EPI_ISL_19662837 | NSP3 | hCoV-19/Singapore/R64MQ15/2024 | Q | 919 | K | 115 | 20241121 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | Q | 919 | del | 45 | 20240316 |
| EPI_ISL_16284089 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223160978/2022 | Q | 919 | insHANLDSCKRVLNVVCKTCGQQTMSYLFQ | 1 | 20221112 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | Q | 919 | G | 2 | 20210726 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Q | 919 | P | 26 | 20240904 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | Q | 919 | V | 1 | 20210909 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | Q | 919 | insMPIstopILA | 34 | 20210419 |
| EPI_ISL_12738001 | NSP3 | hCoV-19/Germany/BY-RKI-I-798600/2022 | Q | 919 | H | 47 | 20220504 |
| EPI_ISL_18963435 | NSP3 | hCoV-19/India/DL-JAN-MAMC-LNHD-01/2024 | Q | 919 | E | 13 | 20240103 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | Q | 919 | N | 46 | 20230217 |
| EPI_ISL_14562148 | NSP3 | hCoV-19/Mexico/PUE_CIAD-IMSS_202201091952/2022 | Q | 919 | stop | 12 | 20220802 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | Q | 919 | W | 1 | 20210812 |
| EPI_ISL_7832662 | NSP3 | hCoV-19/USA/ID-IBL-775212/2021 | Q | 919 | F | 2 | 20211205 |
| EPI_ISL_19351738 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242823/2024 | H | 920 | V | 3 | 20240712 |
| EPI_ISL_8049923 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6860/2021 | H | 920 | stop | 1 | 20211008 |
| EPI_ISL_2650086 | NSP3 | hCoV-19/USA/AZ-ASPHL-1395/2020 | H | 920 | insTF | 1 | 20200625 |
| EPI_ISL_19781933 | NSP3 | hCoV-19/USA/IL-RIPHL_81610_G/2025 | H | 920 | Q | 113 | 20250210 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | H | 920 | T | 7 | 20220728 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | H | 920 | E | 35 | 20230401 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | H | 920 | M | 9 | 20220602 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | H | 920 | G | 3 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | H | 920 | P | 1 | 20210318 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | H | 920 | I | 1 | 20210803 |
| EPI_ISL_18799929 | NSP3 | hCoV-19/France/ARA-HCL724000017401/2024 | H | 920 | R | 223 | 20240102 |
| EPI_ISL_19656904 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147002/2024 | H | 920 | D | 5 | 20241106 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | H | 920 | K | 35 | 20210803 |
| EPI_ISL_1304921 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-30368/2020 | H | 920 | insPIstopILAKESstopTWCV | 1 | 20201224 |
| EPI_ISL_11323720 | NSP3 | hCoV-19/India/MH-MCGM-ICMR-INSACOG-WG3000/2022 | H | 920 | L | 5 | 20220124 |
| EPI_ISL_19829296 | NSP3 | hCoV-19/USA/CA-SCPHL-25WGS00112/2025 | H | 920 | Y | 2383 | 20250324 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | H | 920 | del | 45 | 20240316 |
| EPI_ISL_18098288 | NSP3 | hCoV-19/Netherlands/NB-RIVM-130623/2023 | H | 920 | N | 24 | 20230629 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | A | 921 | L | 6 | 20230217 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | A | 921 | del | 36 | 20240316 |
| EPI_ISL_19554887 | NSP3 | hCoV-19/Sweden/F-91629602NG/2024 | A | 921 | T | 371 | 20241016 |
| EPI_ISL_17275343 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45869/2023 | A | 921 | I | 1 | 20230217 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | A | 921 | Q | 1 | 20210803 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | A | 921 | N | 5 | 20210310 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | A | 921 | K | 60 | 20230401 |
| EPI_ISL_10149329 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-346160/2022 | A | 921 | D | 4 | 20220210 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | A | 921 | S | 55 | 20231126 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 921 | H | 1 | 20230217 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | A | 921 | P | 11 | 20220602 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | A | 921 | E | 34 | 20210419 |
| EPI_ISL_7832662 | NSP3 | hCoV-19/USA/ID-IBL-775212/2021 | A | 921 | M | 4 | 20211205 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | A | 921 | F | 4 | 20231218 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | A | 921 | C | 7 | 20220728 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | A | 921 | G | 2 | 20210106 |
| EPI_ISL_3162116 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC1397/2021 | A | 921 | Y | 1 | 20210324 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | A | 921 | R | 2 | 20230217 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | A | 921 | insQ | 1 | 20200814 |
| EPI_ISL_19778572 | NSP3 | hCoV-19/USA/VA-VCUVAS3-YWMY290882/2025 | A | 921 | V | 587 | 20250224 |
| EPI_ISL_19793344 | NSP3 | hCoV-19/USA/NE-NPHL-RP252020/2025 | N | 922 | T | 131 | 20250307 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | N | 922 | insG | 1 | 20240904 |
| EPI_ISL_19821185 | NSP3 | hCoV-19/USA/NY-UB-ECMC-01603/2024 | N | 922 | S | 499 | 20240916 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | N | 922 | insELL | 5 | 20210310 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | N | 922 | R | 1 | 20230217 |
| EPI_ISL_16064065 | NSP3 | hCoV-19/South Africa/SU-NHLS_6217/2022 | N | 922 | I | 12 | 20221125 |
| EPI_ISL_18854049 | NSP3 | hCoV-19/Poland/Kce-187/2024 | N | 922 | D | 50 | 20240110 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | N | 922 | del | 35 | 20240316 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | N | 922 | L | 6 | 20230217 |
| EPI_ISL_15791793 | NSP3 | hCoV-19/Canada/SK-RRPL-547387/2022 | N | 922 | Y | 38 | 20221025 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | N | 922 | insDPSF | 1 | 20220509 |
| EPI_ISL_18779974 | NSP3 | hCoV-19/USA/NY-CDC-QDX90793244/2023 | N | 922 | K | 73 | 20231228 |
| EPI_ISL_8618825 | NSP3 | hCoV-19/England/MILK-3127D4E/2022 | N | 922 | B | 4 | 20220104 |
| EPI_ISL_7677307 | NSP3 | hCoV-19/Russia/KDA-RII-MH37779S/2021 | N | 922 | F | 1 | 20211031 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | N | 922 | insstopVTCFNMP | 1 | 20211231 |
| EPI_ISL_7832662 | NSP3 | hCoV-19/USA/ID-IBL-775212/2021 | N | 922 | P | 4 | 20211205 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | N | 922 | insP | 1 | 20210106 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | N | 922 | Q | 42 | 20230401 |
| EPI_ISL_18775137 | NSP3 | hCoV-19/USA/CA-HLX-STM-XJ3MS9SKB/2023 | N | 922 | H | 36 | 20231216 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | N | 922 | stop | 1 | 20210803 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | L | 923 | K | 1 | 20200715 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | L | 923 | F | 15 | 20231126 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | L | 923 | stop | 82 | 20230401 |
| EPI_ISL_19658391 | NSP3 | hCoV-19/USA/CO-CDPHE-42687331/2024 | L | 923 | V | 151 | 20241225 |
| EPI_ISL_13818827 | NSP3 | hCoV-19/Singapore/7475/2022 | L | 923 | J | 4 | 20220626 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | L | 923 | Y | 2 | 20210726 |
| EPI_ISL_2106980 | NSP3 | hCoV-19/Indonesia/JB-NIHRD-WGS01389/2021 | L | 923 | G | 1 | 20210303 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | L | 923 | M | 3 | 20220121 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | L | 923 | del | 37 | 20240316 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | L | 923 | S | 9 | 20230217 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | L | 923 | insVV | 1 | 20211015 |
| EPI_ISL_16298163 | NSP3 | hCoV-19/Brazil/SP-NVBS26134GENOV852187794230/2022 | L | 923 | I | 16 | 20221112 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | D | 924 | I | 7 | 20220602 |
| EPI_ISL_19778932 | NSP3 | hCoV-19/South Korea/KDCA297053/2025 | D | 924 | Y | 68 | 20250218 |
| EPI_ISL_19700322 | NSP3 | hCoV-19/Canada/AB-ABPHL-130823/2025 | D | 924 | G | 491 | 20250117 |
| EPI_ISL_19659451 | NSP3 | hCoV-19/England/CLIMB-CM7YFXWX/2024 | D | 924 | B | 13 | 20241218 |
| EPI_ISL_12319871 | NSP3 | hCoV-19/Turkey/HSGM-GS1420/2022 | D | 924 | S | 6 | 20220401 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | D | 924 | K | 10 | 20220620 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | D | 924 | P | 2 | 20230217 |
| EPI_ISL_18699181 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48926/2023 | D | 924 | A | 52 | 20231210 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | D | 924 | R | 4 | 20220728 |
| EPI_ISL_5966644 | NSP3 | hCoV-19/Turkey/HSGM-E17581/2021 | D | 924 | H | 2 | 20211021 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 924 | C | 1 | 20220210 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | D | 924 | T | 37 | 20240904 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | D | 924 | del | 34 | 20240316 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | D | 924 | F | 1 | 20211019 |
| EPI_ISL_17885298 | NSP3 | hCoV-19/Georgia/Tb-s7560/2023 | D | 924 | V | 47 | 20230425 |
| EPI_ISL_19817201 | NSP3 | hCoV-19/England/CLIMB-CM7YFQ3N/2025 | D | 924 | E | 208 | 20250315 |
| EPI_ISL_7832662 | NSP3 | hCoV-19/USA/ID-IBL-775212/2021 | D | 924 | stop | 5 | 20211205 |
| EPI_ISL_19793503 | NSP3 | hCoV-19/Japan/FPIPH-FR007-0009/2025 | D | 924 | N | 715 | 20250308 |
| EPI_ISL_7832662 | NSP3 | hCoV-19/USA/ID-IBL-775212/2021 | S | 925 | I | 4 | 20211205 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | S | 925 | T | 50 | 20230401 |
| EPI_ISL_11887753 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0716/2021 | S | 925 | V | 1 | 20211229 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | S | 925 | Q | 8 | 20230605 |
| EPI_ISL_6023631 | NSP3 | hCoV-19/England/PHEC-3P044PFE/2021 | S | 925 | C | 2 | 20211014 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | S | 925 | del | 52 | 20240316 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | S | 925 | D | 8 | 20211227 |
| EPI_ISL_19786234 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12632-P0/2025 | S | 925 | F | 1047 | 20250227 |
| EPI_ISL_14378204 | NSP3 | hCoV-19/Germany/NW-RKI-I-916498/2022 | S | 925 | insCKRVLNVVCKTCGQQQTMSYXXXXXNLDS | 1 | 20220711 |
| EPI_ISL_19714152 | NSP3 | hCoV-19/Russia/YAN-RII-MH218820S/2024 | S | 925 | A | 85 | 20241210 |
| EPI_ISL_17425889 | NSP3 | hCoV-19/India/MH-CSIR-2891/2023 | S | 925 | L | 9 | 20230401 |
| EPI_ISL_7892938 | NSP3 | hCoV-19/USA/CA-Curative-124503/2021 | S | 925 | W | 34 | 20211202 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | S | 925 | stop | 2 | 20220703 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | S | 925 | N | 9 | 20230217 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | S | 925 | K | 1 | 20230217 |
| EPI_ISL_17022641 | NSP3 | hCoV-19/Chile/VS-96094/2021 | S | 925 | E | 1 | 20210516 |
| EPI_ISL_19262043 | NSP3 | hCoV-19/Netherlands/OV-RIVM-139156/2024 | S | 925 | Y | 81 | 20240616 |
| EPI_ISL_19745743 | NSP3 | hCoV-19/USA/NY-SUNYQB-X5974267/2025 | S | 925 | P | 272 | 20250121 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | S | 925 | R | 4 | 20231218 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | S | 925 | G | 11 | 20220620 |
| EPI_ISL_15292710 | NSP3 | hCoV-19/India/MH-NCCS-2748700698874/2021 | C | 926 | insFNMPIstopIL | 3 | 20211211 |
| EPI_ISL_1550953 | NSP3 | hCoV-19/South Africa/KRISP-K010993/2021 | C | 926 | G | 1 | 20210304 |
| EPI_ISL_19737366 | NSP3 | hCoV-19/USA/MN-MDH-46082/2025 | C | 926 | Y | 531 | 20250125 |
| EPI_ISL_11887753 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0716/2021 | C | 926 | H | 1 | 20211229 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | C | 926 | V | 11 | 20220620 |
| EPI_ISL_19722704 | NSP3 | hCoV-19/Spain/IB-HUSE-9759/2024 | C | 926 | W | 30 | 20241211 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | C | 926 | del | 45 | 20240316 |
| EPI_ISL_19803221 | NSP3 | hCoV-19/env/Germany/BY-LGL-6523829/2025 | C | 926 | S | 91 | 20250305 |
| EPI_ISL_17551087 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-INSACOG-WGS-1928/2022 | C | 926 | stop | 9 | 20221208 |
| EPI_ISL_18874493 | NSP3 | hCoV-19/USA/TX-HMH-M-138666/2024 | C | 926 | F | 246 | 20240129 |
| EPI_ISL_12582717 | NSP3 | hCoV-19/Turkey/HSGM-G8459/2022 | C | 926 | R | 2 | 20220401 |
| EPI_ISL_17425889 | NSP3 | hCoV-19/India/MH-CSIR-2891/2023 | C | 926 | Q | 1 | 20230401 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | C | 926 | I | 1 | 20240904 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | C | 926 | N | 8 | 20211227 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | C | 926 | insFNMPIstopILA | 10 | 20220104 |
| EPI_ISL_15293844 | NSP3 | hCoV-19/India/MH-NCCS-2712210345/2021 | C | 926 | insFNMPIRFL | 1 | 20211226 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | C | 926 | L | 10 | 20220121 |
| EPI_ISL_14754329 | NSP3 | hCoV-19/USA/TX-HMH-M-112983/2022 | C | 926 | A | 14 | 20220820 |
| EPI_ISL_18779079 | NSP3 | hCoV-19/USA/WA-CDC-UW24010256711/2024 | K | 927 | E | 56 | 20240102 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | K | 927 | M | 1 | 20220509 |
| EPI_ISL_16599636 | NSP3 | hCoV-19/USA/TX-HMH-122953/2023 | K | 927 | F | 11 | 20230109 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | K | 927 | H | 1 | 20211015 |
| EPI_ISL_15412010 | NSP3 | hCoV-19/USA/AZ-CDC-LC0901101/2022 | K | 927 | T | 65 | 20220927 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | K | 927 | insF | 5 | 20210310 |
| EPI_ISL_12293606 | NSP3 | hCoV-19/Lithuania/LTU000_RSL_11681922/2022 | K | 927 | N | 12 | 20220410 |
| EPI_ISL_19773440 | NSP3 | hCoV-19/USA/CA-CDPH-500145417/2024 | K | 927 | R | 236 | 20241222 |
| EPI_ISL_19531695 | NSP3 | hCoV-19/South Korea/KDCA296260/2024 | K | 927 | L | 12 | 20241015 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | K | 927 | del | 33 | 20240316 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | K | 927 | S | 12 | 20231218 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | K | 927 | A | 10 | 20221230 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | K | 927 | stop | 7 | 20220703 |
| EPI_ISL_16762716 | NSP3 | hCoV-19/USA/TX-HMH-M-123929/2023 | K | 927 | Q | 24 | 20230119 |
| EPI_ISL_11013525 | NSP3 | hCoV-19/Germany/HH-hpi-p12857/2022 | K | 927 | I | 103 | 20220127 |
| EPI_ISL_7892938 | NSP3 | hCoV-19/USA/CA-Curative-124503/2021 | K | 927 | V | 36 | 20211202 |
| EPI_ISL_19578231 | NSP3 | hCoV-19/Botswana/R242B05_BHP/2024 | R | 928 | K | 88 | 20241126 |
| EPI_ISL_1080873 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-25469/2021 | R | 928 | I | 1 | 20210121 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | R | 928 | W | 1 | 20240904 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 928 | H | 1 | 20220210 |
| EPI_ISL_3411126 | NSP3 | hCoV-19/USA/WA-CDC-UW21073080183/2021 | R | 928 | stop | 1 | 20210730 |
| EPI_ISL_3543373 | NSP3 | hCoV-19/USA/ID-IBL-631356/2020 | R | 928 | insE | 1 | 20200715 |
| EPI_ISL_16599636 | NSP3 | hCoV-19/USA/TX-HMH-122953/2023 | R | 928 | N | 12 | 20230109 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | R | 928 | insQstopVSstopV | 1 | 20210909 |
| EPI_ISL_19613477 | NSP3 | hCoV-19/Spain/MD-HULP-200474088/2024 | R | 928 | G | 304 | 20241108 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | R | 928 | del | 32 | 20240316 |
| EPI_ISL_10559934 | NSP3 | hCoV-19/Australia/VIC775/2020 | R | 928 | T | 1 | 20200331 |
| EPI_ISL_12220144 | NSP3 | hCoV-19/Ecuador/INSPI-L2B/2022 | R | 928 | Q | 2 | 20220119 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | R | 928 | L | 5 | 20221230 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | R | 928 | E | 22 | 20221031 |
| EPI_ISL_19690842 | NSP3 | hCoV-19/Italy/VEN-ULSS3GEN-7002699126_VE/2024 | R | 928 | S | 212 | 20241231 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | R | 928 | D | 2 | 20231218 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | R | 928 | A | 10 | 20220620 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | R | 928 | C | 1 | 20211015 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | R | 928 | insSstopTW | 4 | 20221031 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | R | 928 | M | 1 | 20210803 |
| EPI_ISL_17022641 | NSP3 | hCoV-19/Chile/VS-96094/2021 | V | 929 | Y | 1 | 20210516 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | V | 929 | G | 12 | 20230605 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | V | 929 | Q | 9 | 20211227 |
| EPI_ISL_19148748 | NSP3 | hCoV-19/USA/CA-MCPHL-GBD00259/2024 | V | 929 | F | 19 | 20240426 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | V | 929 | T | 2 | 20231218 |
| EPI_ISL_19826358 | NSP3 | hCoV-19/Canada/ON-PHL-202505050/2025 | V | 929 | I | 970 | 20250326 |
| EPI_ISL_17723473 | NSP3 | hCoV-19/South Korea/KDCA237249/2023 | V | 929 | L | 49 | 20230503 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | V | 929 | A | 69 | 20240904 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | V | 929 | S | 40 | 20240105 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | V | 929 | K | 1 | 20200814 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | V | 929 | N | 5 | 20220703 |
| EPI_ISL_3411126 | NSP3 | hCoV-19/USA/WA-CDC-UW21073080183/2021 | V | 929 | stop | 1 | 20210730 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | V | 929 | C | 4 | 20221031 |
| EPI_ISL_16599636 | NSP3 | hCoV-19/USA/TX-HMH-122953/2023 | V | 929 | M | 13 | 20230109 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | V | 929 | insP | 5 | 20220104 |
| EPI_ISL_12220144 | NSP3 | hCoV-19/Ecuador/INSPI-L2B/2022 | V | 929 | P | 3 | 20220119 |
| EPI_ISL_7832662 | NSP3 | hCoV-19/USA/ID-IBL-775212/2021 | V | 929 | E | 4 | 20211205 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | V | 929 | del | 38 | 20240316 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | L | 930 | N | 5 | 20220703 |
| EPI_ISL_17425889 | NSP3 | hCoV-19/India/MH-CSIR-2891/2023 | L | 930 | E | 8 | 20230401 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | L | 930 | I | 8 | 20230217 |
| EPI_ISL_19639319 | NSP3 | hCoV-19/USA/NY-NYULH-21613/2024 | L | 930 | V | 204 | 20241207 |
| EPI_ISL_16599636 | NSP3 | hCoV-19/USA/TX-HMH-122953/2023 | L | 930 | P | 15 | 20230109 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 930 | D | 2 | 20240904 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | L | 930 | del | 24 | 20240316 |
| EPI_ISL_19796267 | NSP3 | hCoV-19/Australia/SA2467354/2025 | L | 930 | S | 307 | 20250224 |
| EPI_ISL_19826284 | NSP3 | hCoV-19/Canada/ON-HSC-202501553-v1/2025 | L | 930 | W | 94 | 20250321 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | L | 930 | stop | 38 | 20230401 |
| EPI_ISL_19189499 | NSP3 | hCoV-19/Japan/FR016-0088/2024 | L | 930 | F | 200 | 20240511 |
| EPI_ISL_19578231 | NSP3 | hCoV-19/Botswana/R242B05_BHP/2024 | L | 930 | M | 595 | 20241126 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 930 | K | 1 | 20220210 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | L | 930 | H | 1 | 20200715 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | L | 930 | insERGVstop | 1 | 20210812 |
| EPI_ISL_17021230 | NSP3 | hCoV-19/Chile/RM-199209/2021 | L | 930 | A | 1 | 20211227 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | N | 931 | L | 1 | 20200715 |
| EPI_ISL_19752821 | NSP3 | hCoV-19/Brazil/AC-IEC-002363/2024 | N | 931 | S | 553 | 20241227 |
| EPI_ISL_18363476 | NSP3 | hCoV-19/France/HDF-IPP21682/2023 | N | 931 | T | 43 | 20230925 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | N | 931 | G | 3 | 20211015 |
| EPI_ISL_19612971 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YFSQK/2024 | N | 931 | D | 145 | 20241122 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | N | 931 | A | 4 | 20221230 |
| EPI_ISL_19562868 | NSP3 | hCoV-19/Netherlands/UT-RIVM-143352/2024 | N | 931 | K | 120 | 20241010 |
| EPI_ISL_16585029 | NSP3 | hCoV-19/Singapore/R5MR125/2023 | N | 931 | B | 3 | 20230115 |
| EPI_ISL_17465068 | NSP3 | hCoV-19/South Africa/NICD-N54464/2023 | N | 931 | I | 5 | 20230314 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | N | 931 | del | 24 | 20240316 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | N | 931 | Q | 14 | 20230605 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 931 | C | 2 | 20220210 |
| EPI_ISL_17425889 | NSP3 | hCoV-19/India/MH-CSIR-2891/2023 | N | 931 | R | 14 | 20230401 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | N | 931 | Y | 16 | 20231218 |
| EPI_ISL_13821622 | NSP3 | hCoV-19/USA/NY-PBRI-NYC22JY010/2022 | N | 931 | V | 2 | 20220704 |
| EPI_ISL_19538387 | NSP3 | hCoV-19/Canada/ON-PHL-202420323/2024 | N | 931 | H | 16 | 20241101 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | N | 931 | stop | 13 | 20220104 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | N | 931 | E | 15 | 20220703 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | N | 931 | insstop | 1 | 20210825 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | V | 932 | Y | 7 | 20221230 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | V | 932 | D | 1 | 20211015 |
| EPI_ISL_13563927 | NSP3 | hCoV-19/USA/ID-IBL-824817/2022 | V | 932 | R | 9 | 20220602 |
| EPI_ISL_19824739 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-032044/2025 | V | 932 | L | 773 | 20250325 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | V | 932 | N | 34 | 20210419 |
| EPI_ISL_16599636 | NSP3 | hCoV-19/USA/TX-HMH-122953/2023 | V | 932 | stop | 5 | 20230109 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | V | 932 | insHTGTGQAIT | 1 | 20210106 |
| EPI_ISL_19784440 | NSP3 | hCoV-19/New Zealand/25YA0704/2025 | V | 932 | M | 1532 | 20250306 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | V | 932 | I | 19 | 20230605 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | V | 932 | insWTTADNPstop | 13 | 20230401 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | V | 932 | insG | 1 | 20200721 |
| EPI_ISL_19806400 | NSP3 | hCoV-19/Canada/ON-HRL-20251018919878-v1/2025 | V | 932 | A | 60240 | 20250223 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | V | 932 | W | 23 | 20230401 |
| EPI_ISL_17425889 | NSP3 | hCoV-19/India/MH-CSIR-2891/2023 | V | 932 | G | 12 | 20230401 |
| EPI_ISL_2695990 | NSP3 | hCoV-19/USA/AZ-ASPHL-1155/2020 | V | 932 | insWTTADNXX | 1 | 20200612 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | V | 932 | del | 27 | 20240904 |
| EPI_ISL_10902179 | NSP3 | hCoV-19/France/IDF-HMN-22022070404/2022 | V | 932 | Q | 6 | 20220131 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | V | 932 | K | 6 | 20210909 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 932 | F | 3 | 20220210 |
| EPI_ISL_19503203 | NSP3 | hCoV-19/USA/CA-CDPH-500142228/2024 | V | 932 | E | 102 | 20240826 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | V | 932 | H | 1 | 20220509 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | V | 932 | T | 16 | 20230217 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | V | 933 | C | 33 | 20230401 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | V | 933 | insRNPstopG | 34 | 20210419 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | V | 933 | Q | 1 | 20210909 |
| EPI_ISL_19282780 | NSP3 | hCoV-19/USA/NY-NYULH-20138/2024 | V | 933 | M | 159 | 20240715 |
| EPI_ISL_18770754 | NSP3 | hCoV-19/USA/NY-PBRI-2024J008/2023 | V | 933 | W | 20 | 20231218 |
| EPI_ISL_17425889 | NSP3 | hCoV-19/India/MH-CSIR-2891/2023 | V | 933 | insstopNLWTTADNPstopG | 4 | 20230401 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | V | 933 | I | 7 | 20230217 |
| EPI_ISL_16599636 | NSP3 | hCoV-19/USA/TX-HMH-122953/2023 | V | 933 | insLAKESstopTW | 5 | 20230109 |
| EPI_ISL_3756579 | NSP3 | hCoV-19/Brazil/RS-LMM62336/2021 | V | 933 | R | 52 | 20210813 |
| EPI_ISL_7493997 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081621-987/2021 | V | 933 | insDNSRHPstopG | 1 | 20210816 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | V | 933 | T | 2 | 20220509 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | V | 933 | insAKESstopTW | 1 | 20210803 |
| EPI_ISL_17021230 | NSP3 | hCoV-19/Chile/RM-199209/2021 | V | 933 | Y | 1 | 20211227 |
| EPI_ISL_19831430 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56931/2025 | V | 933 | L | 276 | 20250406 |
| EPI_ISL_12581362 | NSP3 | hCoV-19/Turkey/HSGM-GS2238/2022 | V | 933 | E | 1 | 20220405 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | V | 933 | del | 39 | 20240904 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | V | 933 | S | 39 | 20210419 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | V | 933 | insTTADNPstopG | 5 | 20220602 |
| EPI_ISL_19489822 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004432003/2024 | V | 933 | A | 50 | 20240729 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 933 | F | 1 | 20210318 |
| EPI_ISL_3893646 | NSP3 | hCoV-19/USA/OR-UofO-MAP000561/2021 | V | 933 | insDLHR | 1 | 20210805 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | V | 933 | P | 18 | 20230605 |
| EPI_ISL_12220144 | NSP3 | hCoV-19/Ecuador/INSPI-L2B/2022 | V | 933 | stop | 3 | 20220119 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | V | 933 | G | 37 | 20230401 |
| EPI_ISL_17052107 | NSP3 | hCoV-19/USA/TX-UTEP-B002533477/2022 | C | 934 | F | 3 | 20220711 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | C | 934 | T | 5 | 20210328 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | C | 934 | G | 4 | 20220728 |
| EPI_ISL_17021230 | NSP3 | hCoV-19/Chile/RM-199209/2021 | C | 934 | M | 1 | 20211227 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | C | 934 | A | 5 | 20220104 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | C | 934 | N | 5 | 20221230 |
| EPI_ISL_14388484 | NSP3 | hCoV-19/Australia/QLD0x010800/2022 | C | 934 | R | 8 | 20220718 |
| EPI_ISL_16407944 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1112/2022 | C | 934 | Y | 3 | 20221119 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | C | 934 | del | 42 | 20240904 |
| EPI_ISL_19459304 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242961/2024 | C | 934 | stop | 11 | 20240719 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | C | 934 | V | 45 | 20230401 |
| EPI_ISL_12321617 | NSP3 | hCoV-19/Turkey/HSGM-GS2551/2022 | C | 934 | L | 7 | 20220405 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | C | 934 | I | 10 | 20230401 |
| EPI_ISL_3922866 | NSP3 | hCoV-19/USA/ID-IBL-749082/2021 | C | 934 | insS | 1 | 20210813 |
| EPI_ISL_12955408 | NSP3 | hCoV-19/Russia/LIP-CRIE-7730694413/2022 | C | 934 | S | 55 | 20220215 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | C | 934 | insA | 1 | 20200814 |
| EPI_ISL_9873639 | NSP3 | hCoV-19/Thailand/NIC_BKK_SEQ1009/2022 | C | 934 | W | 2 | 20220102 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | C | 934 | K | 5 | 20220509 |
| EPI_ISL_8724991 | NSP3 | hCoV-19/Colombia/VAC-UV-20030255/2022 | C | 934 | insV | 3 | 20220103 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | C | 934 | Q | 1 | 20211015 |
| EPI_ISL_16599636 | NSP3 | hCoV-19/USA/TX-HMH-122953/2023 | K | 935 | V | 6 | 20230109 |
| EPI_ISL_18209279 | NSP3 | hCoV-19/England/CLIMB-CM7YFZAC/2023 | K | 935 | I | 143 | 20230818 |
| EPI_ISL_17592096 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3020/2023 | K | 935 | stop | 19 | 20230410 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | K | 935 | P | 1 | 20210106 |
| EPI_ISL_10467178 | NSP3 | hCoV-19/England/MILK-37E88CA/2022 | K | 935 | Q | 4 | 20220221 |
| EPI_ISL_19788218 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-433/2025 | K | 935 | R | 386 | 20250110 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | K | 935 | F | 1 | 20220721 |
| EPI_ISL_19079631 | NSP3 | hCoV-19/South Korea/KDCA291179/2024 | K | 935 | N | 17 | 20240403 |
| EPI_ISL_19021174 | NSP3 | hCoV-19/USA/NY-URMC-O2S1M491-1/2024 | K | 935 | E | 103 | 20240204 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | K | 935 | S | 11 | 20230401 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | K | 935 | G | 12 | 20220620 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | K | 935 | del | 37 | 20240904 |
| EPI_ISL_7832662 | NSP3 | hCoV-19/USA/ID-IBL-775212/2021 | K | 935 | A | 1 | 20211205 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | K | 935 | insRGVstop | 5 | 20210310 |
| EPI_ISL_12220144 | NSP3 | hCoV-19/Ecuador/INSPI-L2B/2022 | K | 935 | L | 2 | 20220119 |
| EPI_ISL_18165727 | NSP3 | hCoV-19/Indonesia/JB-NIHRD-W03760/2023 | K | 935 | T | 33 | 20230510 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | T | 936 | insSstopTW | 5 | 20220104 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | T | 936 | L | 52 | 20231225 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | T | 936 | H | 1 | 20230217 |
| EPI_ISL_19826030 | NSP3 | hCoV-19/Singapore/Y25R15MSC120/2025 | T | 936 | I | 11690 | 20250408 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | T | 936 | C | 1 | 20230401 |
| EPI_ISL_16599636 | NSP3 | hCoV-19/USA/TX-HMH-122953/2023 | T | 936 | K | 5 | 20230109 |
| EPI_ISL_18053944 | NSP3 | hCoV-19/USA/TN-CDC-QDX82752715/2023 | T | 936 | S | 82 | 20230712 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | T | 936 | del | 24 | 20240316 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | T | 936 | N | 5184 | 20240904 |
| EPI_ISL_16407944 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1112/2022 | T | 936 | M | 2 | 20221119 |
| EPI_ISL_11887753 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0716/2021 | T | 936 | P | 2 | 20211229 |
| EPI_ISL_19714511 | NSP3 | hCoV-19/Russia/MOS-RII-MH219614S/2024 | T | 936 | A | 270 | 20241125 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | T | 936 | D | 1 | 20220721 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | T | 936 | stop | 1 | 20220923 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | T | 936 | V | 4 | 20220121 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | T | 936 | R | 2 | 20211015 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | T | 936 | E | 24 | 20220104 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | T | 936 | W | 1 | 20220509 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 936 | G | 1 | 20220210 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | T | 936 | insL | 1 | 20211015 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | C | 937 | T | 1 | 20220923 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | C | 937 | Y | 5 | 20230401 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | C | 937 | V | 56 | 20231225 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | C | 937 | L | 49 | 20230401 |
| EPI_ISL_3033768 | NSP3 | hCoV-19/South Korea/KDCA6562/2021 | C | 937 | G | 1 | 20210706 |
| EPI_ISL_8426150 | NSP3 | hCoV-19/USA/IN-CDC-ASC210567756/2021 | C | 937 | W | 4 | 20211222 |
| EPI_ISL_7494000 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082921-1003/2021 | C | 937 | D | 2 | 20210829 |
| EPI_ISL_15891212 | NSP3 | hCoV-19/Russia/MOW-CRIE-4781906318/2022 | C | 937 | R | 16 | 20220921 |
| EPI_ISL_10907766 | NSP3 | hCoV-19/Germany/NW-RKI-I-590627/2022 | C | 937 | F | 9 | 20220215 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | C | 937 | K | 1 | 20220509 |
| EPI_ISL_19502939 | NSP3 | hCoV-19/Russia/SPE-RII-MH198589S/2024 | C | 937 | stop | 24 | 20240902 |
| EPI_ISL_17425889 | NSP3 | hCoV-19/India/MH-CSIR-2891/2023 | C | 937 | insYVH | 1 | 20230401 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | C | 937 | P | 1 | 20230217 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | C | 937 | del | 31 | 20240316 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | C | 937 | N | 2 | 20220721 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | C | 937 | A | 2 | 20220119 |
| EPI_ISL_12146193 | NSP3 | hCoV-19/Turkey/HSGM-GS1514/2022 | C | 937 | S | 6 | 20220401 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | G | 938 | K | 4 | 20230104 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | G | 938 | Y | 63 | 20240904 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | G | 938 | N | 6 | 20230401 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | G | 938 | A | 13 | 20231126 |
| EPI_ISL_18979302 | NSP3 | hCoV-19/USA/NY-CDC-LC1099536/2024 | G | 938 | R | 125 | 20240217 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | G | 938 | F | 1 | 20210909 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | G | 938 | Q | 5 | 20220703 |
| EPI_ISL_16495400 | NSP3 | hCoV-19/USA/UT-UPHL-230106226449/2022 | G | 938 | E | 24 | 20221227 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | G | 938 | V | 56 | 20230401 |
| EPI_ISL_16407944 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1112/2022 | G | 938 | I | 1 | 20221119 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | G | 938 | D | 55 | 20231225 |
| EPI_ISL_2695902 | NSP3 | hCoV-19/USA/AZ-ASPHL-2205/2021 | G | 938 | insXXFL | 1 | 20210427 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 938 | C | 1 | 20210318 |
| EPI_ISL_11324391 | NSP3 | hCoV-19/India/MP-NCDC-5009339/2021 | G | 938 | insXXXXXXXXXEAV | 1 | 20210630 |
| EPI_ISL_12220144 | NSP3 | hCoV-19/Ecuador/INSPI-L2B/2022 | G | 938 | T | 5 | 20220119 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | G | 938 | del | 35 | 20240316 |
| EPI_ISL_19261461 | NSP3 | hCoV-19/England/CLIMB-CM7YK5NZ/2024 | G | 938 | stop | 12 | 20240629 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | G | 938 | insFRF | 5 | 20220703 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | G | 938 | S | 12 | 20220721 |
| EPI_ISL_5070922 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46980/2021 | G | 938 | insKLXXXXXYLV | 1 | 20210526 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | G | 938 | W | 10 | 20220923 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | G | 938 | L | 4 | 20210825 |
| EPI_ISL_18681990 | NSP3 | hCoV-19/Brazil/GO-HLAGYN-2399642/2023 | Q | 939 | P | 47 | 20231211 |
| EPI_ISL_19749776 | NSP3 | hCoV-19/USA/MA-CDC-LC1132656/2025 | Q | 939 | R | 204 | 20250211 |
| EPI_ISL_14032106 | NSP3 | hCoV-19/France/IDF-AphpSA-CD000870/2022 | Q | 939 | Y | 12 | 20220620 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | Q | 939 | del | 36 | 20240316 |
| EPI_ISL_17275291 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45816/2023 | Q | 939 | V | 63 | 20230217 |
| EPI_ISL_19793483 | NSP3 | hCoV-19/Spain/CB-HUMV-5453086/2025 | Q | 939 | L | 544 | 20250313 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | Q | 939 | E | 17 | 20221230 |
| EPI_ISL_16407944 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1112/2022 | Q | 939 | T | 11 | 20221119 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Q | 939 | I | 1 | 20230104 |
| EPI_ISL_19429122 | NSP3 | hCoV-19/USA/NY-URMC-O8S1Q954-1/2024 | Q | 939 | K | 52 | 20240831 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | Q | 939 | N | 57 | 20231225 |
| EPI_ISL_7547076 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101921-1045/2021 | Q | 939 | D | 1 | 20211019 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Q | 939 | S | 4 | 20231126 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | Q | 939 | insL | 3 | 20220104 |
| EPI_ISL_19187570 | NSP3 | hCoV-19/Spain/AR-HCULB-00011315/2024 | Q | 939 | H | 47 | 20240520 |
| EPI_ISL_11324391 | NSP3 | hCoV-19/India/MP-NCDC-5009339/2021 | Q | 939 | M | 2 | 20210630 |
| EPI_ISL_12220144 | NSP3 | hCoV-19/Ecuador/INSPI-L2B/2022 | Q | 939 | W | 2 | 20220119 |
| EPI_ISL_13395622 | NSP3 | hCoV-19/USA/UT-UPHL-220619124151/2022 | Q | 939 | stop | 13 | 20220601 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | Q | 940 | V | 6 | 20230217 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | Q | 940 | M | 1 | 20210909 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Q | 940 | A | 5 | 20240904 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | Q | 940 | S | 57 | 20231225 |
| EPI_ISL_19712416 | NSP3 | hCoV-19/France/PAC-RELAB-HCL725000017701/2025 | Q | 940 | K | 137 | 20250118 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | Q | 940 | del | 35 | 20240316 |
| EPI_ISL_19139109 | NSP3 | hCoV-19/France/GES-RELAB-IPP05338/2024 | Q | 940 | E | 54 | 20240409 |
| EPI_ISL_10817278 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-78086/2022 | Q | 940 | stop | 4 | 20220109 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | Q | 940 | F | 2 | 20220801 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | Q | 940 | G | 2 | 20230401 |
| EPI_ISL_19528660 | NSP3 | hCoV-19/Canada/QC-L00806683001/2024 | Q | 940 | H | 3161 | 20241027 |
| EPI_ISL_17524116 | NSP3 | hCoV-19/USA/IL-CDC-LC1036749/2023 | Q | 940 | L | 98 | 20230404 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | Q | 940 | D | 1 | 20210106 |
| EPI_ISL_19618718 | NSP3 | hCoV-19/Hungary/102202-UPL24-005058/2024 | Q | 940 | R | 1039 | 20241001 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | Q | 940 | N | 3 | 20220222 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | Q | 940 | W | 2 | 20230401 |
| EPI_ISL_17349542 | NSP3 | hCoV-19/India/KA-VRDL-33280/2023 | Q | 940 | insFG | 1 | 20230223 |
| EPI_ISL_11324391 | NSP3 | hCoV-19/India/MP-NCDC-5009339/2021 | Q | 940 | Y | 1 | 20210630 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | Q | 940 | T | 9 | 20220321 |
| EPI_ISL_2881346 | NSP3 | hCoV-19/India/PB-IGIB-302700647991/2021 | Q | 940 | Z | 4 | 20210426 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | Q | 941 | del | 30 | 20240316 |
| EPI_ISL_13736273 | NSP3 | hCoV-19/Chile/RM-82171/2022 | Q | 941 | A | 13 | 20220701 |
| EPI_ISL_16510322 | NSP3 | hCoV-19/Chile/RM-265/2023 | Q | 941 | E | 9 | 20230103 |
| EPI_ISL_19804288 | NSP3 | hCoV-19/Ireland/D-SVUH-FBA52164-004/2025 | Q | 941 | H | 483 | 20250226 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | Q | 941 | insNGL | 1 | 20220509 |
| EPI_ISL_18373479 | NSP3 | hCoV-19/England/CLIMB-CM7YESMB/2023 | Q | 941 | K | 62 | 20230930 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | Q | 941 | G | 67 | 20221031 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | Q | 941 | S | 16 | 20230401 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | Q | 941 | D | 4 | 20220104 |
| EPI_ISL_11324391 | NSP3 | hCoV-19/India/MP-NCDC-5009339/2021 | Q | 941 | M | 1 | 20210630 |
| EPI_ISL_19662629 | NSP3 | hCoV-19/Singapore/R60MQ120/2024 | Q | 941 | R | 620 | 20241106 |
| EPI_ISL_2695902 | NSP3 | hCoV-19/USA/AZ-ASPHL-2205/2021 | Q | 941 | insXXXXXXXXW | 1 | 20210427 |
| EPI_ISL_19477045 | NSP3 | hCoV-19/Ireland/D-SVUH-FAZ95317-081/2024 | Q | 941 | L | 692 | 20241007 |
| EPI_ISL_1752328 | NSP3 | hCoV-19/Germany/BY-MVP-000003924/2021 | Q | 941 | Z | 1 | 20210216 |
| EPI_ISL_19664600 | NSP3 | hCoV-19/USA/DE-DHSS-667/2024 | Q | 941 | P | 46 | 20241213 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | Q | 941 | T | 3 | 20240904 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Q | 941 | Y | 2 | 20231126 |
| EPI_ISL_3756621 | NSP3 | hCoV-19/USA/ID-IBL-744725/2021 | Q | 941 | W | 1 | 20210802 |
| EPI_ISL_18914991 | NSP3 | hCoV-19/env/Ukraine/81348/2023 | Q | 941 | stop | 14 | 20231030 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | Q | 941 | V | 3 | 20230217 |
| EPI_ISL_11887753 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0716/2021 | T | 942 | L | 2 | 20211229 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | T | 942 | Q | 62 | 20231225 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | T | 942 | G | 3 | 20230217 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 942 | D | 8 | 20221012 |
| EPI_ISL_19795238 | NSP3 | hCoV-19/USA/VA-CDC-LC1135476/2025 | T | 942 | I | 8184 | 20250311 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | T | 942 | N | 5 | 20220121 |
| EPI_ISL_15102639 | NSP3 | hCoV-19/Italy/EMR-BO_1942/2022 | T | 942 | S | 22 | 20220915 |
| EPI_ISL_3790551 | NSP3 | hCoV-19/Sweden/10037769/2021 | T | 942 | Y | 1 | 20210322 |
| EPI_ISL_17425889 | NSP3 | hCoV-19/India/MH-CSIR-2891/2023 | T | 942 | F | 16 | 20230401 |
| EPI_ISL_15919324 | NSP3 | hCoV-19/Russia/PRI-RII-MH109086S/2022 | T | 942 | P | 4 | 20221011 |
| EPI_ISL_19766355 | NSP3 | hCoV-19/Brazil/PA-IEC-25-004781/2025 | T | 942 | K | 227 | 20250107 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | T | 942 | H | 61 | 20221031 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | T | 942 | V | 1 | 20210825 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | T | 942 | M | 4 | 20230217 |
| EPI_ISL_19595154 | NSP3 | hCoV-19/Yunnan/YNCDC-1371/2024 | T | 942 | R | 27 | 20240614 |
| EPI_ISL_11355421 | NSP3 | hCoV-19/France/GES-ChNa-210059857801/2021 | T | 942 | E | 11 | 20210719 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | T | 942 | stop | 10 | 20230401 |
| EPI_ISL_19755212 | NSP3 | hCoV-19/USA/MA-MASPHL-13545/2025 | T | 942 | A | 191 | 20250121 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | T | 942 | del | 25 | 20240316 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | T | 943 | Q | 1 | 20240414 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | T | 943 | G | 1 | 20220721 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | T | 943 | K | 13 | 20221210 |
| EPI_ISL_19783889 | NSP3 | hCoV-19/Canada/AB-ABPHL-131318/2025 | T | 943 | I | 2117 | 20250219 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | T | 943 | insstopY | 1 | 20220121 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | T | 943 | W | 1 | 20220728 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | T | 943 | L | 20 | 20240904 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | T | 943 | P | 66 | 20231225 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | T | 943 | insY | 1 | 20220105 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 943 | V | 4 | 20221012 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | T | 943 | del | 36 | 20240316 |
| EPI_ISL_19355451 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004415465/2024 | T | 943 | S | 21 | 20240124 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | T | 943 | stop | 2 | 20210909 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | T | 943 | insDN | 1 | 20230401 |
| EPI_ISL_19804743 | NSP3 | hCoV-19/USA/NY-NYULH-22432/2025 | T | 943 | N | 200 | 20250320 |
| EPI_ISL_17372579 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2519/2022 | T | 943 | M | 1 | 20221229 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | T | 943 | F | 7 | 20230401 |
| EPI_ISL_19605378 | NSP3 | hCoV-19/USA/MN-MDH-44323/2024 | T | 943 | A | 232 | 20241123 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | T | 943 | insSRQP | 1 | 20210815 |
| EPI_ISL_17275356 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45882/2023 | T | 943 | C | 2 | 20230217 |
| EPI_ISL_12320692 | NSP3 | hCoV-19/Turkey/HSGM-GS2129/2022 | T | 943 | H | 3 | 20220410 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | T | 943 | insWC | 8 | 20230401 |
| EPI_ISL_19691298 | NSP3 | hCoV-19/env/Germany/BY-LGL-6461152/2025 | L | 944 | P | 17 | 20250108 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | L | 944 | del | 53 | 20240316 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 944 | D | 1 | 20210318 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | L | 944 | stop | 3 | 20220321 |
| EPI_ISL_17425889 | NSP3 | hCoV-19/India/MH-CSIR-2891/2023 | L | 944 | M | 12 | 20230401 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | L | 944 | insstopTIstop | 1 | 20230401 |
| EPI_ISL_14366980 | NSP3 | hCoV-19/India/MH-NCCS-C262109/2022 | L | 944 | S | 1 | 20220102 |
| EPI_ISL_19507696 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10149703/2024 | L | 944 | J | 23 | 20240925 |
| EPI_ISL_16510322 | NSP3 | hCoV-19/Chile/RM-265/2023 | L | 944 | K | 8 | 20230103 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | L | 944 | Y | 1 | 20221210 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 944 | E | 5 | 20220812 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | L | 944 | C | 2 | 20220728 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | L | 944 | Q | 2 | 20220801 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | L | 944 | insLstopTIstop | 59 | 20221031 |
| EPI_ISL_18861979 | NSP3 | hCoV-19/USA/WA-CDC-QDX91833019/2024 | L | 944 | H | 33 | 20240122 |
| EPI_ISL_19163044 | NSP3 | hCoV-19/USA/NY-WMC-6046/2024 | L | 944 | V | 39 | 20240121 |
| EPI_ISL_14366975 | NSP3 | hCoV-19/India/MH-NCCS-C265434/2022 | L | 944 | insstopH | 1 | 20220108 |
| EPI_ISL_19695583 | NSP3 | hCoV-19/USA/NE-NPHL-RP250447/2024 | L | 944 | R | 66 | 20241224 |
| EPI_ISL_19786227 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12622-P0/2025 | L | 944 | F | 2047 | 20250227 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | L | 944 | N | 2 | 20220121 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | L | 944 | W | 1 | 20221224 |
| EPI_ISL_19517867 | NSP3 | hCoV-19/Denmark/DCGC-690124/2024 | L | 944 | I | 1189 | 20241014 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | L | 944 | A | 3 | 20220119 |
| EPI_ISL_19799643 | NSP3 | hCoV-19/USA/TX-HMH-M-147769/2025 | K | 945 | N | 4019 | 20250303 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | K | 945 | del | 44 | 20240904 |
| EPI_ISL_11324391 | NSP3 | hCoV-19/India/MP-NCDC-5009339/2021 | K | 945 | insLTT | 1 | 20210630 |
| EPI_ISL_14152583 | NSP3 | hCoV-19/Canada/un-NML-466746/2022 | K | 945 | G | 6 | 20220711 |
| EPI_ISL_19799641 | NSP3 | hCoV-19/USA/TX-HMH-M-147779/2025 | K | 945 | R | 2008 | 20250315 |
| EPI_ISL_12146153 | NSP3 | hCoV-19/Turkey/HSGM-GS1677/2022 | K | 945 | D | 3 | 20220401 |
| EPI_ISL_17372579 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2519/2022 | K | 945 | V | 4 | 20221229 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | K | 945 | S | 5 | 20230217 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | K | 945 | L | 1 | 20210909 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 945 | F | 1 | 20210318 |
| EPI_ISL_19823414 | NSP3 | hCoV-19/Japan/FR021-0272/2025 | K | 945 | M | 82 | 20250318 |
| EPI_ISL_19377918 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55010/2024 | K | 945 | T | 138 | 20240819 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | K | 945 | Q | 12 | 20220812 |
| EPI_ISL_8194882 | NSP3 | hCoV-19/Egypt/NRC-6352/2020 | K | 945 | insVstopKLLCT | 1 | 20200726 |
| EPI_ISL_19512135 | NSP3 | hCoV-19/USA/UT-UPHL-241025190926/2024 | K | 945 | stop | 7 | 20241006 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | K | 945 | A | 2 | 20210730 |
| EPI_ISL_11815203 | NSP3 | hCoV-19/Finland/THL-202208639/2022 | K | 945 | Y | 1 | 20220314 |
| EPI_ISL_6357248 | NSP3 | hCoV-19/Romania/33055/2021 | K | 945 | insVWAHFLMNNstopE | 1 | 20210104 |
| EPI_ISL_3756621 | NSP3 | hCoV-19/USA/ID-IBL-744725/2021 | K | 945 | insNPstop | 1 | 20210802 |
| EPI_ISL_19641409 | NSP3 | hCoV-19/USA/UT-UPHL-241230633490/2024 | K | 945 | E | 303 | 20241218 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | K | 945 | H | 1 | 20240414 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | G | 946 | Q | 3 | 20221210 |
| EPI_ISL_19632260 | NSP3 | hCoV-19/Canada/ON-PHL-202425178/2024 | G | 946 | S | 1644 | 20241216 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | G | 946 | insstopRSCstop | 1 | 20200814 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | G | 946 | Y | 3 | 20210812 |
| EPI_ISL_19760467 | NSP3 | hCoV-19/USA/DE-CDC-LC1133381/2025 | G | 946 | D | 109 | 20250221 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | G | 946 | P | 3 | 20220104 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | G | 946 | R | 63 | 20230401 |
| EPI_ISL_14366975 | NSP3 | hCoV-19/India/MH-NCCS-C265434/2022 | G | 946 | K | 1 | 20220108 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | G | 946 | L | 9 | 20230401 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | G | 946 | W | 3 | 20220509 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | G | 946 | T | 3 | 20221012 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | G | 946 | M | 1 | 20230217 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | G | 946 | del | 42 | 20240904 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | G | 946 | N | 15 | 20240414 |
| EPI_ISL_19416815 | NSP3 | hCoV-19/USA/UT-UPHL-240913542467/2024 | G | 946 | C | 227 | 20240829 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | G | 946 | stop | 1 | 20220321 |
| EPI_ISL_3668634 | NSP3 | hCoV-19/Uzbekistan/Tashkent-CGB-45/2021 | G | 946 | H | 1 | 20210723 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | G | 946 | V | 27 | 20230401 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | G | 946 | I | 1 | 20220119 |
| EPI_ISL_11815203 | NSP3 | hCoV-19/Finland/THL-202208639/2022 | G | 946 | A | 6 | 20220314 |
| EPI_ISL_12308594 | NSP3 | hCoV-19/Russia/RYA-CRIE-7725529936/2022 | G | 946 | E | 2 | 20220128 |
| EPI_ISL_8806471 | NSP3 | hCoV-19/India/GA-NCCS-211930034/2021 | V | 947 | insXXXXXXXXVstop | 1 | 20210712 |
| EPI_ISL_18255148 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-08/2023 | V | 947 | M | 6 | 20230316 |
| EPI_ISL_19818388 | NSP3 | hCoV-19/France/HDF-RELAB-IPP03727/2025 | V | 947 | I | 1485 | 20250313 |
| EPI_ISL_17372579 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2519/2022 | V | 947 | T | 2 | 20221229 |
| EPI_ISL_2695902 | NSP3 | hCoV-19/USA/AZ-ASPHL-2205/2021 | V | 947 | insXXXX | 1 | 20210427 |
| EPI_ISL_5307566 | NSP3 | hCoV-19/USA/NY-PA-PBRI-CT-956/2021 | V | 947 | insLKGV | 1 | 20211004 |
| EPI_ISL_19009754 | NSP3 | hCoV-19/Australia/QLD0x01418A/2024 | V | 947 | G | 12 | 20240309 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | V | 947 | H | 1 | 20220121 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | V | 947 | K | 1 | 20210909 |
| EPI_ISL_16120995 | NSP3 | hCoV-19/USA/MA-NEIDL-07397/2022 | V | 947 | insstop | 1 | 20220708 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | V | 947 | Q | 2 | 20220105 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | V | 947 | stop | 29 | 20230401 |
| EPI_ISL_19647309 | NSP3 | hCoV-19/Canada/ON-PHL-202426604/2024 | V | 947 | A | 80 | 20241228 |
| EPI_ISL_14366980 | NSP3 | hCoV-19/India/MH-NCCS-C262109/2022 | V | 947 | P | 1 | 20220102 |
| EPI_ISL_12583837 | NSP3 | hCoV-19/Turkey/HSGM-GS2733/2022 | V | 947 | E | 1 | 20220407 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | V | 947 | insstopNLWT | 1 | 20211222 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | V | 947 | S | 2 | 20220321 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | V | 947 | insGHTFLstopTIstopERC | 1 | 20210201 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | V | 947 | N | 1 | 20240414 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | V | 947 | C | 71 | 20230401 |
| EPI_ISL_13563927 | NSP3 | hCoV-19/USA/ID-IBL-824817/2022 | V | 947 | R | 4 | 20220602 |
| EPI_ISL_19793478 | NSP3 | hCoV-19/Spain/CB-HUMV-5437601/2025 | V | 947 | L | 337 | 20250301 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | V | 947 | del | 41 | 20240904 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | E | 948 | V | 6 | 20220812 |
| EPI_ISL_19204140 | NSP3 | hCoV-19/England/CLIMB-CM7YFQ48/2024 | E | 948 | Z | 8 | 20240604 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 948 | N | 6 | 20220210 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | E | 948 | del | 55 | 20240904 |
| EPI_ISL_17425889 | NSP3 | hCoV-19/India/MH-CSIR-2891/2023 | E | 948 | R | 27 | 20230401 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | E | 948 | insNSRQP | 1 | 20210628 |
| EPI_ISL_12918864 | NSP3 | hCoV-19/Japan/0419-59048/2022 | E | 948 | W | 2 | 20220419 |
| EPI_ISL_19462641 | NSP3 | hCoV-19/Spain/MC-HCUVA-11809474/2024 | E | 948 | A | 197 | 20240821 |
| EPI_ISL_18743549 | NSP3 | hCoV-19/USA/TX-HMH-M-136447/2023 | E | 948 | stop | 105 | 20231218 |
| EPI_ISL_16157832 | NSP3 | hCoV-19/Chile/RM-131982/2022 | E | 948 | Q | 21 | 20221127 |
| EPI_ISL_19832939 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022794_01/2025 | E | 948 | D | 794 | 20250303 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | E | 948 | H | 8 | 20240414 |
| EPI_ISL_3668634 | NSP3 | hCoV-19/Uzbekistan/Tashkent-CGB-45/2021 | E | 948 | I | 1 | 20210723 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | E | 948 | insNLWTTADNPstopRCR | 1 | 20210803 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | E | 948 | S | 77 | 20230401 |
| EPI_ISL_15008326 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1261/2021 | E | 948 | F | 1 | 20211007 |
| EPI_ISL_16407944 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1112/2022 | E | 948 | T | 5 | 20221119 |
| EPI_ISL_19649751 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YEURN/2024 | E | 948 | G | 353 | 20241212 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | E | 948 | P | 2 | 20221210 |
| EPI_ISL_19826503 | NSP3 | hCoV-19/USA/NY-PRL-250408_81A04/2025 | E | 948 | K | 380 | 20250403 |
| EPI_ISL_17372579 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2519/2022 | E | 948 | L | 4 | 20221229 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | A | 949 | D | 67 | 20230401 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | A | 949 | K | 17 | 20240414 |
| EPI_ISL_16258474 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2023/2022 | A | 949 | R | 2 | 20220801 |
| EPI_ISL_13563927 | NSP3 | hCoV-19/USA/ID-IBL-824817/2022 | A | 949 | C | 14 | 20220602 |
| EPI_ISL_17372460 | NSP3 | hCoV-19/India/TN-SPHL-2903/2023 | A | 949 | P | 24 | 20230313 |
| EPI_ISL_8688196 | NSP3 | hCoV-19/Spain/AS-262164926/2021 | A | 949 | W | 1 | 20211026 |
| EPI_ISL_10817735 | NSP3 | hCoV-19/Canada/ON-PHL-22-09890/2022 | A | 949 | G | 7 | 20220222 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | A | 949 | N | 7 | 20220703 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | A | 949 | insDNPstopGRRSstopK | 1 | 20210825 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | A | 949 | E | 3 | 20230217 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | A | 949 | Y | 3 | 20221012 |
| EPI_ISL_16407944 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1112/2022 | A | 949 | F | 4 | 20221119 |
| EPI_ISL_19528676 | NSP3 | hCoV-19/Canada/QC-L00806632001/2024 | A | 949 | V | 50 | 20241027 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | A | 949 | del | 69 | 20240812 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | A | 949 | T | 312 | 20240904 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | A | 949 | insPF | 1 | 20220105 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | A | 949 | L | 32 | 20230401 |
| EPI_ISL_19756531 | NSP3 | hCoV-19/Russia/SPE-RII-MH223213S/2024 | A | 949 | S | 272 | 20241219 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | V | 950 | P | 2 | 20220302 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | V | 950 | S | 1 | 20210520 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | V | 950 | stop | 5 | 20220104 |
| EPI_ISL_11381141 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-4024/2022 | V | 950 | D | 3 | 20220108 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | V | 950 | C | 19 | 20220923 |
| EPI_ISL_19792173 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YR7AH/2025 | V | 950 | I | 1395 | 20250302 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | V | 950 | del | 65 | 20240812 |
| EPI_ISL_10924156 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11583/2022 | V | 950 | M | 2 | 20220226 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | V | 950 | L | 50 | 20240904 |
| EPI_ISL_18743640 | NSP3 | hCoV-19/USA/TX-HMH-M-136708/2023 | V | 950 | A | 9 | 20231224 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | V | 950 | H | 7 | 20221210 |
| EPI_ISL_13821622 | NSP3 | hCoV-19/USA/NY-PBRI-NYC22JY010/2022 | V | 950 | G | 2 | 20220704 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | V | 950 | N | 1 | 20220509 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | V | 950 | R | 1 | 20210628 |
| EPI_ISL_13563927 | NSP3 | hCoV-19/USA/ID-IBL-824817/2022 | V | 950 | Y | 8 | 20220602 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | V | 950 | T | 66 | 20240414 |
| EPI_ISL_10307269 | NSP3 | hCoV-19/USA/TN-ASC-210592142/2022 | V | 950 | F | 9 | 20220116 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | V | 950 | Q | 1 | 20211015 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | M | 951 | stop | 2 | 20220728 |
| EPI_ISL_17034724 | NSP3 | hCoV-19/Canada/QC-L00587109001/2023 | M | 951 | R | 8 | 20230213 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | M | 951 | insTTADNPstopG | 2 | 20220703 |
| EPI_ISL_17230095 | NSP3 | hCoV-19/South Korea/KDCA220661/2023 | M | 951 | K | 15 | 20230304 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | M | 951 | C | 27 | 20230401 |
| EPI_ISL_19819746 | NSP3 | hCoV-19/Singapore/Y25R14MSC17/2025 | M | 951 | V | 3194 | 20250327 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | M | 951 | Q | 1 | 20210806 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | M | 951 | W | 3 | 20220703 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | M | 951 | P | 2 | 20221210 |
| EPI_ISL_19770356 | NSP3 | hCoV-19/Singapore/Y25R10MSC18/2025 | M | 951 | I | 4405 | 20250228 |
| EPI_ISL_12582717 | NSP3 | hCoV-19/Turkey/HSGM-G8459/2022 | M | 951 | G | 2 | 20220401 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | M | 951 | del | 63 | 20240812 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | M | 951 | S | 3 | 20240414 |
| EPI_ISL_19750304 | NSP3 | hCoV-19/Canada/QC-L00842834001/2025 | M | 951 | T | 432 | 20250210 |
| EPI_ISL_14605071 | NSP3 | hCoV-19/India/OR-ILSGS19043/2022 | M | 951 | Y | 18 | 20220803 |
| EPI_ISL_10551562 | NSP3 | hCoV-19/Spain/AS-242242462/2022 | M | 951 | N | 3 | 20220220 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | M | 951 | L | 84 | 20230401 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | M | 951 | F | 8 | 20221012 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | M | 951 | D | 1 | 20221224 |
| EPI_ISL_14366954 | NSP3 | hCoV-19/India/MH-NCCS-C262392/2022 | M | 951 | insTWA | 1 | 20220103 |
| EPI_ISL_8688196 | NSP3 | hCoV-19/Spain/AS-262164926/2021 | M | 951 | A | 2 | 20211026 |
| EPI_ISL_16407944 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1112/2022 | M | 951 | H | 1 | 20221119 |
| EPI_ISL_17194054 | NSP3 | hCoV-19/Italy/LOM-ASST-69312982/2023 | Y | 952 | F | 12 | 20230306 |
| EPI_ISL_17372428 | NSP3 | hCoV-19/India/TN-SPHL-2864/2023 | Y | 952 | L | 10 | 20230303 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | Y | 952 | I | 1 | 20220302 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Y | 952 | T | 28 | 20230401 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | Y | 952 | del | 70 | 20240812 |
| EPI_ISL_18226358 | NSP3 | hCoV-19/env/India/MH-FMR_K4-59b/2023 | Y | 952 | V | 21 | 20230403 |
| EPI_ISL_13143784 | NSP3 | hCoV-19/Netherlands/GE-RIVM-101471/2022 | Y | 952 | D | 6 | 20220512 |
| EPI_ISL_10551562 | NSP3 | hCoV-19/Spain/AS-242242462/2022 | Y | 952 | A | 3 | 20220220 |
| EPI_ISL_10302139 | NSP3 | hCoV-19/USA/TN-ASC-210588827/2022 | Y | 952 | stop | 7 | 20220111 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | Y | 952 | W | 4 | 20221210 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | Y | 952 | P | 1 | 20211222 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | Y | 952 | M | 4 | 20220121 |
| EPI_ISL_17615462 | NSP3 | hCoV-19/Poland/Kce-754/2023 | Y | 952 | S | 15 | 20230413 |
| EPI_ISL_17700590 | NSP3 | hCoV-19/Brazil/MG-LBI-2516/2022 | Y | 952 | N | 38 | 20221226 |
| EPI_ISL_19719200 | NSP3 | hCoV-19/Australia/WA16737/2025 | Y | 952 | C | 108 | 20250130 |
| EPI_ISL_19765253 | NSP3 | hCoV-19/USA/NY-PRL-250225_82B01/2025 | Y | 952 | H | 580 | 20250213 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Y | 952 | Q | 5 | 20221012 |
| EPI_ISL_6275341 | NSP3 | hCoV-19/England/PHEC-3S053SC3/2021 | Y | 952 | insI | 1 | 20211101 |
| EPI_ISL_10523160 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-9828/2022 | Y | 952 | K | 3 | 20220209 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | M | 953 | insHG | 1 | 20210803 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | M | 953 | stop | 1 | 20211222 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 953 | C | 3 | 20220210 |
| EPI_ISL_19612451 | NSP3 | hCoV-19/France/GES-RELAB-IPP13335/2024 | M | 953 | L | 255 | 20241120 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | M | 953 | W | 27 | 20230401 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | M | 953 | D | 1 | 20210813 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | M | 953 | H | 21 | 20240307 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | M | 953 | insADNPstopG | 1 | 20211228 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | M | 953 | A | 1 | 20210803 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | M | 953 | S | 5 | 20221224 |
| EPI_ISL_19826300 | NSP3 | hCoV-19/Canada/ON-HSC-202501570-v1/2025 | M | 953 | V | 777 | 20250327 |
| EPI_ISL_12582712 | NSP3 | hCoV-19/Turkey/HSGM-G8553/2022 | M | 953 | K | 21 | 20220401 |
| EPI_ISL_19141212 | NSP3 | hCoV-19/Sweden/D-24-53072/2024 | M | 953 | R | 27 | 20240422 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | M | 953 | F | 2 | 20220812 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | M | 953 | Q | 2 | 20210520 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | M | 953 | del | 71 | 20240812 |
| EPI_ISL_19523119 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000543801/2024 | M | 953 | T | 1523 | 20241010 |
| EPI_ISL_19760508 | NSP3 | hCoV-19/USA/MD-CDC-LC1133810/2025 | M | 953 | I | 1238 | 20250223 |
| EPI_ISL_10551554 | NSP3 | hCoV-19/Spain/AS-242232969/2022 | M | 953 | P | 2 | 20220211 |
| EPI_ISL_16022265 | NSP3 | hCoV-19/Malaysia/IMR_LF01372/2022 | M | 953 | insDN | 1 | 20221121 |
| EPI_ISL_7945926 | NSP3 | hCoV-19/USA/NJ-CDC-ASC210712328/2021 | M | 953 | G | 5 | 20211126 |
| EPI_ISL_17680780 | NSP3 | hCoV-19/USA/CT-YPL23-1687/2023 | M | 953 | N | 4 | 20230508 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | G | 954 | A | 41 | 20230401 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | G | 954 | T | 2 | 20240307 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | G | 954 | K | 1 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 954 | P | 1 | 20210318 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | G | 954 | del | 63 | 20231126 |
| EPI_ISL_17804231 | NSP3 | hCoV-19/Italy/FVG-TS-65345632/2023 | G | 954 | C | 14 | 20230605 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | G | 954 | W | 63 | 20230401 |
| EPI_ISL_8813038 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111021-1250/2021 | G | 954 | H | 5 | 20211110 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | G | 954 | R | 3 | 20221224 |
| EPI_ISL_8619229 | NSP3 | hCoV-19/Germany/NI-IOV-60393359/2022 | G | 954 | insAstop | 1 | 20220108 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | G | 954 | N | 2 | 20220923 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | G | 954 | stop | 4 | 20210812 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 954 | E | 1 | 20220210 |
| EPI_ISL_19270087 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YR9GZ/2024 | G | 954 | S | 72 | 20240627 |
| EPI_ISL_11055046 | NSP3 | hCoV-19/India/BR-NCDC-5409284/2021 | G | 954 | insH | 5 | 20210826 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | G | 954 | L | 2 | 20230217 |
| EPI_ISL_17849923 | NSP3 | hCoV-19/Mauritius/37487/2023 | G | 954 | D | 50 | 20230515 |
| EPI_ISL_17372579 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2519/2022 | G | 954 | V | 7 | 20221229 |
| EPI_ISL_19800151 | NSP3 | hCoV-19/USA/IA-SHL-2600070/2025 | T | 955 | A | 249 | 20250317 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | T | 955 | C | 2 | 20211222 |
| EPI_ISL_13046581 | NSP3 | hCoV-19/France/IDF-AphpSA-MJ000832/2022 | T | 955 | insA | 1 | 20220509 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | T | 955 | Q | 3 | 20221224 |
| EPI_ISL_19821401 | NSP3 | hCoV-19/Hong Kong/VB25108305/2025 | T | 955 | I | 1317 | 20250328 |
| EPI_ISL_18881922 | NSP3 | hCoV-19/England/CLIMB-CM7YKWAY/2024 | T | 955 | E | 5 | 20240124 |
| EPI_ISL_18909045 | NSP3 | hCoV-19/USA/PA-DHSS-B1289759/2024 | T | 955 | S | 79 | 20240129 |
| EPI_ISL_17434184 | NSP3 | hCoV-19/Italy/LOM-ASST-69338853/2023 | T | 955 | P | 6 | 20230405 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | T | 955 | insH | 2 | 20220104 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | T | 955 | D | 3 | 20221230 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | T | 955 | del | 61 | 20231126 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | T | 955 | R | 4 | 20230217 |
| EPI_ISL_19455328 | NSP3 | hCoV-19/USA/NY-CDC-LC1122410/2024 | T | 955 | K | 36 | 20240918 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | T | 955 | stop | 63 | 20230401 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 955 | N | 9 | 20240307 |
| EPI_ISL_7451399 | NSP3 | hCoV-19/Portugal/PT22330/2021 | T | 955 | M | 36 | 20211129 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 955 | F | 1 | 20221226 |
| EPI_ISL_479754 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0083/2020 | T | 955 | insLSYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEMCIRDRYMGT | 2 | 20200617 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | T | 955 | H | 34 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 955 | V | 2 | 20220210 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | T | 955 | L | 2 | 20230217 |
| EPI_ISL_19824727 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-031914/2025 | L | 956 | I | 651 | 20250327 |
| EPI_ISL_10688374 | NSP3 | hCoV-19/England/LSPA-387DD7F/2022 | L | 956 | H | 4 | 20220226 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | L | 956 | insVD | 1 | 20210909 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | L | 956 | insLstopTIstopERCSD | 1 | 20210916 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | L | 956 | D | 2 | 20230217 |
| EPI_ISL_12320529 | NSP3 | hCoV-19/Turkey/HSGM-GS2034/2022 | L | 956 | N | 1 | 20220401 |
| EPI_ISL_14366964 | NSP3 | hCoV-19/India/MH-NCCS-C263780/2022 | L | 956 | insF | 1 | 20220104 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | L | 956 | stop | 1 | 20210806 |
| EPI_ISL_15292695 | NSP3 | hCoV-19/India/GA-NCCS-564088184/2021 | L | 956 | insFstop | 1 | 20211105 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | L | 956 | insstopER | 1 | 20210806 |
| EPI_ISL_19532294 | NSP3 | hCoV-19/Germany/BY-MVP-000025246/2024 | L | 956 | F | 149 | 20241004 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 956 | S | 3 | 20221226 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | L | 956 | Q | 2 | 20240816 |
| EPI_ISL_19558564 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55564/2024 | L | 956 | P | 160 | 20241110 |
| EPI_ISL_18508472 | NSP3 | hCoV-19/USA/IL-RIPHL_13740_G/2023 | L | 956 | R | 33 | 20230925 |
| EPI_ISL_14366980 | NSP3 | hCoV-19/India/MH-NCCS-C262109/2022 | L | 956 | C | 1 | 20220102 |
| EPI_ISL_18544911 | NSP3 | hCoV-19/France/COR-HCL023174761701/2023 | L | 956 | V | 14 | 20231030 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | L | 956 | del | 60 | 20231126 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | L | 956 | W | 5 | 20220104 |
| EPI_ISL_8813038 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111021-1250/2021 | L | 956 | insLstopT | 2 | 20211110 |
| EPI_ISL_14366978 | NSP3 | hCoV-19/India/MH-NCCS-C254960/2021 | L | 956 | insL | 1 | 20211231 |
| EPI_ISL_19687704 | NSP3 | hCoV-19/USA/NY-PRL-250108_81H06/2024 | L | 956 | J | 10 | 20241229 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | L | 956 | T | 72 | 20230401 |
| EPI_ISL_14366954 | NSP3 | hCoV-19/India/MH-NCCS-C262392/2022 | S | 957 | Q | 1 | 20220103 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | S | 957 | V | 2 | 20230217 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | S | 957 | del | 86 | 20231126 |
| EPI_ISL_14366985 | NSP3 | hCoV-19/India/MH-NCCS-C262105/2022 | S | 957 | insstop | 2 | 20220102 |
| EPI_ISL_18722719 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048292/2023 | S | 957 | I | 5 | 20231126 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | S | 957 | L | 105 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 957 | D | 2 | 20221226 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | S | 957 | Y | 6 | 20240307 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | S | 957 | N | 10 | 20230401 |
| EPI_ISL_19079080 | NSP3 | hCoV-19/Shanghai/SCDC-JS04-013/2024 | S | 957 | C | 7 | 20240303 |
| EPI_ISL_17963166 | NSP3 | hCoV-19/env/Germany/BY-LGL-5919852/2023 | S | 957 | P | 65 | 20230614 |
| EPI_ISL_14568781 | NSP3 | hCoV-19/India/MH-INSACOG-CSIR-NEERI2541/2022 | S | 957 | F | 27 | 20220711 |
| EPI_ISL_2695902 | NSP3 | hCoV-19/USA/AZ-ASPHL-2205/2021 | S | 957 | insN | 1 | 20210427 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | S | 957 | T | 9 | 20230401 |
| EPI_ISL_17682074 | NSP3 | hCoV-19/Libya/421067097/2021 | S | 957 | R | 1 | 20210219 |
| EPI_ISL_19517777 | NSP3 | hCoV-19/Denmark/DCGC-690044/2024 | S | 957 | A | 29 | 20241014 |
| EPI_ISL_14366972 | NSP3 | hCoV-19/India/MH-NCCS-C264656/2022 | S | 957 | H | 6 | 20220106 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Y | 958 | Q | 5 | 20221226 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | Y | 958 | I | 5 | 20230217 |
| EPI_ISL_19469185 | NSP3 | hCoV-19/env/Ukraine/86376/2024 | Y | 958 | H | 26 | 20240729 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 958 | N | 4 | 20240307 |
| EPI_ISL_8806276 | NSP3 | hCoV-19/India/MH-NCCS-2748700638432/2021 | Y | 958 | insstopTIstop | 1 | 20211013 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Y | 958 | del | 78 | 20231126 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | Y | 958 | insYVHG | 1 | 20211222 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | Y | 958 | insCstop | 1 | 20200701 |
| EPI_ISL_11550851 | NSP3 | hCoV-19/Scotland/QEUH-3C003C6/2022 | Y | 958 | F | 3 | 20220322 |
| EPI_ISL_18722719 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048292/2023 | Y | 958 | stop | 10 | 20231126 |
| EPI_ISL_11926303 | NSP3 | hCoV-19/England/DHSC-CYBAQ6Z/2022 | Y | 958 | insTLRV | 1 | 20220212 |
| EPI_ISL_15293844 | NSP3 | hCoV-19/India/MH-NCCS-2712210345/2021 | Y | 958 | L | 6 | 20211226 |
| EPI_ISL_14366972 | NSP3 | hCoV-19/India/MH-NCCS-C264656/2022 | Y | 958 | C | 6 | 20220106 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Y | 958 | M | 102 | 20230401 |
| EPI_ISL_15292769 | NSP3 | hCoV-19/India/GA-NCCS-3055100280225/2021 | Y | 958 | V | 1 | 20211216 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | Y | 958 | D | 2 | 20210106 |
| EPI_ISL_8193624 | NSP3 | hCoV-19/Egypt/NRC-5521NS/2020 | Y | 958 | insFLM | 1 | 20200601 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | Y | 958 | W | 3 | 20220721 |
| EPI_ISL_19334602 | NSP3 | hCoV-19/Egypt/CPHL-EGY24153/2024 | Y | 958 | S | 9 | 20240623 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 958 | A | 1 | 20220210 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | E | 959 | T | 5 | 20240816 |
| EPI_ISL_19388067 | NSP3 | hCoV-19/England/WSI-325E746F/2022 | E | 959 | Z | 2 | 20221104 |
| EPI_ISL_19819859 | NSP3 | hCoV-19/Spain/AS-HUCA-232522885/2025 | E | 959 | stop | 15 | 20250320 |
| EPI_ISL_17194054 | NSP3 | hCoV-19/Italy/LOM-ASST-69312982/2023 | E | 959 | V | 21 | 20230306 |
| EPI_ISL_8619229 | NSP3 | hCoV-19/Germany/NI-IOV-60393359/2022 | E | 959 | L | 2 | 20220108 |
| EPI_ISL_19706070 | NSP3 | hCoV-19/England/CLIMB-CM7Y8UZF/2025 | E | 959 | A | 489 | 20250120 |
| EPI_ISL_18769880 | NSP3 | hCoV-19/Shanghai/SCDC-HG1219-4227/2023 | E | 959 | K | 158 | 20231217 |
| EPI_ISL_19717824 | NSP3 | hCoV-19/Italy/SIC-AOUP-UNIPA_110109/2024 | E | 959 | D | 45 | 20241216 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | E | 959 | insI | 7 | 20230401 |
| EPI_ISL_14420029 | NSP3 | hCoV-19/Germany/NW-RKI-I-943111/2022 | E | 959 | Q | 13 | 20220804 |
| EPI_ISL_14366968 | NSP3 | hCoV-19/India/MH-NCCS-C265077/2022 | E | 959 | C | 1 | 20220107 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | E | 959 | F | 5 | 20220104 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 959 | P | 1 | 20210318 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | E | 959 | del | 109 | 20231126 |
| EPI_ISL_18226358 | NSP3 | hCoV-19/env/India/MH-FMR_K4-59b/2023 | E | 959 | H | 9 | 20230403 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | E | 959 | R | 7 | 20230401 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | E | 959 | Y | 4 | 20220121 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | E | 959 | N | 107 | 20230401 |
| EPI_ISL_19180737 | NSP3 | hCoV-19/Singapore/R24MQ134/2024 | E | 959 | G | 378 | 20240428 |
| EPI_ISL_4475523 | NSP3 | hCoV-19/USA/CA-OC-FG-090114/2021 | Q | 960 | F | 1 | 20210813 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | Q | 960 | S | 11 | 20230401 |
| EPI_ISL_19686899 | NSP3 | hCoV-19/Japan/FR050-0035/2025 | Q | 960 | K | 78 | 20250106 |
| EPI_ISL_19528965 | NSP3 | hCoV-19/Canada/AB-ABPHL-125378/2024 | Q | 960 | L | 21 | 20241016 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | Q | 960 | P | 1 | 20210106 |
| EPI_ISL_14366977 | NSP3 | hCoV-19/India/MH-NCCS-525497/2022 | Q | 960 | I | 5 | 20220102 |
| EPI_ISL_19310118 | NSP3 | hCoV-19/env/Germany/BY-LGL-6284264/2024 | Q | 960 | stop | 19 | 20240717 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Q | 960 | N | 107 | 20240816 |
| EPI_ISL_11943053 | NSP3 | hCoV-19/England/DHSC-CYDYJW9/2022 | Q | 960 | insC | 1 | 20220104 |
| EPI_ISL_11926303 | NSP3 | hCoV-19/England/DHSC-CYBAQ6Z/2022 | Q | 960 | A | 1 | 20220212 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | Q | 960 | G | 2 | 20220302 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 960 | T | 6 | 20240307 |
| EPI_ISL_11947241 | NSP3 | hCoV-19/England/DHSC-CYNOOIS/2022 | Q | 960 | C | 1 | 20220225 |
| EPI_ISL_19417573 | NSP3 | hCoV-19/Germany/BY-LGL-6334714/2024 | Q | 960 | Z | 3 | 20240826 |
| EPI_ISL_19468638 | NSP3 | hCoV-19/Canada/BC-BCCDC-735189/2024 | Q | 960 | H | 192 | 20240917 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | Q | 960 | D | 1 | 20230217 |
| EPI_ISL_14366954 | NSP3 | hCoV-19/India/MH-NCCS-C262392/2022 | Q | 960 | V | 4 | 20220103 |
| EPI_ISL_12722270 | NSP3 | hCoV-19/Canada/ON-PHL-22-21559/2022 | Q | 960 | E | 9 | 20220505 |
| EPI_ISL_19572784 | NSP3 | hCoV-19/Spain/AS-HUCA-232484071/2024 | Q | 960 | R | 213 | 20241112 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Q | 960 | del | 120 | 20231126 |
| EPI_ISL_14366980 | NSP3 | hCoV-19/India/MH-NCCS-C262109/2022 | F | 961 | insLstopH | 1 | 20220102 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | F | 961 | W | 1 | 20210916 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | F | 961 | M | 2 | 20210806 |
| EPI_ISL_19334602 | NSP3 | hCoV-19/Egypt/CPHL-EGY24153/2024 | F | 961 | S | 16 | 20240623 |
| EPI_ISL_19458524 | NSP3 | hCoV-19/Spain/ML-HCM-01648762/2024 | F | 961 | V | 29 | 20240905 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | F | 961 | Y | 4 | 20240307 |
| EPI_ISL_11926303 | NSP3 | hCoV-19/England/DHSC-CYBAQ6Z/2022 | F | 961 | insXXX | 1 | 20220212 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 961 | E | 1 | 20210318 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | F | 961 | A | 1 | 20220119 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | F | 961 | insLstopTIstop | 1 | 20211222 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | F | 961 | stop | 2 | 20220104 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | F | 961 | N | 2 | 20210106 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | F | 961 | H | 2 | 20221226 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | F | 961 | del | 105 | 20231126 |
| EPI_ISL_16755308 | NSP3 | hCoV-19/Spain/VC-CVA_CLIN-116545/2022 | F | 961 | I | 27 | 20221222 |
| EPI_ISL_19807115 | NSP3 | hCoV-19/Canada/ON-HSC-202501447-v1/2025 | F | 961 | C | 14 | 20250309 |
| EPI_ISL_15293824 | NSP3 | hCoV-19/India/GA-NCCS-617090687/2021 | F | 961 | T | 3 | 20211228 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | F | 961 | P | 6 | 20230401 |
| EPI_ISL_19763784 | NSP3 | hCoV-19/Spain/CT-BST-910121457/2025 | F | 961 | L | 782 | 20250213 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 961 | R | 1 | 20220210 |
| EPI_ISL_19620841 | NSP3 | hCoV-19/Canada/ON-PHL-202424592/2024 | K | 962 | R | 634 | 20241210 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | K | 962 | H | 1 | 20220104 |
| EPI_ISL_6357248 | NSP3 | hCoV-19/Romania/33055/2021 | K | 962 | insT | 1 | 20210104 |
| EPI_ISL_18226358 | NSP3 | hCoV-19/env/India/MH-FMR_K4-59b/2023 | K | 962 | L | 18 | 20230403 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | K | 962 | Y | 1 | 20230217 |
| EPI_ISL_15293829 | NSP3 | hCoV-19/India/MH-NCCS-2010010231/2021 | K | 962 | I | 5 | 20211226 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | K | 962 | G | 1 | 20220119 |
| EPI_ISL_16997164 | NSP3 | hCoV-19/Slovenia/23-056202-MB/2022 | K | 962 | Q | 11 | 20221020 |
| EPI_ISL_11943053 | NSP3 | hCoV-19/England/DHSC-CYDYJW9/2022 | K | 962 | insstop | 1 | 20220104 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 962 | T | 13 | 20240816 |
| EPI_ISL_19572789 | NSP3 | hCoV-19/Spain/AS-HUCA-232485417/2024 | K | 962 | N | 20 | 20241118 |
| EPI_ISL_14367003 | NSP3 | hCoV-19/India/MH-NCCS-C265107/2022 | K | 962 | insI | 12 | 20220107 |
| EPI_ISL_14366964 | NSP3 | hCoV-19/India/MH-NCCS-C263780/2022 | K | 962 | S | 18 | 20220104 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | K | 962 | E | 2 | 20240307 |
| EPI_ISL_8619229 | NSP3 | hCoV-19/Germany/NI-IOV-60393359/2022 | K | 962 | P | 3 | 20220108 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | K | 962 | del | 92 | 20231126 |
| EPI_ISL_10834704 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82384/2022 | K | 962 | M | 1 | 20220117 |
| EPI_ISL_16280304 | NSP3 | hCoV-19/India/OR-RMRC_B-ICMR-INSACOG-228717/2022 | K | 962 | stop | 7 | 20220823 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | K | 963 | insTT | 8 | 20211227 |
| EPI_ISL_3010069 | NSP3 | hCoV-19/Spain/CT-HUJ23-17488/2021 | K | 963 | M | 1 | 20210712 |
| EPI_ISL_19661703 | NSP3 | hCoV-19/New Zealand/24YA7899/2024 | K | 963 | Q | 205 | 20241213 |
| EPI_ISL_19666572 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17318395/2024 | K | 963 | E | 227 | 20241228 |
| EPI_ISL_11109704 | NSP3 | hCoV-19/India/DL-NCDC-650997/2021 | K | 963 | insGVQIPCTC | 1 | 20211127 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | K | 963 | del | 92 | 20231126 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | K | 963 | S | 11 | 20240307 |
| EPI_ISL_19802047 | NSP3 | hCoV-19/USA/IL-RIPHL_123964_G/2025 | K | 963 | N | 376 | 20250228 |
| EPI_ISL_13736273 | NSP3 | hCoV-19/Chile/RM-82171/2022 | K | 963 | Y | 7 | 20220701 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | K | 963 | F | 2 | 20221226 |
| EPI_ISL_19445627 | NSP3 | hCoV-19/USA/DE-CDC-LC1120741/2024 | K | 963 | T | 65 | 20240906 |
| EPI_ISL_17535019 | NSP3 | hCoV-19/USA/OH-CDC-QDX48853944/2023 | K | 963 | I | 17 | 20230406 |
| EPI_ISL_18226358 | NSP3 | hCoV-19/env/India/MH-FMR_K4-59b/2023 | K | 963 | stop | 9 | 20230403 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | K | 963 | H | 3 | 20220121 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | K | 963 | insMLVY | 1 | 20220119 |
| EPI_ISL_14366964 | NSP3 | hCoV-19/India/MH-NCCS-C263780/2022 | K | 963 | D | 7 | 20220104 |
| EPI_ISL_19749671 | NSP3 | hCoV-19/USA/CA-CDC-QDX31499009/2025 | K | 963 | R | 1140 | 20250204 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | G | 964 | del | 109 | 20231126 |
| EPI_ISL_19158883 | NSP3 | hCoV-19/Canada/SK-RRPL-711536/2024 | G | 964 | S | 72 | 20240428 |
| EPI_ISL_19071003 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6672/2024 | G | 964 | C | 25 | 20240321 |
| EPI_ISL_14366957 | NSP3 | hCoV-19/India/MH-NCCS-C263865/2022 | G | 964 | K | 1 | 20220104 |
| EPI_ISL_8619229 | NSP3 | hCoV-19/Germany/NI-IOV-60393359/2022 | G | 964 | N | 2 | 20220108 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | G | 964 | D | 2 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 964 | Y | 1 | 20210318 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | G | 964 | stop | 9 | 20210114 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | G | 964 | insFCDLKGKY | 1 | 20210106 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 964 | T | 14 | 20230101 |
| EPI_ISL_13736273 | NSP3 | hCoV-19/Chile/RM-82171/2022 | G | 964 | L | 7 | 20220701 |
| EPI_ISL_19423386 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08388/2024 | G | 964 | V | 33 | 20240823 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | G | 964 | A | 11 | 20240307 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | V | 965 | stop | 6 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 965 | T | 5 | 20221226 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | V | 965 | D | 2 | 20200729 |
| EPI_ISL_19334602 | NSP3 | hCoV-19/Egypt/CPHL-EGY24153/2024 | V | 965 | L | 16 | 20240623 |
| EPI_ISL_8803772 | NSP3 | hCoV-19/India/MH-NCCS-2749001804225/2021 | V | 965 | G | 1 | 20210812 |
| EPI_ISL_11109704 | NSP3 | hCoV-19/India/DL-NCDC-650997/2021 | V | 965 | K | 1 | 20211127 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | V | 965 | Y | 1 | 20210916 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | V | 965 | E | 2 | 20210806 |
| EPI_ISL_12584079 | NSP3 | hCoV-19/Turkey/HSGM-G8640/2022 | V | 965 | N | 2 | 20220407 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | V | 965 | insTFCY | 8 | 20211227 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | V | 965 | S | 5 | 20211222 |
| EPI_ISL_19807199 | NSP3 | hCoV-19/Canada/ON-KHS-202500740-v1/2025 | V | 965 | I | 1001 | 20250228 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | V | 965 | C | 4 | 20240307 |
| EPI_ISL_19691973 | NSP3 | hCoV-19/Canada/ON-PHL-202502315/2025 | V | 965 | F | 3841 | 20250119 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | V | 965 | del | 106 | 20231126 |
| EPI_ISL_19566774 | NSP3 | hCoV-19/Luxembourg/LNS5973020/2024 | V | 965 | A | 40 | 20241025 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 965 | M | 1 | 20220210 |
| EPI_ISL_19408774 | NSP3 | hCoV-19/Canada/BC-BCCDC-728750/2024 | Q | 966 | P | 39 | 20240815 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 966 | M | 1 | 20220210 |
| EPI_ISL_19702492 | NSP3 | hCoV-19/Canada/ON-PHL-202503048/2025 | Q | 966 | H | 592 | 20250125 |
| EPI_ISL_18895980 | NSP3 | hCoV-19/France/IDF-AphpSA-882311095010/2023 | Q | 966 | E | 12 | 20231127 |
| EPI_ISL_19393161 | NSP3 | hCoV-19/Italy/SIC-AOUP-UNIPA_109122/2024 | Q | 966 | K | 67 | 20240818 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | Q | 966 | V | 1 | 20220302 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Q | 966 | S | 7 | 20221226 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Q | 966 | N | 5 | 20221012 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Q | 966 | Y | 8 | 20240816 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | Q | 966 | insY | 1 | 20220321 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 966 | T | 9 | 20240307 |
| EPI_ISL_8564648 | NSP3 | hCoV-19/USA/CA-Curative-111856/2021 | Q | 966 | F | 1 | 20211215 |
| EPI_ISL_17625135 | NSP3 | hCoV-19/Denmark/DCGC-646358/2023 | Q | 966 | L | 12 | 20230413 |
| EPI_ISL_19500199 | NSP3 | hCoV-19/USA/NY-CDC-LC1124281/2024 | Q | 966 | R | 344 | 20241010 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | Q | 966 | insLYstop | 1 | 20200701 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Q | 966 | del | 67 | 20231126 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | Q | 966 | D | 10 | 20220923 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Q | 966 | stop | 13 | 20230101 |
| EPI_ISL_11887839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0814/2022 | I | 967 | G | 1 | 20220122 |
| EPI_ISL_12220889 | NSP3 | hCoV-19/Lithuania/S22C215/2022 | I | 967 | J | 6 | 20220308 |
| EPI_ISL_19780759 | NSP3 | hCoV-19/Spain/PV-HUB-50955612/2025 | I | 967 | V | 759 | 20250224 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 967 | C | 2 | 20220210 |
| EPI_ISL_19796004 | NSP3 | hCoV-19/Denmark/DCGC-691983/2025 | I | 967 | T | 4085 | 20250303 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | I | 967 | F | 10 | 20240307 |
| EPI_ISL_19624323 | NSP3 | hCoV-19/Slovenia/IMI-V1-13853/2024 | I | 967 | M | 298 | 20241201 |
| EPI_ISL_19690508 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y88DZ/2024 | I | 967 | L | 142 | 20241223 |
| EPI_ISL_6776733 | NSP3 | hCoV-19/France/IDF-HMN-21112120325/2021 | I | 967 | P | 1 | 20211112 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | I | 967 | del | 52 | 20231126 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 967 | E | 10 | 20230101 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 967 | R | 4 | 20250116 |
| EPI_ISL_14366968 | NSP3 | hCoV-19/India/MH-NCCS-C265077/2022 | I | 967 | D | 3 | 20220107 |
| EPI_ISL_19610947 | NSP3 | hCoV-19/Hungary/102316-UPL24-005076/2024 | I | 967 | K | 37 | 20241014 |
| EPI_ISL_15292705 | NSP3 | hCoV-19/India/MH-NCCS-2750000431279/2021 | I | 967 | A | 2 | 20211211 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | I | 967 | Y | 10 | 20240816 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | I | 967 | S | 1 | 20230217 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | I | 967 | insVNKP | 1 | 20220119 |
| EPI_ISL_3756621 | NSP3 | hCoV-19/USA/ID-IBL-744725/2021 | P | 968 | insstop | 1 | 20210802 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | P | 968 | R | 24 | 20230101 |
| EPI_ISL_17068893 | NSP3 | hCoV-19/Japan/TKYkbm87932/2023 | P | 968 | F | 7 | 20230207 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | P | 968 | W | 7 | 20220923 |
| EPI_ISL_16842761 | NSP3 | hCoV-19/USA/WV-WVU-WV135480/2022 | P | 968 | N | 5 | 20221114 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | P | 968 | V | 8 | 20221012 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | P | 968 | del | 68 | 20231126 |
| EPI_ISL_9276438 | NSP3 | hCoV-19/England/MILK-33ADE5A/2022 | P | 968 | A | 1 | 20220122 |
| EPI_ISL_16842756 | NSP3 | hCoV-19/USA/WV-WVU-WV135464/2022 | P | 968 | I | 8 | 20221109 |
| EPI_ISL_19825357 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-03D-MM00077U/2025 | P | 968 | L | 15958 | 20250403 |
| EPI_ISL_19772134 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10742/2025 | P | 968 | H | 382 | 20250207 |
| EPI_ISL_16842801 | NSP3 | hCoV-19/USA/WV-WVU-WV135539/2022 | P | 968 | Q | 2 | 20221025 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 968 | K | 1 | 20210318 |
| EPI_ISL_19528062 | NSP3 | hCoV-19/USA/NJ-CDC-LC1124677/2024 | P | 968 | T | 133 | 20241021 |
| EPI_ISL_18895980 | NSP3 | hCoV-19/France/IDF-AphpSA-882311095010/2023 | P | 968 | stop | 10 | 20231127 |
| EPI_ISL_11109704 | NSP3 | hCoV-19/India/DL-NCDC-650997/2021 | P | 968 | Y | 1 | 20211127 |
| EPI_ISL_19831534 | NSP3 | hCoV-19/Germany/MV-RKI-I-1148013/2025 | P | 968 | S | 5223 | 20250320 |
| EPI_ISL_456407 | NSP3 | hCoV-19/Iran/wuhan-5-2-1399-205/2020 | P | 968 | G | 1 | 20200415 |
| EPI_ISL_18034500 | NSP3 | hCoV-19/Guangdong/GDCDC_GZHG_1215/2023 | C | 969 | Y | 2 | 20230623 |
| EPI_ISL_7547071 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-100421-1035/2021 | C | 969 | V | 5 | 20211004 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | C | 969 | S | 56 | 20221031 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | C | 969 | G | 1 | 20240307 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | C | 969 | del | 68 | 20231126 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | C | 969 | T | 11 | 20230104 |
| EPI_ISL_16842761 | NSP3 | hCoV-19/USA/WV-WVU-WV135480/2022 | C | 969 | F | 19 | 20221114 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | C | 969 | stop | 9 | 20220923 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | C | 969 | I | 1 | 20210801 |
| EPI_ISL_11109704 | NSP3 | hCoV-19/India/DL-NCDC-650997/2021 | C | 969 | insGKRW | 1 | 20211127 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | C | 969 | insK | 4 | 20221012 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | C | 969 | L | 6 | 20221226 |
| EPI_ISL_11507471 | NSP3 | hCoV-19/Turkey/HSGM-G7769/2022 | C | 969 | R | 3 | 20220311 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | C | 969 | insstop | 1 | 20210825 |
| EPI_ISL_15292705 | NSP3 | hCoV-19/India/MH-NCCS-2750000431279/2021 | C | 969 | M | 1 | 20211211 |
| EPI_ISL_11355408 | NSP3 | hCoV-19/France/GES-ChNa-210059743501/2021 | C | 969 | insSD | 1 | 20210716 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | C | 969 | D | 4 | 20240816 |
| EPI_ISL_17334024 | NSP3 | hCoV-19/Italy/LOM-ASST-69326548/2023 | C | 969 | W | 2 | 20230320 |
| EPI_ISL_11950459 | NSP3 | hCoV-19/England/DHSC-CYYAW44/2022 | C | 969 | insH | 1 | 20220125 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | C | 969 | N | 1 | 20220119 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 969 | K | 1 | 20210318 |
| EPI_ISL_17317917 | NSP3 | hCoV-19/Russia/YAN-RII-MH128910S/2023 | T | 970 | P | 10 | 20230111 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | T | 970 | V | 5 | 20220728 |
| EPI_ISL_19563618 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-144102/2024 | T | 970 | I | 2 | 20241113 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | T | 970 | insDTLY | 1 | 20220721 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | T | 970 | R | 12 | 20230217 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 970 | C | 1 | 20221226 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | T | 970 | Q | 1 | 20231007 |
| EPI_ISL_19821845 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136199/2025 | T | 970 | M | 11951 | 20250325 |
| EPI_ISL_18643229 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17192572/2023 | T | 970 | S | 26 | 20231205 |
| EPI_ISL_19828191 | NSP3 | hCoV-19/Australia/QLD0x0154E6/2025 | T | 970 | A | 190 | 20250330 |
| EPI_ISL_11109704 | NSP3 | hCoV-19/India/DL-NCDC-650997/2021 | T | 970 | L | 1 | 20211127 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 970 | H | 1 | 20240307 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | T | 970 | del | 62 | 20231126 |
| EPI_ISL_17434184 | NSP3 | hCoV-19/Italy/LOM-ASST-69338853/2023 | T | 970 | stop | 2 | 20230405 |
| EPI_ISL_19773422 | NSP3 | hCoV-19/USA/CA-CDPH-500145397/2024 | T | 970 | K | 170 | 20241223 |
| EPI_ISL_16842735 | NSP3 | hCoV-19/USA/WV-WVU-WV135435/2022 | T | 970 | N | 2 | 20221105 |
| EPI_ISL_11951141 | NSP3 | hCoV-19/England/DHSC-CYYEI1K/2022 | T | 970 | Y | 5 | 20220210 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 971 | N | 1 | 20220210 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | C | 971 | M | 2 | 20231007 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | C | 971 | Q | 1 | 20230217 |
| EPI_ISL_11055026 | NSP3 | hCoV-19/India/HP-NCDC-5409226/2021 | C | 971 | I | 1 | 20210826 |
| EPI_ISL_13481060 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-101254/2022 | C | 971 | S | 4 | 20220615 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | C | 971 | del | 58 | 20231126 |
| EPI_ISL_11930976 | NSP3 | hCoV-19/England/DHSC-CYBMHIS/2022 | C | 971 | insstop | 3 | 20220219 |
| EPI_ISL_17427527 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2851/2023 | C | 971 | W | 8 | 20230401 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | C | 971 | D | 2 | 20210508 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | C | 971 | F | 7 | 20221226 |
| EPI_ISL_17334024 | NSP3 | hCoV-19/Italy/LOM-ASST-69326548/2023 | C | 971 | G | 2 | 20230320 |
| EPI_ISL_8813049 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110121-1229/2021 | C | 971 | Y | 3 | 20211101 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | C | 971 | T | 47 | 20221031 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | C | 971 | K | 2 | 20240307 |
| EPI_ISL_19469179 | NSP3 | hCoV-19/env/Ukraine/86329/2024 | C | 971 | R | 11 | 20240718 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | C | 971 | V | 12 | 20240816 |
| EPI_ISL_15157218 | NSP3 | hCoV-19/India/GA-NCCS-3055100277592/2021 | C | 971 | L | 8 | 20211210 |
| EPI_ISL_16808480 | NSP3 | hCoV-19/Japan/TKYmbc32388/2023 | G | 972 | D | 21 | 20230106 |
| EPI_ISL_14366968 | NSP3 | hCoV-19/India/MH-NCCS-C265077/2022 | G | 972 | W | 2 | 20220107 |
| EPI_ISL_19660546 | NSP3 | hCoV-19/USA/CA-CDPH-500144690/2024 | G | 972 | S | 213 | 20241118 |
| EPI_ISL_17427527 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2851/2023 | G | 972 | stop | 4 | 20230401 |
| EPI_ISL_1303900 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-29343/2021 | G | 972 | E | 1 | 20210127 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | G | 972 | insHFLMNNL | 6 | 20230401 |
| EPI_ISL_3010069 | NSP3 | hCoV-19/Spain/CT-HUJ23-17488/2021 | G | 972 | Q | 1 | 20210712 |
| EPI_ISL_3756621 | NSP3 | hCoV-19/USA/ID-IBL-744725/2021 | G | 972 | N | 3 | 20210802 |
| EPI_ISL_12320575 | NSP3 | hCoV-19/Turkey/HSGM-GS2204/2022 | G | 972 | V | 17 | 20220410 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | G | 972 | del | 55 | 20231126 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | G | 972 | A | 14 | 20230401 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | G | 972 | L | 5 | 20240307 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | G | 972 | F | 2 | 20240816 |
| EPI_ISL_15292719 | NSP3 | hCoV-19/India/MH-NCCS-2748700686840/2021 | G | 972 | T | 3 | 20211207 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | G | 972 | Y | 16 | 20230401 |
| EPI_ISL_17334024 | NSP3 | hCoV-19/Italy/LOM-ASST-69326548/2023 | G | 972 | C | 9 | 20230320 |
| EPI_ISL_19261266 | NSP3 | hCoV-19/England/CLIMB-CM7YKRMG/2024 | G | 972 | R | 7 | 20240701 |
| EPI_ISL_17790138 | NSP3 | hCoV-19/Switzerland/ZH-UZH-IMV-3ba6a3f0/2023 | K | 973 | I | 6 | 20230531 |
| EPI_ISL_19295928 | NSP3 | hCoV-19/Botswana/R240B37_BHP_ILI-24-173/2024 | K | 973 | N | 127 | 20240529 |
| EPI_ISL_19628788 | NSP3 | hCoV-19/USA/CA-CDPH-500141954/2024 | K | 973 | R | 314 | 20240819 |
| EPI_ISL_19620724 | NSP3 | hCoV-19/Canada/ON-PHL-202424449/2024 | K | 973 | E | 159 | 20241209 |
| EPI_ISL_8813038 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111021-1250/2021 | K | 973 | insNIstopY | 2 | 20211110 |
| EPI_ISL_1238006 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-28224/2021 | K | 973 | insHLQNIstopY | 1 | 20210208 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | K | 973 | S | 4 | 20220302 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | K | 973 | G | 3 | 20221226 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | K | 973 | D | 11 | 20230401 |
| EPI_ISL_8014124 | NSP3 | hCoV-19/Brazil/SP-IB_144362/2021 | K | 973 | M | 1 | 20211206 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 973 | V | 23 | 20230104 |
| EPI_ISL_17989371 | NSP3 | hCoV-19/Nepal/NPHL-S-2477/2023 | K | 973 | insQATKYLV | 1 | 20230409 |
| EPI_ISL_15292705 | NSP3 | hCoV-19/India/MH-NCCS-2750000431279/2021 | K | 973 | insLLstopHstop | 1 | 20211211 |
| EPI_ISL_18685877 | NSP3 | hCoV-19/Russia/SPE-RII-MH152577S/2023 | K | 973 | stop | 6 | 20231121 |
| EPI_ISL_18824855 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-137056/2024 | K | 973 | T | 57 | 20240113 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | K | 973 | del | 91 | 20231126 |
| EPI_ISL_11109704 | NSP3 | hCoV-19/India/DL-NCDC-650997/2021 | K | 973 | L | 3 | 20211127 |
| EPI_ISL_3010069 | NSP3 | hCoV-19/Spain/CT-HUJ23-17488/2021 | K | 973 | H | 1 | 20210712 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 973 | Q | 9 | 20221012 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | K | 973 | insL | 1 | 20200814 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | Q | 974 | V | 10 | 20230401 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 974 | Y | 3 | 20240307 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | Q | 974 | G | 1 | 20220302 |
| EPI_ISL_19265083 | NSP3 | hCoV-19/Spain/MC-HCUVA-14008637/2024 | Q | 974 | L | 60 | 20240617 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Q | 974 | del | 88 | 20231126 |
| EPI_ISL_19281984 | NSP3 | hCoV-19/USA/MN-MDH-41993/2024 | Q | 974 | K | 166 | 20240708 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Q | 974 | S | 2 | 20240816 |
| EPI_ISL_17711380 | NSP3 | hCoV-19/Thailand/NIC_BKK_3130/2023 | Q | 974 | E | 16 | 20230507 |
| EPI_ISL_14366954 | NSP3 | hCoV-19/India/MH-NCCS-C262392/2022 | Q | 974 | N | 5 | 20220103 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | Q | 974 | W | 5 | 20210806 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Q | 974 | D | 3 | 20221226 |
| EPI_ISL_15292691 | NSP3 | hCoV-19/India/KE-NCCS-560644357/2021 | Q | 974 | insLYVWstopT | 1 | 20211102 |
| EPI_ISL_19736018 | NSP3 | hCoV-19/Spain/CT-BST-910117615/2025 | Q | 974 | H | 316 | 20250130 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Q | 974 | stop | 16 | 20230104 |
| EPI_ISL_19373178 | NSP3 | hCoV-19/Netherlands/NH-RIVM-141113/2024 | Q | 974 | P | 33 | 20240807 |
| EPI_ISL_13481481 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-100594/2022 | Q | 974 | T | 15 | 20220612 |
| EPI_ISL_19774738 | NSP3 | hCoV-19/Slovenia/1002879/2024 | Q | 974 | R | 332 | 20241221 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | A | 975 | I | 1 | 20221226 |
| EPI_ISL_11062143 | NSP3 | hCoV-19/India/MP-NCDC-650923/2021 | A | 975 | insYCGKRWLCSLVR | 5 | 20211115 |
| EPI_ISL_17334024 | NSP3 | hCoV-19/Italy/LOM-ASST-69326548/2023 | A | 975 | D | 4 | 20230320 |
| EPI_ISL_11939764 | NSP3 | hCoV-19/England/DHSC-CYDPQTG/2022 | A | 975 | P | 4 | 20220128 |
| EPI_ISL_7547071 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-100421-1035/2021 | A | 975 | L | 9 | 20211004 |
| EPI_ISL_15292699 | NSP3 | hCoV-19/India/MH-NCCS-2750000428789/2021 | A | 975 | insQNIstopYNR | 1 | 20211203 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | A | 975 | F | 1 | 20210806 |
| EPI_ISL_11109704 | NSP3 | hCoV-19/India/DL-NCDC-650997/2021 | A | 975 | R | 6 | 20211127 |
| EPI_ISL_13232063 | NSP3 | hCoV-19/USA/CA-MIRADX-61210750712236/2022 | A | 975 | insVHSTS | 2 | 20220216 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | A | 975 | insWstop | 1 | 20210508 |
| EPI_ISL_18777641 | NSP3 | hCoV-19/Spain/CL-COV45434/2023 | A | 975 | T | 18 | 20231217 |
| EPI_ISL_11052482 | NSP3 | hCoV-19/India/LA-NCDC-550940/2021 | A | 975 | insYCG | 1 | 20210830 |
| EPI_ISL_11055026 | NSP3 | hCoV-19/India/HP-NCDC-5409226/2021 | A | 975 | C | 1 | 20210826 |
| EPI_ISL_12146085 | NSP3 | hCoV-19/Turkey/HSGM-GS1800/2022 | A | 975 | N | 2 | 20220401 |
| EPI_ISL_9017647 | NSP3 | hCoV-19/India/AS-INSACOG-1861803611299/2021 | A | 975 | insPC | 1 | 20211211 |
| EPI_ISL_13736273 | NSP3 | hCoV-19/Chile/RM-82171/2022 | A | 975 | E | 1 | 20220701 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | A | 975 | del | 69 | 20231126 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | A | 975 | Q | 7 | 20240307 |
| EPI_ISL_19430463 | NSP3 | hCoV-19/Australia/QLD0x014A75/2024 | A | 975 | V | 402 | 20240906 |
| EPI_ISL_14366954 | NSP3 | hCoV-19/India/MH-NCCS-C262392/2022 | A | 975 | K | 6 | 20220103 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | A | 975 | Y | 4 | 20220121 |
| EPI_ISL_17730205 | NSP3 | hCoV-19/India/CT-ILS-GS20644/2023 | A | 975 | G | 7 | 20230426 |
| EPI_ISL_19803642 | NSP3 | hCoV-19/USA/WI-WSLH-2500851/2025 | A | 975 | S | 171 | 20250217 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | A | 975 | stop | 5 | 20210806 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 976 | L | 3 | 20211006 |
| EPI_ISL_15157227 | NSP3 | hCoV-19/India/GA-NCCS-602590432/2021 | T | 976 | Q | 12 | 20211214 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 976 | C | 1 | 20221226 |
| EPI_ISL_19662752 | NSP3 | hCoV-19/Singapore/R62MQ23/2024 | T | 976 | K | 194 | 20241112 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | T | 976 | N | 4 | 20230217 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | T | 976 | Y | 15 | 20220923 |
| EPI_ISL_18256311 | NSP3 | hCoV-19/USA/TX-HMH-M-132294/2023 | T | 976 | S | 38 | 20230824 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 976 | V | 7 | 20240816 |
| EPI_ISL_19785334 | NSP3 | hCoV-19/Japan/FR012-0069/2025 | T | 976 | I | 5171 | 20250311 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | T | 976 | insG | 2 | 20220121 |
| EPI_ISL_18247091 | NSP3 | hCoV-19/USA/MS-MSPHL-0477/2023 | T | 976 | H | 2 | 20230828 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | T | 976 | F | 25 | 20230401 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | T | 976 | del | 63 | 20231126 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 976 | stop | 9 | 20230104 |
| EPI_ISL_11377488 | NSP3 | hCoV-19/France/GES-HMN-22032081280/2022 | T | 976 | P | 17 | 20220228 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 976 | A | 56 | 20240307 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | T | 976 | M | 1 | 20221230 |
| EPI_ISL_9829273 | NSP3 | hCoV-19/Nigeria/NCDC-NR1212/2021 | T | 976 | R | 19 | 20211217 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | K | 977 | Y | 1 | 20221226 |
| EPI_ISL_19826623 | NSP3 | hCoV-19/USA/NY-PRL-250408_83B01/2025 | K | 977 | Q | 86427 | 20250330 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | K | 977 | F | 1 | 20220119 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | K | 977 | P | 2 | 20240307 |
| EPI_ISL_18990023 | NSP3 | hCoV-19/Spain/AN-PMC-39796/2024 | K | 977 | I | 23 | 20240218 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 977 | L | 2 | 20240816 |
| EPI_ISL_19540707 | NSP3 | hCoV-19/Mexico/PUE_IBT_IMSS_13075/2024 | K | 977 | T | 452 | 20240329 |
| EPI_ISL_17989371 | NSP3 | hCoV-19/Nepal/NPHL-S-2477/2023 | K | 977 | H | 6 | 20230409 |
| EPI_ISL_1303900 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-29343/2021 | K | 977 | insIstop | 1 | 20210127 |
| EPI_ISL_15292715 | NSP3 | hCoV-19/India/MH-NCCS-2748700680776/2021 | K | 977 | V | 3 | 20211203 |
| EPI_ISL_19385086 | NSP3 | hCoV-19/Hubei/HCDC-XG6621/2024 | K | 977 | N | 111 | 20240807 |
| EPI_ISL_16619885 | NSP3 | hCoV-19/Italy/LOM-ASST-69269508/2023 | K | 977 | stop | 2 | 20230117 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | K | 977 | C | 1 | 20210428 |
| EPI_ISL_16595584 | NSP3 | hCoV-19/Germany/SH-RKI-I-1087773/2022 | K | 977 | insC | 1 | 20221227 |
| EPI_ISL_19513723 | NSP3 | hCoV-19/USA/PA-CDC-LC1124352/2024 | K | 977 | E | 203 | 20241015 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 977 | A | 10 | 20230104 |
| EPI_ISL_11055026 | NSP3 | hCoV-19/India/HP-NCDC-5409226/2021 | K | 977 | D | 2 | 20210826 |
| EPI_ISL_17427527 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2851/2023 | K | 977 | S | 13 | 20230401 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | K | 977 | del | 57 | 20231126 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | K | 977 | G | 1 | 20210106 |
| EPI_ISL_19475763 | NSP3 | hCoV-19/Taiwan/CDC-F94327/2024 | K | 977 | R | 315 | 20240916 |
| EPI_ISL_19633136 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6898/2024 | Y | 978 | N | 7 | 20240805 |
| EPI_ISL_17657578 | NSP3 | hCoV-19/France/ARA-HCL-723000670801/2023 | Y | 978 | F | 7 | 20230424 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | Y | 978 | M | 2 | 20220302 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 978 | P | 1 | 20240307 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Y | 978 | W | 12 | 20230104 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 978 | H | 16 | 20240816 |
| EPI_ISL_18863884 | NSP3 | hCoV-19/Italy/LOM-UniMI200/2023 | Y | 978 | C | 10 | 20231127 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | Y | 978 | insstopYNRSHL | 1 | 20210803 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | Y | 978 | R | 1 | 20210806 |
| EPI_ISL_17334024 | NSP3 | hCoV-19/Italy/LOM-ASST-69326548/2023 | Y | 978 | E | 2 | 20230320 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | Y | 978 | insHSTTGVTF | 1 | 20211222 |
| EPI_ISL_11055026 | NSP3 | hCoV-19/India/HP-NCDC-5409226/2021 | Y | 978 | T | 2 | 20210826 |
| EPI_ISL_17488394 | NSP3 | hCoV-19/Zhejiang/ZJCDC-116/2023 | Y | 978 | stop | 3 | 20230202 |
| EPI_ISL_9073604 | NSP3 | hCoV-19/USA/MO-CDC-ASC210586705/2022 | Y | 978 | I | 12 | 20220104 |
| EPI_ISL_17989371 | NSP3 | hCoV-19/Nepal/NPHL-S-2477/2023 | Y | 978 | L | 6 | 20230409 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Y | 978 | del | 63 | 20231126 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | Y | 978 | S | 1 | 20210812 |
| EPI_ISL_15657675 | NSP3 | hCoV-19/Canada/BC-BCCDC-520198/2022 | Y | 978 | D | 3 | 20220908 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 978 | V | 1 | 20220210 |
| EPI_ISL_8813049 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110121-1229/2021 | Y | 978 | K | 2 | 20211101 |
| EPI_ISL_8813049 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110121-1229/2021 | L | 979 | insQNIstop | 2 | 20211101 |
| EPI_ISL_7547073 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100721-1038/2021 | L | 979 | C | 1 | 20211007 |
| EPI_ISL_16738487 | NSP3 | hCoV-19/Israel/CVL-9008665/2022 | L | 979 | R | 4 | 20221213 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | L | 979 | A | 1 | 20240307 |
| EPI_ISL_15621515 | NSP3 | hCoV-19/Peru/LOR-INS-30326/2022 | L | 979 | P | 7 | 20220713 |
| EPI_ISL_9366204 | NSP3 | hCoV-19/Germany/BY-LGL-IMS-10272-CVDP-e8f08ce5-cfb9-4cb9-925a-a4fafc122f7a/2022 | L | 979 | J | 5 | 20220112 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 979 | E | 1 | 20210318 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | L | 979 | T | 4 | 20230217 |
| EPI_ISL_3010069 | NSP3 | hCoV-19/Spain/CT-HUJ23-17488/2021 | L | 979 | N | 1 | 20210712 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 979 | Y | 10 | 20230104 |
| EPI_ISL_17427527 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2851/2023 | L | 979 | K | 11 | 20230401 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | L | 979 | insWNKLQN | 1 | 20210805 |
| EPI_ISL_19508878 | NSP3 | hCoV-19/Spain/AS-HUCA-232476317/2024 | L | 979 | V | 16 | 20241014 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | L | 979 | S | 15 | 20230401 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | L | 979 | F | 2 | 20230217 |
| EPI_ISL_19640265 | NSP3 | hCoV-19/Shanxi/SZCDC-132/2024 | L | 979 | I | 307 | 20241211 |
| EPI_ISL_15157227 | NSP3 | hCoV-19/India/GA-NCCS-602590432/2021 | L | 979 | stop | 5 | 20211214 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | L | 979 | del | 61 | 20231126 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | L | 979 | M | 1 | 20230209 |
| EPI_ISL_12320575 | NSP3 | hCoV-19/Turkey/HSGM-GS2204/2022 | L | 979 | Q | 3 | 20220410 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | V | 980 | stop | 3 | 20220119 |
| EPI_ISL_13736273 | NSP3 | hCoV-19/Chile/RM-82171/2022 | V | 980 | M | 3 | 20220701 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | V | 980 | K | 9 | 20221012 |
| EPI_ISL_17334024 | NSP3 | hCoV-19/Italy/LOM-ASST-69326548/2023 | V | 980 | G | 3 | 20230320 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | V | 980 | R | 1 | 20230209 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | V | 980 | insY | 1 | 20210801 |
| EPI_ISL_18118611 | NSP3 | hCoV-19/France/ARA-HCL723000937201/2023 | V | 980 | E | 18 | 20230807 |
| EPI_ISL_15157227 | NSP3 | hCoV-19/India/GA-NCCS-602590432/2021 | V | 980 | Y | 9 | 20211214 |
| EPI_ISL_19521272 | NSP3 | hCoV-19/Norway/7220/2024 | V | 980 | A | 379 | 20241001 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | V | 980 | T | 4 | 20240816 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | V | 980 | del | 69 | 20231126 |
| EPI_ISL_19651717 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55943/2024 | V | 980 | L | 748 | 20241219 |
| EPI_ISL_19707758 | NSP3 | hCoV-19/Japan/FR011-0952/2024 | V | 980 | I | 444 | 20241227 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | V | 980 | N | 1 | 20200701 |
| EPI_ISL_10826593 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-87298/2022 | V | 980 | insSR | 1 | 20220129 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | V | 980 | S | 10 | 20240307 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | V | 980 | F | 1 | 20221230 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | Q | 981 | insVVNKLQNIstopY | 4 | 20230401 |
| EPI_ISL_19350426 | NSP3 | hCoV-19/France/OCC-CHU-TLS-6005000990/2024 | Q | 981 | K | 69 | 20240804 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | Q | 981 | E | 3 | 20230217 |
| EPI_ISL_17989371 | NSP3 | hCoV-19/Nepal/NPHL-S-2477/2023 | Q | 981 | stop | 21 | 20230409 |
| EPI_ISL_15157227 | NSP3 | hCoV-19/India/GA-NCCS-602590432/2021 | Q | 981 | N | 8 | 20211214 |
| EPI_ISL_19435157 | NSP3 | hCoV-19/Canada/QC-L00785122001/2024 | Q | 981 | R | 838 | 20240909 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 981 | M | 3 | 20240307 |
| EPI_ISL_19793890 | NSP3 | hCoV-19/Brazil/MG-LACENMG-312273514/2025 | Q | 981 | L | 444 | 20250120 |
| EPI_ISL_17427527 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2851/2023 | Q | 981 | S | 14 | 20230401 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | Q | 981 | C | 2 | 20210428 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Q | 981 | P | 1 | 20211006 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | Q | 981 | F | 1 | 20200814 |
| EPI_ISL_11755374 | NSP3 | hCoV-19/Thailand/NIC_SSK_SEQ12257/2022 | Q | 981 | V | 4 | 20220306 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Q | 981 | del | 63 | 20231126 |
| EPI_ISL_7547073 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100721-1038/2021 | Q | 981 | D | 1 | 20211007 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | Q | 981 | Y | 11 | 20220119 |
| EPI_ISL_9519773 | NSP3 | hCoV-19/France/IDF-HMN-22012210662/2022 | Q | 981 | T | 12 | 20220110 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Q | 981 | G | 5 | 20221012 |
| EPI_ISL_19030097 | NSP3 | hCoV-19/Palestine/JN-653/2024 | Q | 981 | H | 23 | 20240225 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | Q | 981 | insVVNKLQNIYN | 1 | 20210909 |
| EPI_ISL_12146085 | NSP3 | hCoV-19/Turkey/HSGM-GS1800/2022 | Q | 982 | E | 1 | 20220401 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | Q | 982 | Y | 1 | 20210805 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | Q | 982 | N | 8 | 20230401 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 982 | M | 10 | 20240307 |
| EPI_ISL_17427527 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2851/2023 | Q | 982 | S | 14 | 20230401 |
| EPI_ISL_18863860 | NSP3 | hCoV-19/Italy/LOM-UniMI174/2023 | Q | 982 | V | 20 | 20231211 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Q | 982 | del | 89 | 20231126 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | Q | 982 | L | 1 | 20230209 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | Q | 982 | C | 7 | 20211222 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | Q | 982 | T | 16 | 20230401 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | Q | 982 | F | 2 | 20210817 |
| EPI_ISL_18643229 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17192572/2023 | Q | 982 | K | 11 | 20231205 |
| EPI_ISL_16829089 | NSP3 | hCoV-19/Italy/LOM-ASST-02024642/2023 | Q | 982 | P | 3 | 20230202 |
| EPI_ISL_12583993 | NSP3 | hCoV-19/Turkey/HSGM-G8605/2022 | Q | 982 | W | 3 | 20220407 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Q | 982 | D | 1 | 20240816 |
| EPI_ISL_17096048 | NSP3 | hCoV-19/Eswatini/N52500/2022 | Q | 982 | R | 23 | 20221128 |
| EPI_ISL_18968344 | NSP3 | hCoV-19/Israel/ICH-741201181/2024 | Q | 982 | stop | 13 | 20240225 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | Q | 982 | insLQNIstopYNRSHLLLstopC | 1 | 20210806 |
| EPI_ISL_15350854 | NSP3 | hCoV-19/India/TN-INSACOG-CSIR-NEERI2777/2022 | Q | 982 | H | 5 | 20220911 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | E | 983 | del | 87 | 20231126 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | E | 983 | P | 1 | 20230217 |
| EPI_ISL_19462691 | NSP3 | hCoV-19/env/Germany/BY-LGL-6354640/2024 | E | 983 | G | 148 | 20240911 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | E | 983 | C | 3 | 20220121 |
| EPI_ISL_18516993 | NSP3 | hCoV-19/Canada/BC-BCCDC-663786/2023 | E | 983 | Z | 5 | 20231017 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | E | 983 | L | 8 | 20240816 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | E | 983 | stop | 13 | 20230401 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | E | 983 | H | 2 | 20220119 |
| EPI_ISL_15078510 | NSP3 | hCoV-19/Luxembourg/LNS1516598/2022 | E | 983 | N | 5 | 20220905 |
| EPI_ISL_19822830 | NSP3 | hCoV-19/Denmark/DCGC-692100/2025 | E | 983 | D | 1254 | 20250324 |
| EPI_ISL_17427536 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2878/2023 | E | 983 | R | 9 | 20230401 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | E | 983 | insTG | 3 | 20210114 |
| EPI_ISL_17521478 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2057/2023 | E | 983 | S | 15 | 20230330 |
| EPI_ISL_19669221 | NSP3 | hCoV-19/Canada/SK-RRPL-758404/2024 | E | 983 | A | 66 | 20241216 |
| EPI_ISL_11954502 | NSP3 | hCoV-19/England/DHSC-CYYQKRG/2022 | E | 983 | F | 1 | 20220112 |
| EPI_ISL_17427527 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2851/2023 | E | 983 | T | 16 | 20230401 |
| EPI_ISL_19759815 | NSP3 | hCoV-19/Japan/FR008-0004/2025 | E | 983 | K | 443 | 20250115 |
| EPI_ISL_2224213 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-42336/2020 | E | 983 | insTA | 1 | 20200707 |
| EPI_ISL_11106093 | NSP3 | hCoV-19/Indonesia/SG-NIHRD-WGS-22-03378/2022 | E | 983 | Y | 1 | 20220202 |
| EPI_ISL_8619216 | NSP3 | hCoV-19/Germany/NI-IOV-60393360/2022 | E | 983 | M | 2 | 20220108 |
| EPI_ISL_15610848 | NSP3 | hCoV-19/USA/WA-CDC-UW22101898438/2022 | E | 983 | Q | 22 | 20221018 |
| EPI_ISL_19797815 | NSP3 | hCoV-19/Brazil/MG-LACENMG-312305756/2025 | E | 983 | V | 43 | 20250307 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | S | 984 | del | 47 | 20240816 |
| EPI_ISL_12416559 | NSP3 | hCoV-19/Finland/VI-1482/2022 | S | 984 | L | 13 | 20220127 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | S | 984 | G | 4 | 20220121 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | S | 984 | P | 10 | 20230217 |
| EPI_ISL_1415154 | NSP3 | hCoV-19/India/MH-NCCS-77867/2020 | S | 984 | insPFVMMSA | 1 | 20200917 |
| EPI_ISL_11941004 | NSP3 | hCoV-19/England/DHSC-CYDTX8T/2022 | S | 984 | stop | 2 | 20220116 |
| EPI_ISL_15292733 | NSP3 | hCoV-19/India/GA-NCCS-3055200218757/2021 | S | 984 | N | 7 | 20211211 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | S | 984 | R | 2 | 20210805 |
| EPI_ISL_11106093 | NSP3 | hCoV-19/Indonesia/SG-NIHRD-WGS-22-03378/2022 | S | 984 | E | 1 | 20220202 |
| EPI_ISL_17521478 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2057/2023 | S | 984 | H | 23 | 20230330 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | S | 984 | V | 50 | 20230209 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 984 | Y | 2 | 20220210 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | S | 984 | F | 1 | 20240307 |
| EPI_ISL_17427527 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2851/2023 | S | 984 | insGV | 7 | 20230401 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | S | 984 | K | 1 | 20200701 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | S | 984 | C | 1 | 20200715 |
| EPI_ISL_18863860 | NSP3 | hCoV-19/Italy/LOM-UniMI174/2023 | S | 984 | T | 22 | 20231211 |
| EPI_ISL_15293851 | NSP3 | hCoV-19/India/MH-NCCS-319934777/2021 | S | 984 | insGA | 1 | 20211226 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | S | 984 | I | 3 | 20230217 |
| EPI_ISL_19690643 | NSP3 | hCoV-19/USA/NY-PRL-250122_81C10/2025 | S | 984 | A | 37 | 20250106 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | P | 985 | D | 3 | 20230217 |
| EPI_ISL_17334024 | NSP3 | hCoV-19/Italy/LOM-ASST-69326548/2023 | P | 985 | E | 1 | 20230320 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 985 | del | 50 | 20240816 |
| EPI_ISL_19795785 | NSP3 | hCoV-19/USA/MA-MASPHL-13760/2025 | P | 985 | L | 2355 | 20250220 |
| EPI_ISL_19773762 | NSP3 | hCoV-19/Hong Kong/HKDH-VB25072638/2025 | P | 985 | H | 385 | 20250225 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | P | 985 | W | 13 | 20230401 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | P | 985 | G | 3 | 20210730 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | P | 985 | Q | 1 | 20201214 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | P | 985 | V | 1 | 20210106 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 985 | Y | 2 | 20220210 |
| EPI_ISL_6899160 | NSP3 | hCoV-19/USA/IA-SHL-1939215/2021 | P | 985 | A | 8 | 20211117 |
| EPI_ISL_19819877 | NSP3 | hCoV-19/Canada/ON-HRL-20251019161731-v1/2025 | P | 985 | S | 29535 | 20250305 |
| EPI_ISL_18013269 | NSP3 | hCoV-19/England/BRBR-32B2A7CB/2023 | P | 985 | R | 4 | 20230627 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 985 | M | 1 | 20211006 |
| EPI_ISL_19394928 | NSP3 | hCoV-19/USA/IL-CDC-LC1118850/2024 | P | 985 | T | 354 | 20240828 |
| EPI_ISL_9173173 | NSP3 | hCoV-19/England/MILK-337C698/2022 | P | 985 | F | 1 | 20220120 |
| EPI_ISL_18673841 | NSP3 | hCoV-19/Bulgaria/23BG-NC_023896_R44/2023 | P | 985 | K | 8 | 20231120 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | F | 986 | D | 1 | 20200715 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | F | 986 | M | 1 | 20211006 |
| EPI_ISL_17521473 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2048/2022 | F | 986 | insV | 1 | 20221229 |
| EPI_ISL_5007138 | NSP3 | hCoV-19/South Korea/KDCA12481/2021 | F | 986 | W | 1 | 20210818 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | F | 986 | K | 1 | 20221226 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | F | 986 | del | 41 | 20231126 |
| EPI_ISL_17334024 | NSP3 | hCoV-19/Italy/LOM-ASST-69326548/2023 | F | 986 | V | 11 | 20230320 |
| EPI_ISL_17592071 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3056/2023 | F | 986 | C | 8 | 20230408 |
| EPI_ISL_1415154 | NSP3 | hCoV-19/India/MH-NCCS-77867/2020 | F | 986 | P | 1 | 20200917 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | F | 986 | Y | 25 | 20230401 |
| EPI_ISL_19342907 | NSP3 | hCoV-19/South Africa/1073389/2024 | F | 986 | L | 114 | 20240726 |
| EPI_ISL_18863860 | NSP3 | hCoV-19/Italy/LOM-UniMI174/2023 | F | 986 | stop | 6 | 20231211 |
| EPI_ISL_17999631 | NSP3 | hCoV-19/Australia/WA14289/2023 | F | 986 | I | 2 | 20230627 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 986 | R | 1 | 20201214 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | F | 986 | S | 6 | 20240307 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | F | 986 | A | 1 | 20230209 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | F | 986 | H | 1 | 20210805 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | V | 987 | E | 1 | 20240307 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | V | 987 | L | 100 | 20240816 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | V | 987 | del | 16 | 20231126 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | V | 987 | C | 48 | 20230401 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | V | 987 | K | 12 | 20220121 |
| EPI_ISL_18643229 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17192572/2023 | V | 987 | A | 72 | 20231205 |
| EPI_ISL_19795527 | NSP3 | hCoV-19/Canada/ON-PHL-202504429/2025 | V | 987 | I | 588 | 20250224 |
| EPI_ISL_18228384 | NSP3 | hCoV-19/Finland/THL-06798/2023 | V | 987 | F | 25 | 20230825 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 987 | S | 1 | 20220210 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | V | 987 | insstopCQHH | 7 | 20221226 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | V | 987 | T | 5 | 20230209 |
| EPI_ISL_17592071 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3056/2023 | V | 987 | Y | 10 | 20230408 |
| EPI_ISL_11023716 | NSP3 | hCoV-19/Turkey/HSGM-G2279/2022 | V | 987 | G | 1 | 20220217 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | M | 988 | F | 4 | 20211006 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | M | 988 | insstop | 3 | 20210812 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | M | 988 | W | 1 | 20230101 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | M | 988 | S | 12 | 20211222 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | M | 988 | del | 25 | 20231126 |
| EPI_ISL_16892886 | NSP3 | hCoV-19/env/USA/CA-SEARCH-219356/2022 | M | 988 | R | 2 | 20221206 |
| EPI_ISL_19713849 | NSP3 | hCoV-19/Russia/SPE-RII-MH224986S/2025 | M | 988 | I | 565 | 20250124 |
| EPI_ISL_17592071 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3056/2023 | M | 988 | D | 11 | 20230408 |
| EPI_ISL_19742226 | NSP3 | hCoV-19/France/BFC-RELAB-IPP02243/2025 | M | 988 | V | 624 | 20250131 |
| EPI_ISL_3915171 | NSP3 | hCoV-19/Italy/SIC-AOUP-UNIPA-87679/2021 | M | 988 | G | 2 | 20210824 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | M | 988 | insD | 1 | 20210813 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | M | 988 | insCQHHLLS | 1 | 20211018 |
| EPI_ISL_16085513 | NSP3 | hCoV-19/France/ARA-HMN-22112290404/2022 | M | 988 | T | 13 | 20221107 |
| EPI_ISL_9261400 | NSP3 | hCoV-19/USA/CA-Curative-131068/2021 | M | 988 | stop | 6 | 20211218 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | M | 988 | insS | 1 | 20210726 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | M | 988 | Q | 1 | 20240307 |
| EPI_ISL_17222552 | NSP3 | hCoV-19/Finland/THL-03168/2023 | M | 988 | L | 293 | 20230224 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 988 | A | 1 | 20220210 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | M | 988 | H | 3 | 20221226 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | M | 988 | Y | 57 | 20230401 |
| EPI_ISL_18352009 | NSP3 | hCoV-19/USA/MS-MSPHL-0766/2023 | M | 988 | K | 3 | 20230921 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | M | 988 | P | 1 | 20240816 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | M | 988 | insCYD | 1 | 20200803 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | M | 989 | G | 1 | 20221226 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | M | 989 | C | 9 | 20210812 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | M | 989 | N | 18 | 20230401 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | M | 989 | Q | 2 | 20240307 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | M | 989 | F | 3 | 20240816 |
| EPI_ISL_15574079 | NSP3 | hCoV-19/Luxembourg/LNS2924934/2022 | M | 989 | T | 6 | 20221012 |
| EPI_ISL_9637918 | NSP3 | hCoV-19/USA/PA-VSP10535/2021 | M | 989 | E | 1 | 20211212 |
| EPI_ISL_11023712 | NSP3 | hCoV-19/Turkey/HSGM-G2091/2022 | M | 989 | K | 2 | 20220217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | M | 989 | A | 1 | 20201214 |
| EPI_ISL_12934369 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1589/2022 | M | 989 | D | 43 | 20220119 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | M | 989 | stop | 3 | 20230101 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | M | 989 | R | 3 | 20220302 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | M | 989 | insstopC | 1 | 20210805 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | M | 989 | Y | 4 | 20221012 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | M | 989 | P | 2 | 20230217 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | M | 989 | del | 29 | 20231126 |
| EPI_ISL_18352009 | NSP3 | hCoV-19/USA/MS-MSPHL-0766/2023 | M | 989 | I | 14 | 20230921 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | M | 989 | S | 9 | 20230209 |
| EPI_ISL_19496328 | NSP3 | hCoV-19/USA/MN-MDH-43490/2024 | M | 989 | L | 194 | 20240930 |
| EPI_ISL_17592071 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3056/2023 | M | 989 | V | 27 | 20230408 |
| EPI_ISL_17429255 | NSP3 | hCoV-19/USA/IL-CDC-QDX48316635/2023 | S | 990 | T | 6 | 20230323 |
| EPI_ISL_12582717 | NSP3 | hCoV-19/Turkey/HSGM-G8459/2022 | S | 990 | P | 5 | 20220401 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | S | 990 | C | 10 | 20230401 |
| EPI_ISL_3568588 | NSP3 | hCoV-19/France/ARA-CHUGA-1063979941/2021 | S | 990 | E | 1 | 20210620 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | S | 990 | V | 45 | 20240307 |
| EPI_ISL_18110505 | NSP3 | hCoV-19/USA/MS-MSPHL-0323/2023 | S | 990 | stop | 7 | 20230731 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | S | 990 | K | 18 | 20230401 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | S | 990 | M | 4 | 20221012 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | S | 990 | F | 2 | 20240816 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | S | 990 | del | 29 | 20231126 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | S | 990 | Q | 6 | 20210812 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | S | 990 | insstopstopVHWstop | 5 | 20230401 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | S | 990 | N | 15 | 20230217 |
| EPI_ISL_19344935 | NSP3 | hCoV-19/Japan/FR027-0109/2024 | S | 990 | A | 7 | 20240805 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | S | 990 | L | 14 | 20240111 |
| EPI_ISL_17057330 | NSP3 | hCoV-19/USA/TX-UTEP-B002474062/2022 | A | 991 | P | 4 | 20220301 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 991 | I | 1 | 20220210 |
| EPI_ISL_19276306 | NSP3 | hCoV-19/Spain/EX-BA_18646869/2024 | A | 991 | E | 48 | 20240705 |
| EPI_ISL_3915171 | NSP3 | hCoV-19/Italy/SIC-AOUP-UNIPA-87679/2021 | A | 991 | H | 5 | 20210824 |
| EPI_ISL_19788491 | NSP3 | hCoV-19/France/ARA-HCL025041167001/2025 | A | 991 | T | 3219 | 20250310 |
| EPI_ISL_19580284 | NSP3 | hCoV-19/Japan/NCGM-04675/2022 | A | 991 | insLNHTKKWKY | 2 | 20220721 |
| EPI_ISL_9129363 | NSP3 | hCoV-19/England/ALDP-333A520/2022 | A | 991 | insP | 1 | 20220118 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | A | 991 | N | 1 | 20210805 |
| EPI_ISL_11052482 | NSP3 | hCoV-19/India/LA-NCDC-550940/2021 | A | 991 | insXXXXX | 1 | 20210830 |
| EPI_ISL_4530197 | NSP3 | hCoV-19/England/PHEC-3G074G19/2021 | A | 991 | C | 1 | 20210919 |
| EPI_ISL_15162802 | NSP3 | hCoV-19/India/MH-NCCS-588285776/2021 | A | 991 | stop | 1 | 20211130 |
| EPI_ISL_6022911 | NSP3 | hCoV-19/England/PHEC-3N0BDNB0/2021 | A | 991 | R | 1 | 20211028 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | A | 991 | S | 217 | 20240816 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | A | 991 | L | 37 | 20240307 |
| EPI_ISL_16514378 | NSP3 | hCoV-19/Austria/AGES-1167400/2022 | A | 991 | G | 16 | 20221226 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | A | 991 | Q | 4 | 20230217 |
| EPI_ISL_19724566 | NSP3 | hCoV-19/Italy/LOM_Unimi-1329-25/2025 | A | 991 | V | 2287 | 20250109 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | A | 991 | del | 41 | 20231126 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | A | 991 | M | 7 | 20221226 |
| EPI_ISL_19822315 | NSP3 | hCoV-19/New Zealand/25YA0757/2025 | P | 992 | L | 3196 | 20250321 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | P | 992 | del | 47 | 20231126 |
| EPI_ISL_6022911 | NSP3 | hCoV-19/England/PHEC-3N0BDNB0/2021 | P | 992 | C | 1 | 20211028 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 992 | N | 8 | 20240816 |
| EPI_ISL_19761736 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U245-1/2025 | P | 992 | S | 2360 | 20250203 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | P | 992 | K | 3 | 20220121 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | P | 992 | stop | 2 | 20220119 |
| EPI_ISL_3915171 | NSP3 | hCoV-19/Italy/SIC-AOUP-UNIPA-87679/2021 | P | 992 | V | 2 | 20210824 |
| EPI_ISL_19819788 | NSP3 | hCoV-19/Wales/CLIMB-CM7Y8M5W/2025 | P | 992 | T | 395 | 20250323 |
| EPI_ISL_12934387 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012122-1607/2022 | P | 992 | H | 6 | 20220121 |
| EPI_ISL_18798672 | NSP3 | hCoV-19/Australia/NSW-ICPMR-52434/2023 | P | 992 | A | 34 | 20231218 |
| EPI_ISL_19310865 | NSP3 | hCoV-19/USA/NY-NPHL-240729_84A02/2024 | P | 992 | Q | 95 | 20240725 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | P | 992 | I | 1 | 20200814 |
| EPI_ISL_16118560 | NSP3 | hCoV-19/USA/CA-CDPH-1002007368/2021 | P | 992 | R | 1 | 20210416 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | P | 992 | Y | 3 | 20240307 |
| EPI_ISL_12582717 | NSP3 | hCoV-19/Turkey/HSGM-G8459/2022 | P | 993 | T | 52 | 20220401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 993 | M | 11 | 20220210 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | P | 993 | K | 4 | 20240307 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | P | 993 | insDNYI | 1 | 20220302 |
| EPI_ISL_15292733 | NSP3 | hCoV-19/India/GA-NCCS-3055200218757/2021 | P | 993 | G | 7 | 20211211 |
| EPI_ISL_12934152 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-123121-1483/2021 | P | 993 | stop | 2 | 20211231 |
| EPI_ISL_19218974 | NSP3 | hCoV-19/Spain/CL-46954/2024 | P | 993 | S | 182 | 20240517 |
| EPI_ISL_13576105 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-10672/2022 | P | 993 | A | 4 | 20220609 |
| EPI_ISL_19213509 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00014510/2024 | P | 993 | L | 189 | 20240613 |
| EPI_ISL_17592071 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3056/2023 | P | 993 | C | 9 | 20230408 |
| EPI_ISL_6022911 | NSP3 | hCoV-19/England/PHEC-3N0BDNB0/2021 | P | 993 | I | 2 | 20211028 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | P | 993 | E | 2 | 20220121 |
| EPI_ISL_4530168 | NSP3 | hCoV-19/England/PHEC-3G071GE5/2021 | P | 993 | insWSLstopTYNFstop | 1 | 20210919 |
| EPI_ISL_19564352 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08968/2024 | P | 993 | F | 96 | 20241113 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 993 | Q | 1 | 20211006 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | P | 993 | N | 19 | 20230401 |
| EPI_ISL_19599890 | NSP3 | hCoV-19/USA/CA-CDPH-500141105/2024 | P | 993 | H | 20 | 20240722 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | P | 993 | Y | 1 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 993 | V | 3 | 20240816 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | P | 993 | del | 49 | 20231126 |
| EPI_ISL_19748060 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00022015_01/2024 | A | 994 | S | 358 | 20240829 |
| EPI_ISL_4175557 | NSP3 | hCoV-19/USA/ID-IBL-754710/2021 | A | 994 | insR | 1 | 20210901 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | A | 994 | P | 2 | 20230217 |
| EPI_ISL_18320016 | NSP3 | hCoV-19/Spain/GA-CHUVI-35528132/2023 | A | 994 | G | 13 | 20230824 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 994 | R | 3 | 20220210 |
| EPI_ISL_19592837 | NSP3 | hCoV-19/Brazil/PB-039442-IEC/2024 | A | 994 | D | 3204 | 20240916 |
| EPI_ISL_18743681 | NSP3 | hCoV-19/USA/TX-HMH-M-136749/2023 | A | 994 | L | 11 | 20231224 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | A | 994 | del | 46 | 20231126 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | A | 994 | I | 24 | 20230401 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | A | 994 | F | 1 | 20201214 |
| EPI_ISL_19756711 | NSP3 | hCoV-19/Australia/QLD0x01524C/2025 | A | 994 | T | 1380 | 20250210 |
| EPI_ISL_11887839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0814/2022 | A | 994 | M | 3 | 20220122 |
| EPI_ISL_19824122 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422284962/2025 | A | 994 | V | 6285 | 20250327 |
| EPI_ISL_12934152 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-123121-1483/2021 | A | 994 | C | 42 | 20211231 |
| EPI_ISL_1841323 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSAGOG-GSEQ-2215/2021 | A | 994 | N | 1 | 20210219 |
| EPI_ISL_17819968 | NSP3 | hCoV-19/Italy/VEN-ULSS3GEN-7002576221_VE/2023 | Q | 995 | E | 47 | 20230510 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Q | 995 | T | 10 | 20221226 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Q | 995 | del | 39 | 20231126 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Q | 995 | W | 3 | 20240816 |
| EPI_ISL_17442794 | NSP3 | hCoV-19/Canada/ON-PHL-23-20616/2023 | Q | 995 | K | 80 | 20230404 |
| EPI_ISL_17592053 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3011/2023 | Q | 995 | V | 11 | 20230408 |
| EPI_ISL_19680515 | NSP3 | hCoV-19/USA/OR-OSPHL10114/2024 | Q | 995 | L | 1304 | 20241219 |
| EPI_ISL_19386045 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBC67042/2024 | Q | 995 | stop | 25 | 20240827 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | Q | 995 | N | 4 | 20230217 |
| EPI_ISL_18864546 | NSP3 | hCoV-19/Argentina/INEI126352/2024 | Q | 995 | R | 235 | 20240102 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | Q | 995 | F | 1 | 20210106 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Q | 995 | Y | 4 | 20221012 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | Q | 995 | M | 6 | 20221226 |
| EPI_ISL_19784294 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12496-P0/2025 | Q | 995 | H | 2965 | 20250212 |
| EPI_ISL_3923180 | NSP3 | hCoV-19/USA/ID-IBL-646308/2020 | Q | 995 | insstop | 1 | 20200819 |
| EPI_ISL_19680044 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09547/2024 | Q | 995 | P | 62 | 20241220 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Q | 995 | A | 2 | 20240307 |
| EPI_ISL_17334024 | NSP3 | hCoV-19/Italy/LOM-ASST-69326548/2023 | Q | 995 | Z | 2 | 20230320 |
| EPI_ISL_18743681 | NSP3 | hCoV-19/USA/TX-HMH-M-136749/2023 | Q | 995 | S | 63 | 20231224 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | Q | 995 | C | 1 | 20221206 |
| EPI_ISL_15292733 | NSP3 | hCoV-19/India/GA-NCCS-3055200218757/2021 | Q | 995 | insFC | 1 | 20211211 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | Y | 996 | A | 1 | 20230217 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | Y | 996 | W | 4 | 20230401 |
| EPI_ISL_12735705 | NSP3 | hCoV-19/Spain/CT-HUGTiPM093CN1F4/2022 | Y | 996 | D | 2 | 20220507 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Y | 996 | del | 32 | 20231126 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | Y | 996 | R | 1 | 20200803 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 996 | Q | 1 | 20240307 |
| EPI_ISL_19829509 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022663_01/2025 | Y | 996 | C | 1818 | 20250203 |
| EPI_ISL_19070429 | NSP3 | hCoV-19/env/Germany/BY-LGL-6194253/2024 | Y | 996 | L | 16 | 20240403 |
| EPI_ISL_11507470 | NSP3 | hCoV-19/Turkey/HSGM-G7462/2022 | Y | 996 | K | 3 | 20220311 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 996 | F | 21 | 20240816 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 996 | T | 1 | 20210318 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Y | 996 | E | 4 | 20221012 |
| EPI_ISL_16829089 | NSP3 | hCoV-19/Italy/LOM-ASST-02024642/2023 | Y | 996 | S | 14 | 20230202 |
| EPI_ISL_19680515 | NSP3 | hCoV-19/USA/OR-OSPHL10114/2024 | Y | 996 | N | 788 | 20241219 |
| EPI_ISL_18743681 | NSP3 | hCoV-19/USA/TX-HMH-M-136749/2023 | Y | 996 | M | 36 | 20231224 |
| EPI_ISL_19705650 | NSP3 | hCoV-19/USA/CO-CDPHE-42867801/2025 | Y | 996 | H | 176 | 20250122 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | Y | 996 | V | 11 | 20230209 |
| EPI_ISL_17592053 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3011/2023 | Y | 996 | stop | 9 | 20230408 |
| EPI_ISL_19758039 | NSP3 | hCoV-19/New Zealand/25YA0505/2025 | E | 997 | A | 65 | 20250210 |
| EPI_ISL_17298738 | NSP3 | hCoV-19/England/PHEC-YYEP8GM/2023 | E | 997 | Z | 5 | 20230314 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | E | 997 | del | 31 | 20231126 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | E | 997 | C | 8 | 20220121 |
| EPI_ISL_5346598 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-58955/2021 | E | 997 | M | 1 | 20210826 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | E | 997 | T | 7 | 20230401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 997 | Y | 1 | 20210318 |
| EPI_ISL_19070429 | NSP3 | hCoV-19/env/Germany/BY-LGL-6194253/2024 | E | 997 | N | 62 | 20240403 |
| EPI_ISL_18635594 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJ1BA/2023 | E | 997 | V | 33 | 20231123 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | E | 997 | H | 9 | 20240816 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | E | 997 | S | 10 | 20230401 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | E | 997 | L | 12 | 20230104 |
| EPI_ISL_19660635 | NSP3 | hCoV-19/USA/CA-CDPH-500144876/2024 | E | 997 | Q | 62 | 20241114 |
| EPI_ISL_16829089 | NSP3 | hCoV-19/Italy/LOM-ASST-02024642/2023 | E | 997 | stop | 16 | 20230202 |
| EPI_ISL_19074227 | NSP3 | hCoV-19/USA/HI-TAMC_3440/2024 | E | 997 | D | 27 | 20240307 |
| EPI_ISL_19795629 | NSP3 | hCoV-19/Canada/ON-PHL-202504547/2025 | E | 997 | K | 249 | 20250228 |
| EPI_ISL_19617676 | NSP3 | hCoV-19/USA/WI-WSLH-2402819/2024 | E | 997 | G | 333 | 20241008 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 998 | insstopstop | 1 | 20230104 |
| EPI_ISL_5892399 | NSP3 | hCoV-19/Belgium/MBLGPF73312653/2021 | L | 998 | J | 3 | 20211024 |
| EPI_ISL_840293 | NSP3 | hCoV-19/England/OXON-F44502/2020 | L | 998 | Q | 1 | 20201223 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | L | 998 | F | 159 | 20230217 |
| EPI_ISL_12146208 | NSP3 | hCoV-19/Turkey/HSGM-GS1828/2022 | L | 998 | P | 5 | 20220401 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 998 | C | 1 | 20230104 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | L | 998 | stop | 4 | 20230401 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | L | 998 | G | 1 | 20240307 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | L | 998 | R | 38 | 20230401 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | L | 998 | V | 19 | 20230401 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | L | 998 | del | 31 | 20231126 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 998 | S | 4 | 20221226 |
| EPI_ISL_17513875 | NSP3 | hCoV-19/Austria/AGES-1134099/2023 | L | 998 | I | 46 | 20230411 |
| EPI_ISL_15292695 | NSP3 | hCoV-19/India/GA-NCCS-564088184/2021 | L | 998 | T | 3 | 20211105 |
| EPI_ISL_7547073 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100721-1038/2021 | L | 998 | M | 3 | 20211007 |
| EPI_ISL_15292705 | NSP3 | hCoV-19/India/MH-NCCS-2750000431279/2021 | L | 998 | Y | 6 | 20211211 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 998 | N | 1 | 20201214 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | L | 998 | A | 2 | 20240816 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | L | 998 | K | 1 | 20210806 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | L | 998 | insstopTstop | 1 | 20200814 |
| EPI_ISL_11950947 | NSP3 | hCoV-19/England/DHSC-CYYDHBO/2022 | L | 998 | H | 2 | 20220216 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | L | 998 | insLVstopstop | 5 | 20221226 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 999 | Y | 1 | 20230209 |
| EPI_ISL_3407873 | NSP3 | hCoV-19/Thailand/Roi Et_SEQ6345/2021 | K | 999 | P | 1 | 20210621 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 999 | V | 9 | 20230104 |
| EPI_ISL_19297305 | NSP3 | hCoV-19/Russia/SPE-RII-MH192078S/2024 | K | 999 | M | 20 | 20240529 |
| EPI_ISL_18700273 | NSP3 | hCoV-19/Israel/ICH-741200224/2023 | K | 999 | Q | 6 | 20231218 |
| EPI_ISL_19780187 | NSP3 | hCoV-19/France/HDF-RELAB-IPP02987/2025 | K | 999 | N | 2301 | 20250222 |
| EPI_ISL_4530168 | NSP3 | hCoV-19/England/PHEC-3G071GE5/2021 | K | 999 | H | 1 | 20210919 |
| EPI_ISL_19806954 | NSP3 | hCoV-19/Spain/CL-UCHV-50009/2025 | K | 999 | R | 307 | 20250228 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | K | 999 | insWstopIVLVV | 1 | 20210716 |
| EPI_ISL_18045317 | NSP3 | hCoV-19/USA/CA-HLX-STM-YTKX75S4Q/2023 | K | 999 | T | 53 | 20230706 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 999 | I | 2 | 20240816 |
| EPI_ISL_15292733 | NSP3 | hCoV-19/India/GA-NCCS-3055200218757/2021 | K | 999 | insTTCSVstopTstop | 1 | 20211211 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | K | 999 | A | 9 | 20230401 |
| EPI_ISL_18495507 | NSP3 | hCoV-19/Shanxi/TYCDC576/2023 | K | 999 | S | 40 | 20231020 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | K | 999 | insMV | 12 | 20210801 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | K | 999 | del | 43 | 20231126 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | K | 999 | D | 9 | 20230217 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | K | 999 | C | 1 | 20240307 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | K | 999 | stop | 4 | 20220119 |
| EPI_ISL_19802012 | NSP3 | hCoV-19/USA/IL-RIPHL_33491_G/2025 | K | 999 | E | 151 | 20250307 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | K | 999 | L | 13 | 20220227 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | H | 1000 | T | 1 | 20240307 |
| EPI_ISL_15292695 | NSP3 | hCoV-19/India/GA-NCCS-564088184/2021 | H | 1000 | A | 1 | 20211105 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | H | 1000 | S | 6 | 20240816 |
| EPI_ISL_8803760 | NSP3 | hCoV-19/India/GA-NCCS-3055100219829/2021 | H | 1000 | insXXXXXXXXXA | 1 | 20210731 |
| EPI_ISL_19783976 | NSP3 | hCoV-19/USA/CA-CDC-LC1134698/2025 | H | 1000 | R | 612 | 20250301 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | H | 1000 | V | 17 | 20220227 |
| EPI_ISL_19794982 | NSP3 | hCoV-19/Canada/QC-L00851484001/2025 | H | 1000 | Y | 2092 | 20250303 |
| EPI_ISL_19768639 | NSP3 | hCoV-19/Taiwan/CDC-W41705/2025 | H | 1000 | Q | 296 | 20250210 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | H | 1000 | C | 14 | 20221226 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | H | 1000 | del | 41 | 20231126 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | H | 1000 | insVXIV | 1 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | H | 1000 | E | 1 | 20210318 |
| EPI_ISL_19660660 | NSP3 | hCoV-19/USA/CA-CDPH-500144901/2024 | H | 1000 | P | 54 | 20241201 |
| EPI_ISL_19166875 | NSP3 | hCoV-19/Russia/KDA-RII-MH180836S/2024 | H | 1000 | N | 54 | 20240122 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | H | 1000 | W | 7 | 20230401 |
| EPI_ISL_8882782 | NSP3 | hCoV-19/India/MH-NCCS-2750000363655/2021 | H | 1000 | insLLVLV | 11 | 20210708 |
| EPI_ISL_15157227 | NSP3 | hCoV-19/India/GA-NCCS-602590432/2021 | H | 1000 | M | 3 | 20211214 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | H | 1000 | K | 5 | 20221012 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | H | 1000 | G | 2 | 20220121 |
| EPI_ISL_19620433 | NSP3 | hCoV-19/Canada/ON-PHL-202424069/2024 | H | 1000 | L | 273 | 20241207 |
| EPI_ISL_16460024 | NSP3 | hCoV-19/Canada/QC-L00570179001/2022 | H | 1000 | D | 6 | 20221227 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | H | 1000 | I | 1 | 20211006 |
| EPI_ISL_18758216 | NSP3 | hCoV-19/Henan/SMXCDC122210/2023 | G | 1001 | N | 14 | 20231217 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | G | 1001 | A | 7 | 20221230 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | G | 1001 | L | 16 | 20230401 |
| EPI_ISL_19612714 | NSP3 | hCoV-19/Finland/THL-09198/2024 | G | 1001 | D | 212 | 20241029 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | G | 1001 | F | 1 | 20230217 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | G | 1001 | stop | 3 | 20230401 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | G | 1001 | insstopLPVWSLstop | 5 | 20221226 |
| EPI_ISL_19831976 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGD7I/2025 | G | 1001 | S | 234525 | 20250321 |
| EPI_ISL_4530168 | NSP3 | hCoV-19/England/PHEC-3G071GE5/2021 | G | 1001 | R | 3 | 20210919 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | G | 1001 | Y | 9 | 20230401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1001 | K | 1 | 20210318 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | G | 1001 | W | 7 | 20230104 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | G | 1001 | T | 2 | 20221226 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | G | 1001 | C | 53 | 20240307 |
| EPI_ISL_16323797 | NSP3 | hCoV-19/Canada/ON-PHL-22-58956/2022 | G | 1001 | V | 11 | 20221219 |
| EPI_ISL_12934152 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-123121-1483/2021 | G | 1001 | M | 2 | 20211231 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | G | 1001 | del | 41 | 20230401 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | T | 1002 | L | 17 | 20230401 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 1002 | stop | 2 | 20230104 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1002 | insQIP | 3 | 20221012 |
| EPI_ISL_19781275 | NSP3 | hCoV-19/Japan/JCHO-2576/2024 | T | 1002 | K | 17 | 20241230 |
| EPI_ISL_19821100 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11186/2025 | T | 1002 | A | 535 | 20250320 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 1002 | F | 1 | 20221226 |
| EPI_ISL_17326687 | NSP3 | hCoV-19/Scotland/SCOT-27479/2023 | T | 1002 | R | 16 | 20230309 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | T | 1002 | del | 28 | 20230401 |
| EPI_ISL_19785494 | NSP3 | hCoV-19/Japan/FR302-0257/2025 | T | 1002 | I | 6221 | 20250225 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | T | 1002 | D | 1 | 20220119 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 1002 | Q | 1 | 20210801 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | T | 1002 | G | 1 | 20210803 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 1002 | P | 3 | 20240307 |
| EPI_ISL_19799567 | NSP3 | hCoV-19/USA/TX-HMH-M-147742/2025 | T | 1002 | S | 14 | 20250310 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | T | 1002 | Y | 2 | 20230209 |
| EPI_ISL_18403579 | NSP3 | hCoV-19/Netherlands/NB-RIVM-131913/2023 | T | 1002 | M | 5 | 20230926 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1002 | V | 9 | 20221012 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | T | 1002 | C | 3 | 20221024 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | T | 1002 | H | 2 | 20211115 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | T | 1002 | N | 6 | 20231126 |
| EPI_ISL_7640057 | NSP3 | hCoV-19/Greece/312361/2021 | T | 1002 | insQIXXXXXXXX | 1 | 20211130 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | F | 1003 | C | 5 | 20221012 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | F | 1003 | M | 1 | 20200715 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | F | 1003 | T | 7 | 20230401 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | F | 1003 | del | 31 | 20230401 |
| EPI_ISL_12610873 | NSP3 | hCoV-19/Turkey/HSGM-GS2802/2022 | F | 1003 | H | 2 | 20220407 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | F | 1003 | Y | 27 | 20231126 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | F | 1003 | insstopTGLRC | 1 | 20210106 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1003 | Q | 1 | 20220210 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | F | 1003 | I | 3 | 20240307 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | F | 1003 | V | 4 | 20230217 |
| EPI_ISL_15734346 | NSP3 | hCoV-19/USA/ID-IBL-862829/2022 | F | 1003 | insDVST | 2 | 20221024 |
| EPI_ISL_14180616 | NSP3 | hCoV-19/USA/TX-HMH-M-108426/2022 | F | 1003 | S | 4 | 20220720 |
| EPI_ISL_18455241 | NSP3 | hCoV-19/env/Ukraine/80593/2023 | F | 1003 | L | 54 | 20230911 |
| EPI_ISL_11507497 | NSP3 | hCoV-19/Turkey/HSGM-G7500/2022 | F | 1003 | stop | 1 | 20220311 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | F | 1003 | N | 1 | 20240816 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | F | 1003 | insN | 2 | 20210805 |
| EPI_ISL_19800231 | NSP3 | hCoV-19/Japan/FR048-0021/2025 | T | 1004 | A | 276 | 20250131 |
| EPI_ISL_19718091 | NSP3 | hCoV-19/Canada/ON-KHS-00457-v1/2025 | T | 1004 | N | 251 | 20250129 |
| EPI_ISL_19540186 | NSP3 | hCoV-19/USA/WA-SFS-S25624/2023 | T | 1004 | S | 8 | 20230414 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | T | 1004 | D | 1 | 20221230 |
| EPI_ISL_999091 | NSP3 | hCoV-19/England/OXON-F54F5C/2021 | T | 1004 | C | 2 | 20210113 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 1004 | P | 2 | 20230104 |
| EPI_ISL_17275352 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45878/2023 | T | 1004 | R | 3 | 20230217 |
| EPI_ISL_19819618 | NSP3 | hCoV-19/Australia/SA2511342/2025 | T | 1004 | I | 60949 | 20250328 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | T | 1004 | insL | 1 | 20210806 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | T | 1004 | stop | 15 | 20230401 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | T | 1004 | V | 27 | 20230217 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | T | 1004 | K | 1 | 20210106 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1004 | del | 28 | 20240816 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | T | 1004 | H | 1 | 20210813 |
| EPI_ISL_4056160 | NSP3 | hCoV-19/Malaysia/9280/2021 | T | 1004 | Y | 1 | 20210724 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | T | 1004 | L | 20 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 1004 | G | 1 | 20221226 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 1004 | Q | 4 | 20240307 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | C | 1005 | S | 10 | 20230209 |
| EPI_ISL_12934152 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-123121-1483/2021 | C | 1005 | M | 1 | 20211231 |
| EPI_ISL_12146198 | NSP3 | hCoV-19/Turkey/HSGM-GS1522/2022 | C | 1005 | stop | 14 | 20220401 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | C | 1005 | del | 29 | 20240816 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | C | 1005 | V | 6 | 20240307 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | C | 1005 | F | 12 | 20230401 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | C | 1005 | K | 3 | 20220121 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | C | 1005 | T | 1 | 20200715 |
| EPI_ISL_18922510 | NSP3 | hCoV-19/env/Ukraine/81504/2023 | C | 1005 | Y | 5 | 20231012 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1005 | D | 1 | 20210318 |
| EPI_ISL_18546494 | NSP3 | hCoV-19/USA/TX-HMH-M-135144/2023 | C | 1005 | W | 1 | 20231022 |
| EPI_ISL_5747735 | NSP3 | hCoV-19/France/BFC-HMN-21102260487/2021 | C | 1005 | R | 1 | 20211015 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1005 | L | 7 | 20220210 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | C | 1005 | I | 23 | 20220227 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | C | 1005 | insstopstopVHWstopLPV | 1 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | C | 1005 | H | 1 | 20221226 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | A | 1006 | Q | 15 | 20230401 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | A | 1006 | insVstopTstop | 13 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1006 | N | 1 | 20220210 |
| EPI_ISL_10820529 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-78888/2022 | A | 1006 | P | 2 | 20220111 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | A | 1006 | del | 47 | 20231126 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | A | 1006 | D | 41 | 20230217 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | A | 1006 | insVstopTstopAWYIYLC | 2 | 20221031 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | A | 1006 | G | 7 | 20240816 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | A | 1006 | E | 1 | 20230217 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | A | 1006 | stop | 11 | 20230401 |
| EPI_ISL_15292705 | NSP3 | hCoV-19/India/MH-NCCS-2750000431279/2021 | A | 1006 | insstopTstop | 1 | 20211211 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | A | 1006 | W | 3 | 20230401 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | A | 1006 | L | 2 | 20200803 |
| EPI_ISL_4175557 | NSP3 | hCoV-19/USA/ID-IBL-754710/2021 | A | 1006 | C | 1 | 20210901 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | A | 1006 | Y | 1 | 20210806 |
| EPI_ISL_12321606 | NSP3 | hCoV-19/Turkey/HSGM-GS2454/2022 | A | 1006 | T | 28 | 20220405 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | A | 1006 | K | 1 | 20221226 |
| EPI_ISL_19071004 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6673/2024 | A | 1006 | S | 68 | 20240321 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | A | 1006 | F | 1 | 20210813 |
| EPI_ISL_19757046 | NSP3 | hCoV-19/Sweden/S-1261052765RK/2025 | A | 1006 | V | 2526 | 20250202 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | S | 1007 | insI | 2 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | S | 1007 | T | 1 | 20240816 |
| EPI_ISL_18964182 | NSP3 | hCoV-19/USA/CA-CDPH-500133028/2024 | S | 1007 | I | 213 | 20240114 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | S | 1007 | A | 16 | 20230401 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | S | 1007 | K | 6 | 20240307 |
| EPI_ISL_19821907 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136259/2025 | S | 1007 | N | 695 | 20250326 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | S | 1007 | insLstop | 1 | 20210716 |
| EPI_ISL_4530168 | NSP3 | hCoV-19/England/PHEC-3G071GE5/2021 | S | 1007 | Y | 2 | 20210919 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | S | 1007 | stop | 4 | 20230217 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | S | 1007 | P | 2 | 20210816 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 1007 | L | 3 | 20221226 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | S | 1007 | H | 14 | 20230401 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | S | 1007 | del | 29 | 20231126 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | S | 1007 | R | 13 | 20230401 |
| EPI_ISL_19405243 | NSP3 | hCoV-19/USA/HI-H2330736/2024 | S | 1007 | G | 8 | 20240803 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | S | 1007 | V | 5 | 20220729 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | S | 1007 | M | 2 | 20210114 |
| EPI_ISL_19735057 | NSP3 | hCoV-19/USA/MN-MDH-46058/2025 | S | 1007 | C | 292 | 20250129 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 1008 | P | 1 | 20210318 |
| EPI_ISL_19650861 | NSP3 | hCoV-19/Sweden/C-000200811472N2/2024 | E | 1008 | A | 278 | 20241209 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 1008 | S | 8 | 20230101 |
| EPI_ISL_19808195 | NSP3 | hCoV-19/Canada/ON-PHL-202504313/2025 | E | 1008 | D | 378 | 20250217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1008 | I | 1 | 20220210 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | E | 1008 | N | 10 | 20230401 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | E | 1008 | W | 17 | 20230401 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | E | 1008 | L | 3 | 20230401 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | E | 1008 | H | 13 | 20230401 |
| EPI_ISL_19637742 | NSP3 | hCoV-19/Russia/TA-RII-MH214618S/2024 | E | 1008 | V | 130 | 20241115 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | E | 1008 | K | 16 | 20240816 |
| EPI_ISL_19724660 | NSP3 | hCoV-19/Canada/QC-L00840292001/2025 | E | 1008 | G | 269 | 20250203 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | E | 1008 | T | 1 | 20210716 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 1008 | insGC | 1 | 20230108 |
| EPI_ISL_10220559 | NSP3 | hCoV-19/France/GES-HMN-22022041132/2022 | E | 1008 | stop | 2 | 20220117 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | E | 1008 | del | 32 | 20231126 |
| EPI_ISL_12146085 | NSP3 | hCoV-19/Turkey/HSGM-GS1800/2022 | E | 1008 | R | 4 | 20220401 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | E | 1008 | Q | 7 | 20221012 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | Y | 1009 | insQLPVWSLstop | 1 | 20210806 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1009 | G | 1 | 20210318 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | Y | 1009 | V | 25 | 20220227 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Y | 1009 | L | 18 | 20230401 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | Y | 1009 | I | 1 | 20220119 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 1009 | R | 1 | 20240816 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Y | 1009 | del | 23 | 20231126 |
| EPI_ISL_19081518 | NSP3 | hCoV-19/Russia/MO-RII-MH184551S/2024 | Y | 1009 | F | 20 | 20240402 |
| EPI_ISL_15927793 | NSP3 | hCoV-19/Turkey/KSS-PCTSH4882289047/2022 | Y | 1009 | C | 3 | 20221107 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | Y | 1009 | insLXXTSVVIstop | 1 | 20210812 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | Y | 1009 | stop | 10 | 20230401 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Y | 1009 | A | 3 | 20221012 |
| EPI_ISL_1370710 | NSP3 | hCoV-19/Netherlands/GE-RIVM-18542/2021 | Y | 1009 | N | 2 | 20210307 |
| EPI_ISL_17700574 | NSP3 | hCoV-19/Brazil/MG-LBI-GP37/2021 | Y | 1009 | insT | 1 | 20210514 |
| EPI_ISL_18385484 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482893/2023 | Y | 1009 | K | 1 | 20231004 |
| EPI_ISL_18879482 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-SG-44/2024 | Y | 1009 | H | 71 | 20240122 |
| EPI_ISL_3923180 | NSP3 | hCoV-19/USA/ID-IBL-646308/2020 | Y | 1009 | E | 1 | 20200819 |
| EPI_ISL_11348092 | NSP3 | hCoV-19/Belarus/HM-CRIE-7735754713/2022 | Y | 1009 | S | 3 | 20220103 |
| EPI_ISL_19541652 | NSP3 | hCoV-19/Russia/SPE-RII-MH207962S/2024 | Y | 1009 | T | 9 | 20240930 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | Y | 1009 | insTVVLstopVWSLstop | 1 | 20210803 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1010 | F | 2 | 20240816 |
| EPI_ISL_19758568 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10512/2025 | T | 1010 | N | 691 | 20250127 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1010 | W | 1 | 20220210 |
| EPI_ISL_2312551 | NSP3 | hCoV-19/Greece/110764/2020 | T | 1010 | M | 1 | 20201130 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | T | 1010 | L | 18 | 20230401 |
| EPI_ISL_14392800 | NSP3 | hCoV-19/India/GA-NCCS-3055200195274/2021 | T | 1010 | insYLCstopstopVH | 1 | 20211019 |
| EPI_ISL_10829444 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84185/2022 | T | 1010 | K | 5 | 20220121 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | T | 1010 | P | 1 | 20230209 |
| EPI_ISL_19812398 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147960/2025 | T | 1010 | A | 1409 | 20250317 |
| EPI_ISL_19621700 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000643001/2024 | T | 1010 | S | 15 | 20241120 |
| EPI_ISL_19735488 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56307/2025 | T | 1010 | I | 1273 | 20250205 |
| EPI_ISL_4198511 | NSP3 | hCoV-19/Italy/SAR-3119/2021 | T | 1010 | insH | 1 | 20210902 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | T | 1010 | del | 24 | 20231126 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | T | 1010 | V | 15 | 20230401 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | T | 1010 | Q | 3 | 20240307 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | G | 1011 | I | 23 | 20220227 |
| EPI_ISL_8803744 | NSP3 | hCoV-19/India/MH-NCCS-56193/2021 | G | 1011 | insstopTstopAWYIYLCstopstopVHC | 1 | 20210808 |
| EPI_ISL_12753428 | NSP3 | hCoV-19/Russia/LIP-CRIE-7728246215/2022 | G | 1011 | R | 3 | 20220207 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | G | 1011 | L | 10 | 20230401 |
| EPI_ISL_13996013 | NSP3 | hCoV-19/env/USA/CA-SEARCH-90684/2022 | G | 1011 | C | 2 | 20220503 |
| EPI_ISL_14727158 | NSP3 | hCoV-19/Singapore/10811/2022 | G | 1011 | V | 11 | 20220801 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1011 | M | 1 | 20220210 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 1011 | Q | 1 | 20230108 |
| EPI_ISL_15162802 | NSP3 | hCoV-19/India/MH-NCCS-588285776/2021 | G | 1011 | W | 3 | 20211130 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | G | 1011 | P | 1 | 20210801 |
| EPI_ISL_2304088 | NSP3 | hCoV-19/India/MH-NCCS-AFMC-48074/2021 | G | 1011 | insstopTstopAWY | 1 | 20210419 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | G | 1011 | insM | 11 | 20230401 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | G | 1011 | S | 17 | 20230401 |
| EPI_ISL_18462839 | NSP3 | hCoV-19/env/Ukraine/80843/2023 | G | 1011 | del | 47 | 20230921 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | G | 1011 | D | 42 | 20240816 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | G | 1011 | E | 3 | 20240307 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | G | 1011 | K | 1 | 20210526 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | G | 1011 | Y | 8 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | G | 1011 | A | 4 | 20221226 |
| EPI_ISL_19773770 | NSP3 | hCoV-19/Hong Kong/HKDH-VB25076047/2025 | N | 1012 | S | 282 | 20250302 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | N | 1012 | H | 15 | 20231126 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | N | 1012 | insPVLP | 1 | 20240816 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | N | 1012 | stop | 1 | 20210816 |
| EPI_ISL_19832657 | NSP3 | hCoV-19/Canada/BC-BCCDC-771176/2025 | N | 1012 | T | 83 | 20250304 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | N | 1012 | P | 3 | 20221226 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | N | 1012 | E | 3 | 20230209 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1012 | L | 2 | 20220210 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | N | 1012 | Y | 47 | 20240307 |
| EPI_ISL_19285652 | NSP3 | hCoV-19/Denmark/DCGC-686976/2024 | N | 1012 | D | 773 | 20240624 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1012 | V | 3 | 20230101 |
| EPI_ISL_19038138 | NSP3 | hCoV-19/USA/CA-CDPH-500132985/2024 | N | 1012 | K | 114 | 20240112 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | N | 1012 | del | 42 | 20230401 |
| EPI_ISL_17359781 | NSP3 | hCoV-19/Spain/AS-HUCA-232318820/2023 | N | 1012 | B | 11 | 20230321 |
| EPI_ISL_18439369 | NSP3 | hCoV-19/South Korea/KDCA269014/2023 | N | 1012 | I | 10 | 20230926 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1013 | K | 1 | 20230108 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1013 | T | 1 | 20230101 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 1013 | S | 2 | 20240307 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | Y | 1013 | insstopRNFVLHR | 1 | 20230401 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | Y | 1013 | I | 21 | 20220227 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1013 | W | 3 | 20220210 |
| EPI_ISL_18945073 | NSP3 | hCoV-19/France/HDF-IPP03117/2024 | Y | 1013 | N | 20 | 20240205 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | Y | 1013 | insN | 1 | 20230217 |
| EPI_ISL_19806240 | NSP3 | hCoV-19/Japan/FR023-0012/2025 | Y | 1013 | H | 1077 | 20250127 |
| EPI_ISL_9336196 | NSP3 | hCoV-19/USA/TX-CDC-FG-244486/2022 | Y | 1013 | D | 2 | 20220114 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | Y | 1013 | insstopLLRNFVLHR | 9 | 20210328 |
| EPI_ISL_19425297 | NSP3 | hCoV-19/Netherlands/UT-RIVM-141807/2024 | Y | 1013 | C | 128 | 20240909 |
| EPI_ISL_12753098 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726729194/2022 | Y | 1013 | stop | 3 | 20220203 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Y | 1013 | L | 15 | 20230401 |
| EPI_ISL_11944266 | NSP3 | hCoV-19/England/DHSC-CYN6N8F/2022 | Y | 1013 | G | 1 | 20220125 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | Y | 1013 | insstopLLKK | 3 | 20211018 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | Y | 1013 | del | 33 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 1013 | F | 43 | 20240816 |
| EPI_ISL_17425898 | NSP3 | hCoV-19/India/MH-CSIR-2897/2023 | Y | 1013 | R | 10 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Y | 1013 | P | 1 | 20221226 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | Q | 1014 | T | 6 | 20221204 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Q | 1014 | F | 1 | 20230101 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | Q | 1014 | D | 1 | 20210526 |
| EPI_ISL_15157227 | NSP3 | hCoV-19/India/GA-NCCS-602590432/2021 | Q | 1014 | P | 2 | 20211214 |
| EPI_ISL_12753098 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726729194/2022 | Q | 1014 | H | 7 | 20220203 |
| EPI_ISL_19370882 | NSP3 | hCoV-19/USA/PA-PHL2-A-F11-0105/2023 | Q | 1014 | E | 10 | 20231225 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Q | 1014 | N | 1 | 20240816 |
| EPI_ISL_16761963 | NSP3 | hCoV-19/USA/TX-HMH-M-124199/2023 | Q | 1014 | stop | 9 | 20230124 |
| EPI_ISL_19804885 | NSP3 | hCoV-19/USA/NM-USAFSAM-S23506/2025 | Q | 1014 | R | 268 | 20250303 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Q | 1014 | del | 35 | 20231126 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Q | 1014 | A | 1 | 20221226 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Q | 1014 | S | 17 | 20230401 |
| EPI_ISL_19824358 | NSP3 | hCoV-19/Mexico/CMX-INER-INMEGEN-3188/2025 | Q | 1014 | L | 84 | 20250227 |
| EPI_ISL_18695233 | NSP3 | hCoV-19/Germany/BY-LGL-6098675/2023 | Q | 1014 | Z | 3 | 20231207 |
| EPI_ISL_17884117 | NSP3 | hCoV-19/Japan/PG-530241/2023 | Q | 1014 | K | 100 | 20230527 |
| EPI_ISL_15292719 | NSP3 | hCoV-19/India/MH-NCCS-2748700686840/2021 | C | 1015 | insstopXXXXXXXX | 1 | 20211207 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | C | 1015 | L | 6 | 20230217 |
| EPI_ISL_19729014 | NSP3 | hCoV-19/USA/CA-SCPHL-25WGS00042/2025 | C | 1015 | Y | 953 | 20250204 |
| EPI_ISL_19670683 | NSP3 | hCoV-19/Canada/BC-BCCDC-760734/2024 | C | 1015 | R | 2318 | 20241218 |
| EPI_ISL_5007138 | NSP3 | hCoV-19/South Korea/KDCA12481/2021 | C | 1015 | P | 1 | 20210818 |
| EPI_ISL_19504463 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-1820-2693/2024 | C | 1015 | stop | 2 | 20240925 |
| EPI_ISL_18895857 | NSP3 | hCoV-19/env/Germany/BY-LGL-6128256/2024 | C | 1015 | G | 21 | 20240124 |
| EPI_ISL_15157227 | NSP3 | hCoV-19/India/GA-NCCS-602590432/2021 | C | 1015 | V | 3 | 20211214 |
| EPI_ISL_13324237 | NSP3 | hCoV-19/France/IDF-IPP37942/2022 | C | 1015 | W | 6 | 20220530 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1015 | N | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1015 | K | 1 | 20210318 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | C | 1015 | M | 12 | 20230401 |
| EPI_ISL_19695118 | NSP3 | hCoV-19/Denmark/DCGC-691643/2025 | C | 1015 | F | 140 | 20250113 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | C | 1015 | D | 3 | 20240816 |
| EPI_ISL_7508906 | NSP3 | hCoV-19/USA/CA-CSMC434/2020 | C | 1015 | I | 1 | 20201230 |
| EPI_ISL_4198511 | NSP3 | hCoV-19/Italy/SAR-3119/2021 | C | 1015 | insASEYTGNYQC | 1 | 20210902 |
| EPI_ISL_8806255 | NSP3 | hCoV-19/India/MH-NCCS-2748700648013/2021 | C | 1015 | insstopstopVHWstopLPV | 1 | 20211026 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | C | 1015 | T | 1 | 20240307 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | C | 1015 | insIA | 2 | 20211018 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | C | 1015 | insstopstop | 13 | 20230401 |
| EPI_ISL_18470549 | NSP3 | hCoV-19/Canada/ON-PHL-23-38337/2023 | C | 1015 | S | 44 | 20231028 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | C | 1015 | del | 34 | 20231126 |
| EPI_ISL_17033973 | NSP3 | hCoV-19/Puerto Rico/PR-PRI66014/2022 | G | 1016 | C | 1 | 20221024 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | G | 1016 | del | 36 | 20231126 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | G | 1016 | N | 4 | 20230104 |
| EPI_ISL_4175557 | NSP3 | hCoV-19/USA/ID-IBL-754710/2021 | G | 1016 | P | 1 | 20210901 |
| EPI_ISL_2312551 | NSP3 | hCoV-19/Greece/110764/2020 | G | 1016 | E | 1 | 20201130 |
| EPI_ISL_15157227 | NSP3 | hCoV-19/India/GA-NCCS-602590432/2021 | G | 1016 | W | 2 | 20211214 |
| EPI_ISL_16391779 | NSP3 | hCoV-19/Japan/RIMD20955/2022 | G | 1016 | S | 8 | 20220902 |
| EPI_ISL_12610887 | NSP3 | hCoV-19/Turkey/HSGM-G8676/2022 | G | 1016 | A | 3 | 20220407 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | G | 1016 | L | 1 | 20210716 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | G | 1016 | M | 1 | 20221226 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | G | 1016 | F | 21 | 20230401 |
| EPI_ISL_19504456 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-105782/2024 | G | 1016 | T | 36 | 20240916 |
| EPI_ISL_1415154 | NSP3 | hCoV-19/India/MH-NCCS-77867/2020 | G | 1016 | I | 1 | 20200917 |
| EPI_ISL_14583753 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS.22.16618/2022 | G | 1016 | D | 3 | 20220723 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | G | 1016 | K | 2 | 20221230 |
| EPI_ISL_19071004 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6673/2024 | G | 1016 | V | 32 | 20240321 |
| EPI_ISL_7307524 | NSP3 | hCoV-19/France/IDF-HMN-21112290426/2021 | G | 1016 | R | 1 | 20211129 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 1016 | Y | 1 | 20230101 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | G | 1016 | stop | 3 | 20211018 |
| EPI_ISL_15157227 | NSP3 | hCoV-19/India/GA-NCCS-602590432/2021 | H | 1017 | S | 1 | 20211214 |
| EPI_ISL_1415154 | NSP3 | hCoV-19/India/MH-NCCS-77867/2020 | H | 1017 | A | 1 | 20200917 |
| EPI_ISL_1415154 | NSP3 | hCoV-19/India/MH-NCCS-77867/2020 | H | 1017 | insstopT | 1 | 20200917 |
| EPI_ISL_12771894 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726731434/2022 | H | 1017 | K | 1 | 20220204 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | H | 1017 | V | 2 | 20240816 |
| EPI_ISL_18411074 | NSP3 | hCoV-19/South Korea/KDCA268047/2023 | H | 1017 | N | 5 | 20230912 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | H | 1017 | L | 4 | 20240307 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | H | 1017 | D | 20 | 20230101 |
| EPI_ISL_17705345 | NSP3 | hCoV-19/Puerto Rico/PR-I84334/2023 | H | 1017 | Y | 5 | 20230420 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | H | 1017 | G | 1 | 20230217 |
| EPI_ISL_18924423 | NSP3 | hCoV-19/South Korea/KDCA285566/2024 | H | 1017 | R | 4 | 20240130 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | H | 1017 | del | 34 | 20231126 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | H | 1017 | F | 8 | 20230104 |
| EPI_ISL_16311862 | NSP3 | hCoV-19/Angola/CERI-KRISP-K050446/2022 | H | 1017 | Q | 5 | 20221010 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | H | 1017 | insLstopT | 1 | 20211229 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | H | 1017 | T | 23 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | H | 1017 | M | 1 | 20221226 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 1017 | I | 1 | 20220210 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | Y | 1018 | K | 2 | 20210526 |
| EPI_ISL_10313605 | NSP3 | hCoV-19/France/GES-HMN-22022041141/2022 | Y | 1018 | T | 2 | 20220117 |
| EPI_ISL_2272512 | NSP3 | hCoV-19/Mexico/SIN-CIAD-L8553/2021 | Y | 1018 | C | 2 | 20210413 |
| EPI_ISL_17275304 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45829/2023 | Y | 1018 | S | 6 | 20230217 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | Y | 1018 | W | 15 | 20230401 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | Y | 1018 | insstopLPVWS | 1 | 20211031 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1018 | N | 1 | 20230108 |
| EPI_ISL_15292705 | NSP3 | hCoV-19/India/MH-NCCS-2750000431279/2021 | Y | 1018 | insstopLPVWXX | 1 | 20211211 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Y | 1018 | L | 14 | 20230401 |
| EPI_ISL_5854760 | NSP3 | hCoV-19/Nigeria/MRL-OS-2079/2021 | Y | 1018 | D | 14 | 20210630 |
| EPI_ISL_14901805 | NSP3 | hCoV-19/Mexico/GRO_CIAD-IMSS_01097018/2022 | Y | 1018 | stop | 8 | 20220823 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Y | 1018 | insLVLVST | 5 | 20230401 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | Y | 1018 | insstopLPVWSLstopT | 1 | 20230401 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | Y | 1018 | insstopLPVWSLstop | 2 | 20230401 |
| EPI_ISL_18722726 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048306/2023 | Y | 1018 | del | 30 | 20231126 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | Y | 1018 | insstopL | 1 | 20210825 |
| EPI_ISL_18411074 | NSP3 | hCoV-19/South Korea/KDCA268047/2023 | Y | 1018 | F | 10 | 20230912 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | Y | 1018 | R | 1 | 20210716 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | Y | 1018 | insstop | 6 | 20221206 |
| EPI_ISL_3010069 | NSP3 | hCoV-19/Spain/CT-HUJ23-17488/2021 | Y | 1018 | I | 1 | 20210712 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Y | 1018 | V | 11 | 20230104 |
| EPI_ISL_19140727 | NSP3 | hCoV-19/Pakistan/CHL30476/2024 | Y | 1018 | H | 7 | 20240307 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | K | 1019 | M | 1 | 20210803 |
| EPI_ISL_12753098 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726729194/2022 | K | 1019 | stop | 5 | 20220203 |
| EPI_ISL_4175557 | NSP3 | hCoV-19/USA/ID-IBL-754710/2021 | K | 1019 | insLstopT | 1 | 20210901 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | K | 1019 | Y | 2 | 20230401 |
| EPI_ISL_2304088 | NSP3 | hCoV-19/India/MH-NCCS-AFMC-48074/2021 | K | 1019 | insLPVWSLstop | 2 | 20210419 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 1019 | N | 16 | 20230108 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | K | 1019 | del | 24 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1019 | A | 2 | 20210318 |
| EPI_ISL_18075156 | NSP3 | hCoV-19/Norway/8080/2023 | K | 1019 | T | 14 | 20230713 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | K | 1019 | V | 2 | 20220923 |
| EPI_ISL_18385484 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482893/2023 | K | 1019 | Q | 8 | 20231004 |
| EPI_ISL_17275304 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45829/2023 | K | 1019 | H | 2 | 20230217 |
| EPI_ISL_19392453 | NSP3 | hCoV-19/USA/CA-SEARCH-141289/2024 | K | 1019 | R | 183 | 20240711 |
| EPI_ISL_17385331 | NSP3 | hCoV-19/Romania/B-547718/2023 | K | 1019 | I | 29 | 20230306 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1019 | F | 3 | 20240816 |
| EPI_ISL_12320529 | NSP3 | hCoV-19/Turkey/HSGM-GS2034/2022 | K | 1019 | E | 2 | 20220401 |
| EPI_ISL_11348092 | NSP3 | hCoV-19/Belarus/HM-CRIE-7735754713/2022 | K | 1019 | P | 2 | 20220103 |
| EPI_ISL_7547081 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-090121-1082/2021 | K | 1019 | insVLVSTLVITSVVTI | 1 | 20210901 |
| EPI_ISL_14441098 | NSP3 | hCoV-19/India/OR-ILSGS18766/2022 | K | 1019 | G | 1 | 20220713 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 1019 | S | 2 | 20230101 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | K | 1019 | L | 26 | 20230401 |
| EPI_ISL_18436053 | NSP3 | hCoV-19/Italy/LOM-69495577/2023 | H | 1020 | N | 14 | 20231019 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | H | 1020 | E | 3 | 20230209 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | H | 1020 | P | 9 | 20221226 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | H | 1020 | G | 1 | 20210318 |
| EPI_ISL_4530168 | NSP3 | hCoV-19/England/PHEC-3G071GE5/2021 | H | 1020 | insNSYT | 2 | 20210919 |
| EPI_ISL_12321606 | NSP3 | hCoV-19/Turkey/HSGM-GS2454/2022 | H | 1020 | L | 3 | 20220405 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | H | 1020 | K | 3 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | H | 1020 | A | 1 | 20240816 |
| EPI_ISL_7508906 | NSP3 | hCoV-19/USA/CA-CSMC434/2020 | H | 1020 | S | 1 | 20201230 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | H | 1020 | del | 17 | 20230217 |
| EPI_ISL_13147867 | NSP3 | hCoV-19/Paraguay/410682/2022 | H | 1020 | D | 1 | 20220127 |
| EPI_ISL_19166805 | NSP3 | hCoV-19/Russia/KDA-RII-MH181068S/2024 | H | 1020 | Q | 3 | 20240212 |
| EPI_ISL_17275304 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45829/2023 | H | 1020 | R | 1 | 20230217 |
| EPI_ISL_19825287 | NSP3 | hCoV-19/USA/NY-NYULH-22570/2025 | H | 1020 | Y | 2078 | 20250401 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | H | 1020 | V | 34 | 20230401 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | H | 1020 | stop | 3 | 20220227 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | H | 1020 | F | 3 | 20211229 |
| EPI_ISL_14441098 | NSP3 | hCoV-19/India/OR-ILSGS18766/2022 | H | 1020 | C | 2 | 20220713 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | H | 1020 | T | 6 | 20230101 |
| EPI_ISL_10858527 | NSP3 | hCoV-19/Turkey/HSGM-G2435/2022 | I | 1021 | R | 2 | 20220217 |
| EPI_ISL_17271114 | NSP3 | hCoV-19/Sweden/CMHH-03_SE600_000200520104N2/2023 | I | 1021 | J | 3 | 20230112 |
| EPI_ISL_19483463 | NSP3 | hCoV-19/Canada/ON-PHL-202416708/2024 | I | 1021 | V | 1587 | 20241004 |
| EPI_ISL_13437669 | NSP3 | hCoV-19/New Zealand/22MV3193/2022 | I | 1021 | insNGCH | 1 | 20220612 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | I | 1021 | D | 2 | 20210526 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | I | 1021 | S | 2 | 20240816 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | I | 1021 | del | 15 | 20230217 |
| EPI_ISL_18352009 | NSP3 | hCoV-19/USA/MS-MSPHL-0766/2023 | I | 1021 | T | 9 | 20230921 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 1021 | K | 2 | 20230108 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | I | 1021 | F | 3 | 20230401 |
| EPI_ISL_2304088 | NSP3 | hCoV-19/India/MH-NCCS-AFMC-48074/2021 | I | 1021 | Y | 3 | 20210419 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | I | 1021 | L | 44 | 20230401 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | I | 1021 | W | 1 | 20201214 |
| EPI_ISL_19742309 | NSP3 | hCoV-19/South Korea/KDCA296951/2025 | I | 1021 | M | 10 | 20250121 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | I | 1021 | stop | 4 | 20211229 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | I | 1021 | N | 1 | 20230401 |
| EPI_ISL_17275304 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45829/2023 | I | 1021 | A | 2 | 20230217 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | I | 1021 | P | 1 | 20230217 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | T | 1022 | R | 20 | 20230401 |
| EPI_ISL_19806155 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YFQIA/2025 | T | 1022 | N | 292 | 20250303 |
| EPI_ISL_12146208 | NSP3 | hCoV-19/Turkey/HSGM-GS1828/2022 | T | 1022 | P | 3 | 20220401 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | T | 1022 | W | 6 | 20221206 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | T | 1022 | Y | 1 | 20211115 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 1022 | E | 1 | 20221226 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1022 | C | 2 | 20230101 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | T | 1022 | stop | 5 | 20230401 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | T | 1022 | F | 5 | 20230401 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1022 | V | 9 | 20221012 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | T | 1022 | del | 17 | 20230217 |
| EPI_ISL_19189262 | NSP3 | hCoV-19/USA/CA-Stanford-183_S30/2024 | T | 1022 | A | 92 | 20240428 |
| EPI_ISL_14180241 | NSP3 | hCoV-19/USA/TX-HMH-M-108289/2022 | T | 1022 | L | 8 | 20220720 |
| EPI_ISL_18798005 | NSP3 | hCoV-19/Denmark/DCGC-670426/2024 | T | 1022 | S | 11 | 20240101 |
| EPI_ISL_19831932 | NSP3 | hCoV-19/England/CLIMB-CM7YGUNB/2025 | T | 1022 | I | 18871 | 20250405 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | T | 1022 | Q | 3 | 20211018 |
| EPI_ISL_12196553 | NSP3 | hCoV-19/Germany/BW-RKI-I-726927/2022 | S | 1023 | P | 4 | 20220407 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | S | 1023 | insINIstopLL | 1 | 20210825 |
| EPI_ISL_15872202 | NSP3 | hCoV-19/Russia/MOW-PMVL-DZ-34570085506/2022 | S | 1023 | insTPADF | 1 | 20220109 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | S | 1023 | R | 1 | 20230401 |
| EPI_ISL_19564855 | NSP3 | hCoV-19/England/CLIMB-CM7Y876N/2024 | S | 1023 | A | 43 | 20241118 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | S | 1023 | N | 2 | 20211229 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | S | 1023 | stop | 2 | 20230401 |
| EPI_ISL_2472372 | NSP3 | hCoV-19/Germany/BE-RKI-I-173205/2021 | S | 1023 | insXXX | 1 | 20210601 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | S | 1023 | D | 1 | 20230217 |
| EPI_ISL_18754976 | NSP3 | hCoV-19/England/CLIMB-CM7YGMFN/2023 | S | 1023 | C | 28 | 20231230 |
| EPI_ISL_15885286 | NSP3 | hCoV-19/Russia/MOW-PMVL-DZ-50549791050/2022 | S | 1023 | insTPSDF | 15 | 20220224 |
| EPI_ISL_19521741 | NSP3 | hCoV-19/Liaoning/LNCDC-364-2/2024 | S | 1023 | T | 5 | 20241015 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | S | 1023 | I | 23 | 20230401 |
| EPI_ISL_19741547 | NSP3 | hCoV-19/USA/CA-PFZ04308/2025 | S | 1023 | F | 1311 | 20250208 |
| EPI_ISL_12190404 | NSP3 | hCoV-19/France/GES-LBZCentre-ER220307060/2022 | S | 1023 | insL | 1 | 20220307 |
| EPI_ISL_17281102 | NSP3 | hCoV-19/Sweden/03_SE600_500000259429SP/2023 | S | 1023 | L | 15 | 20230131 |
| EPI_ISL_12582769 | NSP3 | hCoV-19/Turkey/HSGM-G8446/2022 | S | 1023 | W | 1 | 20220401 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | S | 1023 | E | 1 | 20240816 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | S | 1023 | K | 7 | 20220227 |
| EPI_ISL_14584696 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16381/2022 | S | 1023 | Y | 12 | 20220726 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 1023 | Q | 4 | 20221226 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | S | 1023 | del | 19 | 20230217 |
| EPI_ISL_18785808 | NSP3 | hCoV-19/Mexico/MEX_InDRE_FB4834/2023 | K | 1024 | I | 21 | 20231014 |
| EPI_ISL_17592087 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3018/2023 | K | 1024 | stop | 6 | 20230410 |
| EPI_ISL_19001180 | NSP3 | hCoV-19/Taiwan/CDC-F91549/2024 | K | 1024 | N | 143 | 20240318 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1024 | Y | 1 | 20210318 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | K | 1024 | F | 1 | 20211115 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | K | 1024 | insLVI | 3 | 20220209 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | K | 1024 | del | 21 | 20230217 |
| EPI_ISL_19502664 | NSP3 | hCoV-19/Russia/SPE-RII-MH198816S/2024 | K | 1024 | Q | 27 | 20240911 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1024 | S | 1 | 20220210 |
| EPI_ISL_19673196 | NSP3 | hCoV-19/Canada/NL-NML-760616/2024 | K | 1024 | R | 276 | 20241230 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | K | 1024 | A | 3 | 20211222 |
| EPI_ISL_19382402 | NSP3 | hCoV-19/Canada/AB-ABPHL-122097/2024 | K | 1024 | E | 34 | 20240821 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | K | 1024 | T | 25 | 20221230 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | K | 1024 | P | 4 | 20230217 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1024 | L | 11 | 20230209 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | K | 1024 | V | 13 | 20230401 |
| EPI_ISL_19134080 | NSP3 | hCoV-19/env/Germany/BY-LGL-6219906/2024 | E | 1025 | K | 199 | 20240417 |
| EPI_ISL_19373567 | NSP3 | hCoV-19/Mexico/MIC_InDRE_FB943/2024 | E | 1025 | G | 59 | 20240409 |
| EPI_ISL_18450581 | NSP3 | hCoV-19/England/CLIMB-CM7YFWRR/2023 | E | 1025 | Q | 22 | 20231017 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | E | 1025 | N | 9 | 20230401 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | E | 1025 | P | 5 | 20230217 |
| EPI_ISL_18488763 | NSP3 | hCoV-19/South Korea/KDCA270350/2023 | E | 1025 | D | 300 | 20231012 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | E | 1025 | V | 13 | 20230401 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | E | 1025 | S | 2 | 20240816 |
| EPI_ISL_19702470 | NSP3 | hCoV-19/Canada/ON-PHL-202502996/2025 | E | 1025 | R | 39 | 20250127 |
| EPI_ISL_11581019 | NSP3 | hCoV-19/Slovenia/08-088269-MB/2022 | E | 1025 | Z | 2 | 20220301 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 1025 | stop | 12 | 20230101 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | E | 1025 | F | 2 | 20230401 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | E | 1025 | del | 27 | 20230217 |
| EPI_ISL_11348092 | NSP3 | hCoV-19/Belarus/HM-CRIE-7735754713/2022 | E | 1025 | Y | 1 | 20220103 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | E | 1025 | I | 1 | 20201214 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | E | 1025 | T | 4 | 20221230 |
| EPI_ISL_19751024 | NSP3 | hCoV-19/Spain/MC-HCUVA-20421717/2025 | E | 1025 | A | 22 | 20250110 |
| EPI_ISL_13481060 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-101254/2022 | E | 1025 | insTKstopS | 1 | 20220615 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | E | 1025 | L | 3 | 20220923 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1026 | insstopAWY | 1 | 20230101 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | T | 1026 | R | 1 | 20211115 |
| EPI_ISL_19824947 | NSP3 | hCoV-19/USA/NY-GBW-GKISBBBF37999/2025 | T | 1026 | I | 1704 | 20250331 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | T | 1026 | F | 10 | 20230401 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | T | 1026 | S | 34 | 20230401 |
| EPI_ISL_18825526 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69573163/2024 | T | 1026 | K | 7 | 20240115 |
| EPI_ISL_18370801 | NSP3 | hCoV-19/env/Germany/BY-LGL-6021077/2023 | T | 1026 | del | 85 | 20230925 |
| EPI_ISL_11936224 | NSP3 | hCoV-19/England/DHSC-CYDCSGZ/2021 | T | 1026 | D | 1 | 20211225 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | T | 1026 | V | 7 | 20230401 |
| EPI_ISL_19615773 | NSP3 | hCoV-19/Germany/BW-UKU-3879/2024 | T | 1026 | A | 281 | 20240910 |
| EPI_ISL_19736147 | NSP3 | hCoV-19/Germany/BW-RKI-I-1147693/2025 | T | 1026 | N | 270 | 20250129 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 1026 | L | 2 | 20221226 |
| EPI_ISL_14441098 | NSP3 | hCoV-19/India/OR-ILSGS18766/2022 | T | 1026 | Q | 1 | 20220713 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | T | 1026 | P | 1 | 20210526 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | T | 1026 | G | 2 | 20230209 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | L | 1027 | A | 1 | 20230217 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | L | 1027 | K | 1 | 20220923 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 1027 | R | 3 | 20230104 |
| EPI_ISL_17372608 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2523/2022 | L | 1027 | insGV | 1 | 20221230 |
| EPI_ISL_8806278 | NSP3 | hCoV-19/India/MH-NCCS-2750000421886/2021 | L | 1027 | insNFstopRN | 1 | 20211026 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | L | 1027 | Y | 25 | 20230401 |
| EPI_ISL_4175557 | NSP3 | hCoV-19/USA/ID-IBL-754710/2021 | L | 1027 | C | 1 | 20210901 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | L | 1027 | insTIVVTINIstopLLKK | 1 | 20211231 |
| EPI_ISL_19340489 | NSP3 | hCoV-19/South Korea/KDCA293749/2024 | L | 1027 | stop | 4 | 20240712 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | L | 1027 | T | 8 | 20230217 |
| EPI_ISL_5007138 | NSP3 | hCoV-19/South Korea/KDCA12481/2021 | L | 1027 | M | 2 | 20210818 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | L | 1027 | insS | 1 | 20221206 |
| EPI_ISL_19826769 | NSP3 | hCoV-19/USA/MN-MDH-46632/2025 | L | 1027 | F | 189 | 20250324 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | L | 1027 | insNIstopLLKKLCIAstop | 1 | 20210114 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | L | 1027 | insNIstopLLKK | 11 | 20230401 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1027 | H | 1 | 20201214 |
| EPI_ISL_19645555 | NSP3 | hCoV-19/Sichuan/DZCDC-CX0042/2024 | L | 1027 | S | 11 | 20240213 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1027 | E | 1 | 20210318 |
| EPI_ISL_19544030 | NSP3 | hCoV-19/Canada/BC-BCCDC-747646/2024 | L | 1027 | V | 34 | 20241026 |
| EPI_ISL_11055026 | NSP3 | hCoV-19/India/HP-NCDC-5409226/2021 | L | 1027 | insNFstopRNFVLHR | 2 | 20210826 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 1027 | N | 2 | 20230412 |
| EPI_ISL_14337746 | NSP3 | hCoV-19/USA/GA-CDC-QDX39365746/2022 | L | 1027 | W | 2 | 20220724 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | L | 1027 | insNFstopR | 1 | 20210730 |
| EPI_ISL_18370801 | NSP3 | hCoV-19/env/Germany/BY-LGL-6021077/2023 | L | 1027 | del | 87 | 20230925 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | L | 1027 | P | 2 | 20221012 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | L | 1027 | I | 16 | 20240816 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | Y | 1028 | T | 1 | 20221206 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 1028 | del | 24 | 20240816 |
| EPI_ISL_18816981 | NSP3 | hCoV-19/USA/TX-HMH-M-137537/2024 | Y | 1028 | insLHRR | 18 | 20240107 |
| EPI_ISL_12583976 | NSP3 | hCoV-19/Turkey/HSGM-G8643/2022 | Y | 1028 | stop | 2 | 20220407 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | Y | 1028 | S | 6 | 20230217 |
| EPI_ISL_19464281 | NSP3 | hCoV-19/USA/CA-SC-300069/2024 | Y | 1028 | H | 119 | 20240903 |
| EPI_ISL_18226348 | NSP3 | hCoV-19/env/India/MH-FMR_K4-55a/2023 | Y | 1028 | insYRR | 1 | 20230315 |
| EPI_ISL_14954331 | NSP3 | hCoV-19/USA/TX-HMH-M-114358/2022 | Y | 1028 | insHRR | 9 | 20220831 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Y | 1028 | R | 6 | 20230104 |
| EPI_ISL_4175557 | NSP3 | hCoV-19/USA/ID-IBL-754710/2021 | Y | 1028 | I | 1 | 20210901 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | Y | 1028 | insYRW | 1 | 20211104 |
| EPI_ISL_18370801 | NSP3 | hCoV-19/env/Germany/BY-LGL-6021077/2023 | Y | 1028 | L | 88 | 20230925 |
| EPI_ISL_19825340 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-25C-MM00104R/2025 | Y | 1028 | C | 2989 | 20250325 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Y | 1028 | K | 5 | 20221226 |
| EPI_ISL_19503132 | NSP3 | hCoV-19/USA/IL-RIPHL_15016_G/2024 | Y | 1028 | F | 20 | 20241007 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | Y | 1028 | insRR | 1 | 20230401 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | Y | 1028 | W | 1 | 20230217 |
| EPI_ISL_9698440 | NSP3 | hCoV-19/Germany/NI-IOV-60397518/2022 | Y | 1028 | N | 18 | 20220115 |
| EPI_ISL_18816981 | NSP3 | hCoV-19/USA/TX-HMH-M-137537/2024 | Y | 1028 | V | 25 | 20240107 |
| EPI_ISL_18436053 | NSP3 | hCoV-19/Italy/LOM-69495577/2023 | Y | 1028 | D | 5 | 20231019 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | Y | 1028 | G | 1 | 20230217 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | Y | 1028 | P | 1 | 20210526 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1028 | Q | 1 | 20220210 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | C | 1029 | stop | 2 | 20210802 |
| EPI_ISL_19813452 | NSP3 | hCoV-19/France/ARA-RELAB-HCL725000039601/2025 | C | 1029 | Y | 101 | 20250305 |
| EPI_ISL_14701418 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-17093/2022 | C | 1029 | G | 6 | 20220809 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | C | 1029 | del | 36 | 20240816 |
| EPI_ISL_19130980 | NSP3 | hCoV-19/Thailand/NIC_BKK_P1826/2024 | C | 1029 | S | 483 | 20240401 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | C | 1029 | V | 9 | 20221012 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1029 | M | 1 | 20220210 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | C | 1029 | insIAstop | 1 | 20200814 |
| EPI_ISL_5651028 | NSP3 | hCoV-19/Brazil/SP-IB_121582/2021 | C | 1029 | W | 9 | 20210719 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | C | 1029 | Q | 1 | 20210526 |
| EPI_ISL_19749239 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00022449_01/2024 | C | 1029 | R | 1279 | 20241204 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | C | 1029 | K | 5 | 20230217 |
| EPI_ISL_3923180 | NSP3 | hCoV-19/USA/ID-IBL-646308/2020 | C | 1029 | L | 1 | 20200819 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | C | 1029 | A | 3 | 20230412 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | C | 1029 | T | 4 | 20221226 |
| EPI_ISL_19279702 | NSP3 | hCoV-19/USA/NY-GBW-GKPLAAAA17488/2024 | C | 1029 | F | 230 | 20240713 |
| EPI_ISL_2220360 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-35228/2020 | C | 1029 | P | 1 | 20200810 |
| EPI_ISL_15292699 | NSP3 | hCoV-19/India/MH-NCCS-2750000428789/2021 | C | 1029 | I | 4 | 20211203 |
| EPI_ISL_19080907 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-0390/2024 | I | 1030 | L | 71 | 20240307 |
| EPI_ISL_18546494 | NSP3 | hCoV-19/USA/TX-HMH-M-135144/2023 | I | 1030 | A | 7 | 20231022 |
| EPI_ISL_19608424 | NSP3 | hCoV-19/Germany/BB-RKI-I-1146658/2024 | I | 1030 | V | 348 | 20241125 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | I | 1030 | W | 1 | 20230412 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | I | 1030 | insV | 1 | 20221206 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | I | 1030 | insAstop | 1 | 20210730 |
| EPI_ISL_18816981 | NSP3 | hCoV-19/USA/TX-HMH-M-137537/2024 | I | 1030 | F | 38 | 20240107 |
| EPI_ISL_11355408 | NSP3 | hCoV-19/France/GES-ChNa-210059743501/2021 | I | 1030 | H | 2 | 20210716 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | I | 1030 | del | 35 | 20230401 |
| EPI_ISL_18566496 | NSP3 | hCoV-19/Australia/NSW-ICPMR-51413/2023 | I | 1030 | K | 9 | 20231112 |
| EPI_ISL_17127525 | NSP3 | hCoV-19/USA/IL-CDC-QDX46679000/2023 | I | 1030 | T | 18 | 20230209 |
| EPI_ISL_18899622 | NSP3 | hCoV-19/USA/LA-EVTL21281/2024 | I | 1030 | M | 58 | 20240122 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | I | 1030 | insA | 1 | 20211231 |
| EPI_ISL_18540497 | NSP3 | hCoV-19/Italy/EMR-IZSLER370285-001-01/2023 | I | 1030 | J | 8 | 20231030 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | I | 1030 | stop | 3 | 20211231 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | I | 1030 | N | 1 | 20210526 |
| EPI_ISL_14701418 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-17093/2022 | I | 1030 | R | 5 | 20220809 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | I | 1030 | Y | 1 | 20230217 |
| EPI_ISL_19648563 | NSP3 | hCoV-19/USA/MN-MDH-44668/2024 | D | 1031 | E | 116 | 20241212 |
| EPI_ISL_18546494 | NSP3 | hCoV-19/USA/TX-HMH-M-135144/2023 | D | 1031 | stop | 5 | 20231022 |
| EPI_ISL_17516979 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2013/2023 | D | 1031 | Q | 4 | 20230331 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | D | 1031 | insC | 1 | 20240111 |
| EPI_ISL_18797561 | NSP3 | hCoV-19/USA/MS-MSPHL-0042/2024 | D | 1031 | L | 4 | 20240103 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1031 | I | 1 | 20210318 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | D | 1031 | P | 1 | 20210526 |
| EPI_ISL_19060649 | NSP3 | hCoV-19/Russia/TA-RII-MH173961S/2023 | D | 1031 | V | 2 | 20231130 |
| EPI_ISL_12934296 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1516/2021 | D | 1031 | H | 8 | 20211231 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | D | 1031 | K | 2 | 20230412 |
| EPI_ISL_19826727 | NSP3 | hCoV-19/USA/MN-MDH-46590/2025 | D | 1031 | N | 1426 | 20250327 |
| EPI_ISL_18816981 | NSP3 | hCoV-19/USA/TX-HMH-M-137537/2024 | D | 1031 | T | 39 | 20240107 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | D | 1031 | M | 3 | 20230217 |
| EPI_ISL_19468201 | NSP3 | hCoV-19/Peru/LIM-INS-50261/2024 | D | 1031 | insY | 3 | 20240104 |
| EPI_ISL_19435344 | NSP3 | hCoV-19/Canada/ON-KHS-04444-v1/2024 | D | 1031 | B | 28 | 20240917 |
| EPI_ISL_19499090 | NSP3 | hCoV-19/USA/TX-HMH-M-146468/2024 | D | 1031 | A | 61 | 20240916 |
| EPI_ISL_1023790 | NSP3 | hCoV-19/Brazil/RJ-NIL4PL02/2020 | D | 1031 | S | 1 | 20200810 |
| EPI_ISL_16599465 | NSP3 | hCoV-19/USA/TX-HMH-123498/2023 | D | 1031 | G | 31 | 20230113 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | D | 1031 | insstop | 6 | 20230401 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | D | 1031 | del | 50 | 20230401 |
| EPI_ISL_9698466 | NSP3 | hCoV-19/Germany/NI-IOV-60404340/2022 | D | 1031 | F | 1 | 20220125 |
| EPI_ISL_17057810 | NSP3 | hCoV-19/USA/TX-UTEP-B002501469/2022 | D | 1031 | Y | 13 | 20220118 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | D | 1031 | R | 8 | 20240816 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | G | 1032 | T | 10 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | G | 1032 | K | 2 | 20221226 |
| EPI_ISL_19805436 | NSP3 | hCoV-19/USA/NY-URMC-P3S1U516-1/2025 | G | 1032 | C | 431 | 20250109 |
| EPI_ISL_19817924 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U828-1/2025 | G | 1032 | S | 29 | 20250313 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | G | 1032 | insLVLYFY | 1 | 20210803 |
| EPI_ISL_18816981 | NSP3 | hCoV-19/USA/TX-HMH-M-137537/2024 | G | 1032 | Y | 36 | 20240107 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | G | 1032 | D | 22 | 20230418 |
| EPI_ISL_15416654 | NSP3 | hCoV-19/USA/ID-IBL-856181/2022 | G | 1032 | R | 9 | 20220923 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | G | 1032 | stop | 49 | 20220810 |
| EPI_ISL_18081270 | NSP3 | hCoV-19/env/Germany/BY-LGL-5957859/2023 | G | 1032 | V | 7 | 20230719 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | G | 1032 | F | 1 | 20210802 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | G | 1032 | L | 1 | 20200814 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | G | 1032 | I | 5 | 20230412 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1032 | H | 1 | 20210318 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | G | 1032 | del | 31 | 20230217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | G | 1032 | Q | 1 | 20201214 |
| EPI_ISL_14198785 | NSP3 | hCoV-19/USA/FL-BPHL-11252/2022 | G | 1032 | A | 5 | 20220602 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | G | 1032 | E | 1 | 20210802 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | G | 1032 | N | 6 | 20240111 |
| EPI_ISL_19831273 | NSP3 | hCoV-19/Japan/FR050-0096/2025 | A | 1033 | V | 3929 | 20250402 |
| EPI_ISL_1023790 | NSP3 | hCoV-19/Brazil/RJ-NIL4PL02/2020 | A | 1033 | E | 1 | 20200810 |
| EPI_ISL_12319495 | NSP3 | hCoV-19/Turkey/HSGM-3GS1270/2022 | A | 1033 | insSK | 1 | 20220312 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | A | 1033 | del | 33 | 20230217 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | A | 1033 | F | 2 | 20211231 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | A | 1033 | R | 5 | 20211229 |
| EPI_ISL_19679487 | NSP3 | hCoV-19/USA/SD-SDPHL-3867/2024 | A | 1033 | T | 854 | 20241226 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | A | 1033 | stop | 3 | 20220209 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | A | 1033 | K | 40 | 20240111 |
| EPI_ISL_18226329 | NSP3 | hCoV-19/env/India/MH-FMR_D1-52a/2023 | A | 1033 | L | 6 | 20230302 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | A | 1033 | M | 3 | 20211018 |
| EPI_ISL_3339537 | NSP3 | hCoV-19/USA/NY-PRL-2021_0803_02I11/2021 | A | 1033 | insFK | 1 | 20210727 |
| EPI_ISL_19242469 | NSP3 | hCoV-19/Yunnan/YNCDC-1177/2024 | A | 1033 | D | 328 | 20240521 |
| EPI_ISL_19093495 | NSP3 | hCoV-19/Hong Kong/HKU-240503-059/2024 | A | 1033 | P | 20 | 20240320 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | A | 1033 | W | 1 | 20240816 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | A | 1033 | C | 25 | 20230401 |
| EPI_ISL_1923568 | NSP3 | hCoV-19/USA/FL-CDC-STM-000058453/2021 | A | 1033 | insYT | 1 | 20210416 |
| EPI_ISL_14163438 | NSP3 | hCoV-19/Israel/SMC-7093759/2022 | A | 1033 | insYK | 16 | 20220721 |
| EPI_ISL_19827274 | NSP3 | hCoV-19/Chile/CO-ISPC-23138/2025 | A | 1033 | S | 147 | 20250317 |
| EPI_ISL_18285248 | NSP3 | hCoV-19/Japan/PG-567744/2023 | A | 1033 | G | 7 | 20230901 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1034 | N | 1 | 20201214 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1034 | G | 1 | 20220210 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 1034 | insT | 1 | 20221226 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 1034 | C | 7 | 20221226 |
| EPI_ISL_19819578 | NSP3 | hCoV-19/Australia/SA2501011/2025 | L | 1034 | S | 330 | 20250320 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | L | 1034 | I | 21 | 20240816 |
| EPI_ISL_15003374 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1231/2021 | L | 1034 | stop | 2 | 20210923 |
| EPI_ISL_19459302 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242906/2024 | L | 1034 | F | 82 | 20240717 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | L | 1034 | Y | 18 | 20230401 |
| EPI_ISL_19773172 | NSP3 | hCoV-19/USA/VA-CDC-LC1134424/2025 | L | 1034 | del | 73 | 20250225 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | L | 1034 | V | 301 | 20240111 |
| EPI_ISL_12710439 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-97429/2022 | L | 1034 | Q | 2 | 20220505 |
| EPI_ISL_2993651 | NSP3 | hCoV-19/Germany/NW-HHU-7873/2021 | L | 1034 | insEW | 1 | 20210708 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | L | 1034 | D | 1 | 20210526 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | L | 1034 | W | 1 | 20230217 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 1034 | T | 1 | 20230412 |
| EPI_ISL_7558716 | NSP3 | hCoV-19/England/MILK-2D2EE96/2021 | L | 1034 | J | 1 | 20211204 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | L | 1035 | Q | 1 | 20230418 |
| EPI_ISL_19828728 | NSP3 | hCoV-19/USA/CA-GBW-GKPLAAAA48920/2025 | L | 1035 | F | 16220 | 20250407 |
| EPI_ISL_19756686 | NSP3 | hCoV-19/Australia/QLD0x015225/2025 | L | 1035 | I | 788 | 20250206 |
| EPI_ISL_19773172 | NSP3 | hCoV-19/USA/VA-CDC-LC1134424/2025 | L | 1035 | del | 66 | 20250225 |
| EPI_ISL_19459302 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242906/2024 | L | 1035 | T | 21 | 20240717 |
| EPI_ISL_11355418 | NSP3 | hCoV-19/France/GES-ChNa-210059856201/2021 | L | 1035 | insstopSX | 1 | 20210717 |
| EPI_ISL_12710439 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-97429/2022 | L | 1035 | N | 1 | 20220505 |
| EPI_ISL_18385921 | NSP3 | hCoV-19/USA/NY-Wadsworth-23058424-01/2023 | L | 1035 | R | 42 | 20230930 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | L | 1035 | C | 5 | 20230217 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | L | 1035 | S | 6 | 20230217 |
| EPI_ISL_19510645 | NSP3 | hCoV-19/Cyprus/BMV10611/2023 | L | 1035 | H | 28 | 20230923 |
| EPI_ISL_19389017 | NSP3 | hCoV-19/England/CLIMB-CM7YKIGF/2024 | L | 1035 | P | 27 | 20240725 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | L | 1035 | insY | 1 | 20210816 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | L | 1035 | insstop | 1 | 20220112 |
| EPI_ISL_10944005 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8974/2022 | L | 1035 | M | 1 | 20220209 |
| EPI_ISL_17516979 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2013/2023 | L | 1035 | Y | 6 | 20230331 |
| EPI_ISL_12966107 | NSP3 | hCoV-19/Canada/BC-BCCDC-429902/2022 | L | 1035 | J | 7 | 20220425 |
| EPI_ISL_19598066 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-144308/2024 | L | 1035 | V | 15 | 20241120 |
| EPI_ISL_10944005 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8974/2022 | L | 1035 | insFS | 1 | 20220209 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | T | 1036 | N | 2 | 20230217 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | T | 1036 | V | 2 | 20230412 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | T | 1036 | R | 68 | 20240111 |
| EPI_ISL_1238584 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-28800/2021 | T | 1036 | insFLR | 1 | 20210204 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | T | 1036 | del | 35 | 20240315 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | T | 1036 | Q | 36 | 20230401 |
| EPI_ISL_17516979 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2013/2023 | T | 1036 | L | 12 | 20230331 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 1036 | P | 5 | 20221226 |
| EPI_ISL_19459302 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242906/2024 | T | 1036 | Y | 70 | 20240717 |
| EPI_ISL_19822821 | NSP3 | hCoV-19/Denmark/DCGC-692091/2025 | T | 1036 | K | 108 | 20250317 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | T | 1036 | F | 1 | 20230418 |
| EPI_ISL_8806278 | NSP3 | hCoV-19/India/MH-NCCS-2750000421886/2021 | T | 1036 | insstop | 1 | 20211026 |
| EPI_ISL_19750960 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147738/2025 | T | 1036 | A | 211 | 20250206 |
| EPI_ISL_19773172 | NSP3 | hCoV-19/USA/VA-CDC-LC1134424/2025 | T | 1036 | S | 34 | 20250225 |
| EPI_ISL_12291387 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1121/2022 | T | 1036 | E | 2 | 20220127 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | T | 1036 | insY | 1 | 20210508 |
| EPI_ISL_19826022 | NSP3 | hCoV-19/Singapore/Y25R15MSC95/2025 | T | 1036 | I | 17293 | 20250407 |
| EPI_ISL_13466904 | NSP3 | hCoV-19/USA/WA-UW-22061289370/2022 | T | 1036 | stop | 24 | 20220612 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | T | 1036 | H | 3 | 20220112 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | T | 1036 | insYK | 1 | 20211229 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1036 | C | 2 | 20230101 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1036 | G | 3 | 20240816 |
| EPI_ISL_19782560 | NSP3 | hCoV-19/USA/TN-UM-L3252784798626/2025 | K | 1037 | R | 560 | 20250203 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | K | 1037 | I | 59 | 20240111 |
| EPI_ISL_17559297 | NSP3 | hCoV-19/USA/DC-DFS-PHL-09765/2023 | K | 1037 | M | 38 | 20230404 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | K | 1037 | L | 45 | 20220810 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1037 | C | 1 | 20210318 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | K | 1037 | H | 1 | 20230217 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | K | 1037 | V | 1 | 20210801 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | K | 1037 | del | 32 | 20240315 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1037 | Y | 1 | 20220210 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1037 | T | 249 | 20240816 |
| EPI_ISL_17516993 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2036/2023 | K | 1037 | stop | 5 | 20230331 |
| EPI_ISL_12291387 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1121/2022 | K | 1037 | G | 1 | 20220127 |
| EPI_ISL_17425907 | NSP3 | hCoV-19/India/MH-CSIR-2888/2023 | K | 1037 | S | 24 | 20230401 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | K | 1037 | F | 1 | 20210805 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | K | 1037 | A | 1 | 20230412 |
| EPI_ISL_19455502 | NSP3 | hCoV-19/USA/VA-CDC-LC1122205/2024 | K | 1037 | N | 397 | 20240923 |
| EPI_ISL_19819845 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YEJRT/2025 | K | 1037 | Q | 37 | 20250315 |
| EPI_ISL_19705581 | NSP3 | hCoV-19/USA/CO-CDPHE-42867657/2025 | K | 1037 | E | 286 | 20250117 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | S | 1038 | T | 15 | 20240816 |
| EPI_ISL_17411787 | NSP3 | hCoV-19/USA/OH-CDC-LC1033585/2023 | S | 1038 | C | 24 | 20230322 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | S | 1038 | K | 23 | 20230401 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | S | 1038 | D | 1 | 20230209 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | S | 1038 | V | 8 | 20220112 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | S | 1038 | Q | 107 | 20240111 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | S | 1038 | M | 2 | 20210921 |
| EPI_ISL_19575732 | NSP3 | hCoV-19/Sweden/M-SUS0023863/2024 | S | 1038 | P | 390 | 20241122 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | S | 1038 | L | 4 | 20220209 |
| EPI_ISL_19828635 | NSP3 | hCoV-19/Japan/FR055-0190/2025 | S | 1038 | F | 3027 | 20250316 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1038 | stop | 1 | 20230101 |
| EPI_ISL_19810585 | NSP3 | hCoV-19/USA/KY-KSPHL-0003781/2025 | S | 1038 | Y | 117 | 20250205 |
| EPI_ISL_19609860 | NSP3 | hCoV-19/Canada/AB-ABPHL-127760/2024 | S | 1038 | A | 74 | 20241117 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | S | 1038 | R | 2 | 20211231 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | S | 1038 | del | 34 | 20240315 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | S | 1038 | N | 1 | 20211228 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | S | 1038 | E | 5 | 20230412 |
| EPI_ISL_4530168 | NSP3 | hCoV-19/England/PHEC-3G071GE5/2021 | S | 1038 | I | 1 | 20210919 |
| EPI_ISL_15509755 | NSP3 | hCoV-19/France/IDF-APHPSU_PSL-662208007703/2022 | S | 1038 | insSEK | 1 | 20220801 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | S | 1038 | insH | 1 | 20210803 |
| EPI_ISL_2274015 | NSP3 | hCoV-19/Dominican Republic/21906/2021 | S | 1038 | insAG | 2 | 20210316 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | S | 1039 | R | 59 | 20240111 |
| EPI_ISL_19212704 | NSP3 | hCoV-19/env/India/MH-NCL-32-01_2/2023 | S | 1039 | Q | 44 | 20231201 |
| EPI_ISL_4122697 | NSP3 | hCoV-19/England/PHEC-X308XC2F/2021 | S | 1039 | G | 1 | 20210824 |
| EPI_ISL_19721737 | NSP3 | hCoV-19/USA/WI-WSLH-2500163/2025 | S | 1039 | A | 259 | 20250101 |
| EPI_ISL_19792187 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YMSD5/2025 | S | 1039 | P | 789 | 20250305 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | S | 1039 | V | 5 | 20230412 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 1039 | Y | 1 | 20210318 |
| EPI_ISL_19203255 | NSP3 | hCoV-19/Australia/NSW-ICPMR-54078/2024 | S | 1039 | F | 7 | 20240528 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | S | 1039 | C | 4 | 20220209 |
| EPI_ISL_19760785 | NSP3 | hCoV-19/USA/NM-NMDOH-2025002276/2025 | S | 1039 | T | 76 | 20250102 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | S | 1039 | insR | 1 | 20210801 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | S | 1039 | del | 38 | 20240315 |
| EPI_ISL_4530168 | NSP3 | hCoV-19/England/PHEC-3G071GE5/2021 | S | 1039 | D | 1 | 20210919 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | S | 1039 | N | 5 | 20230418 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | S | 1039 | K | 2 | 20230217 |
| EPI_ISL_19831739 | NSP3 | hCoV-19/Luxembourg/LNS0856652/2025 | S | 1039 | L | 39072 | 20250325 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | S | 1039 | W | 1 | 20230209 |
| EPI_ISL_12845155 | NSP3 | hCoV-19/Bangladesh/BSMMU_Laila_274/2021 | S | 1039 | stop | 2 | 20210726 |
| EPI_ISL_2603423 | NSP3 | hCoV-19/France/ARA-CHUGA-1065843095/2021 | S | 1039 | I | 1 | 20210607 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | E | 1040 | C | 1 | 20201214 |
| EPI_ISL_19586146 | NSP3 | hCoV-19/USA/NY-URMC-P0S1S546-1/2024 | E | 1040 | G | 328 | 20241025 |
| EPI_ISL_2603423 | NSP3 | hCoV-19/France/ARA-CHUGA-1065843095/2021 | E | 1040 | insRS | 1 | 20210607 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1040 | R | 6 | 20220210 |
| EPI_ISL_18436053 | NSP3 | hCoV-19/Italy/LOM-69495577/2023 | E | 1040 | stop | 4 | 20231019 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | E | 1040 | W | 1 | 20230418 |
| EPI_ISL_19523163 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000548101/2024 | E | 1040 | D | 157 | 20241009 |
| EPI_ISL_19783524 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YF4XE/2025 | E | 1040 | K | 500 | 20250303 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | E | 1040 | P | 46 | 20220810 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | E | 1040 | del | 39 | 20240315 |
| EPI_ISL_18227022 | NSP3 | hCoV-19/England/CLIMB-CM7YKXQI/2023 | E | 1040 | Z | 5 | 20230822 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | E | 1040 | insK | 1 | 20230412 |
| EPI_ISL_17538301 | NSP3 | hCoV-19/South Korea/KDCA228172/2023 | E | 1040 | V | 128 | 20230328 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | E | 1040 | Q | 22 | 20230401 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 1040 | H | 2 | 20230101 |
| EPI_ISL_19212704 | NSP3 | hCoV-19/env/India/MH-NCL-32-01_2/2023 | E | 1040 | N | 30 | 20231201 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | E | 1040 | S | 65 | 20240111 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | E | 1040 | F | 3 | 20211231 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | E | 1040 | T | 5 | 20230117 |
| EPI_ISL_19612923 | NSP3 | hCoV-19/Italy/EMR-IZSLER-383280-003-01/2024 | E | 1040 | A | 333 | 20241130 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | E | 1040 | L | 18 | 20230401 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | E | 1040 | Y | 1 | 20211222 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | Y | 1041 | del | 39 | 20240315 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1041 | G | 1 | 20210318 |
| EPI_ISL_19689244 | NSP3 | hCoV-19/USA/CA-PFZ02975/2024 | Y | 1041 | C | 128 | 20241014 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | Y | 1041 | insL | 1 | 20211231 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | Y | 1041 | F | 6 | 20230418 |
| EPI_ISL_19212704 | NSP3 | hCoV-19/env/India/MH-NCL-32-01_2/2023 | Y | 1041 | T | 38 | 20231201 |
| EPI_ISL_19804482 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-20C-MM00057R/2025 | Y | 1041 | H | 2116 | 20250320 |
| EPI_ISL_14701418 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-17093/2022 | Y | 1041 | D | 92 | 20220809 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | Y | 1041 | Q | 46 | 20220810 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | Y | 1041 | M | 1 | 20211115 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | Y | 1041 | W | 2 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 1041 | S | 1 | 20240816 |
| EPI_ISL_17591858 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3214/2023 | Y | 1041 | N | 21 | 20230417 |
| EPI_ISL_10830166 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-89089/2022 | Y | 1041 | stop | 7 | 20220203 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | Y | 1041 | I | 7 | 20220112 |
| EPI_ISL_4050582 | NSP3 | hCoV-19/Thailand/Krabi_SEQ14803/2021 | Y | 1041 | E | 1 | 20210813 |
| EPI_ISL_4175557 | NSP3 | hCoV-19/USA/ID-IBL-754710/2021 | Y | 1041 | insNT | 1 | 20210901 |
| EPI_ISL_18322341 | NSP3 | hCoV-19/USA/TX-HMH-M-133463/2023 | Y | 1041 | L | 3 | 20230906 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | Y | 1041 | K | 2 | 20230117 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1042 | S | 2 | 20230209 |
| EPI_ISL_16936054 | NSP3 | hCoV-19/USA/NY-CDC-QDX46229343/2023 | K | 1042 | I | 16 | 20230129 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | K | 1042 | C | 1 | 20211115 |
| EPI_ISL_18942729 | NSP3 | hCoV-19/USA/CA-CDC-QDX92611282/2024 | K | 1042 | Q | 17 | 20240209 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 1042 | stop | 3 | 20230101 |
| EPI_ISL_19719376 | NSP3 | hCoV-19/USA/RI-RISHL-00207/2025 | K | 1042 | R | 1461 | 20250117 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1042 | F | 2 | 20220210 |
| EPI_ISL_19756636 | NSP3 | hCoV-19/Japan/FR124-0100/2024 | K | 1042 | E | 378 | 20241211 |
| EPI_ISL_19549690 | NSP3 | hCoV-19/Mexico/NLE_IBT_IMSS_13215/2024 | K | 1042 | N | 184 | 20240429 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | K | 1042 | del | 53 | 20240315 |
| EPI_ISL_18985049 | NSP3 | hCoV-19/Argentina/INEI-126566/2024 | K | 1042 | T | 67 | 20240131 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | K | 1042 | Y | 62 | 20240111 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | G | 1043 | K | 16 | 20230412 |
| EPI_ISL_12401757 | NSP3 | hCoV-19/Denmark/DCGC-501918/2022 | G | 1043 | R | 54 | 20220405 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 1043 | L | 3 | 20230101 |
| EPI_ISL_19365871 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-144545/2024 | G | 1043 | S | 57 | 20240807 |
| EPI_ISL_19444206 | NSP3 | hCoV-19/Thailand/NIC_CRI_DAI421/2024 | G | 1043 | A | 62 | 20240716 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | G | 1043 | F | 2 | 20221226 |
| EPI_ISL_18857007 | NSP3 | hCoV-19/USA/IL-RIPHL_21713_G/2023 | G | 1043 | V | 89 | 20231228 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | G | 1043 | Y | 2 | 20230217 |
| EPI_ISL_4122697 | NSP3 | hCoV-19/England/PHEC-X308XC2F/2021 | G | 1043 | H | 1 | 20210824 |
| EPI_ISL_13779316 | NSP3 | hCoV-19/USA/DE-CDC-LC0742906/2022 | G | 1043 | C | 16 | 20220622 |
| EPI_ISL_8688192 | NSP3 | hCoV-19/Spain/AS-262164776/2021 | G | 1043 | D | 2 | 20211026 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | G | 1043 | N | 5 | 20220628 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | G | 1043 | del | 97 | 20240816 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | G | 1043 | T | 5 | 20230104 |
| EPI_ISL_10944005 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8974/2022 | G | 1043 | Q | 4 | 20220209 |
| EPI_ISL_2349002 | NSP3 | hCoV-19/Greece/142/2021 | G | 1043 | insXXXXXXK | 1 | 20210209 |
| EPI_ISL_12771937 | NSP3 | hCoV-19/Russia/LIP-CRIE-7728244554/2022 | P | 1044 | R | 26 | 20220207 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | P | 1044 | D | 1 | 20210526 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | P | 1044 | V | 14 | 20230401 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | P | 1044 | Q | 2 | 20230209 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | P | 1044 | insQ | 2 | 20211231 |
| EPI_ISL_19800147 | NSP3 | hCoV-19/USA/IA-SHL-2602345/2025 | P | 1044 | L | 5921 | 20250323 |
| EPI_ISL_8688192 | NSP3 | hCoV-19/Spain/AS-262164776/2021 | P | 1044 | stop | 1 | 20211026 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | P | 1044 | insQVNG | 1 | 20230217 |
| EPI_ISL_14898721 | NSP3 | hCoV-19/USA/MI-CDC-STM-QBP3P73T2/2022 | P | 1044 | J | 2 | 20220829 |
| EPI_ISL_2725115 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-16302/2021 | P | 1044 | A | 2 | 20210616 |
| EPI_ISL_19745817 | NSP3 | hCoV-19/USA/NY-SUNYQB-X967898/2025 | P | 1044 | T | 304 | 20250201 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | P | 1044 | N | 2 | 20221204 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1044 | I | 1 | 20220210 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 1044 | del | 102 | 20240816 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | P | 1044 | C | 58 | 20240111 |
| EPI_ISL_19827962 | NSP3 | hCoV-19/USA/CA-CDPH-500146128/2025 | P | 1044 | H | 510 | 20250202 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | P | 1044 | K | 3 | 20220602 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | P | 1044 | Y | 1 | 20220119 |
| EPI_ISL_19594113 | NSP3 | hCoV-19/South Korea/GJ-HERI-K0526/2024 | P | 1044 | F | 3 | 20240213 |
| EPI_ISL_19829095 | NSP3 | hCoV-19/USA/PA-CDC-LC1136751/2025 | P | 1044 | S | 7764 | 20250331 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1044 | E | 1 | 20210318 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | I | 1045 | P | 1 | 20220628 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | I | 1045 | G | 1 | 20201214 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | I | 1045 | S | 4 | 20230209 |
| EPI_ISL_19786289 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56548/2025 | I | 1045 | V | 1399 | 20250302 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | I | 1045 | L | 50 | 20230412 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | I | 1045 | Y | 8 | 20221204 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | I | 1045 | del | 94 | 20240315 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | I | 1045 | F | 59 | 20240111 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | I | 1045 | K | 4 | 20230217 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | I | 1045 | stop | 3 | 20211018 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | I | 1045 | C | 1 | 20230418 |
| EPI_ISL_12319871 | NSP3 | hCoV-19/Turkey/HSGM-GS1420/2022 | I | 1045 | M | 7 | 20220401 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | I | 1045 | T | 7 | 20240816 |
| EPI_ISL_10858541 | NSP3 | hCoV-19/Turkey/HSGM-G2470/2022 | I | 1045 | N | 7 | 20220217 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | I | 1045 | Q | 1 | 20210801 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | I | 1045 | E | 1 | 20221226 |
| EPI_ISL_9369869 | NSP3 | hCoV-19/England/BRBR-344F615/2022 | I | 1045 | J | 2 | 20220126 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1046 | Q | 4 | 20240816 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | T | 1046 | insstop | 3 | 20220209 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | T | 1046 | N | 4 | 20211018 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 1046 | K | 5 | 20230104 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | T | 1046 | G | 1 | 20220119 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 1046 | Y | 6 | 20221226 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | T | 1046 | V | 2 | 20230418 |
| EPI_ISL_11023716 | NSP3 | hCoV-19/Turkey/HSGM-G2279/2022 | T | 1046 | S | 6 | 20220217 |
| EPI_ISL_19672135 | NSP3 | hCoV-19/France/NAQ-RELAB-HCL725000001301/2024 | T | 1046 | A | 160 | 20241227 |
| EPI_ISL_17425886 | NSP3 | hCoV-19/India/MH-CSIR-2906/2023 | T | 1046 | insL | 1 | 20230401 |
| EPI_ISL_10757962 | NSP3 | hCoV-19/France/IDF-HMN-22022220379/2021 | T | 1046 | P | 1 | 20211220 |
| EPI_ISL_17294398 | NSP3 | hCoV-19/South Korea/KDCA221668/2023 | T | 1046 | M | 17 | 20230303 |
| EPI_ISL_1703644 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-136/2021 | T | 1046 | F | 1 | 20210217 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | T | 1046 | C | 1 | 20210803 |
| EPI_ISL_8949460 | NSP3 | hCoV-19/USA/TX-CDC-ASC210500834/2021 | T | 1046 | R | 5 | 20211230 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | T | 1046 | del | 48 | 20230401 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | T | 1046 | L | 80 | 20240111 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1046 | W | 2 | 20230101 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | D | 1047 | A | 6 | 20230412 |
| EPI_ISL_19702413 | NSP3 | hCoV-19/Canada/ON-PHL-202502922/2025 | D | 1047 | N | 220 | 20250124 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | D | 1047 | T | 1 | 20230418 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | D | 1047 | L | 5 | 20220602 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | D | 1047 | del | 51 | 20240211 |
| EPI_ISL_17372556 | NSP3 | hCoV-19/India/TN-SPHL-2839/2023 | D | 1047 | V | 3 | 20230303 |
| EPI_ISL_12911118 | NSP3 | hCoV-19/USA/VT-CDCBI-CRSP_CYNMSERTRQT5UMAX/2022 | D | 1047 | E | 16 | 20220512 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | D | 1047 | R | 15 | 20230401 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | D | 1047 | S | 5 | 20240816 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | D | 1047 | P | 3 | 20230104 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | D | 1047 | K | 45 | 20220810 |
| EPI_ISL_16577047 | NSP3 | hCoV-19/Japan/TKYkbm72726/2022 | D | 1047 | B | 7 | 20221213 |
| EPI_ISL_19325837 | NSP3 | hCoV-19/env/Hubei/WIV-T726/2023 | D | 1047 | Y | 9 | 20230726 |
| EPI_ISL_14097850 | NSP3 | hCoV-19/India/HP-INSACOG-NII-1241/2022 | D | 1047 | G | 10 | 20220712 |
| EPI_ISL_11610926 | NSP3 | hCoV-19/dog/Switzerland/SH-UZH-P1841_USZ32_T_1/2021 | D | 1047 | H | 2 | 20211211 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | D | 1047 | C | 3 | 20221204 |
| EPI_ISL_12582717 | NSP3 | hCoV-19/Turkey/HSGM-G8459/2022 | D | 1047 | stop | 2 | 20220401 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | D | 1047 | M | 7 | 20211220 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | D | 1047 | Q | 64 | 20240315 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1048 | insstop | 1 | 20230101 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | V | 1048 | T | 3 | 20220119 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | V | 1048 | Y | 3 | 20230217 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | V | 1048 | M | 16 | 20230401 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | V | 1048 | H | 1 | 20210526 |
| EPI_ISL_8318981 | NSP3 | hCoV-19/USA/ID-IBL-778528/2021 | V | 1048 | C | 9 | 20211222 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | V | 1048 | L | 8 | 20240816 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | V | 1048 | S | 1 | 20210805 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | V | 1048 | R | 59 | 20240111 |
| EPI_ISL_16542220 | NSP3 | hCoV-19/USA/TX-HMH-M-122281/2023 | V | 1048 | F | 17 | 20230103 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | V | 1048 | G | 6 | 20230412 |
| EPI_ISL_12319495 | NSP3 | hCoV-19/Turkey/HSGM-3GS1270/2022 | V | 1048 | K | 1 | 20220312 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | V | 1048 | Q | 1 | 20210921 |
| EPI_ISL_19742275 | NSP3 | hCoV-19/South Korea/KDCA296916/2025 | V | 1048 | A | 23 | 20250115 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | V | 1048 | insGIE | 1 | 20230209 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | V | 1048 | N | 2 | 20230217 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | V | 1048 | W | 1 | 20211228 |
| EPI_ISL_12753405 | NSP3 | hCoV-19/Russia/LIP-CRIE-7728247191/2022 | V | 1048 | D | 3 | 20220207 |
| EPI_ISL_19784812 | NSP3 | hCoV-19/Spain/CT-HUGTiP-C1R206/2025 | V | 1048 | I | 839 | 20250307 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | V | 1048 | del | 45 | 20240211 |
| EPI_ISL_19602891 | NSP3 | hCoV-19/Denmark/DCGC-691035/2024 | F | 1049 | V | 19 | 20241125 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | F | 1049 | del | 46 | 20240211 |
| EPI_ISL_19143502 | NSP3 | hCoV-19/Pakistan/GRH42588/2024 | F | 1049 | stop | 2 | 20240315 |
| EPI_ISL_19457669 | NSP3 | hCoV-19/Canada/ON-PHL-202415375/2024 | F | 1049 | C | 57 | 20240923 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | F | 1049 | K | 58 | 20240111 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | F | 1049 | D | 1 | 20230412 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | F | 1049 | L | 281 | 20240816 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | F | 1049 | S | 24 | 20230217 |
| EPI_ISL_19384023 | NSP3 | hCoV-19/Japan/FR066-0146/2024 | F | 1049 | Y | 8 | 20240718 |
| EPI_ISL_18796938 | NSP3 | hCoV-19/USA/MN-MDH-39959/2024 | F | 1049 | I | 71 | 20240104 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | F | 1049 | T | 3 | 20230104 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | F | 1049 | H | 2 | 20221204 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | F | 1049 | E | 1 | 20220628 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1049 | W | 3 | 20220210 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | F | 1049 | P | 2 | 20210921 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | F | 1049 | M | 3 | 20220602 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | F | 1049 | N | 1 | 20210526 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | F | 1049 | insS | 1 | 20200803 |
| EPI_ISL_13054658 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-98069/2022 | Y | 1050 | stop | 10 | 20220521 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1050 | E | 1 | 20220210 |
| EPI_ISL_17516979 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2013/2023 | Y | 1050 | S | 15 | 20230331 |
| EPI_ISL_18450962 | NSP3 | hCoV-19/env/Germany/BY-LGL-6016188/2023 | Y | 1050 | L | 107 | 20231009 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 1050 | I | 7 | 20240816 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | Y | 1050 | insK | 1 | 20230217 |
| EPI_ISL_14495190 | NSP3 | hCoV-19/Japan/RIMD12369/2022 | Y | 1050 | C | 7 | 20220707 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | Y | 1050 | Q | 57 | 20240111 |
| EPI_ISL_13114823 | NSP3 | hCoV-19/USA/TX-HMH-M-98548/2022 | Y | 1050 | T | 20 | 20220525 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | Y | 1050 | F | 16 | 20240627 |
| EPI_ISL_19459311 | NSP3 | hCoV-19/India/MH-ICMR-NIV-243321/2024 | Y | 1050 | del | 47 | 20240809 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | Y | 1050 | M | 2 | 20210806 |
| EPI_ISL_4050582 | NSP3 | hCoV-19/Thailand/Krabi_SEQ14803/2021 | Y | 1050 | A | 1 | 20210813 |
| EPI_ISL_18539824 | NSP3 | hCoV-19/South Korea/KDCA273269/2023 | Y | 1050 | D | 7 | 20231027 |
| EPI_ISL_19443806 | NSP3 | hCoV-19/Denmark/DCGC-688774/2024 | Y | 1050 | H | 166 | 20240902 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | Y | 1050 | W | 1 | 20230217 |
| EPI_ISL_9973618 | NSP3 | hCoV-19/France/GES-HMN-22012260796/2022 | Y | 1050 | B | 1 | 20220124 |
| EPI_ISL_18371175 | NSP3 | hCoV-19/Turkey/HSGM-AA00623/2023 | Y | 1050 | N | 17 | 20230913 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | Y | 1050 | insVWstop | 1 | 20210525 |
| EPI_ISL_9959964 | NSP3 | hCoV-19/France/IDF-HMN-22012250922/2022 | Y | 1050 | K | 1 | 20220124 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | K | 1051 | A | 2 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1051 | V | 5 | 20240816 |
| EPI_ISL_18935631 | NSP3 | hCoV-19/USA/VA-VCUVAS3-EAWT188534/2024 | K | 1051 | L | 57 | 20240111 |
| EPI_ISL_18450962 | NSP3 | hCoV-19/env/Germany/BY-LGL-6016188/2023 | K | 1051 | Q | 68 | 20231009 |
| EPI_ISL_19590977 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000619301/2024 | K | 1051 | I | 18 | 20241113 |
| EPI_ISL_1167186 | NSP3 | hCoV-19/Egypt/MASRI-C5-003/2020 | K | 1051 | Y | 1 | 20200525 |
| EPI_ISL_17516979 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2013/2023 | K | 1051 | T | 37 | 20230331 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1051 | insRG | 1 | 20230209 |
| EPI_ISL_19422577 | NSP3 | hCoV-19/USA/AZ-ASPHL-1603/2024 | K | 1051 | E | 100 | 20240813 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1051 | G | 1 | 20210318 |
| EPI_ISL_19811173 | NSP3 | hCoV-19/Brazil/RN-LACENRN-241118539/2024 | K | 1051 | R | 1261 | 20241230 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1051 | M | 1 | 20201214 |
| EPI_ISL_19691310 | NSP3 | hCoV-19/env/Germany/BY-LGL-6469107/2024 | K | 1051 | insRKQL | 52 | 20241118 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | K | 1051 | insMF | 40 | 20220810 |
| EPI_ISL_19459311 | NSP3 | hCoV-19/India/MH-ICMR-NIV-243321/2024 | K | 1051 | del | 47 | 20240809 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | K | 1051 | C | 1 | 20230412 |
| EPI_ISL_19799789 | NSP3 | hCoV-19/USA/TX-HMH-M-147144/2024 | K | 1051 | insXKQL | 3 | 20241225 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | K | 1051 | insL | 2 | 20210806 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | K | 1051 | F | 1 | 20210805 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | K | 1051 | H | 1 | 20220628 |
| EPI_ISL_17790765 | NSP3 | hCoV-19/Singapore/R37MR96/2023 | K | 1051 | N | 75 | 20230529 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | K | 1051 | S | 3 | 20220602 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | K | 1051 | stop | 1 | 20200721 |
| EPI_ISL_11887839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0814/2022 | E | 1052 | stop | 3 | 20220122 |
| EPI_ISL_18226351 | NSP3 | hCoV-19/env/India/MH-FMR_K5-52a/2023 | E | 1052 | insQLH | 5 | 20230302 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | E | 1052 | Y | 1 | 20230412 |
| EPI_ISL_19366282 | NSP3 | hCoV-19/USA/TX-HMH-M-144853/2024 | E | 1052 | K | 69 | 20240815 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | E | 1052 | T | 4 | 20220602 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | E | 1052 | M | 4 | 20220227 |
| EPI_ISL_4440095 | NSP3 | hCoV-19/Ukraine/65-62523/2021 | E | 1052 | insXX | 1 | 20210617 |
| EPI_ISL_17427517 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2882/2023 | E | 1052 | Q | 3 | 20230401 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | E | 1052 | del | 53 | 20240211 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | E | 1052 | S | 45 | 20230401 |
| EPI_ISL_19573398 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-20K-MM00109R/2024 | E | 1052 | D | 156 | 20241120 |
| EPI_ISL_16739177 | NSP3 | hCoV-19/Israel/CVL-9009185/2023 | E | 1052 | Z | 3 | 20230118 |
| EPI_ISL_10834169 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82885/2022 | E | 1052 | insKXLH | 1 | 20220118 |
| EPI_ISL_18560867 | NSP3 | hCoV-19/France/OCC-CHU-TLS-2331812831/2023 | E | 1052 | G | 77 | 20231114 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | E | 1052 | N | 2 | 20240816 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | E | 1052 | insLLI | 1 | 20210921 |
| EPI_ISL_13114295 | NSP3 | hCoV-19/USA/TX-HMH-M-98446/2022 | E | 1052 | insEQLH | 1 | 20220524 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | E | 1052 | I | 1 | 20210716 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | E | 1052 | R | 18 | 20230401 |
| EPI_ISL_19799789 | NSP3 | hCoV-19/USA/TX-HMH-M-147144/2024 | E | 1052 | H | 116 | 20241225 |
| EPI_ISL_18364841 | NSP3 | hCoV-19/USA/LA-EVTL19950/2023 | E | 1052 | V | 4 | 20230828 |
| EPI_ISL_18385484 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482893/2023 | E | 1052 | A | 17 | 20231004 |
| EPI_ISL_19188560 | NSP3 | hCoV-19/USA/TX-HMH-M-141013/2024 | E | 1052 | insKQLH | 14 | 20240507 |
| EPI_ISL_19424387 | NSP3 | hCoV-19/Japan/FR030-0071/2024 | N | 1053 | B | 14 | 20240323 |
| EPI_ISL_19366282 | NSP3 | hCoV-19/USA/TX-HMH-M-144853/2024 | N | 1053 | del | 64 | 20240815 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | N | 1053 | L | 3 | 20230412 |
| EPI_ISL_19826774 | NSP3 | hCoV-19/USA/MN-MDH-46637/2025 | N | 1053 | S | 2141 | 20250310 |
| EPI_ISL_19784265 | NSP3 | hCoV-19/USA/FL-GBW-GKPLAAAA49908/2025 | N | 1053 | D | 218 | 20250304 |
| EPI_ISL_18255299 | NSP3 | hCoV-19/Israel/ICH-741198878/2023 | N | 1053 | Y | 15 | 20230904 |
| EPI_ISL_19348134 | NSP3 | hCoV-19/Japan/FR043-0040/2024 | N | 1053 | T | 149 | 20240316 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | N | 1053 | F | 4 | 20220227 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | N | 1053 | C | 1 | 20211228 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | N | 1053 | E | 2 | 20230217 |
| EPI_ISL_15513300 | NSP3 | hCoV-19/Chile/RM-117569/2022 | N | 1053 | insXXXXXXXXXXXXXXXXXXX | 1 | 20221009 |
| EPI_ISL_19334636 | NSP3 | hCoV-19/Egypt/CPHL-EGY24160/2024 | N | 1053 | I | 6 | 20240625 |
| EPI_ISL_3470068 | NSP3 | hCoV-19/England/PLYM-1B83122/2021 | N | 1053 | R | 2 | 20210812 |
| EPI_ISL_19214137 | NSP3 | hCoV-19/Puerto Rico/S-6884/2024 | N | 1053 | H | 34 | 20240528 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | N | 1053 | G | 2 | 20220628 |
| EPI_ISL_19665674 | NSP3 | hCoV-19/Canada/QC-L00830217001/2025 | N | 1053 | K | 216 | 20250105 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | N | 1053 | stop | 1 | 20211220 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | N | 1053 | P | 1 | 20210526 |
| EPI_ISL_19411182 | NSP3 | hCoV-19/Canary Islands/HUGCDN-04460972/2024 | S | 1054 | R | 131 | 20240731 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | S | 1054 | V | 9 | 20220104 |
| EPI_ISL_2376771 | NSP3 | hCoV-19/Greece/196568/2021 | S | 1054 | E | 2 | 20210503 |
| EPI_ISL_19663077 | NSP3 | hCoV-19/Canada/ON-PHL-202500675/2025 | S | 1054 | G | 256 | 20250105 |
| EPI_ISL_8024806 | NSP3 | hCoV-19/USA/IL-CDC-LC0427401/2021 | S | 1054 | Y | 1 | 20211204 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | S | 1054 | D | 1 | 20210526 |
| EPI_ISL_19629474 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422196707/2024 | S | 1054 | T | 65 | 20241031 |
| EPI_ISL_19325803 | NSP3 | hCoV-19/Uganda/UVRI_469972/2024 | S | 1054 | Q | 16 | 20240325 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | S | 1054 | W | 5 | 20211018 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 1054 | L | 1 | 20210318 |
| EPI_ISL_19366282 | NSP3 | hCoV-19/USA/TX-HMH-M-144853/2024 | S | 1054 | del | 67 | 20240815 |
| EPI_ISL_18948616 | NSP3 | hCoV-19/South Korea/KDCA286272/2024 | S | 1054 | I | 575 | 20240205 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | S | 1054 | A | 1 | 20240816 |
| EPI_ISL_19823507 | NSP3 | hCoV-19/Spain/GA-CHUAC-13132/2025 | S | 1054 | N | 2904 | 20250324 |
| EPI_ISL_17275368 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45894/2023 | S | 1054 | P | 1 | 20230213 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | S | 1054 | K | 46 | 20230401 |
| EPI_ISL_5236566 | NSP3 | hCoV-19/USA/IA-CDC-ASC210084445/2021 | S | 1054 | H | 1 | 20210911 |
| EPI_ISL_17084297 | NSP3 | hCoV-19/Poland/Kce-245/2023 | S | 1054 | insQF | 1 | 20230224 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | S | 1054 | insC | 1 | 20230217 |
| EPI_ISL_19244976 | NSP3 | hCoV-19/USA/DC-CDC-2-7858269/2024 | S | 1054 | C | 57 | 20240323 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | Y | 1055 | P | 1 | 20210804 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | Y | 1055 | I | 1 | 20210526 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | Y | 1055 | M | 4 | 20211018 |
| EPI_ISL_19130192 | NSP3 | hCoV-19/South Korea/KDCA292341/2024 | Y | 1055 | F | 9 | 20240415 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1055 | E | 1 | 20210318 |
| EPI_ISL_19325803 | NSP3 | hCoV-19/Uganda/UVRI_469972/2024 | Y | 1055 | L | 18 | 20240325 |
| EPI_ISL_9526961 | NSP3 | hCoV-19/USA/MN-CDC-ASC210599641/2022 | Y | 1055 | N | 3 | 20220114 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | Y | 1055 | K | 43 | 20230401 |
| EPI_ISL_19366282 | NSP3 | hCoV-19/USA/TX-HMH-M-144853/2024 | Y | 1055 | del | 75 | 20240815 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | Y | 1055 | S | 2 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 1055 | T | 6 | 20240816 |
| EPI_ISL_15175302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-38265/2022 | Y | 1055 | insT | 2 | 20220725 |
| EPI_ISL_19429495 | NSP3 | hCoV-19/Haiti/LNSP-97240084/2024 | Y | 1055 | C | 4 | 20240523 |
| EPI_ISL_17500720 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13778/2023 | Y | 1055 | stop | 3 | 20230321 |
| EPI_ISL_17516979 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2013/2023 | Y | 1055 | V | 13 | 20230331 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | Y | 1055 | R | 1 | 20230418 |
| EPI_ISL_19799789 | NSP3 | hCoV-19/USA/TX-HMH-M-147144/2024 | Y | 1055 | H | 182 | 20241225 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | T | 1056 | P | 1 | 20210121 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | T | 1056 | Y | 3 | 20230217 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | T | 1056 | D | 1 | 20230217 |
| EPI_ISL_2349002 | NSP3 | hCoV-19/Greece/142/2021 | T | 1056 | C | 1 | 20210209 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 1056 | insQQ | 1 | 20210801 |
| EPI_ISL_13477236 | NSP3 | hCoV-19/USA/CA-SCPHL-22WGS01368/2022 | T | 1056 | R | 3 | 20220524 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | T | 1056 | F | 1 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1056 | N | 3 | 20240816 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | T | 1056 | L | 3 | 20230217 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | T | 1056 | E | 1 | 20210526 |
| EPI_ISL_19325803 | NSP3 | hCoV-19/Uganda/UVRI_469972/2024 | T | 1056 | H | 16 | 20240325 |
| EPI_ISL_19782097 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10818/2025 | T | 1056 | A | 278 | 20250224 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | T | 1056 | G | 1 | 20211228 |
| EPI_ISL_19799789 | NSP3 | hCoV-19/USA/TX-HMH-M-147144/2024 | T | 1056 | K | 326 | 20241225 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | T | 1056 | Q | 8 | 20230418 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | T | 1056 | V | 5 | 20220228 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | T | 1056 | del | 35 | 20240211 |
| EPI_ISL_16839933 | NSP3 | hCoV-19/Canada/ON-PHL-23-08422/2023 | T | 1056 | S | 8 | 20230125 |
| EPI_ISL_19804467 | NSP3 | hCoV-19/USA/VA-VCUVAS3-YQCT311205/2025 | T | 1056 | I | 6895 | 20250315 |
| EPI_ISL_17408873 | NSP3 | hCoV-19/Australia/NSW-ICPMR-44370/2023 | T | 1057 | I | 25 | 20230322 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | T | 1057 | stop | 1 | 20220628 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 1057 | M | 1 | 20210801 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | T | 1057 | D | 1 | 20211228 |
| EPI_ISL_15293838 | NSP3 | hCoV-19/India/MH-NCCS-2512210098/2021 | T | 1057 | Q | 6 | 20211226 |
| EPI_ISL_3922822 | NSP3 | hCoV-19/USA/ID-IBL-638515/2020 | T | 1057 | insR | 1 | 20200801 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | T | 1057 | L | 4 | 20211018 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | T | 1057 | C | 2 | 20220628 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | T | 1057 | K | 4 | 20230217 |
| EPI_ISL_9526961 | NSP3 | hCoV-19/USA/MN-CDC-ASC210599641/2022 | T | 1057 | P | 1 | 20220114 |
| EPI_ISL_18225340 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00011746/2023 | T | 1057 | S | 7 | 20230625 |
| EPI_ISL_19364865 | NSP3 | hCoV-19/Canada/SK-RRPL-727545/2024 | T | 1057 | A | 38 | 20240724 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | T | 1057 | E | 1 | 20230418 |
| EPI_ISL_19325803 | NSP3 | hCoV-19/Uganda/UVRI_469972/2024 | T | 1057 | N | 14 | 20240325 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1057 | V | 84 | 20240816 |
| EPI_ISL_17592043 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3003/2023 | T | 1057 | insN | 1 | 20230406 |
| EPI_ISL_2376771 | NSP3 | hCoV-19/Greece/196568/2021 | T | 1057 | G | 2 | 20210503 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | T | 1057 | del | 30 | 20240211 |
| EPI_ISL_17275368 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45894/2023 | T | 1057 | F | 1 | 20230213 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | T | 1057 | Y | 2 | 20230209 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | T | 1058 | del | 37 | 20240211 |
| EPI_ISL_19799789 | NSP3 | hCoV-19/USA/TX-HMH-M-147144/2024 | T | 1058 | S | 146 | 20241225 |
| EPI_ISL_15293838 | NSP3 | hCoV-19/India/MH-NCCS-2512210098/2021 | T | 1058 | Q | 3 | 20211226 |
| EPI_ISL_17275368 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45894/2023 | T | 1058 | H | 1 | 20230213 |
| EPI_ISL_3923180 | NSP3 | hCoV-19/USA/ID-IBL-646308/2020 | T | 1058 | K | 1 | 20200819 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | T | 1058 | E | 3 | 20230217 |
| EPI_ISL_19496076 | NSP3 | hCoV-19/env/Germany/BY-LGL-6354371/2024 | T | 1058 | P | 16 | 20240930 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1058 | F | 5 | 20240816 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | T | 1058 | C | 1 | 20210526 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | T | 1058 | V | 1 | 20220628 |
| EPI_ISL_19788922 | NSP3 | hCoV-19/Spain/PV-HUD-97216962/2025 | T | 1058 | N | 782 | 20250317 |
| EPI_ISL_19771456 | NSP3 | hCoV-19/USA/SC-SCDHEC-0009/2025 | T | 1058 | I | 1256 | 20250206 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | T | 1058 | L | 4 | 20230217 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | T | 1058 | insT | 1 | 20230217 |
| EPI_ISL_19781060 | NSP3 | hCoV-19/Japan/FR064-0006/2025 | T | 1058 | insK | 33 | 20250218 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | T | 1058 | insPstopNQLLINWMVLF | 1 | 20210825 |
| EPI_ISL_19598455 | NSP3 | hCoV-19/Canada/ON-PHL-202423393/2024 | T | 1058 | A | 434 | 20241127 |
| EPI_ISL_12094594 | NSP3 | hCoV-19/Israel/CVL-26870/2022 | I | 1059 | J | 1 | 20220306 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | I | 1059 | del | 47 | 20240211 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | I | 1059 | Y | 4 | 20220721 |
| EPI_ISL_16039435 | NSP3 | hCoV-19/Peru/LOR-INS-34237/2022 | I | 1059 | R | 8 | 20221107 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1059 | D | 1 | 20220210 |
| EPI_ISL_19325803 | NSP3 | hCoV-19/Uganda/UVRI_469972/2024 | I | 1059 | H | 15 | 20240325 |
| EPI_ISL_19366282 | NSP3 | hCoV-19/USA/TX-HMH-M-144853/2024 | I | 1059 | Q | 82 | 20240815 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | I | 1059 | insTQQPstop | 1 | 20210802 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | I | 1059 | S | 5 | 20230209 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | I | 1059 | A | 1 | 20230217 |
| EPI_ISL_8974136 | NSP3 | hCoV-19/env/Yunnan/PCS8164/2021 | I | 1059 | N | 1 | 20210816 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | I | 1059 | stop | 1 | 20210804 |
| EPI_ISL_19620659 | NSP3 | hCoV-19/Canada/ON-PHL-202424369/2024 | I | 1059 | M | 70 | 20241207 |
| EPI_ISL_19819665 | NSP3 | hCoV-19/Singapore/Y25R14MSC69/2025 | I | 1059 | V | 469 | 20250401 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | I | 1059 | G | 1 | 20220628 |
| EPI_ISL_19781060 | NSP3 | hCoV-19/Japan/FR064-0006/2025 | I | 1059 | L | 102 | 20250218 |
| EPI_ISL_15293838 | NSP3 | hCoV-19/India/MH-NCCS-2512210098/2021 | I | 1059 | P | 3 | 20211226 |
| EPI_ISL_19538386 | NSP3 | hCoV-19/Canada/ON-PHL-202420322/2024 | I | 1059 | K | 37 | 20241030 |
| EPI_ISL_19752763 | NSP3 | hCoV-19/Brazil/AM-IEC-002269/2025 | I | 1059 | T | 499 | 20250108 |
| EPI_ISL_15031494 | NSP3 | hCoV-19/Australia/QLD0x01133A/2022 | K | 1060 | I | 4 | 20220913 |
| EPI_ISL_17275368 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45894/2023 | K | 1060 | insGEVI | 1 | 20230213 |
| EPI_ISL_19639313 | NSP3 | hCoV-19/USA/NY-NYULH-21605/2024 | K | 1060 | E | 51 | 20241204 |
| EPI_ISL_19826784 | NSP3 | hCoV-19/USA/MN-MDH-46647/2025 | K | 1060 | R | 321 | 20250320 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | K | 1060 | D | 4 | 20230217 |
| EPI_ISL_19366282 | NSP3 | hCoV-19/USA/TX-HMH-M-144853/2024 | K | 1060 | Q | 98 | 20240815 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | K | 1060 | insNQLLINW | 1 | 20200803 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | K | 1060 | Y | 1 | 20211228 |
| EPI_ISL_19514410 | NSP3 | hCoV-19/Canada/NS-NSH-740907/2024 | K | 1060 | T | 24 | 20241011 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | K | 1060 | S | 2 | 20230217 |
| EPI_ISL_16762261 | NSP3 | hCoV-19/USA/TX-HMH-M-124253/2023 | K | 1060 | stop | 4 | 20230123 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | K | 1060 | W | 2 | 20220628 |
| EPI_ISL_19304947 | NSP3 | hCoV-19/South Korea/KDCA293729/2024 | K | 1060 | N | 27 | 20240711 |
| EPI_ISL_11355418 | NSP3 | hCoV-19/France/GES-ChNa-210059856201/2021 | K | 1060 | L | 2 | 20210717 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | K | 1060 | V | 1 | 20210526 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1060 | M | 1 | 20201214 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | K | 1060 | del | 59 | 20240211 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 1060 | P | 3 | 20221012 |
| EPI_ISL_11355418 | NSP3 | hCoV-19/France/GES-ChNa-210059856201/2021 | P | 1061 | stop | 2 | 20210717 |
| EPI_ISL_2376771 | NSP3 | hCoV-19/Greece/196568/2021 | P | 1061 | D | 3 | 20210503 |
| EPI_ISL_19572789 | NSP3 | hCoV-19/Spain/AS-HUCA-232485417/2024 | P | 1061 | Q | 9 | 20241118 |
| EPI_ISL_12918864 | NSP3 | hCoV-19/Japan/0419-59048/2022 | P | 1061 | I | 2 | 20220419 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | P | 1061 | insstopNQLLINWMVL | 1 | 20220729 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | P | 1061 | insstopK | 1 | 20210805 |
| EPI_ISL_19325803 | NSP3 | hCoV-19/Uganda/UVRI_469972/2024 | P | 1061 | del | 78 | 20240325 |
| EPI_ISL_19573233 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBF30897/2024 | P | 1061 | T | 168 | 20241120 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 1061 | V | 2 | 20240816 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | P | 1061 | Y | 1 | 20201214 |
| EPI_ISL_19660482 | NSP3 | hCoV-19/USA/CA-CDPH-500139505/2024 | P | 1061 | A | 17 | 20240622 |
| EPI_ISL_19686127 | NSP3 | hCoV-19/USA/AZ-UM-G25X78Y9/2024 | P | 1061 | L | 523 | 20241120 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | P | 1061 | C | 1 | 20220628 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | P | 1061 | N | 1 | 20210916 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | P | 1061 | M | 1 | 20200803 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | P | 1061 | G | 1 | 20210526 |
| EPI_ISL_19390807 | NSP3 | hCoV-19/Puerto Rico/CVL025599/2024 | P | 1061 | S | 301 | 20240711 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | P | 1061 | E | 6 | 20230217 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | P | 1061 | R | 2 | 20220228 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1061 | K | 6 | 20220210 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | V | 1062 | D | 3 | 20230217 |
| EPI_ISL_19475768 | NSP3 | hCoV-19/Taiwan/CDC-F94333/2024 | V | 1062 | A | 49 | 20240918 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | V | 1062 | C | 2 | 20240816 |
| EPI_ISL_12753050 | NSP3 | hCoV-19/Russia/KIR-CRIE-7726742754/2022 | V | 1062 | G | 3 | 20220203 |
| EPI_ISL_19325803 | NSP3 | hCoV-19/Uganda/UVRI_469972/2024 | V | 1062 | T | 20 | 20240325 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1062 | S | 2 | 20210318 |
| EPI_ISL_19561072 | NSP3 | hCoV-19/Israel/ICH-741227067/2024 | V | 1062 | F | 695 | 20241110 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | V | 1062 | stop | 52 | 20230401 |
| EPI_ISL_11355418 | NSP3 | hCoV-19/France/GES-ChNa-210059856201/2021 | V | 1062 | insGWCC | 2 | 20210717 |
| EPI_ISL_18034732 | NSP3 | hCoV-19/Guangdong/GDCDC_MZ_0104/2023 | V | 1062 | L | 14 | 20230525 |
| EPI_ISL_18982737 | NSP3 | hCoV-19/South Korea/KDCA287584/2024 | V | 1062 | R | 16 | 20240214 |
| EPI_ISL_8471954 | NSP3 | hCoV-19/USA/FL-CDC-ASC210639478/2021 | V | 1062 | E | 1 | 20211222 |
| EPI_ISL_6357248 | NSP3 | hCoV-19/Romania/33055/2021 | V | 1062 | Y | 1 | 20210104 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | V | 1062 | Q | 1 | 20210916 |
| EPI_ISL_19712463 | NSP3 | hCoV-19/Japan/FR004-0032/2025 | V | 1062 | I | 385 | 20250106 |
| EPI_ISL_18984755 | NSP3 | hCoV-19/USA/UT-UPHL-240207408431/2024 | V | 1062 | insLFLVLIMLIIFWFSLELHL | 1 | 20240103 |
| EPI_ISL_14584695 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16380/2022 | V | 1062 | N | 3 | 20220725 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | V | 1062 | P | 1 | 20210805 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | V | 1062 | del | 66 | 20240211 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | T | 1063 | del | 53 | 20240211 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | T | 1063 | L | 17 | 20221204 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | T | 1063 | V | 1 | 20220729 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1063 | Q | 1 | 20221012 |
| EPI_ISL_19822450 | NSP3 | hCoV-19/Australia/QLD0x015466/2025 | T | 1063 | I | 13995 | 20250322 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | T | 1063 | insSA | 1 | 20211220 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | T | 1063 | F | 5 | 20210716 |
| EPI_ISL_16815227 | NSP3 | hCoV-19/United Arab Emirates/BTC-6242/2021 | T | 1063 | insQ | 3 | 20210701 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | T | 1063 | P | 1 | 20211228 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | T | 1063 | G | 2 | 20230418 |
| EPI_ISL_8193601 | NSP3 | hCoV-19/Egypt/NRC-6641/2020 | T | 1063 | H | 1 | 20200910 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1063 | M | 1 | 20210318 |
| EPI_ISL_19721400 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17323848/2025 | T | 1063 | S | 41 | 20250112 |
| EPI_ISL_8471954 | NSP3 | hCoV-19/USA/FL-CDC-ASC210639478/2021 | T | 1063 | K | 3 | 20211222 |
| EPI_ISL_19757556 | NSP3 | hCoV-19/USA/VA-VCUVAS3-RJAP975064/2025 | T | 1063 | A | 107 | 20250215 |
| EPI_ISL_19324546 | NSP3 | hCoV-19/USA/NJ-GBW-GKISBBBC42517/2024 | T | 1063 | N | 118 | 20240728 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1063 | E | 1 | 20240816 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | T | 1063 | insNIV | 1 | 20230217 |
| EPI_ISL_18911961 | NSP3 | hCoV-19/USA/CA-SEARCH-138936/2023 | Y | 1064 | H | 12 | 20231211 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1064 | S | 2 | 20220210 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | Y | 1064 | T | 2 | 20230217 |
| EPI_ISL_19324546 | NSP3 | hCoV-19/USA/NJ-GBW-GKISBBBC42517/2024 | Y | 1064 | del | 55 | 20240728 |
| EPI_ISL_12145015 | NSP3 | hCoV-19/Turkey/HSGM-G8330/2022 | Y | 1064 | stop | 8 | 20220312 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 1064 | F | 12 | 20240816 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | Y | 1064 | L | 16 | 20220721 |
| EPI_ISL_12584019 | NSP3 | hCoV-19/Turkey/HSGM-GS2971/2022 | Y | 1064 | N | 4 | 20220407 |
| EPI_ISL_17349548 | NSP3 | hCoV-19/India/KA-VRDL-33454/2023 | Y | 1064 | W | 4 | 20230224 |
| EPI_ISL_8193590 | NSP3 | hCoV-19/Egypt/NRC-7068/2020 | Y | 1064 | I | 3 | 20201108 |
| EPI_ISL_18823806 | NSP3 | hCoV-19/South Korea/KDCA283027/2023 | Y | 1064 | C | 10 | 20231230 |
| EPI_ISL_19573233 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBF30897/2024 | Y | 1064 | Q | 57 | 20241120 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | Y | 1064 | D | 2 | 20230418 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | Y | 1064 | K | 3 | 20211228 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1064 | M | 1 | 20210318 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | K | 1065 | V | 3 | 20220628 |
| EPI_ISL_11355411 | NSP3 | hCoV-19/France/GES-ChNa-210059746501/2021 | K | 1065 | insPstopNQLL | 1 | 20210716 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | K | 1065 | S | 6 | 20211018 |
| EPI_ISL_1703644 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-136/2021 | K | 1065 | A | 1 | 20210217 |
| EPI_ISL_7509709 | NSP3 | hCoV-19/USA/CA-CSMC599/2020 | K | 1065 | insPstopNL | 1 | 20201023 |
| EPI_ISL_17372502 | NSP3 | hCoV-19/India/TN-SPHL-2951/2023 | K | 1065 | E | 6 | 20230310 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | K | 1065 | del | 32 | 20240211 |
| EPI_ISL_16761878 | NSP3 | hCoV-19/Anhui/MCDC1907/2023 | K | 1065 | stop | 9 | 20230118 |
| EPI_ISL_19573233 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBF30897/2024 | K | 1065 | Q | 8 | 20241120 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | K | 1065 | C | 5 | 20221204 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | K | 1065 | insWTII | 1 | 20210825 |
| EPI_ISL_19079646 | NSP3 | hCoV-19/South Korea/KDCA291197/2024 | K | 1065 | R | 136 | 20240322 |
| EPI_ISL_17349548 | NSP3 | hCoV-19/India/KA-VRDL-33454/2023 | K | 1065 | Y | 2 | 20230224 |
| EPI_ISL_19325803 | NSP3 | hCoV-19/Uganda/UVRI_469972/2024 | K | 1065 | L | 86 | 20240325 |
| EPI_ISL_17879389 | NSP3 | hCoV-19/Chile/RM-EP453/2023 | K | 1065 | N | 45 | 20230315 |
| EPI_ISL_10286687 | NSP3 | hCoV-19/Germany/NW-RKI-I-547244/2022 | K | 1065 | T | 1 | 20220210 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1065 | H | 1 | 20230209 |
| EPI_ISL_18907925 | NSP3 | hCoV-19/USA/NY-URMC-O2S1L470-1/2024 | K | 1065 | I | 102 | 20240202 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | K | 1065 | G | 1 | 20230217 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | L | 1066 | K | 2 | 20230418 |
| EPI_ISL_19325803 | NSP3 | hCoV-19/Uganda/UVRI_469972/2024 | L | 1066 | stop | 35 | 20240325 |
| EPI_ISL_19573233 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBF30897/2024 | L | 1066 | P | 2 | 20241120 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | L | 1066 | C | 1 | 20230217 |
| EPI_ISL_19767099 | NSP3 | hCoV-19/Uganda/UVRI_04DB/2024 | L | 1066 | V | 52 | 20241223 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1066 | D | 1 | 20201214 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | L | 1066 | M | 13 | 20240307 |
| EPI_ISL_17372502 | NSP3 | hCoV-19/India/TN-SPHL-2951/2023 | L | 1066 | I | 14 | 20230310 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | L | 1066 | N | 3 | 20220628 |
| EPI_ISL_19156359 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00020655_01/2024 | L | 1066 | S | 8 | 20240116 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | L | 1066 | F | 10 | 20240816 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | L | 1066 | T | 4 | 20220825 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | L | 1066 | Q | 1 | 20200803 |
| EPI_ISL_8193609 | NSP3 | hCoV-19/Egypt/NRC-6072/2020 | L | 1066 | R | 1 | 20200627 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | L | 1066 | W | 8 | 20211018 |
| EPI_ISL_5049926 | NSP3 | hCoV-19/Spain/CT-LabRefCat-7192775/2021 | L | 1066 | E | 1 | 20210802 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | L | 1066 | del | 37 | 20240211 |
| EPI_ISL_17372502 | NSP3 | hCoV-19/India/TN-SPHL-2951/2023 | D | 1067 | R | 2 | 20230310 |
| EPI_ISL_10033145 | NSP3 | hCoV-19/France/CVL-HMN-22012270439/2022 | D | 1067 | V | 6 | 20220103 |
| EPI_ISL_17715841 | NSP3 | hCoV-19/France/OCC-HCL-723000712901/2023 | D | 1067 | G | 15 | 20230509 |
| EPI_ISL_19167783 | NSP3 | hCoV-19/England/CLIMB-CM7YMSIU/2024 | D | 1067 | B | 15 | 20240507 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | D | 1067 | del | 31 | 20240816 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1067 | P | 1 | 20210318 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | D | 1067 | L | 2 | 20230217 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | D | 1067 | T | 8 | 20220729 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | D | 1067 | I | 84 | 20230401 |
| EPI_ISL_18539107 | NSP3 | hCoV-19/South Korea/KDCA273396/2023 | D | 1067 | E | 13 | 20231019 |
| EPI_ISL_18736619 | NSP3 | hCoV-19/Russia/SPE-MH155798S/2023 | D | 1067 | stop | 5 | 20231123 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | D | 1067 | K | 2 | 20221012 |
| EPI_ISL_14537185 | NSP3 | hCoV-19/South Korea/KDCA99487/2022 | D | 1067 | A | 3 | 20220731 |
| EPI_ISL_18727157 | NSP3 | hCoV-19/England/CLIMB-CM7YGDX1/2023 | D | 1067 | H | 7 | 20231219 |
| EPI_ISL_19694330 | NSP3 | hCoV-19/USA/CO-CDPHE-42822170/2025 | D | 1067 | Y | 52 | 20250110 |
| EPI_ISL_19817667 | NSP3 | hCoV-19/Spain/PV-HUD-39363637/2025 | D | 1067 | N | 718 | 20250325 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | D | 1067 | M | 5 | 20221206 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | D | 1067 | S | 1 | 20220228 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | D | 1067 | F | 1 | 20220825 |
| EPI_ISL_5384073 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-64709/2021 | G | 1068 | A | 1 | 20210817 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | G | 1068 | insWM | 3 | 20220602 |
| EPI_ISL_8517240 | NSP3 | hCoV-19/England/PHEC-3Z079Z65/2021 | G | 1068 | W | 3 | 20211216 |
| EPI_ISL_17372502 | NSP3 | hCoV-19/India/TN-SPHL-2951/2023 | G | 1068 | I | 6 | 20230310 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | G | 1068 | M | 2 | 20211220 |
| EPI_ISL_13230920 | NSP3 | hCoV-19/USA/CT-YPL22-35949/2022 | G | 1068 | D | 5 | 20220604 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | G | 1068 | R | 1 | 20210825 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | G | 1068 | H | 1 | 20221012 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | G | 1068 | del | 32 | 20240816 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | G | 1068 | insstop | 1 | 20210805 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | G | 1068 | P | 4 | 20220812 |
| EPI_ISL_5049926 | NSP3 | hCoV-19/Spain/CT-LabRefCat-7192775/2021 | G | 1068 | F | 2 | 20210802 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | G | 1068 | insWMV | 1 | 20210801 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | G | 1068 | N | 57 | 20230401 |
| EPI_ISL_17510723 | NSP3 | hCoV-19/Japan/TKYkbm88991/2023 | G | 1068 | S | 7 | 20230328 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | G | 1068 | V | 8 | 20221206 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | G | 1068 | L | 1 | 20200803 |
| EPI_ISL_19096246 | NSP3 | hCoV-19/Wales/CLIMB-CM7YFKZA/2024 | G | 1068 | C | 9 | 20240422 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1068 | Q | 1 | 20220210 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | G | 1068 | Y | 2 | 20230421 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | G | 1068 | T | 3 | 20230418 |
| EPI_ISL_19752712 | NSP3 | hCoV-19/USA/KY-KSPHL-0036360/2024 | V | 1069 | A | 139 | 20241216 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | V | 1069 | P | 1 | 20220726 |
| EPI_ISL_19806150 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YFP4I/2025 | V | 1069 | I | 189849 | 20250227 |
| EPI_ISL_12934297 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1517/2021 | V | 1069 | insFVQNstopPstop | 1 | 20211231 |
| EPI_ISL_19577818 | NSP3 | hCoV-19/Canada/ON-PHL-202422191/2024 | V | 1069 | F | 228 | 20241119 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | V | 1069 | S | 5 | 20220825 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | V | 1069 | R | 3 | 20230217 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | V | 1069 | K | 2 | 20211220 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | V | 1069 | stop | 3 | 20220628 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | V | 1069 | insC | 1 | 20220119 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | V | 1069 | T | 1 | 20200803 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | V | 1069 | W | 81 | 20230401 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | V | 1069 | E | 2 | 20230209 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | V | 1069 | M | 5 | 20221031 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | V | 1069 | L | 13 | 20230217 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | V | 1069 | G | 1 | 20221012 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | V | 1069 | Y | 3 | 20211228 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | V | 1069 | del | 27 | 20240816 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | V | 1069 | Q | 1 | 20220812 |
| EPI_ISL_12934306 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1526/2022 | V | 1069 | D | 1 | 20220107 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | V | 1070 | insLF | 1 | 20210801 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | V | 1070 | N | 2 | 20220825 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1070 | E | 1 | 20201214 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | V | 1070 | S | 3 | 20220729 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | V | 1070 | del | 30 | 20240816 |
| EPI_ISL_4954207 | NSP3 | hCoV-19/Czech Republic/LH40764/2021 | V | 1070 | G | 1 | 20210813 |
| EPI_ISL_8163920 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0023/2021 | V | 1070 | insstopNKN | 1 | 20210824 |
| EPI_ISL_18119801 | NSP3 | hCoV-19/USA/TX-HMH-M-131125/2023 | V | 1070 | L | 17 | 20230810 |
| EPI_ISL_9856688 | NSP3 | hCoV-19/Finland/THL-202205544/2022 | V | 1070 | D | 1 | 20220118 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | V | 1070 | M | 44 | 20230401 |
| EPI_ISL_19673955 | NSP3 | hCoV-19/Israel/SMC-7118717/2025 | V | 1070 | I | 876 | 20250104 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | V | 1070 | T | 3 | 20221012 |
| EPI_ISL_19637909 | NSP3 | hCoV-19/Russia/TYU-RII-MH217389S/2024 | V | 1070 | F | 306 | 20241130 |
| EPI_ISL_19596478 | NSP3 | hCoV-19/Sweden/AC-24_SE100_24CS502598/2024 | V | 1070 | A | 91 | 20241119 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | V | 1070 | P | 3 | 20230421 |
| EPI_ISL_10523125 | NSP3 | hCoV-19/India/DH-ICMR-NIV-INSACOG-GSEQ-9775/2022 | V | 1070 | stop | 1 | 20220207 |
| EPI_ISL_12228997 | NSP3 | hCoV-19/Ecuador/INSPI-M1A/2020 | V | 1070 | insL | 1 | 20201124 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | V | 1070 | C | 39 | 20230401 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | V | 1070 | Q | 2 | 20220726 |
| EPI_ISL_15292699 | NSP3 | hCoV-19/India/MH-NCCS-2750000428789/2021 | V | 1070 | Y | 6 | 20211203 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | C | 1071 | D | 1 | 20220825 |
| EPI_ISL_15292699 | NSP3 | hCoV-19/India/MH-NCCS-2750000428789/2021 | C | 1071 | insL | 1 | 20211203 |
| EPI_ISL_11055026 | NSP3 | hCoV-19/India/HP-NCDC-5409226/2021 | C | 1071 | insLYRNstopPstopVGH | 1 | 20210826 |
| EPI_ISL_15494430 | NSP3 | hCoV-19/Russia/SMO-RII-MH97791S/2022 | C | 1071 | stop | 29 | 20221001 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | C | 1071 | V | 53 | 20230401 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | C | 1071 | E | 2 | 20220726 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | C | 1071 | N | 3 | 20230421 |
| EPI_ISL_7547077 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081721-1058/2021 | C | 1071 | insF | 1 | 20210817 |
| EPI_ISL_9270693 | NSP3 | hCoV-19/Pakistan/9655671/2022/2022 | C | 1071 | Q | 3 | 20220103 |
| EPI_ISL_18995329 | NSP3 | hCoV-19/Japan/PG-599949/2024 | C | 1071 | F | 443 | 20240222 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | C | 1071 | insEIL | 1 | 20220721 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | C | 1071 | insFG | 1 | 20220112 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | C | 1071 | W | 10 | 20220729 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | C | 1071 | G | 4 | 20220628 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | C | 1071 | P | 1 | 20220812 |
| EPI_ISL_19499696 | NSP3 | hCoV-19/USA/TX-HMH-M-146110/2024 | C | 1071 | S | 39 | 20240904 |
| EPI_ISL_19760580 | NSP3 | hCoV-19/Canada/AB-ABPHL-131281/2025 | C | 1071 | Y | 2226 | 20250212 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | C | 1071 | T | 7 | 20230415 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | C | 1071 | I | 3 | 20230209 |
| EPI_ISL_19003712 | NSP3 | hCoV-19/USA/OH-ODH-SC4030992/2024 | C | 1071 | R | 149 | 20240301 |
| EPI_ISL_17372502 | NSP3 | hCoV-19/India/TN-SPHL-2951/2023 | C | 1071 | L | 9 | 20230310 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | C | 1071 | del | 35 | 20240211 |
| EPI_ISL_456407 | NSP3 | hCoV-19/Iran/wuhan-5-2-1399-205/2020 | T | 1072 | G | 1 | 20200415 |
| EPI_ISL_19507697 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293263/2024 | T | 1072 | K | 14 | 20241011 |
| EPI_ISL_8517240 | NSP3 | hCoV-19/England/PHEC-3Z079Z65/2021 | T | 1072 | Y | 4 | 20211216 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | T | 1072 | P | 2 | 20230421 |
| EPI_ISL_7629813 | NSP3 | hCoV-19/Kazakhstan/PAV-NRL-1273/2021 | T | 1072 | stop | 1 | 20211011 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | T | 1072 | L | 85 | 20230401 |
| EPI_ISL_15655762 | NSP3 | hCoV-19/India/KA-20221_S254_R1_001/2022 | T | 1072 | C | 2 | 20220922 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | T | 1072 | insYK | 1 | 20210816 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | T | 1072 | Q | 14 | 20221206 |
| EPI_ISL_17486450 | NSP3 | hCoV-19/USA/TX-CDC-QDX48685418/2023 | T | 1072 | V | 10 | 20230402 |
| EPI_ISL_3922821 | NSP3 | hCoV-19/USA/ID-IBL-638513/2020 | T | 1072 | W | 1 | 20200803 |
| EPI_ISL_19391296 | NSP3 | hCoV-19/USA/IL-RIPHL_14767_G/2024 | T | 1072 | S | 48 | 20240814 |
| EPI_ISL_14378202 | NSP3 | hCoV-19/Germany/NW-RKI-I-916496/2022 | T | 1072 | insEIDPTDVFYKENSYTTTIKPVTYKLDGVVCT | 1 | 20220711 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | T | 1072 | del | 45 | 20240211 |
| EPI_ISL_19819880 | NSP3 | hCoV-19/Canada/ON-HRL-20251019185807-v1/2025 | T | 1072 | I | 3939 | 20250304 |
| EPI_ISL_5049926 | NSP3 | hCoV-19/Spain/CT-LabRefCat-7192775/2021 | T | 1072 | D | 2 | 20210802 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1072 | N | 2 | 20240816 |
| EPI_ISL_17372556 | NSP3 | hCoV-19/India/TN-SPHL-2839/2023 | T | 1072 | R | 2 | 20230303 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | T | 1072 | E | 3 | 20230217 |
| EPI_ISL_19088077 | NSP3 | hCoV-19/England/CLIMB-CM7YJQXE/2024 | T | 1072 | A | 289 | 20240419 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | T | 1072 | F | 4 | 20221031 |
| EPI_ISL_18936229 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00097/2023 | E | 1073 | L | 7 | 20230415 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | E | 1073 | P | 2 | 20210817 |
| EPI_ISL_18312731 | NSP3 | hCoV-19/South Korea/KDCA264554/2023 | E | 1073 | G | 133 | 20230911 |
| EPI_ISL_3923180 | NSP3 | hCoV-19/USA/ID-IBL-646308/2020 | E | 1073 | insG | 1 | 20200819 |
| EPI_ISL_9270693 | NSP3 | hCoV-19/Pakistan/9655671/2022/2022 | E | 1073 | T | 11 | 20220103 |
| EPI_ISL_19719071 | NSP3 | hCoV-19/env/Germany/BY-LGL-6486477/2025 | E | 1073 | K | 83 | 20250129 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | E | 1073 | del | 47 | 20240816 |
| EPI_ISL_496818 | NSP3 | hCoV-19/Panama/335631/2020 | E | 1073 | H | 1 | 20200402 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | E | 1073 | V | 9 | 20230421 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | E | 1073 | I | 5 | 20230415 |
| EPI_ISL_13384886 | NSP3 | hCoV-19/Germany/BY-RKI-I-871961/2022 | E | 1073 | stop | 6 | 20220518 |
| EPI_ISL_13563927 | NSP3 | hCoV-19/USA/ID-IBL-824817/2022 | E | 1073 | S | 5 | 20220602 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | E | 1073 | Y | 31 | 20230401 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | E | 1073 | insRNstopXstopVGQL | 1 | 20230401 |
| EPI_ISL_16296317 | NSP3 | hCoV-19/Netherlands/GE-RIVM-121362/2022 | E | 1073 | Q | 11 | 20221206 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | E | 1073 | C | 1 | 20221012 |
| EPI_ISL_19507697 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293263/2024 | E | 1073 | Z | 8 | 20241011 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | E | 1073 | N | 5 | 20230217 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | E | 1073 | R | 7 | 20220602 |
| EPI_ISL_19327268 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y8TUH/2024 | E | 1073 | D | 350 | 20240717 |
| EPI_ISL_19485954 | NSP3 | hCoV-19/South Korea/KDCA295989/2024 | E | 1073 | A | 27 | 20240924 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | E | 1073 | F | 47 | 20230401 |
| EPI_ISL_15543217 | NSP3 | hCoV-19/France/HDF-cerba-22V0056183/2022 | I | 1074 | S | 5 | 20220829 |
| EPI_ISL_19719071 | NSP3 | hCoV-19/env/Germany/BY-LGL-6486477/2025 | I | 1074 | L | 176 | 20250129 |
| EPI_ISL_16258498 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1984/2022 | I | 1074 | E | 1 | 20220730 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | I | 1074 | Y | 6 | 20230217 |
| EPI_ISL_13563927 | NSP3 | hCoV-19/USA/ID-IBL-824817/2022 | I | 1074 | K | 3 | 20220602 |
| EPI_ISL_8085587 | NSP3 | hCoV-19/England/MILK-2F578D0/2021 | I | 1074 | J | 3 | 20211217 |
| EPI_ISL_15963749 | NSP3 | hCoV-19/USA/IL-11172022166/2022 | I | 1074 | F | 5 | 20221110 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | I | 1074 | Q | 2 | 20210825 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | I | 1074 | P | 2 | 20230415 |
| EPI_ISL_8517240 | NSP3 | hCoV-19/England/PHEC-3Z079Z65/2021 | I | 1074 | W | 1 | 20211216 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | I | 1074 | A | 1 | 20221012 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | I | 1074 | D | 2 | 20230209 |
| EPI_ISL_13346235 | NSP3 | hCoV-19/USA/ID-IBL-824958/2022 | I | 1074 | N | 6 | 20220602 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | I | 1074 | stop | 2 | 20210817 |
| EPI_ISL_19700488 | NSP3 | hCoV-19/Israel/ICH-741227260/2025 | I | 1074 | V | 638 | 20250115 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | I | 1074 | del | 49 | 20240816 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | I | 1074 | R | 32 | 20230401 |
| EPI_ISL_19678394 | NSP3 | hCoV-19/USA/OH-CDC-LC1128392/2025 | I | 1074 | T | 1074 | 20250108 |
| EPI_ISL_18030067 | NSP3 | hCoV-19/Canada/AB-ABPHL-99474/2023 | I | 1074 | M | 40 | 20230626 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | I | 1074 | insIstop | 1 | 20220721 |
| EPI_ISL_17372502 | NSP3 | hCoV-19/India/TN-SPHL-2951/2023 | D | 1075 | V | 17 | 20230310 |
| EPI_ISL_1076946 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-22418/2021 | D | 1075 | C | 1 | 20210111 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | D | 1075 | insstopPstopV | 1 | 20200721 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | D | 1075 | Q | 45 | 20230415 |
| EPI_ISL_19822361 | NSP3 | hCoV-19/New Zealand/25YA0817/2025 | D | 1075 | N | 1512 | 20250328 |
| EPI_ISL_19342157 | NSP3 | hCoV-19/Jordan/MOH-CPHL991/2024 | D | 1075 | del | 56 | 20240211 |
| EPI_ISL_19750668 | NSP3 | hCoV-19/Japan/FR044-0014/2025 | D | 1075 | E | 243 | 20250114 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | D | 1075 | S | 9 | 20221012 |
| EPI_ISL_19143037 | NSP3 | hCoV-19/USA/CA-CDPH-500136509/2024 | D | 1075 | H | 14 | 20240319 |
| EPI_ISL_19805431 | NSP3 | hCoV-19/USA/NY-URMC-P3S1U511-1/2025 | D | 1075 | G | 184 | 20250109 |
| EPI_ISL_17427535 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2884/2023 | D | 1075 | insstop | 25 | 20230401 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | D | 1075 | I | 5 | 20220812 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | D | 1075 | M | 1 | 20230217 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | D | 1075 | insEYKG | 2 | 20210823 |
| EPI_ISL_18389247 | NSP3 | hCoV-19/Denmark/DCGC-661218/2023 | D | 1075 | B | 38 | 20230925 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | D | 1075 | T | 7 | 20221206 |
| EPI_ISL_19414452 | NSP3 | hCoV-19/Israel/SMC-7118297/2024 | D | 1075 | A | 19 | 20240819 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | D | 1075 | L | 3 | 20211018 |
| EPI_ISL_8163920 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0023/2021 | D | 1075 | insNC | 1 | 20210824 |
| EPI_ISL_19488673 | NSP3 | hCoV-19/Japan/FR021-0914/2024 | D | 1075 | Y | 418 | 20240905 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | D | 1075 | stop | 10 | 20230401 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | D | 1075 | K | 8 | 20230217 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | P | 1076 | R | 2 | 20220729 |
| EPI_ISL_19342161 | NSP3 | hCoV-19/Jordan/MOH-CPHL1043/2024 | P | 1076 | del | 100 | 20240213 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | P | 1076 | insVC | 1 | 20220224 |
| EPI_ISL_19229387 | NSP3 | hCoV-19/Luxembourg/LNS0800146/2024 | P | 1076 | L | 65 | 20240523 |
| EPI_ISL_18910516 | NSP3 | hCoV-19/England/CLIMB-CM7YRACZ/2024 | P | 1076 | S | 111 | 20240114 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | P | 1076 | I | 5 | 20230421 |
| EPI_ISL_15129384 | NSP3 | hCoV-19/Germany/BW-RKI-I-973372/2022 | P | 1076 | T | 17 | 20220906 |
| EPI_ISL_2349103 | NSP3 | hCoV-19/Greece/180402/2021 | P | 1076 | insVTY | 1 | 20210324 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | P | 1076 | N | 4 | 20220825 |
| EPI_ISL_5049926 | NSP3 | hCoV-19/Spain/CT-LabRefCat-7192775/2021 | P | 1076 | Y | 1 | 20210802 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | P | 1076 | G | 2 | 20220721 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | P | 1076 | K | 2 | 20220302 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | P | 1076 | insstop | 1 | 20210809 |
| EPI_ISL_17202885 | NSP3 | hCoV-19/France/GES-IPP05190/2023 | P | 1076 | H | 16 | 20230213 |
| EPI_ISL_12563531 | NSP3 | hCoV-19/Wales/PHWC-PJ4N8A/2022 | P | 1076 | A | 9 | 20220416 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | P | 1076 | stop | 7 | 20221206 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | P | 1076 | W | 1 | 20210805 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | P | 1076 | E | 7 | 20230415 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | P | 1076 | Q | 3 | 20210817 |
| EPI_ISL_19750155 | NSP3 | hCoV-19/Canada/AB-ABPHL-131191/2025 | K | 1077 | R | 2349 | 20250206 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | K | 1077 | D | 3 | 20220825 |
| EPI_ISL_18790614 | NSP3 | hCoV-19/France/PAC-HCL723001882801/2023 | K | 1077 | E | 78 | 20231226 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | K | 1077 | P | 6 | 20230421 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1077 | insTLLSLREVRT | 1 | 20230209 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 1077 | Y | 1 | 20221012 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | K | 1077 | S | 16 | 20230411 |
| EPI_ISL_19756597 | NSP3 | hCoV-19/Liaoning/LNCDC-028-2/2025 | K | 1077 | T | 82 | 20250213 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | K | 1077 | del | 61 | 20240218 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1077 | F | 4 | 20240816 |
| EPI_ISL_18994388 | NSP3 | hCoV-19/USA/CA-HLX-STM-WBPU56FBG/2024 | K | 1077 | M | 31 | 20240226 |
| EPI_ISL_19784932 | NSP3 | hCoV-19/Italy/EMR-IZSLER-063335-003-01/2025 | K | 1077 | N | 5338 | 20250220 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | K | 1077 | insIIQFL | 1 | 20211015 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | K | 1077 | V | 4 | 20221206 |
| EPI_ISL_19747123 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00049/2022 | K | 1077 | L | 6 | 20221206 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1077 | A | 1 | 20210318 |
| EPI_ISL_8517240 | NSP3 | hCoV-19/England/PHEC-3Z079Z65/2021 | K | 1077 | I | 4 | 20211216 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | K | 1077 | Q | 8 | 20221204 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | K | 1077 | C | 1 | 20220228 |
| EPI_ISL_19212702 | NSP3 | hCoV-19/env/India/MH-NCL-31-01/2023 | K | 1077 | stop | 27 | 20231201 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | L | 1078 | I | 8 | 20230209 |
| EPI_ISL_19780656 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13647/2024 | L | 1078 | F | 1125 | 20241113 |
| EPI_ISL_18403137 | NSP3 | hCoV-19/Belgium/UGent-1527/2023 | L | 1078 | W | 414 | 20231004 |
| EPI_ISL_9270693 | NSP3 | hCoV-19/Pakistan/9655671/2022/2022 | L | 1078 | D | 2 | 20220103 |
| EPI_ISL_3922925 | NSP3 | hCoV-19/USA/ID-IBL-749565/2021 | L | 1078 | insV | 1 | 20210813 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | L | 1078 | stop | 7 | 20220728 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | L | 1078 | G | 1 | 20221206 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | L | 1078 | del | 69 | 20240218 |
| EPI_ISL_18411191 | NSP3 | hCoV-19/South Korea/KDCA268173/2023 | L | 1078 | S | 19 | 20230919 |
| EPI_ISL_5049897 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1638258/2021 | L | 1078 | M | 1 | 20210510 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | L | 1078 | E | 1 | 20220812 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | L | 1078 | K | 5 | 20220726 |
| EPI_ISL_7307486 | NSP3 | hCoV-19/France/IDF-HMN-21112250611/2021 | L | 1078 | Y | 1 | 20211122 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 1078 | V | 35 | 20230217 |
| EPI_ISL_8383073 | NSP3 | hCoV-19/Poland/MIHE-211214012/2021 | L | 1078 | C | 1 | 20211214 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | L | 1078 | Q | 12 | 20230421 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | L | 1078 | T | 7 | 20221012 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | D | 1079 | I | 7 | 20221204 |
| EPI_ISL_11055034 | NSP3 | hCoV-19/India/HP-NCDC-5409247/2021 | D | 1079 | insMFAFNQ | 1 | 20210830 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | D | 1079 | R | 1 | 20210520 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | D | 1079 | insstopVGQLLstopERQF | 2 | 20220602 |
| EPI_ISL_19772197 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10762/2025 | D | 1079 | A | 32 | 20250212 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1079 | S | 6 | 20220210 |
| EPI_ISL_13812306 | NSP3 | hCoV-19/USA/ID-IBL-832295/2022 | D | 1079 | F | 5 | 20220628 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | D | 1079 | insLSstopIstop | 1 | 20220222 |
| EPI_ISL_19631062 | NSP3 | hCoV-19/Australia/TAS008722/2024 | D | 1079 | Y | 136 | 20241203 |
| EPI_ISL_18983851 | NSP3 | hCoV-19/USA/TX-PHH-CS-03562/2024 | D | 1079 | B | 14 | 20240213 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | D | 1079 | insstop | 1 | 20210730 |
| EPI_ISL_17708725 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200382996N2/2022 | D | 1079 | insXX | 7 | 20220331 |
| EPI_ISL_19394736 | NSP3 | hCoV-19/USA/PA-CDC-LC1117738/2024 | D | 1079 | G | 105 | 20240826 |
| EPI_ISL_8525491 | NSP3 | hCoV-19/Senegal/2221/2020 | D | 1079 | insR | 2 | 20200402 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | D | 1079 | insstopV | 1 | 20220705 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | D | 1079 | C | 1 | 20220224 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | D | 1079 | Q | 4 | 20221206 |
| EPI_ISL_19052158 | NSP3 | hCoV-19/USA/CA-SEARCH-230352/2023 | D | 1079 | E | 88 | 20231013 |
| EPI_ISL_19651685 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55878/2024 | D | 1079 | N | 213 | 20241209 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | D | 1079 | K | 5 | 20230209 |
| EPI_ISL_5406649 | NSP3 | hCoV-19/Sweden/UUH-000200049116/2021 | D | 1079 | insXXX | 2 | 20210527 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | D | 1079 | T | 59 | 20230411 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | D | 1079 | del | 74 | 20240218 |
| EPI_ISL_17372502 | NSP3 | hCoV-19/India/TN-SPHL-2951/2023 | D | 1079 | V | 21 | 20230310 |
| EPI_ISL_12692479 | NSP3 | hCoV-19/USA/CA-HLX-STM-K5FN633KV/2021 | D | 1079 | H | 19 | 20211223 |
| EPI_ISL_13714581 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-107/2022 | D | 1079 | L | 6 | 20220613 |
| EPI_ISL_19805595 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U654-1/2025 | N | 1080 | S | 450 | 20250218 |
| EPI_ISL_15716741 | NSP3 | hCoV-19/Slovenia/23-056817-MB/2022 | N | 1080 | insY | 11 | 20221024 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | N | 1080 | stop | 1 | 20221204 |
| EPI_ISL_19388087 | NSP3 | hCoV-19/England/WSI-326404BE/2022 | N | 1080 | B | 10 | 20221208 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | N | 1080 | P | 1 | 20220825 |
| EPI_ISL_8809271 | NSP3 | hCoV-19/Sweden/03_SE600_500000113719SP/2021 | N | 1080 | insXX | 1 | 20211223 |
| EPI_ISL_11514443 | NSP3 | hCoV-19/Brazil/RS-LMM71123/2022 | N | 1080 | insSX | 1 | 20220310 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | N | 1080 | C | 1 | 20201214 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | N | 1080 | Q | 20 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | N | 1080 | V | 10 | 20240816 |
| EPI_ISL_18417738 | NSP3 | hCoV-19/Ireland/G-SUH-N1881/2023 | N | 1080 | H | 114 | 20230919 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | N | 1080 | I | 71 | 20230411 |
| EPI_ISL_19534794 | NSP3 | hCoV-19/Japan/FR021-0983/2024 | N | 1080 | Y | 142 | 20241018 |
| EPI_ISL_19518012 | NSP3 | hCoV-19/Poland/Kce-598/2024 | N | 1080 | D | 391 | 20240930 |
| EPI_ISL_1703644 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-136/2021 | N | 1080 | A | 2 | 20210217 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | N | 1080 | del | 77 | 20240218 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | N | 1080 | F | 3 | 20220812 |
| EPI_ISL_19470633 | NSP3 | hCoV-19/Canada/ON-PHL-202415686/2024 | N | 1080 | T | 224 | 20240926 |
| EPI_ISL_19623813 | NSP3 | hCoV-19/Sichuan/ZGCDC-zgxg344/2024 | N | 1080 | K | 163 | 20240617 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | N | 1080 | W | 1 | 20210805 |
| EPI_ISL_16161530 | NSP3 | hCoV-19/Chile/LR-134184/2022 | N | 1080 | G | 9 | 20221202 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | N | 1080 | insQL | 1 | 20211018 |
| EPI_ISL_4348473 | NSP3 | hCoV-19/Thailand/ChaiNat_SEQ16157/2021 | N | 1080 | insSXXXXX | 1 | 20210907 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | N | 1080 | L | 50 | 20230401 |
| EPI_ISL_11054609 | NSP3 | hCoV-19/India/DL-NCDC-58093/2021 | N | 1080 | M | 51 | 20210924 |
| EPI_ISL_11821637 | NSP3 | hCoV-19/Germany/HH-RKI-I-694905/2022 | N | 1080 | R | 6 | 20220327 |
| EPI_ISL_8163920 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0023/2021 | Y | 1081 | insL | 1 | 20210824 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | Y | 1081 | S | 42 | 20230401 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | Y | 1081 | A | 3 | 20230217 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | Y | 1081 | I | 20 | 20230411 |
| EPI_ISL_18797561 | NSP3 | hCoV-19/USA/MS-MSPHL-0042/2024 | Y | 1081 | N | 5 | 20240103 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | Y | 1081 | Q | 6 | 20220705 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | Y | 1081 | del | 76 | 20240218 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | Y | 1081 | D | 2 | 20220825 |
| EPI_ISL_5934824 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689492_CAM_IZSM_COLLI_TIGEM/2021 | Y | 1081 | T | 2 | 20211015 |
| EPI_ISL_15083749 | NSP3 | hCoV-19/France/OCC-HCL722003977501/2022 | Y | 1081 | stop | 7 | 20220905 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 1081 | L | 31 | 20230217 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | Y | 1081 | W | 6 | 20210817 |
| EPI_ISL_16161530 | NSP3 | hCoV-19/Chile/LR-134184/2022 | Y | 1081 | V | 6 | 20221202 |
| EPI_ISL_18830268 | NSP3 | hCoV-19/Denmark/DCGC-670560/2024 | Y | 1081 | C | 59 | 20240101 |
| EPI_ISL_11821637 | NSP3 | hCoV-19/Germany/HH-RKI-I-694905/2022 | Y | 1081 | R | 1 | 20220327 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | Y | 1081 | E | 1 | 20201214 |
| EPI_ISL_12177265 | NSP3 | hCoV-19/France/CVL-LBZCentre-A350081755/2022 | Y | 1081 | H | 14 | 20220411 |
| EPI_ISL_4462403 | NSP3 | hCoV-19/India/MP-NCDC-4109228/2021 | Y | 1081 | insAFNQXX | 1 | 20210603 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | Y | 1081 | M | 1 | 20220224 |
| EPI_ISL_8517240 | NSP3 | hCoV-19/England/PHEC-3Z079Z65/2021 | Y | 1081 | P | 2 | 20211216 |
| EPI_ISL_18454300 | NSP3 | hCoV-19/Thailand/NIC_SKA_8201/2023 | Y | 1081 | F | 80 | 20231020 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | Y | 1081 | insH | 1 | 20210803 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | Y | 1081 | K | 1 | 20220228 |
| EPI_ISL_11054609 | NSP3 | hCoV-19/India/DL-NCDC-58093/2021 | Y | 1081 | insA | 16 | 20210924 |
| EPI_ISL_18454290 | NSP3 | hCoV-19/Thailand/NIC_SKA_8189/2023 | Y | 1082 | N | 5 | 20231020 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | Y | 1082 | T | 7 | 20230217 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | Y | 1082 | insstop | 1 | 20210806 |
| EPI_ISL_17763785 | NSP3 | hCoV-19/USA/TX-HMH-129089/2023 | Y | 1082 | I | 30 | 20230516 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | Y | 1082 | W | 39 | 20230401 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | Y | 1082 | D | 6 | 20230415 |
| EPI_ISL_2349103 | NSP3 | hCoV-19/Greece/180402/2021 | Y | 1082 | insCX | 1 | 20210324 |
| EPI_ISL_17372502 | NSP3 | hCoV-19/India/TN-SPHL-2951/2023 | Y | 1082 | C | 13 | 20230310 |
| EPI_ISL_8812967 | NSP3 | hCoV-19/USA/OR-TRACE-POLK-042521-1190/2021 | Y | 1082 | insTIIIR | 1 | 20210425 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1082 | G | 1 | 20220210 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Y | 1082 | Q | 3 | 20221012 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 1082 | L | 29 | 20230217 |
| EPI_ISL_3299528 | NSP3 | hCoV-19/Sweden/UUH-000199563181/2021 | Y | 1082 | insXXX | 1 | 20210428 |
| EPI_ISL_2375511 | NSP3 | hCoV-19/Brazil/RS-LMM54029/2021 | Y | 1082 | E | 1 | 20210416 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | Y | 1082 | insIL | 2 | 20210921 |
| EPI_ISL_10380588 | NSP3 | hCoV-19/England/DHSC-CYNERQN/2022 | Y | 1082 | R | 2 | 20220203 |
| EPI_ISL_18823806 | NSP3 | hCoV-19/South Korea/KDCA283027/2023 | Y | 1082 | stop | 8 | 20231230 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | Y | 1082 | M | 2 | 20210817 |
| EPI_ISL_2349103 | NSP3 | hCoV-19/Greece/180402/2021 | Y | 1082 | V | 2 | 20210324 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | Y | 1082 | H | 15 | 20230401 |
| EPI_ISL_7660500 | NSP3 | hCoV-19/Sweden/UUH-500000060851SP/2021 | Y | 1082 | insXX | 1 | 20211202 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | Y | 1082 | del | 77 | 20240218 |
| EPI_ISL_18936194 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00034/2023 | Y | 1082 | F | 28 | 20230406 |
| EPI_ISL_486857 | NSP3 | hCoV-19/Senegal/9867/2020 | Y | 1082 | P | 2 | 20200420 |
| EPI_ISL_19507696 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10149703/2024 | Y | 1082 | S | 7 | 20240925 |
| EPI_ISL_17782370 | NSP3 | hCoV-19/Austria/AGES-1138911/2023 | K | 1083 | E | 17 | 20230530 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | K | 1083 | L | 4 | 20220705 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | K | 1083 | S | 4 | 20230421 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | K | 1083 | insIII | 1 | 20211231 |
| EPI_ISL_13622431 | NSP3 | hCoV-19/USA/NY-PRL-220624_01M10/2022 | K | 1083 | I | 7 | 20220621 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | K | 1083 | V | 3 | 20210817 |
| EPI_ISL_17275345 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45871/2023 | K | 1083 | H | 5 | 20230217 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | K | 1083 | D | 1 | 20220726 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | K | 1083 | A | 2 | 20220228 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | K | 1083 | insII | 7 | 20230401 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 1083 | stop | 19 | 20230217 |
| EPI_ISL_18855024 | NSP3 | hCoV-19/Greece/PHLnetwork_KEDY_17662/2023 | K | 1083 | T | 25 | 20231228 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | K | 1083 | del | 105 | 20240218 |
| EPI_ISL_19719019 | NSP3 | hCoV-19/Germany/BY-RKI-I-1147631/2025 | K | 1083 | R | 429 | 20250120 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | K | 1083 | Y | 3 | 20211018 |
| EPI_ISL_19045110 | NSP3 | hCoV-19/USA/CA-SEARCH-139857/2024 | K | 1083 | N | 40 | 20240203 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 1083 | C | 2 | 20221012 |
| EPI_ISL_18936194 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00034/2023 | K | 1083 | Q | 7 | 20230406 |
| EPI_ISL_17256102 | NSP3 | hCoV-19/Germany/NW-RKI-I-1121983/2023 | K | 1083 | M | 11 | 20230222 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | K | 1084 | N | 5 | 20230421 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1084 | V | 2 | 20230209 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 1084 | G | 2 | 20221012 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | K | 1084 | A | 8 | 20230401 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | K | 1084 | stop | 7 | 20220705 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | K | 1084 | D | 4 | 20220812 |
| EPI_ISL_9588096 | NSP3 | hCoV-19/England/PHEC-4X03FZA3/2021 | K | 1084 | Q | 24 | 20211219 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | K | 1084 | C | 1 | 20210622 |
| EPI_ISL_18226351 | NSP3 | hCoV-19/env/India/MH-FMR_K5-52a/2023 | K | 1084 | R | 42 | 20230302 |
| EPI_ISL_17275345 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45871/2023 | K | 1084 | L | 10 | 20230217 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | K | 1084 | del | 108 | 20240218 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | K | 1084 | S | 2 | 20210920 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1084 | P | 1 | 20210318 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | K | 1084 | T | 7 | 20230925 |
| EPI_ISL_18411065 | NSP3 | hCoV-19/South Korea/KDCA268037/2023 | K | 1084 | E | 31 | 20230912 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | K | 1084 | I | 12 | 20230401 |
| EPI_ISL_2965917 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-GSEQ-4219/2021 | D | 1085 | stop | 1 | 20210613 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | D | 1085 | L | 2 | 20220628 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | D | 1085 | R | 29 | 20230401 |
| EPI_ISL_10765062 | NSP3 | hCoV-19/Thailand/NIC_SNI_SEQ5359/2022 | D | 1085 | I | 4 | 20220105 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | D | 1085 | F | 3 | 20220228 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | D | 1085 | Q | 3 | 20221206 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | D | 1085 | H | 10 | 20221012 |
| EPI_ISL_19717928 | NSP3 | hCoV-19/Finland/THL-01005/2025 | D | 1085 | N | 526 | 20250112 |
| EPI_ISL_19507914 | NSP3 | hCoV-19/Japan/FR007-0097/2024 | D | 1085 | Y | 1048 | 20240925 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | D | 1085 | T | 19 | 20230401 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | D | 1085 | del | 117 | 20240218 |
| EPI_ISL_14562148 | NSP3 | hCoV-19/Mexico/PUE_CIAD-IMSS_202201091952/2022 | D | 1085 | V | 3 | 20220802 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | D | 1085 | S | 3 | 20210806 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | D | 1085 | A | 27 | 20230925 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | D | 1085 | C | 4 | 20220825 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | D | 1085 | E | 15 | 20220705 |
| EPI_ISL_19467839 | NSP3 | hCoV-19/Singapore/R54MQ22/2024 | D | 1085 | G | 38 | 20240920 |
| EPI_ISL_18769084 | NSP3 | hCoV-19/Canada/ON-PHL-202401735/2024 | D | 1085 | B | 91 | 20240103 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | D | 1085 | K | 5 | 20220812 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | N | 1086 | R | 19 | 20220705 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | N | 1086 | C | 3 | 20220628 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | N | 1086 | V | 4 | 20220825 |
| EPI_ISL_16919853 | NSP3 | hCoV-19/USA/TX-HMH-M-124666/2023 | N | 1086 | H | 28 | 20230131 |
| EPI_ISL_18228556 | NSP3 | hCoV-19/Turkey/HSGM-AA00024/2023 | N | 1086 | I | 9 | 20230414 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | N | 1086 | W | 1 | 20220109 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | N | 1086 | G | 7 | 20230217 |
| EPI_ISL_15003359 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1253/2021 | N | 1086 | L | 2 | 20211002 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | N | 1086 | P | 1 | 20220726 |
| EPI_ISL_18823586 | NSP3 | hCoV-19/South Korea/KDCA282799/2023 | N | 1086 | D | 20 | 20231228 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | N | 1086 | Q | 23 | 20230217 |
| EPI_ISL_2294534 | NSP3 | hCoV-19/Italy/SAR-AOUSS10_1805/2021 | N | 1086 | stop | 1 | 20210518 |
| EPI_ISL_19657597 | NSP3 | hCoV-19/Canada/AB-ABPHL-129637/2024 | N | 1086 | T | 83 | 20241222 |
| EPI_ISL_19734893 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17330478/2025 | N | 1086 | S | 131 | 20250130 |
| EPI_ISL_2965917 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-GSEQ-4219/2021 | N | 1086 | E | 1 | 20210613 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | N | 1086 | del | 89 | 20240218 |
| EPI_ISL_19684933 | NSP3 | hCoV-19/Japan/FR062-0012/2025 | N | 1086 | K | 37 | 20250109 |
| EPI_ISL_19350235 | NSP3 | hCoV-19/USA/NJ-CDC-LC1113610/2024 | N | 1086 | Y | 163 | 20240809 |
| EPI_ISL_14562156 | NSP3 | hCoV-19/Mexico/SIN_CIAD-IMSS_202201030660/2022 | N | 1086 | B | 2 | 20220804 |
| EPI_ISL_19508878 | NSP3 | hCoV-19/Spain/AS-HUCA-232476317/2024 | S | 1087 | Y | 127 | 20241014 |
| EPI_ISL_18296257 | NSP3 | hCoV-19/USA/WA-HLX-VSX-A240346/2023 | S | 1087 | C | 24 | 20230817 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | S | 1087 | stop | 9 | 20230401 |
| EPI_ISL_14861670 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12238/2022 | S | 1087 | H | 6 | 20220708 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | S | 1087 | Q | 7 | 20220705 |
| EPI_ISL_19810369 | NSP3 | hCoV-19/Singapore/Y25R13MSC27/2025 | S | 1087 | F | 3631 | 20250321 |
| EPI_ISL_12319508 | NSP3 | hCoV-19/Turkey/HSGM-3GS1302/2022 | S | 1087 | P | 7 | 20220312 |
| EPI_ISL_18214966 | NSP3 | hCoV-19/Kazakhstan/AST-705/2023 | S | 1087 | N | 18 | 20230727 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | S | 1087 | V | 7 | 20220825 |
| EPI_ISL_19327658 | NSP3 | hCoV-19/Spain/CT-HUGTiP-B3R191/2024 | S | 1087 | A | 48 | 20240806 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | S | 1087 | K | 8 | 20240816 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | S | 1087 | del | 266 | 20240218 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | S | 1087 | D | 1 | 20220726 |
| EPI_ISL_4470306 | NSP3 | hCoV-19/India/MP-NCDC-3509139/2021 | S | 1087 | insstopPXXXXXXXX | 3 | 20210523 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | S | 1087 | L | 6 | 20220103 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | S | 1087 | E | 1 | 20201214 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | S | 1087 | T | 21 | 20230411 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | S | 1087 | I | 36 | 20230209 |
| EPI_ISL_19384249 | NSP3 | hCoV-19/South Korea/KDCA294961/2024 | Y | 1088 | C | 46 | 20240808 |
| EPI_ISL_5049926 | NSP3 | hCoV-19/Spain/CT-LabRefCat-7192775/2021 | Y | 1088 | V | 6 | 20210802 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 1088 | L | 31 | 20230217 |
| EPI_ISL_15104850 | NSP3 | hCoV-19/Venezuela/Por397/2021 | Y | 1088 | insFTEAGVCVSTSGRWVLNND | 1 | 20210401 |
| EPI_ISL_18212344 | NSP3 | hCoV-19/USA/UT-UPHL-230407474501/2023 | Y | 1088 | F | 14 | 20230313 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | Y | 1088 | A | 1 | 20220628 |
| EPI_ISL_10314650 | NSP3 | hCoV-19/Belarus/MA-CRIE-7713246651/2021 | Y | 1088 | stop | 2 | 20210927 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | Y | 1088 | W | 2 | 20220228 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | Y | 1088 | N | 11 | 20230209 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | Y | 1088 | del | 279 | 20240218 |
| EPI_ISL_2376771 | NSP3 | hCoV-19/Greece/196568/2021 | Y | 1088 | insC | 2 | 20210503 |
| EPI_ISL_19447776 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YEHAG/2024 | Y | 1088 | H | 213 | 20240905 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | Y | 1088 | G | 3 | 20220825 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | Y | 1088 | K | 2 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 1088 | S | 22 | 20240816 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | Y | 1088 | I | 60 | 20230411 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | Y | 1088 | D | 3 | 20230415 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | F | 1089 | E | 1 | 20220726 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | F | 1089 | N | 2 | 20220812 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | F | 1089 | stop | 1 | 20220628 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | F | 1089 | insHR | 1 | 20220103 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | F | 1089 | I | 40 | 20221012 |
| EPI_ISL_10914127 | NSP3 | hCoV-19/Germany/HH-RKI-I-598083/2022 | F | 1089 | H | 1 | 20220225 |
| EPI_ISL_17789289 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-26E23-MM00035R/2023 | F | 1089 | Y | 10 | 20230526 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | F | 1089 | L | 49 | 20230925 |
| EPI_ISL_18999974 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-022710/2024 | F | 1089 | V | 9 | 20240304 |
| EPI_ISL_5049926 | NSP3 | hCoV-19/Spain/CT-LabRefCat-7192775/2021 | F | 1089 | G | 1 | 20210802 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | F | 1089 | insV | 1 | 20211220 |
| EPI_ISL_13920417 | NSP3 | hCoV-19/Germany/SH-RKI-I-888881/2022 | F | 1089 | S | 8 | 20220629 |
| EPI_ISL_4530201 | NSP3 | hCoV-19/England/PHEC-3G074G55/2021 | F | 1089 | A | 1 | 20210919 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1089 | P | 1 | 20220210 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | F | 1089 | del | 78 | 20240218 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | F | 1089 | T | 7 | 20220131 |
| EPI_ISL_9588096 | NSP3 | hCoV-19/England/PHEC-4X03FZA3/2021 | F | 1089 | Q | 7 | 20211219 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | F | 1089 | D | 3 | 20220825 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | F | 1089 | C | 13 | 20230401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1089 | K | 1 | 20210318 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | F | 1089 | W | 6 | 20240816 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | T | 1090 | N | 2 | 20230421 |
| EPI_ISL_9270693 | NSP3 | hCoV-19/Pakistan/9655671/2022/2022 | T | 1090 | E | 1 | 20220103 |
| EPI_ISL_17494700 | NSP3 | hCoV-19/Xinjiang/XJCDCWLMQ040/2023 | T | 1090 | A | 13 | 20230330 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | T | 1090 | del | 76 | 20240218 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | T | 1090 | F | 4 | 20220705 |
| EPI_ISL_12582769 | NSP3 | hCoV-19/Turkey/HSGM-G8446/2022 | T | 1090 | P | 1 | 20220401 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | T | 1090 | Y | 5 | 20210310 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | T | 1090 | L | 6 | 20230217 |
| EPI_ISL_10291408 | NSP3 | hCoV-19/Germany/HH-RKI-I-551525/2022 | T | 1090 | stop | 3 | 20220211 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1090 | M | 6 | 20240816 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | T | 1090 | D | 3 | 20220812 |
| EPI_ISL_18584761 | NSP3 | hCoV-19/Slovakia/uvzsr-BA_23_20_00009115/2023 | T | 1090 | S | 41 | 20231017 |
| EPI_ISL_19024715 | NSP3 | hCoV-19/USA/CA-HLX-STM-YTWF6358R/2024 | T | 1090 | K | 29 | 20240306 |
| EPI_ISL_5923086 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-20645/2021 | T | 1090 | Q | 3 | 20211002 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | T | 1090 | H | 12 | 20230217 |
| EPI_ISL_18428214 | NSP3 | hCoV-19/France/GES-IPP23678/2023 | T | 1090 | R | 34 | 20231009 |
| EPI_ISL_19803156 | NSP3 | hCoV-19/France/GES-RELAB-IPP03559/2025 | T | 1090 | I | 487 | 20250306 |
| EPI_ISL_19501171 | NSP3 | hCoV-19/deer/USA/OH-OSU-0068712/2023 | E | 1091 | Q | 42 | 20231128 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | E | 1091 | H | 7 | 20230217 |
| EPI_ISL_16969096 | NSP3 | hCoV-19/England/QEUH-326CA5D7/2023 | E | 1091 | V | 28 | 20230207 |
| EPI_ISL_19731556 | NSP3 | hCoV-19/Spain/CT-HUVH-E529981/2025 | E | 1091 | K | 420 | 20250206 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | E | 1091 | insLR | 1 | 20220224 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | E | 1091 | C | 2 | 20220726 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | E | 1091 | P | 2 | 20230415 |
| EPI_ISL_4530175 | NSP3 | hCoV-19/England/PHEC-3G072G79/2021 | E | 1091 | insS | 1 | 20210919 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | E | 1091 | S | 36 | 20230411 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | E | 1091 | R | 17 | 20230217 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | E | 1091 | L | 3 | 20220812 |
| EPI_ISL_19809846 | NSP3 | hCoV-19/USA/NY-PRL-250325_81F03/2025 | E | 1091 | D | 297 | 20250310 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | E | 1091 | T | 15 | 20230209 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | E | 1091 | insI | 5 | 20220131 |
| EPI_ISL_19586218 | NSP3 | hCoV-19/USA/NY-URMC-P0S1S649-1/2024 | E | 1091 | G | 176 | 20241029 |
| EPI_ISL_2304051 | NSP3 | hCoV-19/India/MH-NCCS-52890/2021 | E | 1091 | Y | 2 | 20210305 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | E | 1091 | N | 7 | 20230217 |
| EPI_ISL_19532048 | NSP3 | hCoV-19/France/HDF-RELAB-IPP12023/2024 | E | 1091 | A | 6694 | 20241015 |
| EPI_ISL_8780887 | NSP3 | hCoV-19/England/NEWC-31B99F2/2022 | E | 1091 | Z | 5 | 20220107 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | E | 1091 | del | 75 | 20240218 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 1091 | F | 1 | 20210318 |
| EPI_ISL_17988415 | NSP3 | hCoV-19/Spain/GA-SCQ-174289/2023 | E | 1091 | stop | 10 | 20230501 |
| EPI_ISL_10910393 | NSP3 | hCoV-19/Germany/HH-RKI-I-592868/2022 | E | 1091 | I | 1 | 20220225 |
| EPI_ISL_16102503 | NSP3 | hCoV-19/USA/CA-SEARCH-213266/2022 | Q | 1092 | H | 8 | 20220925 |
| EPI_ISL_19031160 | NSP3 | hCoV-19/South Korea/KDCA289430/2024 | Q | 1092 | R | 12 | 20240302 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1092 | G | 1 | 20220210 |
| EPI_ISL_15292695 | NSP3 | hCoV-19/India/GA-NCCS-564088184/2021 | Q | 1092 | T | 31 | 20211105 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Q | 1092 | S | 7 | 20240816 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | Q | 1092 | F | 1 | 20220109 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | Q | 1092 | P | 9 | 20220729 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | Q | 1092 | Y | 2 | 20220825 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | Q | 1092 | E | 2 | 20220224 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | Q | 1092 | M | 1 | 20210726 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | Q | 1092 | stop | 8 | 20220124 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | Q | 1092 | V | 2 | 20220726 |
| EPI_ISL_7637500 | NSP3 | hCoV-19/Greece/311868/2021 | Q | 1092 | I | 1 | 20211113 |
| EPI_ISL_11992103 | NSP3 | hCoV-19/Germany/BY-LGL-666c7a17-6539-40bc-8214-c19fe92996d0/2022 | Q | 1092 | Z | 1 | 20220316 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | Q | 1092 | D | 1 | 20230415 |
| EPI_ISL_9588096 | NSP3 | hCoV-19/England/PHEC-4X03FZA3/2021 | Q | 1092 | A | 16 | 20211219 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | Q | 1092 | del | 89 | 20240218 |
| EPI_ISL_5923086 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-20645/2021 | Q | 1092 | N | 8 | 20211002 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | Q | 1092 | K | 16 | 20230217 |
| EPI_ISL_19042034 | NSP3 | hCoV-19/Lithuania/MB231123_0132/2023 | Q | 1092 | L | 9 | 20231122 |
| EPI_ISL_9270693 | NSP3 | hCoV-19/Pakistan/9655671/2022/2022 | Q | 1092 | C | 2 | 20220103 |
| EPI_ISL_19700461 | NSP3 | hCoV-19/Israel/ICH-741227247/2025 | P | 1093 | L | 55 | 20250113 |
| EPI_ISL_19800024 | NSP3 | hCoV-19/USA/TX-HMH-M-147380/2025 | P | 1093 | Q | 16 | 20250130 |
| EPI_ISL_17372502 | NSP3 | hCoV-19/India/TN-SPHL-2951/2023 | P | 1093 | T | 29 | 20230310 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | P | 1093 | Y | 2 | 20220628 |
| EPI_ISL_3134170 | NSP3 | hCoV-19/USA/TX-ABS2107130105/2021 | P | 1093 | G | 1 | 20210713 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | P | 1093 | I | 33 | 20230415 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | P | 1093 | S | 71 | 20230411 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | P | 1093 | V | 4 | 20230209 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | P | 1093 | insstop | 1 | 20220227 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | P | 1093 | A | 6 | 20220705 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | P | 1093 | K | 4 | 20230421 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 1093 | E | 4 | 20240816 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | P | 1093 | F | 1 | 20201214 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | P | 1093 | del | 99 | 20240218 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | P | 1093 | R | 6 | 20221204 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | P | 1093 | stop | 2 | 20210319 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | I | 1094 | K | 1 | 20210521 |
| EPI_ISL_18936192 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00182/2023 | I | 1094 | stop | 2 | 20230424 |
| EPI_ISL_19800024 | NSP3 | hCoV-19/USA/TX-HMH-M-147380/2025 | I | 1094 | L | 51 | 20250130 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | I | 1094 | del | 95 | 20240218 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | I | 1094 | R | 1 | 20220109 |
| EPI_ISL_18354022 | NSP3 | hCoV-19/South Korea/KDCA265463/2023 | I | 1094 | N | 53 | 20230909 |
| EPI_ISL_19742651 | NSP3 | hCoV-19/Chile/ML-11486/2025 | I | 1094 | T | 263 | 20250205 |
| EPI_ISL_16231963 | NSP3 | hCoV-19/France/ARA-HCL022203107801/2022 | I | 1094 | M | 5 | 20221205 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | I | 1094 | S | 34 | 20240816 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | I | 1094 | E | 1 | 20230415 |
| EPI_ISL_19820290 | NSP3 | hCoV-19/USA/NY-PRL-250401_82H04/2025 | I | 1094 | V | 2315 | 20250316 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | I | 1094 | D | 1 | 20220812 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1094 | C | 1 | 20220210 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | I | 1094 | insstop | 1 | 20210730 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1094 | Y | 1 | 20210318 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | I | 1094 | G | 2 | 20220726 |
| EPI_ISL_19506342 | NSP3 | hCoV-19/Australia/TAS008116/2024 | I | 1094 | F | 16 | 20240813 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | I | 1094 | P | 2 | 20230421 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | D | 1095 | S | 8 | 20220729 |
| EPI_ISL_11355408 | NSP3 | hCoV-19/France/GES-ChNa-210059743501/2021 | D | 1095 | stop | 10 | 20210716 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | D | 1095 | del | 104 | 20240218 |
| EPI_ISL_14846541 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-138/2022 | D | 1095 | V | 5 | 20220423 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | D | 1095 | C | 3 | 20220721 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | D | 1095 | Q | 36 | 20230411 |
| EPI_ISL_18452245 | NSP3 | hCoV-19/Sweden/AB-01_SE100_23CS101997/2023 | D | 1095 | B | 15 | 20231012 |
| EPI_ISL_19800024 | NSP3 | hCoV-19/USA/TX-HMH-M-147380/2025 | D | 1095 | I | 49 | 20250130 |
| EPI_ISL_12999226 | NSP3 | hCoV-19/Russia/KIR-CRIE-7730596639/2022 | D | 1095 | A | 1 | 20220212 |
| EPI_ISL_19485990 | NSP3 | hCoV-19/South Korea/KDCA296025/2024 | D | 1095 | H | 4 | 20240923 |
| EPI_ISL_19825377 | NSP3 | hCoV-19/USA/NM-NMDOH-2025007412/2025 | D | 1095 | G | 560 | 20250223 |
| EPI_ISL_19819862 | NSP3 | hCoV-19/Spain/AS-HUCA-232523861/2025 | D | 1095 | Y | 10 | 20250324 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | D | 1095 | insQ | 1 | 20210520 |
| EPI_ISL_19513328 | NSP3 | hCoV-19/Sweden/G-24-579184/2024 | D | 1095 | N | 33 | 20241001 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | D | 1095 | F | 2 | 20210726 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | D | 1095 | T | 7 | 20230415 |
| EPI_ISL_15306207 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-116080/2022 | D | 1095 | L | 5 | 20220920 |
| EPI_ISL_11744568 | NSP3 | hCoV-19/USA/NY-PRL-2022_0323_00K23/2022 | D | 1095 | E | 9 | 20220320 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | L | 1096 | S | 5 | 20220628 |
| EPI_ISL_18980991 | NSP3 | hCoV-19/USA/TX-HMH-M-140059/2024 | L | 1096 | F | 29 | 20240227 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | L | 1096 | V | 5 | 20240816 |
| EPI_ISL_4311691 | NSP3 | hCoV-19/England/PHEC-Z304Z546/2021 | L | 1096 | K | 2 | 20210909 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | L | 1096 | M | 2 | 20230209 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | L | 1096 | Q | 1 | 20220224 |
| EPI_ISL_19079681 | NSP3 | hCoV-19/South Korea/KDCA291235/2024 | L | 1096 | H | 3 | 20240325 |
| EPI_ISL_19623988 | NSP3 | hCoV-19/Japan/FR302-1555/2024 | L | 1096 | I | 244 | 20241108 |
| EPI_ISL_16534651 | NSP3 | hCoV-19/Singapore/R3MR36/2023 | L | 1096 | J | 12 | 20230105 |
| EPI_ISL_13191844 | NSP3 | hCoV-19/USA/FL-BPHL-8736/2022 | L | 1096 | P | 8 | 20220509 |
| EPI_ISL_3154871 | NSP3 | hCoV-19/Spain/CT-HUJ23-11808/2021 | L | 1096 | insD | 1 | 20210726 |
| EPI_ISL_14584702 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16475/2022 | L | 1096 | R | 3 | 20220802 |
| EPI_ISL_18936153 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00093/2023 | L | 1096 | C | 2 | 20230415 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | L | 1096 | del | 106 | 20240218 |
| EPI_ISL_15306207 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-116080/2022 | L | 1096 | Y | 9 | 20220920 |
| EPI_ISL_12955648 | NSP3 | hCoV-19/Russia/MOW-CRIE-7732916557/2022 | L | 1096 | N | 2 | 20220222 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | L | 1096 | E | 2 | 20220812 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | L | 1096 | T | 4 | 20220825 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | L | 1096 | stop | 5 | 20221031 |
| EPI_ISL_19342161 | NSP3 | hCoV-19/Jordan/MOH-CPHL1043/2024 | V | 1097 | L | 130 | 20240213 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | V | 1097 | W | 1 | 20220721 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | V | 1097 | insK | 1 | 20210525 |
| EPI_ISL_11672127 | NSP3 | hCoV-19/Germany/HH-RKI-I-684727/2022 | V | 1097 | G | 9 | 20220319 |
| EPI_ISL_8517240 | NSP3 | hCoV-19/England/PHEC-3Z079Z65/2021 | V | 1097 | K | 2 | 20211216 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | V | 1097 | P | 2 | 20220628 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | V | 1097 | Y | 6 | 20210817 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | V | 1097 | C | 2 | 20220112 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | V | 1097 | T | 3 | 20220825 |
| EPI_ISL_15306207 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-116080/2022 | V | 1097 | Q | 35 | 20220920 |
| EPI_ISL_11650847 | NSP3 | hCoV-19/Germany/HH-RKI-I-669887/2022 | V | 1097 | stop | 3 | 20220319 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | V | 1097 | del | 104 | 20240816 |
| EPI_ISL_18110478 | NSP3 | hCoV-19/USA/MS-MSPHL-0296/2023 | V | 1097 | E | 5 | 20230726 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | V | 1097 | D | 1 | 20210521 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | V | 1097 | insLYQ | 12 | 20230411 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | V | 1097 | S | 7 | 20221031 |
| EPI_ISL_19613106 | NSP3 | hCoV-19/Germany/BY-MVP-000026111/2024 | V | 1097 | I | 1862 | 20241126 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | V | 1097 | M | 1 | 20210812 |
| EPI_ISL_18839559 | NSP3 | hCoV-19/env/Ukraine/81020/2023 | V | 1097 | A | 48 | 20230928 |
| EPI_ISL_19610898 | NSP3 | hCoV-19/Spain/GA-CHUAC-13036/2024 | P | 1098 | S | 493 | 20241201 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | P | 1098 | insFII | 1 | 20210118 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | P | 1098 | C | 13 | 20221031 |
| EPI_ISL_19656740 | NSP3 | hCoV-19/Germany/BW-RKI-I-1146829/2024 | P | 1098 | Q | 142 | 20241203 |
| EPI_ISL_19600734 | NSP3 | hCoV-19/USA/CA-CDPH-500143475/2024 | P | 1098 | L | 119 | 20240926 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 1098 | del | 95 | 20240816 |
| EPI_ISL_18511357 | NSP3 | hCoV-19/South Korea/KDCA272023/2023 | P | 1098 | T | 58 | 20231014 |
| EPI_ISL_10230212 | NSP3 | hCoV-19/USA/CA-CDC-ASC210550432/2022 | P | 1098 | A | 9 | 20220207 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | P | 1098 | insNstopSC | 1 | 20211015 |
| EPI_ISL_19101226 | NSP3 | hCoV-19/Burkina Faso/CHUSS_16062/2022 | P | 1098 | D | 1 | 20220823 |
| EPI_ISL_17641442 | NSP3 | hCoV-19/Canada/QC-L00610376001/2023 | P | 1098 | R | 9 | 20230424 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | P | 1098 | I | 3 | 20220227 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | P | 1098 | insstop | 1 | 20221226 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | P | 1098 | V | 1 | 20210118 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1098 | G | 1 | 20210318 |
| EPI_ISL_11355411 | NSP3 | hCoV-19/France/GES-ChNa-210059746501/2021 | P | 1098 | F | 2 | 20210716 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | N | 1099 | C | 1 | 20230421 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | N | 1099 | stop | 1 | 20210526 |
| EPI_ISL_12955763 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748456/2022 | N | 1099 | P | 1 | 20220227 |
| EPI_ISL_19721398 | NSP3 | hCoV-19/Italy/LOM-UNIBS-01134699/2025 | N | 1099 | T | 28 | 20250113 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | N | 1099 | M | 3 | 20211018 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | N | 1099 | V | 1 | 20220812 |
| EPI_ISL_13379471 | NSP3 | hCoV-19/Germany/NW-RKI-I-864458/2022 | N | 1099 | Q | 1 | 20220319 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | N | 1099 | del | 90 | 20240816 |
| EPI_ISL_19783262 | NSP3 | hCoV-19/USA/MT-MTPHL-4166388/2025 | N | 1099 | D | 130 | 20250225 |
| EPI_ISL_16307943 | NSP3 | hCoV-19/USA/TX-CDC-STM-64G3SC2KJ/2022 | N | 1099 | I | 5 | 20221212 |
| EPI_ISL_19808319 | NSP3 | hCoV-19/Canada/ON-PHL-202504680/2025 | N | 1099 | S | 427 | 20250305 |
| EPI_ISL_17790323 | NSP3 | hCoV-19/Singapore/R38MR70/2023 | N | 1099 | B | 6 | 20230602 |
| EPI_ISL_19389370 | NSP3 | hCoV-19/Spain/MC-HCUVA-89170044/2024 | N | 1099 | H | 78 | 20240730 |
| EPI_ISL_19382242 | NSP3 | hCoV-19/USA/NM-NMDOH-024982/2024 | N | 1099 | Y | 25 | 20240730 |
| EPI_ISL_5934824 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689492_CAM_IZSM_COLLI_TIGEM/2021 | N | 1099 | insstopSCN | 1 | 20211015 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | N | 1099 | R | 1 | 20210525 |
| EPI_ISL_19507701 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10133555/2024 | N | 1099 | K | 132 | 20241013 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | Q | 1100 | insLIC | 29 | 20210419 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 1100 | Y | 1 | 20210318 |
| EPI_ISL_19819956 | NSP3 | hCoV-19/Canada/ON-HSC-202501503-v1/2025 | Q | 1100 | R | 459 | 20250320 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | Q | 1100 | H | 48 | 20230411 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | Q | 1100 | A | 1 | 20210521 |
| EPI_ISL_13343595 | NSP3 | hCoV-19/Italy/EMR_AUSLRomagna_C057-22-03/2022 | Q | 1100 | P | 15 | 20220607 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | Q | 1100 | T | 3 | 20220628 |
| EPI_ISL_13379471 | NSP3 | hCoV-19/Germany/NW-RKI-I-864458/2022 | Q | 1100 | I | 3 | 20220319 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Q | 1100 | stop | 12 | 20230217 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | Q | 1100 | V | 4 | 20230421 |
| EPI_ISL_19770381 | NSP3 | hCoV-19/Spain/AS-HUCA-232514718/2025 | Q | 1100 | K | 286 | 20250219 |
| EPI_ISL_19101226 | NSP3 | hCoV-19/Burkina Faso/CHUSS_16062/2022 | Q | 1100 | S | 5 | 20220823 |
| EPI_ISL_12005434 | NSP3 | hCoV-19/Thailand/NIC_TRG_13944/2022 | Q | 1100 | D | 1 | 20220315 |
| EPI_ISL_15292695 | NSP3 | hCoV-19/India/GA-NCCS-564088184/2021 | Q | 1100 | insstopSC | 1 | 20211105 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | Q | 1100 | M | 1 | 20230209 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | Q | 1100 | W | 2 | 20220227 |
| EPI_ISL_19374231 | NSP3 | hCoV-19/Guatemala/0931-DLNS/2024 | Q | 1100 | L | 519 | 20240723 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Q | 1100 | del | 83 | 20240816 |
| EPI_ISL_19110276 | NSP3 | hCoV-19/Tibet/XZCDC_0023/2024 | Q | 1100 | E | 9 | 20240419 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | Q | 1100 | N | 6 | 20220825 |
| EPI_ISL_8517240 | NSP3 | hCoV-19/England/PHEC-3Z079Z65/2021 | P | 1101 | E | 1 | 20211216 |
| EPI_ISL_18886832 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019713_01/2023 | P | 1101 | V | 5 | 20231026 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | P | 1101 | I | 21 | 20230411 |
| EPI_ISL_17308157 | NSP3 | hCoV-19/USA/CA-SC-278381/2023 | P | 1101 | L | 107 | 20230316 |
| EPI_ISL_17230136 | NSP3 | hCoV-19/South Korea/KDCA220707/2023 | P | 1101 | Q | 13 | 20230304 |
| EPI_ISL_19101226 | NSP3 | hCoV-19/Burkina Faso/CHUSS_16062/2022 | P | 1101 | G | 3 | 20220823 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | P | 1101 | K | 3 | 20220628 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1101 | N | 2 | 20220210 |
| EPI_ISL_19742309 | NSP3 | hCoV-19/South Korea/KDCA296951/2025 | P | 1101 | S | 205 | 20250121 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | P | 1101 | M | 3 | 20220227 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | P | 1101 | insVL | 2 | 20220227 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | P | 1101 | insTY | 1 | 20221031 |
| EPI_ISL_14676348 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16866/2022 | P | 1101 | R | 8 | 20220726 |
| EPI_ISL_8806252 | NSP3 | hCoV-19/India/MH-NCCS-2748700641659/2021 | P | 1101 | stop | 1 | 20211018 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | P | 1101 | H | 6 | 20220627 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | P | 1101 | insN | 1 | 20221206 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | P | 1101 | F | 1 | 20201214 |
| EPI_ISL_12005434 | NSP3 | hCoV-19/Thailand/NIC_TRG_13944/2022 | P | 1101 | A | 3 | 20220315 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 1101 | del | 82 | 20240816 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | P | 1101 | T | 41 | 20230209 |
| EPI_ISL_19506105 | NSP3 | hCoV-19/Austria/MUW_1753696/2024 | Y | 1102 | F | 81 | 20240910 |
| EPI_ISL_12020910 | NSP3 | hCoV-19/France/IDF-ERFB-2068643257/2021 | Y | 1102 | insV | 1 | 20210721 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1102 | T | 6 | 20220210 |
| EPI_ISL_15900422 | NSP3 | hCoV-19/Germany/SN-RKI-I-1028995/2022 | Y | 1102 | P | 2 | 20220718 |
| EPI_ISL_19101226 | NSP3 | hCoV-19/Burkina Faso/CHUSS_16062/2022 | Y | 1102 | I | 6 | 20220823 |
| EPI_ISL_15473936 | NSP3 | hCoV-19/Italy/LOM-ASST-LS14/2022 | Y | 1102 | stop | 8 | 20221004 |
| EPI_ISL_19831990 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YR6FK/2025 | Y | 1102 | H | 4351 | 20250323 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | Y | 1102 | V | 4 | 20220721 |
| EPI_ISL_18936183 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00161/2023 | Y | 1102 | G | 2 | 20230421 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | Y | 1102 | Q | 22 | 20230411 |
| EPI_ISL_19342165 | NSP3 | hCoV-19/Jordan/MOH-CPHL1178/2024 | Y | 1102 | del | 87 | 20240220 |
| EPI_ISL_19820042 | NSP3 | hCoV-19/Canada/ON-PHL-202504966/2025 | Y | 1102 | C | 1295 | 20250318 |
| EPI_ISL_7508606 | NSP3 | hCoV-19/USA/CA-CSMC410/2020 | Y | 1102 | insTLSL | 1 | 20200803 |
| EPI_ISL_15739772 | NSP3 | hCoV-19/Sweden/1602614064/2022 | Y | 1102 | D | 7 | 20221101 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | Y | 1102 | W | 1 | 20210525 |
| EPI_ISL_19701203 | NSP3 | hCoV-19/England/CLIMB-CM7YFTT8/2025 | Y | 1102 | S | 449 | 20250108 |
| EPI_ISL_19628993 | NSP3 | hCoV-19/USA/CA-CDPH-500143355/2024 | Y | 1102 | N | 44 | 20240918 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | Y | 1102 | K | 32 | 20220728 |
| EPI_ISL_19620035 | NSP3 | hCoV-19/USA/TX-PHH-24V-323G0246/2024 | P | 1103 | T | 1944 | 20241118 |
| EPI_ISL_19824629 | NSP3 | hCoV-19/Wales/CLIMB-CM7YKFMY/2025 | P | 1103 | S | 16458 | 20250328 |
| EPI_ISL_14137995 | NSP3 | hCoV-19/Japan/PG-274308/2022 | P | 1103 | insCRSQ | 1 | 20220628 |
| EPI_ISL_17530377 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1756/2023 | P | 1103 | del | 76 | 20230411 |
| EPI_ISL_19751130 | NSP3 | hCoV-19/Spain/MC-HCUVA-70024045/2025 | P | 1103 | Q | 8827 | 20250122 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | P | 1103 | G | 1 | 20230209 |
| EPI_ISL_19826021 | NSP3 | hCoV-19/Singapore/Y25R15MSC82/2025 | P | 1103 | L | 15662 | 20250408 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | P | 1103 | Y | 3 | 20220728 |
| EPI_ISL_6481656 | NSP3 | hCoV-19/USA/GA-CDC-4314317-001/2021 | P | 1103 | K | 7 | 20210906 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | P | 1103 | C | 1 | 20210315 |
| EPI_ISL_19611509 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-04L-MM00075R/2024 | P | 1103 | A | 58 | 20241204 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | P | 1103 | E | 2 | 20220721 |
| EPI_ISL_18489080 | NSP3 | hCoV-19/Philippines/PH-VSMMC-7-224/2023 | P | 1103 | R | 23 | 20231004 |
| EPI_ISL_10924492 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11817/2022 | P | 1103 | V | 17 | 20220228 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | P | 1103 | I | 4 | 20221206 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | N | 1104 | P | 1 | 20210521 |
| EPI_ISL_9672781 | NSP3 | hCoV-19/Finland/THL-202202475/2022 | N | 1104 | I | 6 | 20220107 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | N | 1104 | L | 2 | 20220628 |
| EPI_ISL_17530377 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1756/2023 | N | 1104 | del | 67 | 20230411 |
| EPI_ISL_17502972 | NSP3 | hCoV-19/Mongolia/5277/2023 | N | 1104 | B | 6 | 20230318 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | N | 1104 | F | 1 | 20220109 |
| EPI_ISL_19615624 | NSP3 | hCoV-19/USA/OH-UM-G25X74X2/2024 | N | 1104 | D | 152 | 20241110 |
| EPI_ISL_18520763 | NSP3 | hCoV-19/Japan/PG-582472/2023 | N | 1104 | Y | 23 | 20231101 |
| EPI_ISL_19805693 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U759-1/2025 | N | 1104 | K | 514 | 20250310 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1104 | E | 1 | 20210318 |
| EPI_ISL_17018513 | NSP3 | hCoV-19/Spain/AS-HUCA-232308987/2023 | N | 1104 | insXXXXX | 1 | 20230213 |
| EPI_ISL_19784186 | NSP3 | hCoV-19/USA/NY-CDC-LC1134586/2025 | N | 1104 | S | 732 | 20250307 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | N | 1104 | T | 75 | 20230925 |
| EPI_ISL_19478432 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YKGZR/2024 | N | 1104 | H | 64 | 20241002 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | N | 1104 | Q | 28 | 20230411 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | N | 1104 | G | 4 | 20221204 |
| EPI_ISL_2546189 | NSP3 | hCoV-19/India/MH-IGIB-NIV-INSACOG-GSEQ-1653/2021 | N | 1104 | R | 1 | 20210310 |
| EPI_ISL_9303896 | NSP3 | hCoV-19/Brazil/SP-IB_147945/2022 | A | 1105 | K | 5 | 20220110 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | A | 1105 | Y | 1 | 20210315 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | A | 1105 | P | 21 | 20230217 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | A | 1105 | Q | 11 | 20220627 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | A | 1105 | H | 2 | 20220810 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | A | 1105 | N | 1 | 20210622 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | A | 1105 | insN | 1 | 20220721 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | A | 1105 | I | 38 | 20230401 |
| EPI_ISL_19833201 | NSP3 | hCoV-19/Poland/Kce-48/2025 | A | 1105 | T | 4813 | 20250411 |
| EPI_ISL_19384685 | NSP3 | hCoV-19/Hubei/HCDC-JZ6307/2024 | A | 1105 | G | 5 | 20240730 |
| EPI_ISL_19831550 | NSP3 | hCoV-19/Germany/SH-RKI-I-1148031/2025 | A | 1105 | V | 3345 | 20250319 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | A | 1105 | L | 3 | 20221204 |
| EPI_ISL_13884307 | NSP3 | hCoV-19/Netherlands/NH-AUMC-024771/2022 | A | 1105 | E | 60 | 20220704 |
| EPI_ISL_17530377 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1756/2023 | A | 1105 | del | 61 | 20230411 |
| EPI_ISL_19424583 | NSP3 | hCoV-19/Japan/FR001-0287/2024 | A | 1105 | S | 413 | 20240912 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | A | 1105 | R | 9 | 20230401 |
| EPI_ISL_19698594 | NSP3 | hCoV-19/Greece/PHLnetwork_6125/2024 | S | 1106 | R | 355 | 20241101 |
| EPI_ISL_17530377 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1756/2023 | S | 1106 | del | 46 | 20230411 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | S | 1106 | A | 5 | 20220627 |
| EPI_ISL_19833204 | NSP3 | hCoV-19/Poland/Kce-51/2025 | S | 1106 | G | 824 | 20250411 |
| EPI_ISL_5596884 | NSP3 | hCoV-19/Cameroon/CERI-NPHL-K026058/2021 | S | 1106 | D | 1 | 20210920 |
| EPI_ISL_19754504 | NSP3 | hCoV-19/USA/NE-RP251522/2025 | S | 1106 | I | 565 | 20250216 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | S | 1106 | stop | 3 | 20210809 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | S | 1106 | Q | 1 | 20220112 |
| EPI_ISL_14269757 | NSP3 | hCoV-19/USA/MD-CDC-QDX39167449/2022 | S | 1106 | C | 62 | 20220718 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | S | 1106 | M | 1 | 20220628 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | S | 1106 | F | 1 | 20210315 |
| EPI_ISL_17743727 | NSP3 | hCoV-19/USA/MN-MDH-35486/2023 | S | 1106 | T | 27 | 20230509 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1106 | Y | 1 | 20220210 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | S | 1106 | K | 16 | 20230401 |
| EPI_ISL_19775831 | NSP3 | hCoV-19/USA/CO-CDPHE-43093591/2025 | S | 1106 | N | 702 | 20250219 |
| EPI_ISL_12999276 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748571/2022 | S | 1106 | H | 2 | 20220227 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | S | 1106 | V | 1 | 20221204 |
| EPI_ISL_12955763 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748456/2022 | S | 1106 | P | 2 | 20220227 |
| EPI_ISL_3010069 | NSP3 | hCoV-19/Spain/CT-HUJ23-17488/2021 | S | 1106 | L | 2 | 20210712 |
| EPI_ISL_18505850 | NSP3 | hCoV-19/Xinjiang/XJCDCTLF-134/2023 | F | 1107 | C | 47 | 20231013 |
| EPI_ISL_19774579 | NSP3 | hCoV-19/Slovenia/1002843/2025 | F | 1107 | S | 105 | 20250107 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1107 | G | 1 | 20220210 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | F | 1107 | Q | 2 | 20220810 |
| EPI_ISL_10511963 | NSP3 | hCoV-19/Thailand/NIC_BKK_SEQ2040/2022 | F | 1107 | T | 3 | 20220105 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | F | 1107 | del | 52 | 20230418 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | F | 1107 | N | 5 | 20240816 |
| EPI_ISL_19767640 | NSP3 | hCoV-19/South Korea/KDCA297008/2025 | F | 1107 | L | 156 | 20250203 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | F | 1107 | P | 1 | 20210521 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | F | 1107 | I | 41 | 20230411 |
| EPI_ISL_3010069 | NSP3 | hCoV-19/Spain/CT-HUJ23-17488/2021 | F | 1107 | insstopE | 1 | 20210712 |
| EPI_ISL_18531515 | NSP3 | hCoV-19/Italy/LOM-69518822/2023 | F | 1107 | V | 297 | 20231108 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1107 | D | 1 | 20201214 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | F | 1107 | K | 39 | 20230401 |
| EPI_ISL_9303896 | NSP3 | hCoV-19/Brazil/SP-IB_147945/2022 | F | 1107 | W | 2 | 20220110 |
| EPI_ISL_12955648 | NSP3 | hCoV-19/Russia/MOW-CRIE-7732916557/2022 | F | 1107 | stop | 1 | 20220222 |
| EPI_ISL_19753779 | NSP3 | hCoV-19/France/ARA-RELAB-HCL725000025201/2025 | F | 1107 | Y | 311 | 20250128 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | F | 1107 | A | 1 | 20220112 |
| EPI_ISL_9303896 | NSP3 | hCoV-19/Brazil/SP-IB_147945/2022 | D | 1108 | stop | 3 | 20220110 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | D | 1108 | S | 25 | 20230217 |
| EPI_ISL_19792166 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGJFI/2025 | D | 1108 | N | 245 | 20250225 |
| EPI_ISL_7767964 | NSP3 | hCoV-19/Russia/KDA-RII-MH37864S/2021 | D | 1108 | P | 1 | 20211025 |
| EPI_ISL_17786309 | NSP3 | hCoV-19/Sweden/W-49296113LX/2023 | D | 1108 | Y | 433 | 20230515 |
| EPI_ISL_19786314 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56573/2025 | D | 1108 | G | 669 | 20250301 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | D | 1108 | T | 3 | 20220810 |
| EPI_ISL_18921297 | NSP3 | hCoV-19/USA/NJ-CDC-LC1096404/2024 | D | 1108 | B | 14 | 20240207 |
| EPI_ISL_10511963 | NSP3 | hCoV-19/Thailand/NIC_BKK_SEQ2040/2022 | D | 1108 | F | 1 | 20220105 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | D | 1108 | L | 6 | 20221204 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | D | 1108 | C | 6 | 20240816 |
| EPI_ISL_16453616 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-121839/2022 | D | 1108 | E | 18 | 20221230 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | D | 1108 | insIIL | 8 | 20211227 |
| EPI_ISL_19348440 | NSP3 | hCoV-19/Japan/FR302-1057/2024 | D | 1108 | A | 59 | 20240725 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | D | 1108 | del | 62 | 20230418 |
| EPI_ISL_16937862 | NSP3 | hCoV-19/England/QEUH-326C2690/2023 | D | 1108 | H | 83 | 20230203 |
| EPI_ISL_17989354 | NSP3 | hCoV-19/Nepal/NPHL-S-2460/2023 | D | 1108 | insL | 7 | 20230409 |
| EPI_ISL_15467085 | NSP3 | hCoV-19/Denmark/DCGC-598380/2022 | D | 1108 | insKWEA | 1 | 20221017 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | D | 1108 | R | 48 | 20230401 |
| EPI_ISL_2759906 | NSP3 | hCoV-19/Germany/NW-RKI-I-181786/2021 | D | 1108 | insI | 1 | 20210617 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | D | 1108 | I | 21 | 20230411 |
| EPI_ISL_14943802 | NSP3 | hCoV-19/USA/CA-Curative-514781/2022 | D | 1108 | V | 30 | 20220903 |
| EPI_ISL_12607710 | NSP3 | hCoV-19/Egypt/CPHL-21859/2022 | N | 1109 | M | 3 | 20220312 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | N | 1109 | K | 63 | 20230401 |
| EPI_ISL_19380508 | NSP3 | hCoV-19/Canada/BC-BCCDC-728351/2024 | N | 1109 | del | 250 | 20240816 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | N | 1109 | H | 5 | 20250116 |
| EPI_ISL_10630964 | NSP3 | hCoV-19/India/KA-CBR-1602UDP024/2022 | N | 1109 | insNFCALILA | 1 | 20220201 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | N | 1109 | V | 4 | 20220721 |
| EPI_ISL_18973179 | NSP3 | hCoV-19/Brazil/RS-LMM75630/2023 | N | 1109 | S | 113 | 20231025 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | N | 1109 | A | 1 | 20220109 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | N | 1109 | I | 14 | 20220627 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | N | 1109 | T | 15 | 20240816 |
| EPI_ISL_19828186 | NSP3 | hCoV-19/Australia/QLD0x0154E1/2025 | N | 1109 | D | 55 | 20250401 |
| EPI_ISL_17148741 | NSP3 | hCoV-19/Canada/BC-BCCDC-557101/2022 | N | 1109 | B | 6 | 20221116 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | N | 1109 | stop | 12 | 20230401 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | N | 1109 | Q | 3 | 20220810 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | N | 1109 | L | 8 | 20230411 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | N | 1109 | G | 5 | 20220131 |
| EPI_ISL_16358940 | NSP3 | hCoV-19/Spain/PV-HUD-96388477/2022 | N | 1109 | Y | 6 | 20221213 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1109 | R | 2 | 20220210 |
| EPI_ISL_13765801 | NSP3 | hCoV-19/Australia/NSW-ICPMR-28877/2022 | F | 1110 | Y | 13 | 20220630 |
| EPI_ISL_17724802 | NSP3 | hCoV-19/Singapore/R34MR123/2023 | F | 1110 | V | 12 | 20230518 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | F | 1110 | L | 113 | 20250116 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | F | 1110 | insstopVCMstopstop | 3 | 20230401 |
| EPI_ISL_16100647 | NSP3 | hCoV-19/France/PDL-LBZCentre-CF2210240216/2022 | F | 1110 | C | 2 | 20221024 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | F | 1110 | del | 61 | 20230418 |
| EPI_ISL_19380508 | NSP3 | hCoV-19/Canada/BC-BCCDC-728351/2024 | F | 1110 | I | 211 | 20240816 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | F | 1110 | R | 14 | 20230217 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | F | 1110 | S | 16 | 20230411 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | F | 1110 | stop | 2 | 20210805 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | F | 1110 | T | 3 | 20220109 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | F | 1110 | K | 1 | 20220628 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | F | 1110 | W | 2 | 20230117 |
| EPI_ISL_5532932 | NSP3 | hCoV-19/USA/WA-CDC-UW21101223658/2021 | F | 1110 | N | 1 | 20211012 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | F | 1110 | D | 1 | 20220228 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | F | 1110 | A | 2 | 20220810 |
| EPI_ISL_9303896 | NSP3 | hCoV-19/Brazil/SP-IB_147945/2022 | F | 1110 | G | 1 | 20220110 |
| EPI_ISL_18213903 | NSP3 | hCoV-19/South Korea/KDCA259532/2023 | K | 1111 | T | 21 | 20230807 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | K | 1111 | stop | 13 | 20220729 |
| EPI_ISL_19674308 | NSP3 | hCoV-19/South Korea/KDCA296694/2024 | K | 1111 | R | 681 | 20241221 |
| EPI_ISL_17989354 | NSP3 | hCoV-19/Nepal/NPHL-S-2460/2023 | K | 1111 | Y | 21 | 20230409 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | K | 1111 | del | 65 | 20230418 |
| EPI_ISL_15780820 | NSP3 | hCoV-19/Switzerland/ZH-UZH-IMV-3ba672bd/2022 | K | 1111 | M | 5 | 20221024 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | K | 1111 | insstopFstopVCMstopstopY | 35 | 20230401 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | K | 1111 | insstop | 2 | 20210114 |
| EPI_ISL_12607710 | NSP3 | hCoV-19/Egypt/CPHL-21859/2022 | K | 1111 | V | 4 | 20220312 |
| EPI_ISL_10509669 | NSP3 | hCoV-19/Thailand/NIC_SNI_SEQ2740/2022 | K | 1111 | W | 1 | 20220105 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | K | 1111 | I | 3 | 20220728 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1111 | E | 24 | 20240816 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | K | 1111 | L | 16 | 20230411 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | K | 1111 | F | 2 | 20211015 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1111 | Q | 7 | 20230209 |
| EPI_ISL_19304770 | NSP3 | hCoV-19/USA/CO-CDPHE-42054249/2024 | K | 1111 | N | 309 | 20240707 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 1111 | S | 11 | 20250116 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1111 | G | 1 | 20220210 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | F | 1112 | insYAstopstopYQ | 1 | 20210806 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | F | 1112 | insCMstopstopYQ | 1 | 20210801 |
| EPI_ISL_19101226 | NSP3 | hCoV-19/Burkina Faso/CHUSS_16062/2022 | F | 1112 | K | 2 | 20220823 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | F | 1112 | insstop | 2 | 20210114 |
| EPI_ISL_18373482 | NSP3 | hCoV-19/England/CLIMB-CM7YG4BX/2023 | F | 1112 | V | 66 | 20230929 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | F | 1112 | stop | 6 | 20220728 |
| EPI_ISL_12955756 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733749339/2022 | F | 1112 | C | 3 | 20220227 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | F | 1112 | N | 1 | 20210526 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | F | 1112 | T | 2 | 20220628 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | F | 1112 | insMstopstopYQ | 2 | 20220103 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | F | 1112 | I | 10 | 20230117 |
| EPI_ISL_3980368 | NSP3 | hCoV-19/Sweden/UUH-000200127864/2021 | F | 1112 | insRstopFstopVCMstopstopYQ | 10 | 20210819 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | F | 1112 | insstopstopstopYQ | 1 | 20220627 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | F | 1112 | L | 150 | 20250116 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | F | 1112 | insRstopFstop | 3 | 20230217 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | F | 1112 | insYV | 2 | 20250116 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | F | 1112 | Y | 15 | 20240816 |
| EPI_ISL_18742025 | NSP3 | hCoV-19/env/Ukraine/80447/2023 | F | 1112 | W | 1 | 20230921 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | F | 1112 | Q | 40 | 20230401 |
| EPI_ISL_9588096 | NSP3 | hCoV-19/England/PHEC-4X03FZA3/2021 | F | 1112 | M | 3 | 20211219 |
| EPI_ISL_15975670 | NSP3 | hCoV-19/Venezuela/Zul256/2022 | F | 1112 | S | 9 | 20220817 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | F | 1112 | del | 61 | 20230418 |
| EPI_ISL_19640837 | NSP3 | hCoV-19/USA/CA-PFZ01900/2024 | V | 1113 | A | 83 | 20240916 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | V | 1113 | del | 52 | 20230418 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | V | 1113 | insDAQG | 2 | 20220721 |
| EPI_ISL_3922925 | NSP3 | hCoV-19/USA/ID-IBL-749565/2021 | V | 1113 | P | 1 | 20210813 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | V | 1113 | I | 379 | 20250116 |
| EPI_ISL_5070990 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-47041/2021 | V | 1113 | insRK | 1 | 20210531 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | V | 1113 | C | 4 | 20220729 |
| EPI_ISL_3010069 | NSP3 | hCoV-19/Spain/CT-HUJ23-17488/2021 | V | 1113 | H | 1 | 20210712 |
| EPI_ISL_19715632 | NSP3 | hCoV-19/Hungary/100021-UPL25-000485/2024 | V | 1113 | L | 517 | 20241206 |
| EPI_ISL_17986998 | NSP3 | hCoV-19/USA/CA-SEARCH-223494/2023 | V | 1113 | E | 8 | 20230120 |
| EPI_ISL_3922925 | NSP3 | hCoV-19/USA/ID-IBL-749565/2021 | V | 1113 | insS | 1 | 20210813 |
| EPI_ISL_18742025 | NSP3 | hCoV-19/env/Ukraine/80447/2023 | V | 1113 | stop | 3 | 20230921 |
| EPI_ISL_10509669 | NSP3 | hCoV-19/Thailand/NIC_SNI_SEQ2740/2022 | V | 1113 | T | 2 | 20220105 |
| EPI_ISL_12694431 | NSP3 | hCoV-19/Russia/CHU-CRIE-7725793812/2022 | V | 1113 | F | 2 | 20220117 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | V | 1113 | Q | 2 | 20211015 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | V | 1113 | G | 53 | 20230209 |
| EPI_ISL_1855432 | NSP3 | hCoV-19/Senegal/SN-TH-CTE-BM-0343/2020 | V | 1113 | K | 1 | 20200717 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | C | 1114 | insMstopstop | 1 | 20211220 |
| EPI_ISL_18531528 | NSP3 | hCoV-19/Italy/LOM-69518171/2023 | C | 1114 | F | 15 | 20231116 |
| EPI_ISL_18825529 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69573139/2024 | C | 1114 | stop | 7 | 20240103 |
| EPI_ISL_10213032 | NSP3 | hCoV-19/USA/TN-ASC-210685784/2022 | C | 1114 | R | 7 | 20220124 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | C | 1114 | insGKR | 1 | 20210805 |
| EPI_ISL_1855432 | NSP3 | hCoV-19/Senegal/SN-TH-CTE-BM-0343/2020 | C | 1114 | K | 1 | 20200717 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | C | 1114 | del | 48 | 20230418 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | C | 1114 | M | 5 | 20220729 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | C | 1114 | insE | 1 | 20211015 |
| EPI_ISL_19459302 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242906/2024 | C | 1114 | L | 4 | 20240717 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | C | 1114 | V | 1 | 20210118 |
| EPI_ISL_13073888 | NSP3 | hCoV-19/Israel/ICH-741226715/2022 | C | 1114 | W | 4 | 20220523 |
| EPI_ISL_12291386 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1120/2022 | C | 1114 | D | 1 | 20220115 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | C | 1114 | I | 30 | 20250116 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | C | 1114 | A | 2 | 20211015 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | C | 1114 | S | 44 | 20240816 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | C | 1114 | P | 1 | 20230209 |
| EPI_ISL_17649954 | NSP3 | hCoV-19/Japan/KSH021/2022 | C | 1114 | insXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20220927 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | C | 1114 | T | 2 | 20220628 |
| EPI_ISL_15983713 | NSP3 | hCoV-19/Wales/PHWC-PK8ZX3/2022 | C | 1114 | G | 8 | 20221114 |
| EPI_ISL_12999226 | NSP3 | hCoV-19/Russia/KIR-CRIE-7730596639/2022 | C | 1114 | Y | 3 | 20220212 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | D | 1115 | R | 3 | 20230117 |
| EPI_ISL_19829045 | NSP3 | hCoV-19/USA/NY-CDC-LC1136625/2025 | D | 1115 | N | 433 | 20250330 |
| EPI_ISL_19822513 | NSP3 | hCoV-19/Australia/QLD0x015496/2025 | D | 1115 | A | 811 | 20250317 |
| EPI_ISL_14570652 | NSP3 | hCoV-19/Czech Republic/FNO-220576/2022 | D | 1115 | F | 1 | 20220530 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | D | 1115 | Q | 7 | 20240816 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1115 | C | 1 | 20210318 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | D | 1115 | T | 11 | 20230209 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | D | 1115 | P | 1 | 20220228 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | D | 1115 | insVS | 1 | 20200729 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | D | 1115 | I | 5 | 20230411 |
| EPI_ISL_14313125 | NSP3 | hCoV-19/USA/TX-HMH-M-110241/2022 | D | 1115 | E | 12 | 20220730 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | D | 1115 | M | 5 | 20220728 |
| EPI_ISL_12603435 | NSP3 | hCoV-19/Romania/CT-17552/2022 | D | 1115 | H | 4 | 20220324 |
| EPI_ISL_12955654 | NSP3 | hCoV-19/Russia/MOW-CRIE-7732913955/2022 | D | 1115 | V | 23 | 20220220 |
| EPI_ISL_11061800 | NSP3 | hCoV-19/Austria/LB-R00065-S076/2022 | D | 1115 | insN | 1 | 20220307 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | D | 1115 | stop | 56 | 20230401 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | D | 1115 | insstop | 4 | 20220705 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | D | 1115 | S | 24 | 20250116 |
| EPI_ISL_17516611 | NSP3 | hCoV-19/Canada/NS-NSH-613254/2023 | D | 1115 | B | 6 | 20230401 |
| EPI_ISL_7401061 | NSP3 | hCoV-19/Turkey/HSGM-F3792/2021 | D | 1115 | insSPAA | 2 | 20211124 |
| EPI_ISL_19819862 | NSP3 | hCoV-19/Spain/AS-HUCA-232523861/2025 | D | 1115 | Y | 48 | 20250324 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | D | 1115 | K | 2 | 20210823 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | D | 1115 | del | 52 | 20230418 |
| EPI_ISL_19781266 | NSP3 | hCoV-19/Italy/VEN-IZSVe-25RS8006-6_VE/2025 | D | 1115 | G | 978 | 20250214 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | N | 1116 | V | 2 | 20210802 |
| EPI_ISL_18344889 | NSP3 | hCoV-19/Canada/ON-PHL-23-33040/2023 | N | 1116 | B | 19 | 20230925 |
| EPI_ISL_19379480 | NSP3 | hCoV-19/USA/PA-CDC-LC1116161/2024 | N | 1116 | T | 58 | 20240819 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | N | 1116 | stop | 60 | 20230401 |
| EPI_ISL_12955747 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733749151/2022 | N | 1116 | H | 4 | 20220227 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | N | 1116 | Q | 3 | 20220628 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | N | 1116 | insstop | 3 | 20220728 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | N | 1116 | insSSLT | 1 | 20210118 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | N | 1116 | G | 2 | 20211015 |
| EPI_ISL_17651638 | NSP3 | hCoV-19/USA/CA-CDC-QDX49773522/2023 | N | 1116 | Y | 13 | 20230430 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | N | 1116 | E | 3 | 20220131 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | N | 1116 | L | 4 | 20220810 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | N | 1116 | del | 55 | 20240816 |
| EPI_ISL_19101226 | NSP3 | hCoV-19/Burkina Faso/CHUSS_16062/2022 | N | 1116 | R | 1 | 20220823 |
| EPI_ISL_19755109 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC46250/2025 | N | 1116 | K | 15 | 20250209 |
| EPI_ISL_11837519 | NSP3 | hCoV-19/Wales/PHWC-PJXEQ5/2022 | N | 1116 | insS | 1 | 20220316 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1116 | P | 1 | 20220210 |
| EPI_ISL_19477148 | NSP3 | hCoV-19/env/Germany/BY-LGL-6360821/2024 | N | 1116 | D | 122 | 20240918 |
| EPI_ISL_19641462 | NSP3 | hCoV-19/USA/NE-L384257016/2024 | N | 1116 | S | 782 | 20241223 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | N | 1116 | A | 1 | 20201214 |
| EPI_ISL_12955526 | NSP3 | hCoV-19/Russia/KAM-CRIE-7730388198/2022 | N | 1116 | I | 2 | 20220211 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | I | 1117 | F | 59 | 20230401 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | I | 1117 | C | 1 | 20210801 |
| EPI_ISL_12291383 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1117/2022 | I | 1117 | insXXXXXXXX | 1 | 20220125 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | I | 1117 | R | 3 | 20210920 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1117 | K | 1 | 20210318 |
| EPI_ISL_19831733 | NSP3 | hCoV-19/Luxembourg/LNS6300013/2025 | I | 1117 | V | 1120 | 20250324 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | I | 1117 | insIS | 1 | 20210730 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | I | 1117 | L | 39 | 20250116 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | I | 1117 | P | 1 | 20220628 |
| EPI_ISL_9588096 | NSP3 | hCoV-19/England/PHEC-4X03FZA3/2021 | I | 1117 | stop | 1 | 20211219 |
| EPI_ISL_19101226 | NSP3 | hCoV-19/Burkina Faso/CHUSS_16062/2022 | I | 1117 | insN | 1 | 20220823 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | I | 1117 | Q | 1 | 20211015 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | I | 1117 | del | 50 | 20240816 |
| EPI_ISL_767952 | NSP3 | hCoV-19/Switzerland/AG-ETHZ-420253/2020 | I | 1117 | J | 2 | 20201219 |
| EPI_ISL_19499470 | NSP3 | hCoV-19/USA/TX-HMH-M-145931/2024 | I | 1117 | N | 51 | 20240901 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | I | 1117 | Y | 10 | 20220810 |
| EPI_ISL_19750807 | NSP3 | hCoV-19/Japan/FR021-0154/2025 | I | 1117 | S | 129 | 20250206 |
| EPI_ISL_12308594 | NSP3 | hCoV-19/Russia/RYA-CRIE-7725529936/2022 | I | 1117 | H | 1 | 20220128 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | I | 1117 | E | 1 | 20201214 |
| EPI_ISL_19753119 | NSP3 | hCoV-19/Shanxi/SXJCCDC-JCCX043/2025 | I | 1117 | T | 963 | 20250208 |
| EPI_ISL_18759655 | NSP3 | hCoV-19/USA/LA-EVTL20826/2023 | I | 1117 | M | 9 | 20231129 |
| EPI_ISL_3533045 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-5087/2021 | K | 1118 | M | 2 | 20210726 |
| EPI_ISL_19545060 | NSP3 | hCoV-19/USA/MN-MDH-43984/2024 | K | 1118 | T | 24 | 20241011 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1118 | D | 3 | 20230209 |
| EPI_ISL_18870485 | NSP3 | hCoV-19/Poland/0111WSN2024_wsseol/2023 | K | 1118 | E | 261 | 20231214 |
| EPI_ISL_1075083 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-20641/2021 | K | 1118 | insstopstop | 1 | 20210105 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | K | 1118 | L | 23 | 20250116 |
| EPI_ISL_19365823 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-144401/2024 | K | 1118 | stop | 7 | 20240805 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | K | 1118 | del | 51 | 20230418 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1118 | P | 5 | 20240816 |
| EPI_ISL_19440755 | NSP3 | hCoV-19/Spain/VC-CVA_GRAL-125392/2024 | K | 1118 | R | 164 | 20240823 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1118 | C | 2 | 20210318 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | K | 1118 | I | 9 | 20230117 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | K | 1118 | A | 4 | 20220721 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | K | 1118 | S | 7 | 20221031 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | K | 1118 | V | 3 | 20220810 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1118 | G | 1 | 20220210 |
| EPI_ISL_19507707 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10034788/2024 | K | 1118 | N | 59 | 20241003 |
| EPI_ISL_14583727 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS.22.16467/2022 | K | 1118 | Q | 23 | 20220803 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | F | 1119 | M | 25 | 20250116 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | F | 1119 | T | 2 | 20211015 |
| EPI_ISL_19543959 | NSP3 | hCoV-19/Canada/BC-BCCDC-747548/2024 | F | 1119 | L | 136 | 20241027 |
| EPI_ISL_15859356 | NSP3 | hCoV-19/Chile/VS-126811/2022 | F | 1119 | V | 6 | 20221107 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | F | 1119 | K | 1 | 20210118 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | F | 1119 | del | 111 | 20230418 |
| EPI_ISL_12955756 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733749339/2022 | F | 1119 | C | 2 | 20220227 |
| EPI_ISL_16348666 | NSP3 | hCoV-19/Israel/ICH-741194030/2022 | F | 1119 | I | 60 | 20221217 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | F | 1119 | P | 5 | 20221206 |
| EPI_ISL_9303896 | NSP3 | hCoV-19/Brazil/SP-IB_147945/2022 | F | 1119 | insLstopstopDSRstopVRXXX | 1 | 20220110 |
| EPI_ISL_11904787 | NSP3 | hCoV-19/USA/MA-Broad-CRSP_3FHH4FW3IXI47ZQI/2022 | F | 1119 | S | 5 | 20220325 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | F | 1119 | G | 1 | 20230209 |
| EPI_ISL_14038750 | NSP3 | hCoV-19/Chile/RM-89589/2022 | F | 1119 | Y | 10 | 20220719 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | F | 1119 | N | 3 | 20221031 |
| EPI_ISL_8527513 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-310722/2022 | F | 1119 | stop | 2 | 20220103 |
| EPI_ISL_1415154 | NSP3 | hCoV-19/India/MH-NCCS-77867/2020 | A | 1120 | R | 1 | 20200917 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | A | 1120 | M | 4 | 20230411 |
| EPI_ISL_19670777 | NSP3 | hCoV-19/Canada/BC-BCCDC-760852/2024 | A | 1120 | V | 429 | 20241222 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | A | 1120 | L | 8 | 20240816 |
| EPI_ISL_16744786 | NSP3 | hCoV-19/USA/TX-HHD-2301124155/2023 | A | 1120 | G | 12 | 20230108 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | A | 1120 | C | 16 | 20221031 |
| EPI_ISL_19273087 | NSP3 | hCoV-19/South Korea/KDCA293594/2024 | A | 1120 | T | 35 | 20240627 |
| EPI_ISL_4106141 | NSP3 | hCoV-19/Thailand/Chanthaburi_SEQ14726/2021 | A | 1120 | F | 2 | 20210822 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | A | 1120 | stop | 1 | 20211220 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1120 | N | 3 | 20220210 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | A | 1120 | I | 22 | 20250116 |
| EPI_ISL_1855432 | NSP3 | hCoV-19/Senegal/SN-TH-CTE-BM-0343/2020 | A | 1120 | H | 1 | 20200717 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | A | 1120 | insL | 1 | 20200729 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | A | 1120 | Q | 3 | 20220628 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | A | 1120 | P | 1 | 20210118 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | A | 1120 | K | 1 | 20200729 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | A | 1120 | Y | 1 | 20210526 |
| EPI_ISL_19741283 | NSP3 | hCoV-19/USA/CO-CDPHE-42972864/2025 | A | 1120 | S | 1570 | 20250210 |
| EPI_ISL_19270794 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189706/2024 | A | 1120 | D | 3 | 20240509 |
| EPI_ISL_2993651 | NSP3 | hCoV-19/Germany/NW-HHU-7873/2021 | A | 1120 | insGF | 1 | 20210708 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | A | 1120 | del | 110 | 20230418 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | D | 1121 | M | 7 | 20240816 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | D | 1121 | del | 118 | 20230418 |
| EPI_ISL_19324129 | NSP3 | hCoV-19/France/IDF-RELAB-IPP08671/2024 | D | 1121 | E | 82 | 20240718 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | D | 1121 | W | 1 | 20230217 |
| EPI_ISL_19420595 | NSP3 | hCoV-19/Liaoning/LNCDC-317-9/2024 | D | 1121 | V | 62 | 20240828 |
| EPI_ISL_19101226 | NSP3 | hCoV-19/Burkina Faso/CHUSS_16062/2022 | D | 1121 | K | 5 | 20220823 |
| EPI_ISL_19699088 | NSP3 | hCoV-19/Turkey/HSGM-AA000574/2024 | D | 1121 | N | 1657 | 20240923 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | D | 1121 | L | 2 | 20220628 |
| EPI_ISL_19233626 | NSP3 | hCoV-19/USA/TX-PHH-CS-03897/2024 | D | 1121 | B | 162 | 20240524 |
| EPI_ISL_12955763 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748456/2022 | D | 1121 | H | 32 | 20220227 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | D | 1121 | S | 5 | 20230117 |
| EPI_ISL_14861670 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12238/2022 | D | 1121 | R | 4 | 20220708 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | D | 1121 | I | 4 | 20230411 |
| EPI_ISL_4106141 | NSP3 | hCoV-19/Thailand/Chanthaburi_SEQ14726/2021 | D | 1121 | F | 1 | 20210822 |
| EPI_ISL_19821614 | NSP3 | hCoV-19/Honduras/CR-341/2025 | D | 1121 | stop | 24 | 20250116 |
| EPI_ISL_19226724 | NSP3 | hCoV-19/USA/CA-SC-284316/2024 | D | 1121 | Y | 951 | 20240526 |
| EPI_ISL_19799894 | NSP3 | hCoV-19/USA/TX-HMH-M-147129/2024 | D | 1121 | A | 201 | 20241218 |
| EPI_ISL_19825400 | NSP3 | hCoV-19/USA/NM-NMDOH-2025008632/2025 | D | 1121 | G | 1453 | 20250304 |
| EPI_ISL_19414826 | NSP3 | hCoV-19/Taiwan/CDC-F94140/2024 | D | 1122 | E | 69 | 20240828 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | D | 1122 | P | 50 | 20230401 |
| EPI_ISL_18773722 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC44959/2023 | D | 1122 | S | 4 | 20231222 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | D | 1122 | L | 5 | 20220628 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1122 | M | 1 | 20220210 |
| EPI_ISL_18406354 | NSP3 | hCoV-19/Austria/AGES-1141583/2023 | D | 1122 | Y | 56 | 20231007 |
| EPI_ISL_8323621 | NSP3 | hCoV-19/Canada/ON-PHL-21-47387/2021 | D | 1122 | B | 5 | 20211208 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | D | 1122 | F | 1 | 20211220 |
| EPI_ISL_18250060 | NSP3 | hCoV-19/Canada/ON-KHS-05924-v1/2023 | D | 1122 | V | 14 | 20230901 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | D | 1122 | del | 67 | 20230418 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | D | 1122 | W | 4 | 20221206 |
| EPI_ISL_17592092 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3038/2023 | D | 1122 | stop | 10 | 20230411 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | D | 1122 | Q | 2 | 20230117 |
| EPI_ISL_19800024 | NSP3 | hCoV-19/USA/TX-HMH-M-147380/2025 | D | 1122 | H | 22 | 20250130 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | D | 1122 | T | 18 | 20230401 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | D | 1122 | I | 6 | 20220602 |
| EPI_ISL_19814217 | NSP3 | hCoV-19/Luxembourg/LNS7281048/2025 | D | 1122 | G | 1499 | 20250124 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | D | 1122 | R | 2 | 20210315 |
| EPI_ISL_19686629 | NSP3 | hCoV-19/New Zealand/25YA0027/2024 | D | 1122 | N | 120 | 20241224 |
| EPI_ISL_19550226 | NSP3 | hCoV-19/Sichuan/BZCDC-0317/2024 | D | 1122 | A | 127 | 20240910 |
| EPI_ISL_16888076 | NSP3 | hCoV-19/USA/GA-EHC-6625I/2022 | L | 1123 | stop | 7 | 20221205 |
| EPI_ISL_19507701 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10133555/2024 | L | 1123 | F | 16 | 20241013 |
| EPI_ISL_17412250 | NSP3 | hCoV-19/Sweden/01_SE100_23CS100695/2023 | L | 1123 | J | 6 | 20230318 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | L | 1123 | S | 17 | 20230401 |
| EPI_ISL_5324100 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324675_CAM_IZSM_COLLI_TIGEM/2021 | L | 1123 | Q | 1 | 20210916 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | L | 1123 | R | 2 | 20220703 |
| EPI_ISL_3299462 | NSP3 | hCoV-19/Sweden/UUH-000199805889N2/2021 | L | 1123 | insXX | 1 | 20210428 |
| EPI_ISL_19342167 | NSP3 | hCoV-19/Jordan/MOH-CPHL1453/2024 | L | 1123 | V | 58 | 20240304 |
| EPI_ISL_11947259 | NSP3 | hCoV-19/England/DHSC-CYNOTU3/2022 | L | 1123 | T | 6 | 20220127 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | L | 1123 | del | 65 | 20230418 |
| EPI_ISL_14311433 | NSP3 | hCoV-19/USA/TX-HMH-M-109140/2022 | L | 1123 | Y | 1 | 20220725 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | L | 1123 | K | 2 | 20211220 |
| EPI_ISL_3533045 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-5087/2021 | L | 1123 | C | 1 | 20210726 |
| EPI_ISL_19656392 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3067/2024 | L | 1123 | I | 8 | 20240813 |
| EPI_ISL_922221 | NSP3 | hCoV-19/England/OXON-F506E2/2021 | N | 1124 | F | 1 | 20210110 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | N | 1124 | T | 12 | 20220602 |
| EPI_ISL_12999202 | NSP3 | hCoV-19/Russia/KAM-CRIE-7730386816/2022 | N | 1124 | I | 2 | 20220209 |
| EPI_ISL_19342167 | NSP3 | hCoV-19/Jordan/MOH-CPHL1453/2024 | N | 1124 | G | 5 | 20240304 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | N | 1124 | stop | 19 | 20230401 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | N | 1124 | del | 67 | 20230418 |
| EPI_ISL_11584304 | NSP3 | hCoV-19/Russia/TAM-CRIE-S_7720153076/2022 | N | 1124 | P | 2 | 20220112 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | N | 1124 | Q | 1 | 20210315 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1124 | V | 1 | 20220210 |
| EPI_ISL_12723298 | NSP3 | hCoV-19/England/LSPA-3E0FAA2/2022 | N | 1124 | B | 1 | 20220510 |
| EPI_ISL_19656392 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3067/2024 | N | 1124 | K | 11 | 20240813 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1124 | R | 1 | 20210318 |
| EPI_ISL_17372568 | NSP3 | hCoV-19/India/TN-SPHL-2891/2023 | N | 1124 | L | 5 | 20230303 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | N | 1124 | Y | 2 | 20221012 |
| EPI_ISL_12822202 | NSP3 | hCoV-19/Germany/BY-RKI-I-811034/2022 | N | 1124 | D | 10 | 20220222 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | N | 1124 | E | 5 | 20240816 |
| EPI_ISL_19507701 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10133555/2024 | N | 1124 | S | 48 | 20241013 |
| EPI_ISL_12999276 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748571/2022 | N | 1124 | H | 4 | 20220227 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | N | 1124 | M | 2 | 20210802 |
| EPI_ISL_16274783 | NSP3 | hCoV-19/Denmark/DCGC-628208/2022 | Q | 1125 | Z | 4 | 20221218 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | Q | 1125 | M | 2 | 20220810 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | Q | 1125 | del | 66 | 20230418 |
| EPI_ISL_19656392 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3067/2024 | Q | 1125 | P | 9 | 20240813 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Q | 1125 | C | 3 | 20221012 |
| EPI_ISL_11947259 | NSP3 | hCoV-19/England/DHSC-CYNOTU3/2022 | Q | 1125 | A | 1 | 20220127 |
| EPI_ISL_19784551 | NSP3 | hCoV-19/Australia/QLD0x0152E0/2025 | Q | 1125 | R | 185 | 20250223 |
| EPI_ISL_17372568 | NSP3 | hCoV-19/India/TN-SPHL-2891/2023 | Q | 1125 | stop | 7 | 20230303 |
| EPI_ISL_17375012 | NSP3 | hCoV-19/South Korea/KDCA222998/2023 | Q | 1125 | E | 8 | 20230308 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Q | 1125 | W | 50 | 20230401 |
| EPI_ISL_19707218 | NSP3 | hCoV-19/Canada/ON-KHS-00291-v1/2025 | Q | 1125 | H | 1212 | 20250114 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | Q | 1125 | V | 1 | 20210315 |
| EPI_ISL_2370929 | NSP3 | hCoV-19/Greece/196479/2021 | Q | 1125 | Y | 1 | 20210205 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Q | 1125 | G | 6 | 20240816 |
| EPI_ISL_19823216 | NSP3 | hCoV-19/USA/NY-SUNYQB-XL3199/2025 | Q | 1125 | L | 260 | 20250322 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | Q | 1125 | I | 1 | 20210802 |
| EPI_ISL_19645467 | NSP3 | hCoV-19/Hubei/HCDC-WH7506/2024 | Q | 1125 | K | 240 | 20241107 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | Q | 1125 | N | 3 | 20230217 |
| EPI_ISL_13563926 | NSP3 | hCoV-19/USA/ID-IBL-824816/2022 | Q | 1125 | S | 8 | 20220602 |
| EPI_ISL_1051817 | NSP3 | hCoV-19/England/OXON-F64C61/2021 | L | 1126 | insILY | 1 | 20210112 |
| EPI_ISL_19408052 | NSP3 | hCoV-19/USA/CA-SC-284962/2024 | L | 1126 | F | 9 | 20240711 |
| EPI_ISL_19656392 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3067/2024 | L | 1126 | V | 84 | 20240813 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | L | 1126 | del | 72 | 20240816 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | L | 1126 | R | 2 | 20210825 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 1126 | M | 5 | 20230217 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | L | 1126 | insstop | 1 | 20220810 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | L | 1126 | A | 3 | 20230217 |
| EPI_ISL_18886832 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019713_01/2023 | L | 1126 | K | 5 | 20231026 |
| EPI_ISL_19344297 | NSP3 | hCoV-19/USA/NY-PRL-240813_83A02/2024 | L | 1126 | S | 114 | 20240804 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1126 | C | 1 | 20210318 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | L | 1126 | insstopTSstop | 1 | 20210805 |
| EPI_ISL_9351012 | NSP3 | hCoV-19/USA/NY-PRL-2022_0114_11F09/2022 | L | 1126 | J | 4 | 20220110 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | L | 1126 | I | 6 | 20221012 |
| EPI_ISL_3219765 | NSP3 | hCoV-19/Belgium/SJ4394134/2021 | L | 1126 | Y | 3 | 20210711 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | L | 1126 | E | 2 | 20220228 |
| EPI_ISL_19270794 | NSP3 | hCoV-19/Italy/LOM-UNIBS-06189706/2024 | L | 1126 | stop | 13 | 20240509 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | L | 1126 | insstopE | 45 | 20230401 |
| EPI_ISL_3568588 | NSP3 | hCoV-19/France/ARA-CHUGA-1063979941/2021 | L | 1126 | T | 2 | 20210620 |
| EPI_ISL_18886832 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019713_01/2023 | T | 1127 | E | 3 | 20231026 |
| EPI_ISL_4955745 | NSP3 | hCoV-19/USA/ID-IBL-756644/2021 | T | 1127 | insstop | 1 | 20210825 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1127 | D | 1 | 20221012 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | T | 1127 | V | 11 | 20220628 |
| EPI_ISL_19081488 | NSP3 | hCoV-19/Russia/MO-RII-MH184560S/2024 | T | 1127 | A | 279 | 20240409 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | T | 1127 | stop | 6 | 20230217 |
| EPI_ISL_19164757 | NSP3 | hCoV-19/India/OR-RMRC_B-ICMR-INSACOG-BBS_383403/2021 | T | 1127 | Q | 2 | 20211120 |
| EPI_ISL_19342167 | NSP3 | hCoV-19/Jordan/MOH-CPHL1453/2024 | T | 1127 | L | 14 | 20240304 |
| EPI_ISL_19719025 | NSP3 | hCoV-19/Germany/BW-RKI-I-1147638/2025 | T | 1127 | I | 1168 | 20250122 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | T | 1127 | insL | 1 | 20200729 |
| EPI_ISL_19470187 | NSP3 | hCoV-19/env/Ukraine/84766/2024 | T | 1127 | S | 34 | 20240115 |
| EPI_ISL_19481034 | NSP3 | hCoV-19/USA/CO-CDPHE-42322759/2024 | T | 1127 | N | 321 | 20240904 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1127 | del | 72 | 20240816 |
| EPI_ISL_12955759 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748473/2022 | T | 1127 | P | 6 | 20220227 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | G | 1128 | K | 1 | 20230209 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | G | 1128 | M | 1 | 20201214 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | G | 1128 | L | 4 | 20230117 |
| EPI_ISL_19726665 | NSP3 | hCoV-19/Brazil/BA-LACENBA-294195302/2024 | G | 1128 | D | 275 | 20241230 |
| EPI_ISL_19540888 | NSP3 | hCoV-19/Mexico/CMX_IBT_IMSS_12910/2024 | G | 1128 | C | 187 | 20240228 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | G | 1128 | insstopS | 1 | 20210813 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1128 | A | 8 | 20220210 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | G | 1128 | del | 83 | 20240816 |
| EPI_ISL_19749792 | NSP3 | hCoV-19/USA/PA-CDC-LC1132702/2025 | G | 1128 | S | 10418 | 20250211 |
| EPI_ISL_12955320 | NSP3 | hCoV-19/Russia/KIR-CRIE-7730597356/2022 | G | 1128 | F | 1 | 20220214 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | G | 1128 | insstopLV | 2 | 20211225 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | G | 1128 | R | 16 | 20230401 |
| EPI_ISL_19656399 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3106/2024 | G | 1128 | V | 203 | 20240822 |
| EPI_ISL_12582769 | NSP3 | hCoV-19/Turkey/HSGM-G8446/2022 | G | 1128 | T | 1 | 20220401 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | G | 1128 | N | 3 | 20230217 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | G | 1128 | W | 4 | 20220222 |
| EPI_ISL_19342167 | NSP3 | hCoV-19/Jordan/MOH-CPHL1453/2024 | G | 1128 | stop | 5 | 20240304 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | G | 1128 | insstopL | 1 | 20220810 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | G | 1128 | I | 2 | 20210315 |
| EPI_ISL_17275342 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45867/2023 | G | 1128 | H | 1 | 20230217 |
| EPI_ISL_17275342 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45867/2023 | Y | 1129 | L | 8 | 20230217 |
| EPI_ISL_3772724 | NSP3 | hCoV-19/South Korea/KDCA9602/2021 | Y | 1129 | K | 1 | 20210803 |
| EPI_ISL_18793988 | NSP3 | hCoV-19/Wales/CLIMB-CM7YMC7A/2024 | Y | 1129 | F | 85 | 20240106 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1129 | T | 2 | 20220210 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | Y | 1129 | stop | 6 | 20220627 |
| EPI_ISL_19656399 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3106/2024 | Y | 1129 | I | 19 | 20240822 |
| EPI_ISL_17372568 | NSP3 | hCoV-19/India/TN-SPHL-2891/2023 | Y | 1129 | S | 9 | 20230303 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | Y | 1129 | W | 1 | 20210804 |
| EPI_ISL_18886197 | NSP3 | hCoV-19/Sweden/F-91524071NG/2024 | Y | 1129 | H | 58 | 20240113 |
| EPI_ISL_18886832 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019713_01/2023 | Y | 1129 | N | 17 | 20231026 |
| EPI_ISL_19597037 | NSP3 | hCoV-19/USA/NJ-PHEL-V24013855/2024 | Y | 1129 | C | 1155 | 20241118 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | Y | 1129 | V | 3 | 20220810 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | Y | 1129 | insFFF | 1 | 20210920 |
| EPI_ISL_19824315 | NSP3 | hCoV-19/South Korea/KDCA297308/2025 | Y | 1129 | P | 3 | 20250317 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Y | 1129 | A | 2 | 20221012 |
| EPI_ISL_1703712 | NSP3 | hCoV-19/India/KL-ICMR-NIV-INSACOG-VOC-274/2020 | Y | 1129 | D | 2 | 20201230 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | Y | 1129 | del | 72 | 20240816 |
| EPI_ISL_3533045 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-5087/2021 | Y | 1129 | R | 1 | 20210726 |
| EPI_ISL_19688441 | NSP3 | hCoV-19/Canada/AB-ABPHL-130525/2025 | K | 1130 | N | 170 | 20250107 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 1130 | Q | 7 | 20230217 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | K | 1130 | V | 4 | 20220628 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | K | 1130 | C | 1 | 20200606 |
| EPI_ISL_19824315 | NSP3 | hCoV-19/South Korea/KDCA297308/2025 | K | 1130 | stop | 25 | 20250317 |
| EPI_ISL_18886832 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019713_01/2023 | K | 1130 | F | 5 | 20231026 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | K | 1130 | L | 15 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1130 | S | 3 | 20220210 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | K | 1130 | I | 4 | 20220810 |
| EPI_ISL_19468251 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-28I-MM00041R/2024 | K | 1130 | T | 53 | 20240928 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | K | 1130 | insA | 1 | 20220103 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 1130 | insICstopstopF | 3 | 20230217 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | K | 1130 | del | 65 | 20230418 |
| EPI_ISL_13349162 | NSP3 | hCoV-19/Canada/AB-ABPHL-68732/2022 | K | 1130 | G | 1 | 20220522 |
| EPI_ISL_18634032 | NSP3 | hCoV-19/Shanghai/SCDC-XG11-15223/2023 | K | 1130 | M | 23 | 20231117 |
| EPI_ISL_19774768 | NSP3 | hCoV-19/Slovenia/1002764/2024 | K | 1130 | R | 287 | 20241220 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | K | 1130 | insE | 1 | 20220119 |
| EPI_ISL_19065430 | NSP3 | hCoV-19/South Korea/KDCA290692/2024 | K | 1130 | E | 9491 | 20240314 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | K | 1130 | insTN | 1 | 20230117 |
| EPI_ISL_19656399 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3106/2024 | K | 1131 | N | 43 | 20240822 |
| EPI_ISL_17557179 | NSP3 | hCoV-19/Sweden/M663793/2023 | K | 1131 | E | 29 | 20230302 |
| EPI_ISL_3568588 | NSP3 | hCoV-19/France/ARA-CHUGA-1063979941/2021 | K | 1131 | F | 2 | 20210620 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1131 | P | 2 | 20230209 |
| EPI_ISL_18936166 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00121/2023 | K | 1131 | del | 55 | 20230418 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1131 | Y | 1 | 20220210 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | K | 1131 | L | 17 | 20230401 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | K | 1131 | V | 2 | 20220228 |
| EPI_ISL_11947259 | NSP3 | hCoV-19/England/DHSC-CYNOTU3/2022 | K | 1131 | D | 1 | 20220127 |
| EPI_ISL_19722064 | NSP3 | hCoV-19/USA/CA-PFZ03961/2025 | K | 1131 | R | 161 | 20250122 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1131 | A | 2 | 20210318 |
| EPI_ISL_12319871 | NSP3 | hCoV-19/Turkey/HSGM-GS1420/2022 | K | 1131 | T | 17 | 20220401 |
| EPI_ISL_3299584 | NSP3 | hCoV-19/Sweden/UUH-000199777591N2/2021 | K | 1131 | stop | 2 | 20210428 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1131 | Q | 8 | 20240816 |
| EPI_ISL_3533045 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-5087/2021 | K | 1131 | H | 2 | 20210726 |
| EPI_ISL_18511506 | NSP3 | hCoV-19/South Korea/KDCA272229/2023 | K | 1131 | I | 5 | 20231019 |
| EPI_ISL_18886832 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019713_01/2023 | P | 1132 | del | 63 | 20231026 |
| EPI_ISL_13318002 | NSP3 | hCoV-19/Canada/BC-BCCDC-435924/2022 | P | 1132 | F | 2 | 20220506 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | P | 1132 | K | 2 | 20220628 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | P | 1132 | V | 1 | 20210428 |
| EPI_ISL_19660788 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-26L-MM00055R/2024 | P | 1132 | H | 646 | 20241226 |
| EPI_ISL_5020645 | NSP3 | hCoV-19/Brazil/SP-IB_133862/2021 | P | 1132 | D | 2 | 20210912 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1132 | I | 2 | 20220210 |
| EPI_ISL_19170814 | NSP3 | hCoV-19/Hong Kong/HK-HKPU-PUN542532126/2023 | P | 1132 | R | 13 | 20230131 |
| EPI_ISL_19795652 | NSP3 | hCoV-19/Canada/ON-PHL-202504578/2025 | P | 1132 | S | 2208 | 20250303 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | P | 1132 | N | 2 | 20220810 |
| EPI_ISL_19159121 | NSP3 | hCoV-19/Japan/7522147-R_S18/2024 | P | 1132 | A | 50 | 20240202 |
| EPI_ISL_18903480 | NSP3 | hCoV-19/USA/CA-HLX-STM-9XH5KPXYQ/2024 | P | 1132 | T | 90 | 20240110 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | P | 1132 | stop | 1 | 20220811 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 1132 | G | 4 | 20240816 |
| EPI_ISL_3568588 | NSP3 | hCoV-19/France/ARA-CHUGA-1063979941/2021 | P | 1132 | C | 1 | 20210620 |
| EPI_ISL_19831971 | NSP3 | hCoV-19/Wales/CLIMB-CM7YF8JB/2025 | P | 1132 | L | 2232 | 20250331 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | P | 1132 | Q | 13 | 20230401 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | P | 1132 | insTI | 2 | 20210813 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | P | 1132 | E | 3 | 20220627 |
| EPI_ISL_19661973 | NSP3 | hCoV-19/env/Germany/BY-LGL-6446845/2024 | A | 1133 | P | 17 | 20241211 |
| EPI_ISL_3922925 | NSP3 | hCoV-19/USA/ID-IBL-749565/2021 | A | 1133 | Y | 1 | 20210813 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | A | 1133 | E | 14 | 20230401 |
| EPI_ISL_18886832 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019713_01/2023 | A | 1133 | del | 66 | 20231026 |
| EPI_ISL_19499519 | NSP3 | hCoV-19/USA/TX-HMH-M-145980/2024 | A | 1133 | T | 184 | 20240830 |
| EPI_ISL_19656399 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3106/2024 | A | 1133 | L | 49 | 20240822 |
| EPI_ISL_12291394 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1128/2022 | A | 1133 | I | 2 | 20220125 |
| EPI_ISL_17006745 | NSP3 | hCoV-19/Germany/BY-RKI-I-1111200/2023 | A | 1133 | G | 12 | 20230212 |
| EPI_ISL_19813246 | NSP3 | hCoV-19/Japan/FR020-0027/2025 | A | 1133 | V | 757 | 20250212 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | A | 1133 | stop | 47 | 20230401 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | A | 1133 | R | 1 | 20210315 |
| EPI_ISL_11798971 | NSP3 | hCoV-19/Slovakia/BA_22_00020171/2022 | A | 1133 | D | 20 | 20220316 |
| EPI_ISL_19664429 | NSP3 | hCoV-19/USA/MN-MDH-45079/2024 | A | 1133 | S | 130 | 20241226 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | A | 1133 | N | 2 | 20230209 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | A | 1133 | K | 1 | 20221012 |
| EPI_ISL_17180980 | NSP3 | hCoV-19/USA/TX-HMH-M-126546/2023 | A | 1133 | F | 4 | 20230301 |
| EPI_ISL_11947259 | NSP3 | hCoV-19/England/DHSC-CYNOTU3/2022 | A | 1133 | Q | 3 | 20220127 |
| EPI_ISL_17721568 | NSP3 | hCoV-19/Italy/LOM-69377914/2023 | A | 1133 | C | 17 | 20230520 |
| EPI_ISL_19826617 | NSP3 | hCoV-19/USA/NY-PRL-250408_83C02/2025 | S | 1134 | L | 4741 | 20250331 |
| EPI_ISL_11947259 | NSP3 | hCoV-19/England/DHSC-CYNOTU3/2022 | S | 1134 | insLXXXXXXXXXXXXX | 1 | 20220127 |
| EPI_ISL_18886832 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019713_01/2023 | S | 1134 | del | 64 | 20231026 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | S | 1134 | N | 3 | 20230217 |
| EPI_ISL_19211552 | NSP3 | hCoV-19/South Korea/KDCA293368/2024 | S | 1134 | A | 126 | 20240529 |
| EPI_ISL_19680034 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09586/2024 | S | 1134 | T | 24 | 20241219 |
| EPI_ISL_11584307 | NSP3 | hCoV-19/Russia/TAM-CRIE-S_7720155118/2022 | S | 1134 | G | 1 | 20220113 |
| EPI_ISL_19572560 | NSP3 | hCoV-19/Japan/RB24-005-96/2024 | S | 1134 | P | 213 | 20240919 |
| EPI_ISL_19656399 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3106/2024 | S | 1134 | Q | 44 | 20240822 |
| EPI_ISL_19747123 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00049/2022 | S | 1134 | insK | 1 | 20221206 |
| EPI_ISL_13812293 | NSP3 | hCoV-19/USA/ID-IBL-831868/2022 | S | 1134 | V | 1 | 20220627 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | S | 1134 | I | 5 | 20220131 |
| EPI_ISL_15975670 | NSP3 | hCoV-19/Venezuela/Zul256/2022 | S | 1134 | stop | 11 | 20220817 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | S | 1134 | F | 23 | 20240816 |
| EPI_ISL_17180980 | NSP3 | hCoV-19/USA/TX-HMH-M-126546/2023 | S | 1134 | K | 9 | 20230301 |
| EPI_ISL_19560210 | NSP3 | hCoV-19/Canada/AB-ABPHL-127117/2024 | R | 1135 | K | 356 | 20241105 |
| EPI_ISL_18875863 | NSP3 | hCoV-19/Russia/RARI-1653/2023 | R | 1135 | T | 18 | 20230710 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | R | 1135 | F | 1 | 20200805 |
| EPI_ISL_19656399 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3106/2024 | R | 1135 | E | 51 | 20240822 |
| EPI_ISL_18886832 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019713_01/2023 | R | 1135 | del | 100 | 20231026 |
| EPI_ISL_19025332 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA10751-P0/2024 | R | 1135 | I | 38 | 20240308 |
| EPI_ISL_19212714 | NSP3 | hCoV-19/env/India/MH-NCL-43-12/2023 | R | 1135 | Q | 7 | 20231212 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | R | 1135 | L | 20 | 20230401 |
| EPI_ISL_18750861 | NSP3 | hCoV-19/USA/TN-SPHL-17100/2023 | R | 1135 | G | 150 | 20230821 |
| EPI_ISL_17585757 | NSP3 | hCoV-19/Egypt/ARMY-CU160/2022 | R | 1135 | stop | 2 | 20220814 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | R | 1135 | Y | 3 | 20210920 |
| EPI_ISL_4106141 | NSP3 | hCoV-19/Thailand/Chanthaburi_SEQ14726/2021 | R | 1135 | P | 1 | 20210822 |
| EPI_ISL_18838936 | NSP3 | hCoV-19/South Africa/NICD-N57377/2023 | R | 1135 | S | 40 | 20231023 |
| EPI_ISL_19546522 | NSP3 | hCoV-19/Italy/LOM_Sacco_Var_R61358/2024 | R | 1135 | N | 1 | 20241017 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | R | 1135 | H | 2 | 20230209 |
| EPI_ISL_12175601 | NSP3 | hCoV-19/Russia/IVA-CRIE-S_7724155533/2022 | R | 1135 | C | 2 | 20220126 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | E | 1136 | K | 360 | 20241001 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1136 | L | 1 | 20220210 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | E | 1136 | insWTII | 1 | 20220628 |
| EPI_ISL_19656399 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3106/2024 | E | 1136 | S | 53 | 20240822 |
| EPI_ISL_14333836 | NSP3 | hCoV-19/USA/ID-IBL-841152/2022 | E | 1136 | H | 2 | 20220728 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | E | 1136 | del | 92 | 20230401 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | E | 1136 | N | 6 | 20240816 |
| EPI_ISL_19317820 | NSP3 | hCoV-19/USA/TX-HMH-M-142162/2024 | E | 1136 | R | 28 | 20240704 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 1136 | Y | 2 | 20210318 |
| EPI_ISL_12955654 | NSP3 | hCoV-19/Russia/MOW-CRIE-7732913955/2022 | E | 1136 | V | 1 | 20220220 |
| EPI_ISL_17592042 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3034/2023 | E | 1136 | insS | 2 | 20230406 |
| EPI_ISL_19826291 | NSP3 | hCoV-19/Canada/ON-HSC-202501561-v1/2025 | E | 1136 | D | 451 | 20250327 |
| EPI_ISL_19756407 | NSP3 | hCoV-19/Russia/SPE-RII-MH222847S/2024 | E | 1136 | G | 90 | 20241212 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | E | 1136 | A | 5 | 20230401 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | E | 1136 | W | 1 | 20230217 |
| EPI_ISL_18981361 | NSP3 | hCoV-19/USA/TX-HMH-M-139816/2024 | E | 1136 | stop | 8 | 20240220 |
| EPI_ISL_18445800 | NSP3 | hCoV-19/Spain/CL-44463/2023 | E | 1136 | Q | 5 | 20231005 |
| EPI_ISL_19212714 | NSP3 | hCoV-19/env/India/MH-NCL-43-12/2023 | E | 1136 | insES | 1 | 20231212 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | E | 1136 | I | 2 | 20210428 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | E | 1136 | F | 1 | 20201214 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | E | 1136 | C | 1 | 20210315 |
| EPI_ISL_19317820 | NSP3 | hCoV-19/USA/TX-HMH-M-142162/2024 | L | 1137 | A | 30 | 20240704 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1137 | T | 1 | 20201214 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | L | 1137 | Y | 1 | 20221012 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | L | 1137 | insstopS | 1 | 20211220 |
| EPI_ISL_19488197 | NSP3 | hCoV-19/France/GES-IPP10987/2024 | L | 1137 | I | 117 | 20240909 |
| EPI_ISL_15969037 | NSP3 | hCoV-19/USA/IL-C22WGS8283/2022 | L | 1137 | V | 5 | 20221027 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | L | 1137 | G | 1 | 20230209 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | L | 1137 | S | 2 | 20221031 |
| EPI_ISL_17516994 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-2037/2023 | L | 1137 | stop | 2 | 20230401 |
| EPI_ISL_19081469 | NSP3 | hCoV-19/Russia/KEM-RII-MH184856S/2024 | L | 1137 | P | 4 | 20240404 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | L | 1137 | del | 95 | 20230401 |
| EPI_ISL_6915370 | NSP3 | hCoV-19/England/BRBR-2BF02FD/2021 | L | 1137 | H | 3 | 20211123 |
| EPI_ISL_19824667 | NSP3 | hCoV-19/Japan/TKYnat18396/2025 | L | 1137 | F | 1839 | 20250326 |
| EPI_ISL_12753306 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726530054/2022 | L | 1137 | R | 10 | 20220201 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | L | 1137 | C | 2 | 20220703 |
| EPI_ISL_19232411 | NSP3 | hCoV-19/England/CLIMB-CM7YMXOK/2024 | L | 1137 | J | 2 | 20240612 |
| EPI_ISL_12740217 | NSP3 | hCoV-19/USA/KS-KSU-2047/2022 | K | 1138 | Y | 3 | 20220208 |
| EPI_ISL_19823370 | NSP3 | hCoV-19/USA/NY-SUNYQB-XL3215/2025 | K | 1138 | R | 288 | 20250327 |
| EPI_ISL_12999276 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748571/2022 | K | 1138 | L | 2 | 20220227 |
| EPI_ISL_9199593 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-72110/2021 | K | 1138 | S | 3 | 20211222 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | K | 1138 | del | 92 | 20230401 |
| EPI_ISL_17786235 | NSP3 | hCoV-19/Portugal/PT48379/2023 | K | 1138 | I | 6 | 20230518 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1138 | M | 1 | 20210318 |
| EPI_ISL_19500027 | NSP3 | hCoV-19/USA/NY-CDC-LC1123960/2024 | K | 1138 | E | 424 | 20241002 |
| EPI_ISL_17790442 | NSP3 | hCoV-19/Singapore/R39MR72/2023 | K | 1138 | T | 40 | 20230605 |
| EPI_ISL_19317820 | NSP3 | hCoV-19/USA/TX-HMH-M-142162/2024 | K | 1138 | stop | 36 | 20240704 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | K | 1138 | insHGT | 1 | 20210118 |
| EPI_ISL_19467060 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004431940/2024 | K | 1138 | N | 290 | 20240722 |
| EPI_ISL_17585751 | NSP3 | hCoV-19/Egypt/ARMY-CU154/2022 | K | 1138 | Q | 4 | 20221112 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1138 | V | 1 | 20220210 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | K | 1138 | G | 1 | 20210920 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | K | 1138 | P | 1 | 20220228 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | K | 1138 | H | 16 | 20230401 |
| EPI_ISL_18264574 | NSP3 | hCoV-19/USA/TX-HMH-M-132697/2023 | V | 1139 | F | 24 | 20230828 |
| EPI_ISL_19784116 | NSP3 | hCoV-19/USA/NY-CDC-LC1134958/2025 | V | 1139 | I | 720 | 20250306 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | V | 1139 | del | 90 | 20230401 |
| EPI_ISL_5324100 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324675_CAM_IZSM_COLLI_TIGEM/2021 | V | 1139 | P | 1 | 20210916 |
| EPI_ISL_19656399 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3106/2024 | V | 1139 | L | 113 | 20240822 |
| EPI_ISL_13751790 | NSP3 | hCoV-19/USA/TX-HMH-104106/2022 | V | 1139 | S | 22 | 20220630 |
| EPI_ISL_16284089 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223160978/2022 | V | 1139 | insTFFPDLNGDVVAIDKKPASRELKV | 1 | 20221112 |
| EPI_ISL_19159121 | NSP3 | hCoV-19/Japan/7522147-R_S18/2024 | V | 1139 | D | 2 | 20240202 |
| EPI_ISL_9199593 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-72110/2021 | V | 1139 | Y | 3 | 20211222 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | V | 1139 | G | 3 | 20220228 |
| EPI_ISL_12955648 | NSP3 | hCoV-19/Russia/MOW-CRIE-7732916557/2022 | V | 1139 | C | 1 | 20220222 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | V | 1139 | Q | 1 | 20210813 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1139 | T | 2 | 20210318 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | V | 1139 | W | 1 | 20210315 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | V | 1139 | E | 8 | 20240816 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | V | 1139 | insTstopMVMWWLLIIN | 1 | 20210809 |
| EPI_ISL_15521549 | NSP3 | hCoV-19/Germany/NI-RKI-I-1011048/2022 | V | 1139 | A | 3 | 20221005 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | V | 1139 | K | 1 | 20220628 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | T | 1140 | D | 1 | 20230217 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | T | 1140 | insSstop | 1 | 20210716 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1140 | E | 1 | 20210318 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | T | 1140 | N | 2 | 20210428 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | T | 1140 | F | 5 | 20240816 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | T | 1140 | Y | 67 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1140 | L | 3 | 20220210 |
| EPI_ISL_17418752 | NSP3 | hCoV-19/USA/MI-SHMSU-C11_I_0169_36/2022 | T | 1140 | V | 5 | 20220815 |
| EPI_ISL_12999276 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748571/2022 | T | 1140 | P | 5 | 20220227 |
| EPI_ISL_5324100 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324675_CAM_IZSM_COLLI_TIGEM/2021 | T | 1140 | C | 1 | 20210916 |
| EPI_ISL_19656399 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3106/2024 | T | 1140 | H | 78 | 20240822 |
| EPI_ISL_15118335 | NSP3 | hCoV-19/USA/NC-CLT-012306/2022 | T | 1140 | I | 57 | 20220914 |
| EPI_ISL_12771916 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726731499/2022 | T | 1140 | R | 6 | 20220203 |
| EPI_ISL_19662696 | NSP3 | hCoV-19/Singapore/R61MQ16/2024 | T | 1140 | A | 871 | 20241108 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | T | 1140 | S | 16 | 20230401 |
| EPI_ISL_16268559 | NSP3 | hCoV-19/USA/NJ-CDC-LC0958969/2022 | T | 1140 | K | 8 | 20221212 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | T | 1140 | del | 53 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1141 | R | 1 | 20210318 |
| EPI_ISL_19159121 | NSP3 | hCoV-19/Japan/7522147-R_S18/2024 | F | 1141 | stop | 6 | 20240202 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | F | 1141 | C | 5 | 20230217 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | F | 1141 | Q | 1 | 20210428 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | F | 1141 | insCFKRAstopSYI | 1 | 20200805 |
| EPI_ISL_2220446 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-35246/2020 | F | 1141 | insSLTstopMVMWWLLIINTT | 1 | 20200810 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | F | 1141 | T | 1 | 20210809 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | F | 1141 | V | 29 | 20240816 |
| EPI_ISL_19049767 | NSP3 | hCoV-19/USA/RI-RISHL-00953/2024 | F | 1141 | L | 203 | 20240321 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | F | 1141 | E | 2 | 20220721 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | F | 1141 | H | 4 | 20221206 |
| EPI_ISL_15315717 | NSP3 | hCoV-19/Finland/THL-202218851/2022 | F | 1141 | S | 6 | 20220915 |
| EPI_ISL_17585694 | NSP3 | hCoV-19/Egypt/ARMY-CU057/2023 | F | 1141 | del | 47 | 20230306 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | F | 1141 | A | 2 | 20210805 |
| EPI_ISL_18878420 | NSP3 | hCoV-19/Spain/CL-COV46132/2024 | F | 1141 | I | 119 | 20240111 |
| EPI_ISL_19713974 | NSP3 | hCoV-19/Russia/SPE-RII-MH224967S/2025 | F | 1141 | Y | 63 | 20250124 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | F | 1142 | N | 2 | 20220721 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | F | 1142 | K | 3 | 20210716 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | F | 1142 | H | 2 | 20210809 |
| EPI_ISL_12955648 | NSP3 | hCoV-19/Russia/MOW-CRIE-7732916557/2022 | F | 1142 | I | 2 | 20220222 |
| EPI_ISL_10944260 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0224/2021 | F | 1142 | R | 1 | 20210906 |
| EPI_ISL_5050306 | NSP3 | hCoV-19/Belgium/IPG-783/2021 | F | 1142 | A | 3 | 20210924 |
| EPI_ISL_19384132 | NSP3 | hCoV-19/South Korea/KDCA294819/2024 | F | 1142 | S | 52 | 20240816 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | F | 1142 | stop | 1 | 20210428 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | F | 1142 | del | 46 | 20230217 |
| EPI_ISL_10765062 | NSP3 | hCoV-19/Thailand/NIC_SNI_SEQ5359/2022 | F | 1142 | P | 3 | 20220105 |
| EPI_ISL_18686121 | NSP3 | hCoV-19/Russia/SPE-RII-MH152947S/2023 | F | 1142 | Y | 51 | 20231128 |
| EPI_ISL_19817671 | NSP3 | hCoV-19/Spain/PV-HUD-70194233/2025 | F | 1142 | L | 559 | 20250324 |
| EPI_ISL_15905296 | NSP3 | hCoV-19/Germany/BW-RKI-I-1033749/2022 | F | 1142 | C | 79 | 20221115 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | F | 1142 | T | 15 | 20230401 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1142 | D | 1 | 20201214 |
| EPI_ISL_15146017 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-24638/2022 | F | 1142 | V | 7 | 20220905 |
| EPI_ISL_18216433 | NSP3 | hCoV-19/env/India/MH-FMR_D2-5b/2022 | P | 1143 | R | 2 | 20220829 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | P | 1143 | Y | 1 | 20210315 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 1143 | K | 6 | 20240816 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | P | 1143 | M | 1 | 20210805 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1143 | F | 4 | 20220210 |
| EPI_ISL_18743744 | NSP3 | hCoV-19/USA/TX-HMH-M-136667/2023 | P | 1143 | T | 3 | 20231221 |
| EPI_ISL_3756619 | NSP3 | hCoV-19/USA/ID-IBL-744731/2021 | P | 1143 | insLTstop | 1 | 20210802 |
| EPI_ISL_18875863 | NSP3 | hCoV-19/Russia/RARI-1653/2023 | P | 1143 | A | 1 | 20230710 |
| EPI_ISL_12308594 | NSP3 | hCoV-19/Russia/RYA-CRIE-7725529936/2022 | P | 1143 | H | 2 | 20220128 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | P | 1143 | V | 1 | 20230209 |
| EPI_ISL_19290901 | NSP3 | hCoV-19/Algeria/330/2022 | P | 1143 | L | 24 | 20220216 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | P | 1143 | del | 47 | 20230217 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | P | 1143 | I | 2 | 20220628 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | P | 1143 | S | 35 | 20221206 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1143 | D | 2 | 20210318 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | P | 1143 | stop | 19 | 20230401 |
| EPI_ISL_19342907 | NSP3 | hCoV-19/South Africa/1073389/2024 | D | 1144 | stop | 17 | 20240726 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1144 | W | 2 | 20220210 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | D | 1144 | M | 16 | 20230401 |
| EPI_ISL_18414009 | NSP3 | hCoV-19/USA/CA-CDPH-500124262/2023 | D | 1144 | H | 11 | 20230823 |
| EPI_ISL_19688562 | NSP3 | hCoV-19/Canada/AB-ABPHL-130688/2025 | D | 1144 | B | 19 | 20250109 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | D | 1144 | L | 5 | 20230209 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | D | 1144 | del | 49 | 20230217 |
| EPI_ISL_18597038 | NSP3 | hCoV-19/South Korea/KDCA275442/2023 | D | 1144 | G | 10 | 20231108 |
| EPI_ISL_12740217 | NSP3 | hCoV-19/USA/KS-KSU-2047/2022 | D | 1144 | F | 10 | 20220208 |
| EPI_ISL_12955648 | NSP3 | hCoV-19/Russia/MOW-CRIE-7732916557/2022 | D | 1144 | K | 3 | 20220222 |
| EPI_ISL_19594392 | NSP3 | hCoV-19/USA/UT-UPHL-241206334587/2024 | D | 1144 | E | 346 | 20241129 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | D | 1144 | S | 4 | 20220628 |
| EPI_ISL_2349177 | NSP3 | hCoV-19/Greece/194338/2021 | D | 1144 | I | 1 | 20210423 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | D | 1144 | R | 4 | 20230217 |
| EPI_ISL_18517953 | NSP3 | hCoV-19/USA/MN-HLX-VSX-A08663/2023 | D | 1144 | V | 12 | 20230908 |
| EPI_ISL_19764443 | NSP3 | hCoV-19/Spain/AS-HUCA-232515422/2025 | D | 1144 | Y | 76 | 20250221 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | D | 1144 | T | 23 | 20220721 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | D | 1144 | A | 68 | 20241001 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | D | 1144 | insNV | 1 | 20210428 |
| EPI_ISL_19826494 | NSP3 | hCoV-19/USA/NY-PRL-250408_81C10/2025 | D | 1144 | N | 901 | 20250327 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | D | 1144 | insstopM | 18 | 20220210 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | L | 1145 | Q | 2 | 20220628 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | L | 1145 | T | 2 | 20221206 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | L | 1145 | F | 9 | 20231022 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | L | 1145 | insKWstopCGGYstopLstopTLHTLFstopE | 1 | 20230401 |
| EPI_ISL_4256610 | NSP3 | hCoV-19/Italy/LIG-162146879/2021 | L | 1145 | G | 2 | 20210429 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | L | 1145 | I | 18 | 20240816 |
| EPI_ISL_12582733 | NSP3 | hCoV-19/Turkey/HSGM-GS1929/2022 | L | 1145 | stop | 8 | 20220410 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | L | 1145 | P | 1 | 20230209 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | L | 1145 | del | 48 | 20230217 |
| EPI_ISL_2102580 | NSP3 | hCoV-19/USA/CA-CZB-30244/2021 | L | 1145 | J | 1 | 20210317 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | L | 1145 | R | 1 | 20210806 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | L | 1145 | C | 1 | 20210716 |
| EPI_ISL_10397131 | NSP3 | hCoV-19/Turkey/HSGM-G1544/2022 | L | 1145 | Y | 3 | 20220214 |
| EPI_ISL_17062642 | NSP3 | hCoV-19/Thailand/NIC_RET_741/2023 | L | 1145 | K | 2 | 20230124 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | L | 1145 | V | 41 | 20230401 |
| EPI_ISL_10729449 | NSP3 | hCoV-19/India/PY-SEQ_12992_S223_R1_001/2022 | L | 1145 | E | 1 | 20220202 |
| EPI_ISL_19101230 | NSP3 | hCoV-19/Burkina Faso/CHUSS_16057/2022 | L | 1145 | S | 12 | 20220823 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 1145 | A | 1 | 20230217 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | N | 1146 | F | 1 | 20200606 |
| EPI_ISL_19565367 | NSP3 | hCoV-19/France/OCC-RELAB-HCL724000597401/2024 | N | 1146 | S | 273 | 20241108 |
| EPI_ISL_19826620 | NSP3 | hCoV-19/USA/NY-PRL-250408_82D01/2025 | N | 1146 | T | 71 | 20250324 |
| EPI_ISL_17496276 | NSP3 | hCoV-19/Singapore/R23MR440/2023 | N | 1146 | B | 4 | 20230406 |
| EPI_ISL_19507696 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10149703/2024 | N | 1146 | K | 53 | 20240925 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | N | 1146 | M | 34 | 20230401 |
| EPI_ISL_13707744 | NSP3 | hCoV-19/USA/CA-CDC-LC0737429/2022 | N | 1146 | H | 9 | 20220623 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | N | 1146 | R | 4 | 20230401 |
| EPI_ISL_8146509 | NSP3 | hCoV-19/Italy/LAZ-IFO-12210565/2021 | N | 1146 | V | 5 | 20211221 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | N | 1146 | stop | 1 | 20230217 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | N | 1146 | del | 51 | 20231022 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | N | 1146 | insWstop | 1 | 20211220 |
| EPI_ISL_4395326 | NSP3 | hCoV-19/Poland/8518/2021 | N | 1146 | C | 1 | 20210909 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | N | 1146 | P | 1 | 20210212 |
| EPI_ISL_11100947 | NSP3 | hCoV-19/USA/AZ-TG1271362/2022 | N | 1146 | Y | 2 | 20220216 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | N | 1146 | Q | 2 | 20220721 |
| EPI_ISL_6599853 | NSP3 | hCoV-19/Thailand/001/2021 | N | 1146 | L | 4 | 20211021 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | N | 1146 | insC | 1 | 20210801 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1146 | E | 1 | 20210318 |
| EPI_ISL_18215457 | NSP3 | hCoV-19/Israel/ICH-741198711/2023 | N | 1146 | I | 43 | 20230822 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | N | 1146 | D | 119 | 20240816 |
| EPI_ISL_19705505 | NSP3 | hCoV-19/USA/MS-MSPHL-0012/2025 | G | 1147 | S | 56 | 20250122 |
| EPI_ISL_12291250 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0981/2022 | G | 1147 | E | 12 | 20220121 |
| EPI_ISL_10314883 | NSP3 | hCoV-19/Belarus/MI-CRIE-7724095258/2021 | G | 1147 | R | 6 | 20211207 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | G | 1147 | W | 45 | 20230401 |
| EPI_ISL_8147233 | NSP3 | hCoV-19/Sweden/UUH-500000081062SP/2021 | G | 1147 | stop | 2 | 20211216 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | G | 1147 | N | 1 | 20220628 |
| EPI_ISL_19746926 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10354/2025 | G | 1147 | C | 203 | 20250129 |
| EPI_ISL_8527824 | NSP3 | hCoV-19/Senegal/4187708/2021 | G | 1147 | P | 7 | 20210309 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | G | 1147 | V | 7 | 20221118 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | G | 1147 | T | 1 | 20210428 |
| EPI_ISL_2681522 | NSP3 | hCoV-19/Greece/14556/2021 | G | 1147 | F | 1 | 20210602 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | G | 1147 | del | 51 | 20231022 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1147 | I | 4 | 20220210 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | G | 1147 | K | 6 | 20220721 |
| EPI_ISL_19352454 | NSP3 | hCoV-19/South Korea/KDCA294242/2024 | G | 1147 | D | 6 | 20240730 |
| EPI_ISL_17186950 | NSP3 | hCoV-19/Japan/TKYnat12604/2023 | G | 1147 | A | 7 | 20230220 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | D | 1148 | stop | 10 | 20230401 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | D | 1148 | I | 2 | 20210803 |
| EPI_ISL_19030093 | NSP3 | hCoV-19/Palestine/534060/2024 | D | 1148 | N | 130 | 20240319 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | D | 1148 | T | 1 | 20220112 |
| EPI_ISL_15982745 | NSP3 | hCoV-19/Brazil/MG_LBI_1263/2021 | D | 1148 | insXXC | 1 | 20211217 |
| EPI_ISL_19705505 | NSP3 | hCoV-19/USA/MS-MSPHL-0012/2025 | D | 1148 | Y | 15 | 20250122 |
| EPI_ISL_18519362 | NSP3 | hCoV-19/Brazil/MG-1808/2023 | D | 1148 | insPL | 1 | 20230110 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | D | 1148 | F | 1 | 20220109 |
| EPI_ISL_15255952 | NSP3 | hCoV-19/Mexico/GUA_InDRE_FB21728_E11319200345_S15139/2022 | D | 1148 | V | 16 | 20220904 |
| EPI_ISL_9954487 | NSP3 | hCoV-19/Italy/VEN-OR01P15193/2021 | D | 1148 | C | 24 | 20211114 |
| EPI_ISL_14242421 | NSP3 | hCoV-19/Peru/CAL-INS-23132/2022 | D | 1148 | H | 5 | 20220705 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | D | 1148 | M | 3 | 20221118 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | D | 1148 | insWW | 3 | 20221118 |
| EPI_ISL_8193590 | NSP3 | hCoV-19/Egypt/NRC-7068/2020 | D | 1148 | R | 1 | 20201108 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | D | 1148 | insTLR | 1 | 20230209 |
| EPI_ISL_19782487 | NSP3 | hCoV-19/USA/NY-NYCPHL-019579/2024 | D | 1148 | E | 152 | 20240821 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | D | 1148 | del | 52 | 20231022 |
| EPI_ISL_18926657 | NSP3 | hCoV-19/England/CLIMB-CM7YGICM/2024 | D | 1148 | A | 213 | 20240208 |
| EPI_ISL_18304614 | NSP3 | hCoV-19/USA/MS-MSPHL-0598/2023 | D | 1148 | G | 34 | 20230825 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | D | 1148 | insGW | 1 | 20210114 |
| EPI_ISL_8527824 | NSP3 | hCoV-19/Senegal/4187708/2021 | D | 1148 | L | 6 | 20210309 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | D | 1148 | insG | 1 | 20220103 |
| EPI_ISL_7606672 | NSP3 | hCoV-19/Italy/PIE_IRCC_15865816/2021 | D | 1148 | B | 2 | 20211206 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | D | 1148 | P | 3 | 20221012 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | D | 1148 | W | 33 | 20230401 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | D | 1148 | Q | 2 | 20220628 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | V | 1149 | insNCY | 2 | 20210809 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | V | 1149 | Y | 6 | 20220705 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | V | 1149 | P | 1 | 20210315 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | V | 1149 | S | 3 | 20210920 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | V | 1149 | insSRLL | 1 | 20210806 |
| EPI_ISL_14333838 | NSP3 | hCoV-19/USA/ID-IBL-841473/2022 | V | 1149 | stop | 2 | 20220729 |
| EPI_ISL_18423725 | NSP3 | hCoV-19/USA/TX-HMH-134914/2023 | V | 1149 | M | 11 | 20231013 |
| EPI_ISL_17062642 | NSP3 | hCoV-19/Thailand/NIC_RET_741/2023 | V | 1149 | R | 1 | 20230124 |
| EPI_ISL_3299584 | NSP3 | hCoV-19/Sweden/UUH-000199777591N2/2021 | V | 1149 | H | 1 | 20210428 |
| EPI_ISL_19363847 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14011/2024 | V | 1149 | A | 126 | 20240326 |
| EPI_ISL_8146235 | NSP3 | hCoV-19/Sweden/UUH-500000075418SP/2021 | V | 1149 | insXXX | 1 | 20211209 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1149 | T | 1 | 20210318 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | V | 1149 | del | 45 | 20231022 |
| EPI_ISL_11359822 | NSP3 | hCoV-19/USA/KS-KSU-1753/2022 | V | 1149 | G | 5 | 20220128 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | V | 1149 | C | 8 | 20221206 |
| EPI_ISL_3923186 | NSP3 | hCoV-19/USA/ID-IBL-643742/2020 | V | 1149 | insWWL | 1 | 20200814 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | V | 1149 | F | 4 | 20240816 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | V | 1149 | I | 8 | 20230401 |
| EPI_ISL_16456466 | NSP3 | hCoV-19/USA/WA-UW-22122840220/2022 | V | 1149 | E | 12 | 20221228 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | V | 1149 | L | 86 | 20230401 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | V | 1149 | N | 1 | 20200608 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | V | 1150 | D | 1 | 20220119 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | V | 1150 | W | 1 | 20210920 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | V | 1150 | insstop | 1 | 20210918 |
| EPI_ISL_17563793 | NSP3 | hCoV-19/South Korea/KDCA230565/2023 | V | 1150 | L | 177 | 20230407 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | V | 1150 | del | 42 | 20231022 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | V | 1150 | K | 6 | 20240816 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | V | 1150 | insWW | 1 | 20210802 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | V | 1150 | stop | 5 | 20211015 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | V | 1150 | T | 3 | 20221012 |
| EPI_ISL_479749 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0078/2020 | V | 1150 | insAIDYKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20200617 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | V | 1150 | I | 5 | 20220628 |
| EPI_ISL_17211184 | NSP3 | hCoV-19/env/France/NAQ-CHUL-57-43/2023 | V | 1150 | M | 82 | 20230207 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | V | 1150 | E | 5 | 20230209 |
| EPI_ISL_8403800 | NSP3 | hCoV-19/South Korea/KDCA24847/2021 | V | 1150 | R | 2 | 20211223 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | V | 1150 | Q | 1 | 20210118 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | V | 1150 | C | 5 | 20220131 |
| EPI_ISL_16282524 | NSP3 | hCoV-19/Canary Islands/HUGCDN-02901314/2022 | V | 1150 | P | 2 | 20220103 |
| EPI_ISL_14253444 | NSP3 | hCoV-19/USA/ID-IBL-837865/2022 | V | 1150 | Y | 2 | 20220712 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | V | 1150 | G | 22 | 20221206 |
| EPI_ISL_8147233 | NSP3 | hCoV-19/Sweden/UUH-500000081062SP/2021 | V | 1150 | insXXX | 1 | 20211216 |
| EPI_ISL_19410459 | NSP3 | hCoV-19/Italy/LOM_Niguarda_45160255FIA/2024 | V | 1150 | A | 812 | 20240826 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 1150 | F | 8 | 20230217 |
| EPI_ISL_9594746 | NSP3 | hCoV-19/USA/WA-CDC-UW22012513002/2022 | A | 1151 | C | 68 | 20220125 |
| EPI_ISL_8146509 | NSP3 | hCoV-19/Italy/LAZ-IFO-12210565/2021 | A | 1151 | insENPTIQKDVLECXXXXXX | 1 | 20211221 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1151 | K | 3 | 20220210 |
| EPI_ISL_14436171 | NSP3 | hCoV-19/USA/TX-HMH-110523/2022 | A | 1151 | V | 22 | 20220801 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | A | 1151 | Y | 2 | 20210315 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | A | 1151 | N | 4 | 20210809 |
| EPI_ISL_19251815 | NSP3 | hCoV-19/Japan/FR047-0352/2024 | A | 1151 | G | 14 | 20240613 |
| EPI_ISL_12174389 | NSP3 | hCoV-19/USA/WA-CDC-UW22033030795/2022 | A | 1151 | F | 87 | 20220330 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | A | 1151 | del | 45 | 20231022 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | A | 1151 | I | 50 | 20240816 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | A | 1151 | T | 5 | 20230401 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | A | 1151 | M | 4 | 20220131 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | A | 1151 | E | 8 | 20220721 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | A | 1151 | P | 8 | 20230217 |
| EPI_ISL_14488405 | NSP3 | hCoV-19/USA/ID-IBL-841488/2022 | A | 1151 | L | 5 | 20220728 |
| EPI_ISL_19690116 | NSP3 | hCoV-19/Italy/EMR-IZSLER-006695-006-01/2024 | A | 1151 | S | 290 | 20241223 |
| EPI_ISL_13282084 | NSP3 | hCoV-19/USA/ID-IBL-683954/2020 | A | 1151 | insstop | 1 | 20201121 |
| EPI_ISL_16270950 | NSP3 | hCoV-19/USA/TX-HMH-M-119923/2022 | A | 1151 | D | 4 | 20221211 |
| EPI_ISL_18078794 | NSP3 | hCoV-19/Brazil/RS-LBI-3034/2023 | I | 1152 | S | 582 | 20230109 |
| EPI_ISL_2102530 | NSP3 | hCoV-19/USA/CA-CZB-29875/2021 | I | 1152 | J | 3 | 20210202 |
| EPI_ISL_8633718 | NSP3 | hCoV-19/France/IDF-HMN-22012040602/2022 | I | 1152 | G | 2 | 20220104 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | I | 1152 | del | 55 | 20240816 |
| EPI_ISL_15395038 | NSP3 | hCoV-19/USA/OH-CDC-QDX42000652/2022 | I | 1152 | T | 9 | 20220928 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | I | 1152 | C | 4 | 20220721 |
| EPI_ISL_12319910 | NSP3 | hCoV-19/Turkey/HSGM-GS1765/2022 | I | 1152 | N | 3 | 20220401 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | I | 1152 | W | 1 | 20210418 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | I | 1152 | insRCVstopET | 1 | 20210920 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | I | 1152 | Y | 7 | 20220628 |
| EPI_ISL_14440955 | NSP3 | hCoV-19/India/TN-ICMR-NIRT-INSACOG-W8/2022 | I | 1152 | H | 2 | 20220202 |
| EPI_ISL_19475143 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-1731/2024 | I | 1152 | V | 164 | 20240819 |
| EPI_ISL_18032269 | NSP3 | hCoV-19/Malaysia/USM_M358_53/2023 | I | 1152 | L | 66 | 20230517 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | I | 1152 | stop | 7 | 20230401 |
| EPI_ISL_2137749 | NSP3 | hCoV-19/USA/KS-KSU-9156-2/2021 | I | 1152 | D | 2 | 20210408 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | I | 1152 | R | 1 | 20220109 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | I | 1152 | A | 1 | 20210805 |
| EPI_ISL_18706795 | NSP3 | hCoV-19/USA/CA-HLX-STM-GZPAV96PH/2023 | I | 1152 | M | 38 | 20231129 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | I | 1152 | F | 7 | 20230209 |
| EPI_ISL_19410067 | NSP3 | hCoV-19/Spain/CT-HCB-4257/2024 | D | 1153 | B | 10 | 20240822 |
| EPI_ISL_8193905 | NSP3 | hCoV-19/Egypt/NRC-6032/2020 | D | 1153 | M | 1 | 20200623 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | D | 1153 | Q | 1 | 20220628 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | D | 1153 | del | 47 | 20240816 |
| EPI_ISL_12291250 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0981/2022 | D | 1153 | V | 4 | 20220121 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | D | 1153 | F | 4 | 20221012 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | D | 1153 | P | 1 | 20200606 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | D | 1153 | stop | 11 | 20220131 |
| EPI_ISL_18036679 | NSP3 | hCoV-19/Guangdong/GDCDC_SZHG_2169/2023 | D | 1153 | Y | 12 | 20230625 |
| EPI_ISL_19578618 | NSP3 | hCoV-19/Canada/ON-PHL-202422705/2024 | D | 1153 | G | 83 | 20241122 |
| EPI_ISL_19062849 | NSP3 | hCoV-19/England/CLIMB-CM7YJDAB/2024 | D | 1153 | A | 107 | 20240405 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | D | 1153 | W | 1 | 20220112 |
| EPI_ISL_17387936 | NSP3 | hCoV-19/Japan/PG-466912/2023 | D | 1153 | H | 9 | 20230313 |
| EPI_ISL_14253444 | NSP3 | hCoV-19/USA/ID-IBL-837865/2022 | D | 1153 | S | 2 | 20220712 |
| EPI_ISL_19612448 | NSP3 | hCoV-19/France/NOR-RELAB-IPP13301/2024 | D | 1153 | N | 235 | 20241118 |
| EPI_ISL_19437684 | NSP3 | hCoV-19/South Africa/NICD-N58374/2024 | D | 1153 | E | 94 | 20240618 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | D | 1153 | R | 2 | 20230217 |
| EPI_ISL_16133197 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-41277/2022 | D | 1153 | I | 4 | 20221003 |
| EPI_ISL_9476283 | NSP3 | hCoV-19/Brazil/SP-IB_149982/2022 | D | 1153 | insYKHYTPSKLIXXX | 1 | 20220117 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | D | 1153 | K | 1 | 20210315 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | D | 1153 | T | 1 | 20230401 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | D | 1153 | L | 3 | 20210809 |
| EPI_ISL_18057161 | NSP3 | hCoV-19/USA/TX-HMH-M-130058/2023 | Y | 1154 | stop | 6 | 20230714 |
| EPI_ISL_7231681 | NSP3 | hCoV-19/USA/NM-CDC-ASC210389782/2021 | Y | 1154 | insK | 1 | 20211104 |
| EPI_ISL_18823677 | NSP3 | hCoV-19/South Korea/KDCA282896/2024 | Y | 1154 | C | 17 | 20240102 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | Y | 1154 | K | 1 | 20200606 |
| EPI_ISL_14253444 | NSP3 | hCoV-19/USA/ID-IBL-837865/2022 | Y | 1154 | L | 9 | 20220712 |
| EPI_ISL_18552887 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YR91E/2023 | Y | 1154 | S | 325 | 20231104 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1154 | A | 1 | 20210318 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | Y | 1154 | del | 38 | 20231022 |
| EPI_ISL_19368788 | NSP3 | hCoV-19/USA/OH-USAFSAM-S22849/2024 | Y | 1154 | F | 44 | 20240730 |
| EPI_ISL_16133197 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-41277/2022 | Y | 1154 | I | 5 | 20221003 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | Y | 1154 | insstop | 1 | 20200805 |
| EPI_ISL_570845 | NSP3 | hCoV-19/USA/WA-UW-19291/2020 | Y | 1154 | insKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELKVTFFPDLNGDVVAIDY | 1 | 20200730 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | Y | 1154 | V | 3 | 20220721 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 1154 | D | 3 | 20230217 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Y | 1154 | insCLACstopQCNstopstop | 1 | 20230401 |
| EPI_ISL_19709610 | NSP3 | hCoV-19/Taiwan/CDC-F94598/2025 | Y | 1154 | H | 203 | 20250120 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | Y | 1154 | T | 43 | 20230401 |
| EPI_ISL_10497477 | NSP3 | hCoV-19/env/Wuhan/IVDC-HBA20/2020 | Y | 1154 | W | 1 | 20200101 |
| EPI_ISL_17673577 | NSP3 | hCoV-19/France/ARA-HCL723000684801/2023 | Y | 1154 | N | 8 | 20230502 |
| EPI_ISL_18823302 | NSP3 | hCoV-19/South Korea/KDCA282495/2023 | K | 1155 | E | 27 | 20231225 |
| EPI_ISL_18146467 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48013/2023 | K | 1155 | H | 1 | 20230721 |
| EPI_ISL_19459270 | NSP3 | hCoV-19/Spain/VC-CVA_ELCH-120220/2023 | K | 1155 | stop | 12 | 20230405 |
| EPI_ISL_19833200 | NSP3 | hCoV-19/Poland/Kce-46/2025 | K | 1155 | R | 393862 | 20250411 |
| EPI_ISL_19558239 | NSP3 | hCoV-19/Canada/BC-BCCDC-750820/2024 | K | 1155 | G | 20 | 20241105 |
| EPI_ISL_18233656 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48069/2023 | K | 1155 | Q | 33 | 20230817 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | K | 1155 | T | 130 | 20230401 |
| EPI_ISL_18779976 | NSP3 | hCoV-19/USA/NY-CDC-QDX90794227/2023 | K | 1155 | I | 6 | 20231228 |
| EPI_ISL_18602327 | NSP3 | hCoV-19/USA/NY-CDC-QDX88030578/2023 | K | 1155 | L | 8 | 20231120 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1155 | P | 1 | 20220210 |
| EPI_ISL_19678296 | NSP3 | hCoV-19/USA/NJ-CDC-LC1128466/2025 | K | 1155 | S | 204 | 20250105 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | K | 1155 | A | 1 | 20210418 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1155 | Y | 1 | 20230209 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | K | 1155 | D | 2 | 20210315 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | K | 1155 | del | 30 | 20231022 |
| EPI_ISL_16730658 | NSP3 | hCoV-19/Canada/ON-PHL-23-07466/2023 | K | 1155 | N | 49 | 20230121 |
| EPI_ISL_7637663 | NSP3 | hCoV-19/Greece/311925/2021 | K | 1155 | W | 3 | 20211116 |
| EPI_ISL_19378238 | NSP3 | hCoV-19/Denmark/DCGC-688305/2024 | H | 1156 | R | 18 | 20240819 |
| EPI_ISL_12811653 | NSP3 | hCoV-19/Denmark/DCGC-517431/2021 | H | 1156 | D | 7 | 20211228 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | H | 1156 | E | 2 | 20221012 |
| EPI_ISL_19597664 | NSP3 | hCoV-19/Sichuan/DYCDC225/2024 | H | 1156 | N | 75 | 20240701 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | H | 1156 | A | 1 | 20210803 |
| EPI_ISL_10777606 | NSP3 | hCoV-19/France/BRE-IPP13091/2022 | H | 1156 | L | 3 | 20220221 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | H | 1156 | M | 3 | 20210809 |
| EPI_ISL_16020271 | NSP3 | hCoV-19/Thailand/NIC_UDN_25299/2022 | H | 1156 | T | 20 | 20221115 |
| EPI_ISL_18253735 | NSP3 | hCoV-19/USA/IL-C23WGS1463/2023 | H | 1156 | P | 25 | 20230225 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | H | 1156 | insCstopstop | 4 | 20220131 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 1156 | S | 3 | 20220210 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | H | 1156 | I | 7 | 20220131 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | H | 1156 | insNS | 1 | 20221012 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | H | 1156 | del | 30 | 20231022 |
| EPI_ISL_10497477 | NSP3 | hCoV-19/env/Wuhan/IVDC-HBA20/2020 | H | 1156 | stop | 1 | 20200101 |
| EPI_ISL_19632363 | NSP3 | hCoV-19/Canada/ON-PHL-202425367/2024 | H | 1156 | Q | 25 | 20241214 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | H | 1156 | V | 1 | 20200608 |
| EPI_ISL_19809815 | NSP3 | hCoV-19/USA/NY-PRL-250325_81E03/2025 | H | 1156 | Y | 1440 | 20250315 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | H | 1156 | K | 4 | 20240816 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | Y | 1157 | W | 1 | 20200606 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Y | 1157 | insstop | 1 | 20230401 |
| EPI_ISL_19415566 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YKRR5/2024 | Y | 1157 | C | 10 | 20240826 |
| EPI_ISL_12321724 | NSP3 | hCoV-19/Turkey/HSGM-GS2536/2022 | Y | 1157 | stop | 5 | 20220405 |
| EPI_ISL_12658797 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1297/2021 | Y | 1157 | L | 12 | 20211104 |
| EPI_ISL_14253444 | NSP3 | hCoV-19/USA/ID-IBL-837865/2022 | Y | 1157 | K | 3 | 20220712 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | Y | 1157 | del | 71 | 20230401 |
| EPI_ISL_19553254 | NSP3 | hCoV-19/Australia/QLD0x014D72/2024 | Y | 1157 | H | 1354 | 20241028 |
| EPI_ISL_12694301 | NSP3 | hCoV-19/Russia/MAG-CRIE-S_7724366579/2022 | Y | 1157 | S | 2 | 20220122 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | Y | 1157 | A | 1 | 20210315 |
| EPI_ISL_9820607 | NSP3 | hCoV-19/Poland/PZH-UMB-13713/2022 | Y | 1157 | D | 195 | 20220130 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | Y | 1157 | I | 3 | 20220628 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Y | 1157 | V | 6 | 20230401 |
| EPI_ISL_12146250 | NSP3 | hCoV-19/Turkey/HSGM-GS1619/2022 | Y | 1157 | F | 6 | 20220401 |
| EPI_ISL_10497477 | NSP3 | hCoV-19/env/Wuhan/IVDC-HBA20/2020 | Y | 1157 | E | 1 | 20200101 |
| EPI_ISL_18253735 | NSP3 | hCoV-19/USA/IL-C23WGS1463/2023 | Y | 1157 | T | 43 | 20230225 |
| EPI_ISL_15708495 | NSP3 | hCoV-19/Costa Rica/INC-7625-771812/2022 | Y | 1157 | N | 3 | 20221019 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | T | 1158 | F | 1 | 20220109 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | T | 1158 | N | 5 | 20230217 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | T | 1158 | insD | 1 | 20230209 |
| EPI_ISL_7591221 | NSP3 | hCoV-19/Russia/SPE-RII-2611S/2021 | T | 1158 | P | 2 | 20211107 |
| EPI_ISL_19081013 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-0578/2024 | T | 1158 | K | 25 | 20240324 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | T | 1158 | Q | 1 | 20220628 |
| EPI_ISL_2695987 | NSP3 | hCoV-19/USA/AZ-ASPHL-1149/2020 | T | 1158 | insPCPRQIKHPHSGALSDPAAIATPGP | 1 | 20200612 |
| EPI_ISL_19656656 | NSP3 | hCoV-19/Germany/NW-RKI-I-1146743/2024 | T | 1158 | I | 368 | 20241122 |
| EPI_ISL_19802493 | NSP3 | hCoV-19/USA/CO-CDPHE-43205547/2025 | T | 1158 | A | 301 | 20250304 |
| EPI_ISL_10308250 | NSP3 | hCoV-19/USA/TN-ASC-210580341/2021 | T | 1158 | insH | 1 | 20211221 |
| EPI_ISL_17680393 | NSP3 | hCoV-19/USA/AZ-CDC-LC1041945/2023 | T | 1158 | S | 11 | 20230430 |
| EPI_ISL_18253735 | NSP3 | hCoV-19/USA/IL-C23WGS1463/2023 | T | 1158 | H | 50 | 20230225 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | T | 1158 | del | 71 | 20230401 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | T | 1158 | L | 4 | 20220228 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | T | 1158 | V | 1 | 20210315 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | P | 1159 | K | 1 | 20230401 |
| EPI_ISL_19828175 | NSP3 | hCoV-19/Australia/QLD0x0154CC/2025 | P | 1159 | S | 736 | 20250401 |
| EPI_ISL_2349184 | NSP3 | hCoV-19/Greece/202423/2021 | P | 1159 | insXXXXXX | 1 | 20210503 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | P | 1159 | I | 1 | 20210418 |
| EPI_ISL_12176904 | NSP3 | hCoV-19/USA/NY-MSK-1212/2020 | P | 1159 | insCPRQIKHPHSGALSDPAAIA | 1 | 20201129 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | P | 1159 | N | 4 | 20230217 |
| EPI_ISL_14677768 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-S-8075/2021 | P | 1159 | insWstopICGRRK | 1 | 20211126 |
| EPI_ISL_19706729 | NSP3 | hCoV-19/Italy/PIE_IRCC_15801935/2025 | P | 1159 | T | 182 | 20250118 |
| EPI_ISL_1013528 | NSP3 | hCoV-19/Italy/CAM-CRGS-443/2021 | P | 1159 | insSFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDYKHYTP | 1 | 20210112 |
| EPI_ISL_19801241 | NSP3 | hCoV-19/Netherlands/LI-RIVM-145221/2025 | P | 1159 | H | 781 | 20250316 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | P | 1159 | M | 3 | 20210809 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | P | 1159 | V | 1 | 20210315 |
| EPI_ISL_19030484 | NSP3 | hCoV-19/USA/PA-CDC-QDX93824671/2024 | P | 1159 | A | 4 | 20240308 |
| EPI_ISL_17966119 | NSP3 | hCoV-19/USA/CA-CDPH-6000015709/2023 | P | 1159 | insINLER | 1 | 20230130 |
| EPI_ISL_3022170 | NSP3 | hCoV-19/Israel/SMC-7005207/2021 | P | 1159 | insFPLCSTLVLPFPTLSDRSLNSLL | 1 | 20210629 |
| EPI_ISL_2499825 | NSP3 | hCoV-19/USA/AZ-ASPHL-1786/2020 | P | 1159 | insLHN | 1 | 20200702 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | P | 1159 | insIIGR | 1 | 20240816 |
| EPI_ISL_13942967 | NSP3 | hCoV-19/Germany/BW-RKI-I-910027/2022 | P | 1159 | R | 89 | 20220706 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | P | 1159 | E | 1 | 20210420 |
| EPI_ISL_19459293 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2157/2024 | P | 1159 | del | 58 | 20240729 |
| EPI_ISL_11579733 | NSP3 | hCoV-19/India/JK-NCDC-5709216/2021 | P | 1159 | insKNG | 1 | 20210902 |
| EPI_ISL_16282524 | NSP3 | hCoV-19/Canary Islands/HUGCDN-02901314/2022 | P | 1159 | Q | 1 | 20220103 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1159 | C | 2 | 20210318 |
| EPI_ISL_19833128 | NSP3 | hCoV-19/France/HDF-RELAB-IPP03825/2025 | P | 1159 | L | 7258 | 20250317 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | P | 1159 | insVNWLstopET | 4 | 20220131 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1159 | Y | 1 | 20220210 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | S | 1160 | del | 59 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1160 | N | 1 | 20220210 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | S | 1160 | insV | 1 | 20220228 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | S | 1160 | Q | 6 | 20220628 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | S | 1160 | K | 3 | 20220117 |
| EPI_ISL_19079687 | NSP3 | hCoV-19/South Korea/KDCA291242/2024 | S | 1160 | T | 69 | 20240326 |
| EPI_ISL_13577117 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-14417/2022 | S | 1160 | H | 2 | 20220604 |
| EPI_ISL_882687 | NSP3 | hCoV-19/Italy/CAM-CRGS-262/2020 | S | 1160 | insFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVAIDYKHYTPS | 1 | 20201101 |
| EPI_ISL_19595608 | NSP3 | hCoV-19/Yunnan/YNCDC-2558/2024 | S | 1160 | P | 261 | 20240920 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | S | 1160 | insGNLD | 1 | 20210315 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | S | 1160 | R | 2 | 20220228 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | S | 1160 | D | 3 | 20240816 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | S | 1160 | V | 1 | 20210420 |
| EPI_ISL_18899755 | NSP3 | hCoV-19/South Korea/KDCA284346/2024 | S | 1160 | A | 99 | 20240119 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | S | 1160 | L | 73 | 20230401 |
| EPI_ISL_19122470 | NSP3 | hCoV-19/Australia/QLD0x014367/2024 | S | 1160 | Y | 134 | 20240412 |
| EPI_ISL_14593860 | NSP3 | hCoV-19/India/KA-CBR-S3415/2021 | S | 1160 | insT | 1 | 20210627 |
| EPI_ISL_19824194 | NSP3 | hCoV-19/USA/IL-RIPHL_15500_G/2025 | S | 1160 | F | 5271 | 20250320 |
| EPI_ISL_17883570 | NSP3 | hCoV-19/Japan/PG-528066/2023 | S | 1160 | C | 10 | 20230502 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1161 | D | 1 | 20201214 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | F | 1161 | del | 60 | 20230217 |
| EPI_ISL_15734332 | NSP3 | hCoV-19/USA/ID-IBL-862639/2022 | F | 1161 | R | 2 | 20221028 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | F | 1161 | stop | 1 | 20220119 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | F | 1161 | A | 1 | 20220628 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | F | 1161 | W | 1 | 20220117 |
| EPI_ISL_15001995 | NSP3 | hCoV-19/USA/PA-CDC-STM-B8F2434SM/2022 | F | 1161 | S | 13 | 20220906 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | F | 1161 | I | 4 | 20221012 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | F | 1161 | T | 6 | 20230217 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | F | 1161 | insLG | 1 | 20230209 |
| EPI_ISL_19305891 | NSP3 | hCoV-19/Wales/CLIMB-CM7YMRBD/2024 | F | 1161 | L | 148 | 20240716 |
| EPI_ISL_18038185 | NSP3 | hCoV-19/Spain/PV-HUB-54369526/2023 | F | 1161 | Y | 445 | 20230609 |
| EPI_ISL_3022170 | NSP3 | hCoV-19/Israel/SMC-7005207/2021 | F | 1161 | H | 1 | 20210629 |
| EPI_ISL_17723737 | NSP3 | hCoV-19/South Korea/KDCA237584/2023 | F | 1161 | C | 6 | 20230505 |
| EPI_ISL_19412947 | NSP3 | hCoV-19/France/IDF-RELAB-IPP09932/2024 | F | 1161 | V | 13 | 20240823 |
| EPI_ISL_17605351 | NSP3 | hCoV-19/Thailand/NIC_BKK_1595/2023 | F | 1161 | N | 2 | 20230425 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | F | 1161 | P | 2 | 20210420 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1162 | L | 2 | 20201214 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | K | 1162 | C | 1 | 20200606 |
| EPI_ISL_16867039 | NSP3 | hCoV-19/England/BRBR-326B6D6D/2023 | K | 1162 | T | 11 | 20230130 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | K | 1162 | F | 2 | 20220112 |
| EPI_ISL_19739308 | NSP3 | hCoV-19/USA/NJ-CDC-LC1131821/2025 | K | 1162 | N | 43 | 20250201 |
| EPI_ISL_15734351 | NSP3 | hCoV-19/USA/ID-IBL-862835/2022 | K | 1162 | E | 17 | 20221020 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | K | 1162 | del | 54 | 20230401 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | K | 1162 | Q | 2 | 20230217 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1162 | P | 4 | 20240816 |
| EPI_ISL_12321752 | NSP3 | hCoV-19/Turkey/HSGM-GS2484/2022 | K | 1162 | stop | 15 | 20220405 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | K | 1162 | S | 3 | 20220628 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1162 | A | 1 | 20210318 |
| EPI_ISL_19662352 | NSP3 | hCoV-19/Singapore/R67MQ155/2024 | K | 1162 | R | 443 | 20241217 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | K | 1162 | I | 3 | 20210809 |
| EPI_ISL_18743737 | NSP3 | hCoV-19/USA/TX-HMH-M-136612/2023 | K | 1162 | M | 4 | 20231222 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | K | 1162 | V | 1 | 20230401 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | K | 1163 | A | 3 | 20220228 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | K | 1163 | W | 1 | 20200606 |
| EPI_ISL_3022170 | NSP3 | hCoV-19/Israel/SMC-7005207/2021 | K | 1163 | F | 2 | 20210629 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | K | 1163 | V | 2 | 20220721 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | K | 1163 | Y | 3 | 20230401 |
| EPI_ISL_17425923 | NSP3 | hCoV-19/India/MH-CSIR-2917/2023 | K | 1163 | del | 55 | 20230401 |
| EPI_ISL_19806184 | NSP3 | hCoV-19/Wales/CLIMB-CM7YFT3E/2025 | K | 1163 | R | 466 | 20250312 |
| EPI_ISL_18786869 | NSP3 | hCoV-19/Greece/PHLnetwork_PEDY_THESSALIAS-12455/2023 | K | 1163 | T | 25 | 20231025 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 1163 | P | 1 | 20221012 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | K | 1163 | S | 3 | 20221031 |
| EPI_ISL_17837871 | NSP3 | hCoV-19/Australia/ACT12109/2023 | K | 1163 | E | 25 | 20230605 |
| EPI_ISL_19824332 | NSP3 | hCoV-19/Mexico/CMX-INER-INMEGEN-3162/2024 | K | 1163 | N | 36 | 20241001 |
| EPI_ISL_13576280 | NSP3 | hCoV-19/Japan/RIMD09674/2022 | K | 1163 | stop | 3 | 20220331 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1163 | L | 1 | 20201214 |
| EPI_ISL_15734332 | NSP3 | hCoV-19/USA/ID-IBL-862639/2022 | K | 1163 | I | 5 | 20221028 |
| EPI_ISL_7591222 | NSP3 | hCoV-19/Russia/SPE-RII-2614S/2021 | K | 1163 | H | 4 | 20211107 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | K | 1163 | C | 1 | 20220117 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1163 | Q | 23 | 20240816 |
| EPI_ISL_19211593 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6740/2024 | G | 1164 | stop | 7 | 20240409 |
| EPI_ISL_5923229 | NSP3 | hCoV-19/Senegal/SN-IRVAC-016/2021 | G | 1164 | insAKLLHKPIVWPFKKG | 1 | 20210716 |
| EPI_ISL_2408798 | NSP3 | hCoV-19/Sweden/SE1410151633/2021 | G | 1164 | insAV | 1 | 20210129 |
| EPI_ISL_19293393 | NSP3 | hCoV-19/env/Ukraine/84991/2024 | G | 1164 | R | 22 | 20240201 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | G | 1164 | insstopGIY | 1 | 20220119 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | G | 1164 | T | 6 | 20230401 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | G | 1164 | insstopIVTstopTYstopFGMLTMQLIK | 1 | 20210807 |
| EPI_ISL_10064217 | NSP3 | hCoV-19/USA/LA-OD-8289764469/2022 | G | 1164 | L | 4 | 20220207 |
| EPI_ISL_15734332 | NSP3 | hCoV-19/USA/ID-IBL-862639/2022 | G | 1164 | I | 2 | 20221028 |
| EPI_ISL_12610878 | NSP3 | hCoV-19/Turkey/HSGM-GS2771/2022 | G | 1164 | E | 21 | 20220407 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | G | 1164 | D | 1 | 20221206 |
| EPI_ISL_18974090 | NSP3 | hCoV-19/Russia/SPE-RII-MH167391S/2024 | G | 1164 | V | 10 | 20240202 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | G | 1164 | A | 13 | 20230217 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | G | 1164 | del | 62 | 20230217 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | G | 1164 | K | 1 | 20210730 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | G | 1164 | M | 1 | 20230209 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | G | 1164 | S | 6 | 20230217 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | A | 1165 | L | 14 | 20230401 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | A | 1165 | insNCYINLLFGMLTMQLIKP | 1 | 20210428 |
| EPI_ISL_15734351 | NSP3 | hCoV-19/USA/ID-IBL-862835/2022 | A | 1165 | stop | 7 | 20221020 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | A | 1165 | T | 79 | 20230217 |
| EPI_ISL_10064217 | NSP3 | hCoV-19/USA/LA-OD-8289764469/2022 | A | 1165 | K | 1 | 20220207 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | A | 1165 | N | 1 | 20200606 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | A | 1165 | E | 3 | 20221226 |
| EPI_ISL_16282524 | NSP3 | hCoV-19/Canary Islands/HUGCDN-02901314/2022 | A | 1165 | W | 3 | 20220103 |
| EPI_ISL_19705991 | NSP3 | hCoV-19/Germany/BW-RKI-I-1147515/2025 | A | 1165 | V | 1299 | 20250121 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | A | 1165 | D | 16 | 20240627 |
| EPI_ISL_14593863 | NSP3 | hCoV-19/India/KA-CBR-S3418/2021 | A | 1165 | H | 2 | 20210619 |
| EPI_ISL_2499825 | NSP3 | hCoV-19/USA/AZ-ASPHL-1786/2020 | A | 1165 | Y | 1 | 20200702 |
| EPI_ISL_3022170 | NSP3 | hCoV-19/Israel/SMC-7005207/2021 | A | 1165 | insCLSPARKLTWSSSVTXXXXX | 1 | 20210629 |
| EPI_ISL_8186280 | NSP3 | hCoV-19/USA/CA-SEARCH-59077/2021 | A | 1165 | P | 7 | 20211119 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | A | 1165 | G | 17 | 20220721 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | A | 1165 | F | 2 | 20240816 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | A | 1165 | del | 54 | 20230217 |
| EPI_ISL_17273433 | NSP3 | hCoV-19/USA/ID-IBL-878323/2023 | A | 1165 | S | 45 | 20230302 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | A | 1165 | I | 5 | 20221031 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | K | 1166 | insFYIN | 2 | 20221018 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1166 | C | 2 | 20220210 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | K | 1166 | P | 28 | 20221204 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | K | 1166 | stop | 12 | 20221206 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | K | 1166 | D | 1 | 20220721 |
| EPI_ISL_15734351 | NSP3 | hCoV-19/USA/ID-IBL-862835/2022 | K | 1166 | I | 7 | 20221020 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1166 | A | 2 | 20230209 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1166 | S | 10 | 20240816 |
| EPI_ISL_15734332 | NSP3 | hCoV-19/USA/ID-IBL-862639/2022 | K | 1166 | T | 12 | 20221028 |
| EPI_ISL_19717107 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10069/2025 | K | 1166 | Q | 2 | 20250107 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | K | 1166 | L | 2 | 20220112 |
| EPI_ISL_19620033 | NSP3 | hCoV-19/USA/TX-PHH-24C-283M0780/2024 | K | 1166 | N | 256 | 20241009 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | K | 1166 | insstopLstop | 1 | 20220117 |
| EPI_ISL_19440321 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55091/2024 | K | 1166 | R | 105 | 20240904 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 1166 | Y | 2 | 20221012 |
| EPI_ISL_17721562 | NSP3 | hCoV-19/Italy/LOM-69378109/2023 | K | 1166 | E | 6 | 20230523 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 1166 | del | 31 | 20230217 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | L | 1167 | D | 1 | 20210418 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | L | 1167 | K | 2 | 20221012 |
| EPI_ISL_16013177 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-118213/2022 | L | 1167 | N | 2 | 20221114 |
| EPI_ISL_17714032 | NSP3 | hCoV-19/Mexico/CMX_InDRE_FB2862/2023 | L | 1167 | Y | 11 | 20230327 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | L | 1167 | A | 3 | 20240816 |
| EPI_ISL_13110095 | NSP3 | hCoV-19/Israel/SMC-7069420/2022 | L | 1167 | S | 2 | 20220508 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | L | 1167 | T | 1 | 20220117 |
| EPI_ISL_11326591 | NSP3 | hCoV-19/Hong Kong/WHP5478/2022 | L | 1167 | M | 8 | 20220111 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 1167 | del | 33 | 20230217 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | L | 1167 | P | 1 | 20220109 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | L | 1167 | C | 7 | 20211220 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | L | 1167 | F | 12 | 20221226 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1167 | Q | 1 | 20201214 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1167 | R | 1 | 20210318 |
| EPI_ISL_8193609 | NSP3 | hCoV-19/Egypt/NRC-6072/2020 | L | 1167 | insYINLLFGMLTMQ | 1 | 20200627 |
| EPI_ISL_12319910 | NSP3 | hCoV-19/Turkey/HSGM-GS1765/2022 | L | 1167 | E | 2 | 20220401 |
| EPI_ISL_13959232 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K045159/2022 | L | 1167 | V | 6 | 20220709 |
| EPI_ISL_18743567 | NSP3 | hCoV-19/USA/TX-HMH-M-136489/2023 | L | 1167 | I | 23 | 20231216 |
| EPI_ISL_9186701 | NSP3 | hCoV-19/France/NOR-HMN-22012171215/2022 | L | 1167 | W | 2 | 20220110 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | L | 1168 | N | 6 | 20230209 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | L | 1168 | R | 2 | 20210420 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | L | 1168 | Q | 1 | 20220109 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1168 | A | 1 | 20210318 |
| EPI_ISL_2356913 | NSP3 | hCoV-19/Russia/MOW_3051/2021 | L | 1168 | stop | 6 | 20210409 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | L | 1168 | insVIISNLstopstop | 1 | 20220628 |
| EPI_ISL_2499825 | NSP3 | hCoV-19/USA/AZ-ASPHL-1786/2020 | L | 1168 | insYLHTHPHTLTPS | 1 | 20200702 |
| EPI_ISL_18866244 | NSP3 | hCoV-19/Japan/PG-590693/2024 | L | 1168 | S | 8 | 20240118 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | L | 1168 | T | 2 | 20230217 |
| EPI_ISL_19702809 | NSP3 | hCoV-19/Peru/LIM-INS-50863/2024 | L | 1168 | F | 8 | 20240103 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | L | 1168 | E | 2 | 20230401 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | L | 1168 | C | 5 | 20220228 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1168 | K | 1 | 20220210 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 1168 | del | 31 | 20230217 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | L | 1168 | H | 1 | 20230217 |
| EPI_ISL_5923236 | NSP3 | hCoV-19/Senegal/SN-IR1-0074232/2021 | L | 1168 | insHKPIVWHVNTFKKGAKLL | 1 | 20211025 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | L | 1168 | Y | 7 | 20220628 |
| EPI_ISL_19537389 | NSP3 | hCoV-19/Sweden/O-24CO00628/2024 | L | 1168 | V | 120 | 20241022 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | L | 1168 | insTstopT | 1 | 20200721 |
| EPI_ISL_19238001 | NSP3 | hCoV-19/Canada/BC-BCCDC-718100/2024 | L | 1168 | I | 23 | 20240612 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | H | 1169 | del | 35 | 20240816 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | H | 1169 | F | 11 | 20230217 |
| EPI_ISL_11023981 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-27077/2022 | H | 1169 | T | 7 | 20220126 |
| EPI_ISL_15992884 | NSP3 | hCoV-19/Russia/KYA-RII-MH111755S/2022 | H | 1169 | Q | 13 | 20221101 |
| EPI_ISL_19734891 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17333067/2025 | H | 1169 | L | 24 | 20250205 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | H | 1169 | E | 1 | 20220109 |
| EPI_ISL_19633691 | NSP3 | hCoV-19/Canada/BC-BCCDC-757452/2024 | H | 1169 | Y | 442 | 20241209 |
| EPI_ISL_11173024 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-95720/2022 | H | 1169 | N | 9 | 20220307 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | H | 1169 | R | 38 | 20221204 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | H | 1169 | I | 9 | 20211220 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | H | 1169 | stop | 1 | 20210212 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 1169 | G | 1 | 20220210 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | H | 1169 | M | 1 | 20201214 |
| EPI_ISL_9077179 | NSP3 | hCoV-19/Puerto Rico/PR-CDC-ASC210586786/2022 | H | 1169 | K | 2 | 20220105 |
| EPI_ISL_15734341 | NSP3 | hCoV-19/USA/ID-IBL-862790/2022 | H | 1169 | S | 1 | 20221031 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | H | 1169 | D | 2 | 20221012 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1170 | T | 8 | 20230209 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | K | 1170 | P | 5 | 20220703 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1170 | L | 1 | 20201214 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | K | 1170 | G | 4 | 20221018 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | K | 1170 | C | 3 | 20210420 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1170 | Y | 1 | 20210318 |
| EPI_ISL_5881196 | NSP3 | hCoV-19/Thailand/Loei_SEQ19152/2021 | K | 1170 | H | 2 | 20210930 |
| EPI_ISL_19637661 | NSP3 | hCoV-19/Russia/SPE-RII-MH214309S/2024 | K | 1170 | R | 397 | 20241119 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | K | 1170 | I | 12 | 20220112 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | K | 1170 | A | 1 | 20200606 |
| EPI_ISL_19383869 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08124/2024 | K | 1170 | E | 5 | 20240816 |
| EPI_ISL_12753392 | NSP3 | hCoV-19/Russia/LIP-CRIE-7728245773/2022 | K | 1170 | Q | 2 | 20220207 |
| EPI_ISL_12955184 | NSP3 | hCoV-19/Russia/KIR-CRIE-7729064297/2022 | K | 1170 | N | 10 | 20220209 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1170 | V | 1 | 20220210 |
| EPI_ISL_3922925 | NSP3 | hCoV-19/USA/ID-IBL-749565/2021 | K | 1170 | stop | 4 | 20210813 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | K | 1170 | F | 1 | 20210212 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | K | 1170 | del | 33 | 20231009 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | K | 1170 | S | 4 | 20230217 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | P | 1171 | W | 1 | 20210420 |
| EPI_ISL_4395147 | NSP3 | hCoV-19/Poland/25136K/2021 | P | 1171 | Q | 2 | 20210907 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | P | 1171 | insXHstop | 1 | 20210813 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | P | 1171 | K | 2 | 20230209 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | P | 1171 | del | 34 | 20231009 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | P | 1171 | N | 4 | 20220112 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | P | 1171 | insKWKYPQVNGLTS | 1 | 20230209 |
| EPI_ISL_19813327 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56726/2025 | P | 1171 | S | 2159 | 20250310 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | P | 1171 | V | 3 | 20221012 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | P | 1171 | insSK | 1 | 20220228 |
| EPI_ISL_19429320 | NSP3 | hCoV-19/Hubei/HCDC-YC7061/2024 | P | 1171 | H | 391 | 20240826 |
| EPI_ISL_9918066 | NSP3 | hCoV-19/Canada/ON-PHL-22-07482/2022 | P | 1171 | T | 9 | 20220124 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | P | 1171 | E | 35 | 20221204 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | P | 1171 | M | 3 | 20221018 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1171 | Y | 2 | 20210318 |
| EPI_ISL_17177961 | NSP3 | hCoV-19/Germany/BW-RKI-I-1118438/2023 | P | 1171 | F | 7 | 20230227 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | P | 1171 | stop | 7 | 20220703 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | P | 1171 | R | 4 | 20230217 |
| EPI_ISL_19734891 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17333067/2025 | P | 1171 | L | 51 | 20250205 |
| EPI_ISL_8151533 | NSP3 | hCoV-19/Montenegro/CO-00568_MNE000_5786372102/2021 | P | 1171 | A | 4 | 20211205 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | I | 1172 | insVLPG | 1 | 20210726 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1172 | A | 2 | 20210318 |
| EPI_ISL_19729545 | NSP3 | hCoV-19/Lithuania/MB230523_0235/2023 | I | 1172 | T | 28 | 20230518 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1172 | K | 2 | 20220210 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | I | 1172 | S | 2 | 20201214 |
| EPI_ISL_8193609 | NSP3 | hCoV-19/Egypt/NRC-6072/2020 | I | 1172 | insINQXXG | 1 | 20200627 |
| EPI_ISL_12753129 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726731793/2022 | I | 1172 | F | 7 | 20220204 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | I | 1172 | Y | 4 | 20220109 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | I | 1172 | P | 1 | 20210315 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | I | 1172 | Q | 1 | 20230217 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | I | 1172 | stop | 1 | 20200805 |
| EPI_ISL_19578231 | NSP3 | hCoV-19/Botswana/R242B05_BHP/2024 | I | 1172 | L | 75 | 20241126 |
| EPI_ISL_19620696 | NSP3 | hCoV-19/Canada/ON-PHL-202424410/2024 | I | 1172 | V | 545 | 20241209 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | I | 1172 | N | 5 | 20230217 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | I | 1172 | G | 5 | 20210809 |
| EPI_ISL_19534810 | NSP3 | hCoV-19/Japan/FR012-0632/2024 | I | 1172 | M | 7 | 20241005 |
| EPI_ISL_14023621 | NSP3 | hCoV-19/England/PHEC-YYGBH97/2022 | I | 1172 | J | 1 | 20220709 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | I | 1172 | del | 38 | 20231009 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | I | 1172 | R | 2 | 20210525 |
| EPI_ISL_14864309 | NSP3 | hCoV-19/Czech Republic/37SVAN47489/2022 | I | 1172 | insP | 1 | 20220725 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | I | 1172 | C | 1 | 20200729 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1173 | Y | 1 | 20201214 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | V | 1173 | R | 1 | 20210525 |
| EPI_ISL_18736031 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557573/2023 | V | 1173 | G | 6 | 20231218 |
| EPI_ISL_2499825 | NSP3 | hCoV-19/USA/AZ-ASPHL-1786/2020 | V | 1173 | H | 1 | 20200702 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | V | 1173 | N | 37 | 20221204 |
| EPI_ISL_18793774 | NSP3 | hCoV-19/England/CLIMB-CM7YFBTM/2024 | V | 1173 | F | 62 | 20240104 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | V | 1173 | K | 9 | 20230209 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | V | 1173 | C | 7 | 20221012 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | V | 1173 | del | 43 | 20231009 |
| EPI_ISL_12610878 | NSP3 | hCoV-19/Turkey/HSGM-GS2771/2022 | V | 1173 | D | 2 | 20220407 |
| EPI_ISL_19176930 | NSP3 | hCoV-19/England/CLIMB-CM7YMADX/2024 | V | 1173 | L | 441 | 20240422 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | V | 1173 | S | 1 | 20220109 |
| EPI_ISL_10044554 | NSP3 | hCoV-19/USA/MN-CDC-IBX916886613764/2022 | V | 1173 | A | 5 | 20220203 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | V | 1173 | T | 9 | 20230217 |
| EPI_ISL_19615910 | NSP3 | hCoV-19/Canada/QC-L00821280001/2024 | V | 1173 | I | 1695 | 20241202 |
| EPI_ISL_13871263 | NSP3 | hCoV-19/USA/ID-IBL-834305/2022 | W | 1174 | F | 7 | 20220705 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | W | 1174 | A | 3 | 20200729 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | W | 1174 | N | 1 | 20220109 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | W | 1174 | Q | 1 | 20210318 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | W | 1174 | Y | 13 | 20210809 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | W | 1174 | insLYstopL | 1 | 20200608 |
| EPI_ISL_18753639 | NSP3 | hCoV-19/Japan/EIS01-351/2023 | W | 1174 | L | 10 | 20230819 |
| EPI_ISL_5881196 | NSP3 | hCoV-19/Thailand/Loei_SEQ19152/2021 | W | 1174 | P | 3 | 20210930 |
| EPI_ISL_17363372 | NSP3 | hCoV-19/England/PHEC-YYEQP9O/2023 | W | 1174 | C | 44 | 20230317 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | W | 1174 | del | 39 | 20231009 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | W | 1174 | K | 1 | 20210315 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | W | 1174 | insYGTLQNL | 1 | 20210315 |
| EPI_ISL_19507709 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17290271/2024 | W | 1174 | S | 3 | 20241001 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | W | 1174 | E | 1 | 20220228 |
| EPI_ISL_19578231 | NSP3 | hCoV-19/Botswana/R242B05_BHP/2024 | W | 1174 | R | 6 | 20241126 |
| EPI_ISL_15455541 | NSP3 | hCoV-19/Guinea/CERFIG-37850/2022 | W | 1174 | stop | 8 | 20220901 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | W | 1174 | M | 4 | 20221018 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | W | 1174 | T | 3 | 20221012 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | W | 1174 | insstopCGGYstopLstop | 1 | 20210816 |
| EPI_ISL_12955501 | NSP3 | hCoV-19/Russia/KAM-CRIE-7730386774/2022 | W | 1174 | G | 7 | 20220209 |
| EPI_ISL_12753118 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726728613/2022 | H | 1175 | I | 2 | 20220204 |
| EPI_ISL_18987885 | NSP3 | hCoV-19/env/Germany/BY-LGL-6159494/2024 | H | 1175 | Y | 75 | 20240214 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | H | 1175 | del | 42 | 20231009 |
| EPI_ISL_19363908 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14078/2024 | H | 1175 | N | 7 | 20240410 |
| EPI_ISL_1167125 | NSP3 | hCoV-19/Senegal/SN-MBO-201859/2021 | H | 1175 | insV | 1 | 20210127 |
| EPI_ISL_16406122 | NSP3 | hCoV-19/England/LSPA-3265B052/2022 | H | 1175 | Q | 16 | 20221226 |
| EPI_ISL_11312349 | NSP3 | hCoV-19/Israel/SMC-7049536/2022 | H | 1175 | R | 6 | 20220301 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | H | 1175 | G | 3 | 20210806 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | H | 1175 | D | 3 | 20220109 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | H | 1175 | insL | 1 | 20220531 |
| EPI_ISL_19364527 | NSP3 | hCoV-19/Spain/EX-BA_18646047/2024 | H | 1175 | C | 25 | 20240731 |
| EPI_ISL_19363838 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC14162/2024 | H | 1175 | S | 1 | 20240401 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | H | 1175 | T | 1 | 20210816 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | H | 1175 | A | 38 | 20230209 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | H | 1175 | K | 1 | 20210420 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | H | 1175 | E | 2 | 20230401 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | H | 1175 | V | 8 | 20210809 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | H | 1175 | M | 3 | 20211220 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | H | 1175 | W | 1 | 20210525 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | H | 1175 | L | 4 | 20220628 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | H | 1175 | stop | 9 | 20220705 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | H | 1175 | F | 1 | 20210806 |
| EPI_ISL_12308684 | NSP3 | hCoV-19/Russia/KOS-CRIE-7726346418/2022 | V | 1176 | G | 2 | 20220202 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1176 | K | 3 | 20220210 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | V | 1176 | stop | 4 | 20221018 |
| EPI_ISL_19755479 | NSP3 | hCoV-19/USA/CO-CDPHE-43017643/2025 | V | 1176 | A | 229 | 20250208 |
| EPI_ISL_19673509 | NSP3 | hCoV-19/USA/NY-NYULH-21869/2025 | V | 1176 | I | 742 | 20250109 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | V | 1176 | M | 1 | 20210806 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | V | 1176 | P | 1 | 20210525 |
| EPI_ISL_2499825 | NSP3 | hCoV-19/USA/AZ-ASPHL-1786/2020 | V | 1176 | insLTLHDMRRHTXXXXXXXXXXXXXXXX | 1 | 20200702 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | V | 1176 | C | 11 | 20220703 |
| EPI_ISL_3922925 | NSP3 | hCoV-19/USA/ID-IBL-749565/2021 | V | 1176 | insstopQCNstopstop | 1 | 20210813 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | V | 1176 | insL | 1 | 20210806 |
| EPI_ISL_12215599 | NSP3 | hCoV-19/France/IDF-AphpSA-KC000608/2021 | V | 1176 | insFTLLLQLCTFTRS | 1 | 20211227 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | V | 1176 | N | 2 | 20210418 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | V | 1176 | D | 4 | 20230209 |
| EPI_ISL_10943874 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8940/2022 | V | 1176 | Y | 2 | 20220209 |
| EPI_ISL_15718061 | NSP3 | hCoV-19/France/IDF-HMN-22102260302/2022 | V | 1176 | insXXXXX | 1 | 20221024 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1176 | S | 1 | 20201214 |
| EPI_ISL_19130542 | NSP3 | hCoV-19/South Korea/KDCA292705/2024 | V | 1176 | L | 145 | 20240417 |
| EPI_ISL_14681202 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-1402MANI005/2022 | V | 1176 | insNNCNNPstopANNATNKAT | 2 | 20220211 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | V | 1176 | del | 41 | 20231009 |
| EPI_ISL_19699023 | NSP3 | hCoV-19/Spain/AB-HGUA-60911966/2024 | V | 1176 | F | 143 | 20241104 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | V | 1176 | T | 4 | 20230401 |
| EPI_ISL_9487099 | NSP3 | hCoV-19/USA/ID-IBL-787347/2022 | N | 1177 | I | 1 | 20220119 |
| EPI_ISL_19806702 | NSP3 | hCoV-19/Canada/ON-HSC-202501217-v1/2025 | N | 1177 | D | 330 | 20250221 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | N | 1177 | del | 49 | 20231009 |
| EPI_ISL_11175640 | NSP3 | hCoV-19/Australia/VIC44043/2022 | N | 1177 | F | 8 | 20220209 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | N | 1177 | V | 1 | 20200606 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | N | 1177 | T | 78 | 20230605 |
| EPI_ISL_19541996 | NSP3 | hCoV-19/Russia/TA-RII-MH205544S/2024 | N | 1177 | Y | 43 | 20240921 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | N | 1177 | stop | 4 | 20230123 |
| EPI_ISL_18448408 | NSP3 | hCoV-19/Canada/ON-PHL-23-36781/2023 | N | 1177 | B | 11 | 20231019 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | N | 1177 | G | 8 | 20220703 |
| EPI_ISL_17212175 | NSP3 | hCoV-19/USA/MN-ASC-210969229/2023 | N | 1177 | K | 52 | 20230216 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | N | 1177 | L | 2 | 20220812 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | N | 1177 | insLLFGIstop | 1 | 20211012 |
| EPI_ISL_13346221 | NSP3 | hCoV-19/USA/ID-IBL-824804/2022 | N | 1177 | insLLFACstop | 1 | 20220601 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | N | 1177 | insY | 1 | 20220630 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | N | 1177 | E | 1 | 20220628 |
| EPI_ISL_2349177 | NSP3 | hCoV-19/Greece/194338/2021 | N | 1177 | R | 1 | 20210423 |
| EPI_ISL_19612635 | NSP3 | hCoV-19/Finland/THL-08405/2024 | N | 1177 | S | 188 | 20241017 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1177 | A | 3 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1177 | P | 1 | 20210318 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | N | 1177 | Q | 1 | 20200729 |
| EPI_ISL_19549204 | NSP3 | hCoV-19/Canada/AB-ABPHL-126717/2024 | N | 1177 | H | 377 | 20241104 |
| EPI_ISL_13346221 | NSP3 | hCoV-19/USA/ID-IBL-824804/2022 | N | 1178 | Q | 2 | 20220601 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | N | 1178 | V | 1 | 20210418 |
| EPI_ISL_19828081 | NSP3 | hCoV-19/USA/CA-CDPH-500146475/2025 | N | 1178 | K | 281 | 20250222 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | N | 1178 | F | 2 | 20220228 |
| EPI_ISL_13541883 | NSP3 | hCoV-19/USA/MA-CDC-LC0713470/2022 | N | 1178 | R | 9 | 20220612 |
| EPI_ISL_17596524 | NSP3 | hCoV-19/Thailand/NIC_BKK_1229/2023 | N | 1178 | Y | 27 | 20230410 |
| EPI_ISL_13871264 | NSP3 | hCoV-19/USA/ID-IBL-834313/2022 | N | 1178 | G | 16 | 20220705 |
| EPI_ISL_19650621 | NSP3 | hCoV-19/Canada/QC-L00825647001/2024 | N | 1178 | S | 172 | 20241215 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | N | 1178 | insCYL | 1 | 20230209 |
| EPI_ISL_1875294 | NSP3 | hCoV-19/Denmark/DCGC-66723/2021 | N | 1178 | E | 89 | 20210315 |
| EPI_ISL_15236207 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00015337_01/2022 | N | 1178 | H | 11 | 20220820 |
| EPI_ISL_18831891 | NSP3 | hCoV-19/England/CLIMB-CM7YGAAD/2024 | N | 1178 | T | 86 | 20240116 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | N | 1178 | insFLACstop | 1 | 20210114 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | N | 1178 | stop | 3 | 20230123 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | N | 1178 | P | 2 | 20221012 |
| EPI_ISL_19381030 | NSP3 | hCoV-19/Germany/NI-RKI-I-1144819/2024 | N | 1178 | D | 53 | 20240813 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | N | 1178 | del | 50 | 20231009 |
| EPI_ISL_13488963 | NSP3 | hCoV-19/Canada/ON-KHS-22-02570-v1/2022 | N | 1178 | B | 4 | 20220227 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | N | 1178 | insYstopLstopTLHTLFstopERSstopI | 1 | 20210823 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | N | 1178 | L | 27 | 20221204 |
| EPI_ISL_14881077 | NSP3 | hCoV-19/USA/ID-IBL-847392/2022 | N | 1178 | M | 7 | 20220822 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | N | 1178 | A | 1 | 20210420 |
| EPI_ISL_12321617 | NSP3 | hCoV-19/Turkey/HSGM-GS2551/2022 | N | 1178 | I | 4 | 20220405 |
| EPI_ISL_8882805 | NSP3 | hCoV-19/India/GA-NCCS-VH78087/2021 | A | 1179 | M | 1 | 20210626 |
| EPI_ISL_17957111 | NSP3 | hCoV-19/Shanghai/SCDC-XG06-9242/2023 | A | 1179 | E | 11 | 20230620 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | A | 1179 | del | 53 | 20231009 |
| EPI_ISL_19827115 | NSP3 | hCoV-19/Chile/RM-ISPC-26321/2025 | A | 1179 | T | 592 | 20250327 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | A | 1179 | insstopLstop | 6 | 20220703 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | A | 1179 | F | 3 | 20230123 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | A | 1179 | C | 3 | 20220628 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | A | 1179 | L | 38 | 20221204 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | A | 1179 | insLL | 1 | 20210118 |
| EPI_ISL_15010512 | NSP3 | hCoV-19/England/PLYM-15204AA2/2022 | A | 1179 | G | 9 | 20220911 |
| EPI_ISL_19832696 | NSP3 | hCoV-19/USA/IA-SHL-2614173/2025 | A | 1179 | V | 18993 | 20250409 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | A | 1179 | H | 1 | 20210418 |
| EPI_ISL_19563694 | NSP3 | hCoV-19/Netherlands/GE-RIVM-143173/2024 | A | 1179 | S | 291 | 20241010 |
| EPI_ISL_12753118 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726728613/2022 | A | 1179 | Q | 126 | 20220204 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 1179 | N | 1 | 20210318 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | A | 1179 | W | 1 | 20200606 |
| EPI_ISL_13563930 | NSP3 | hCoV-19/USA/ID-IBL-824967/2022 | A | 1179 | I | 3 | 20220602 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | A | 1179 | K | 6 | 20221012 |
| EPI_ISL_13871235 | NSP3 | hCoV-19/USA/ID-IBL-833166/2022 | A | 1179 | stop | 3 | 20220630 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | A | 1179 | Y | 7 | 20220703 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | A | 1179 | insFDVLK | 1 | 20230401 |
| EPI_ISL_18456550 | NSP3 | hCoV-19/USA/CA-CDPH-500126875/2023 | A | 1179 | R | 1 | 20231002 |
| EPI_ISL_19280435 | NSP3 | hCoV-19/Italy/LOM-UNIBS-07169704/2024 | A | 1179 | P | 15 | 20240715 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | T | 1180 | K | 3 | 20230123 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | T | 1180 | del | 50 | 20231009 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | T | 1180 | V | 1 | 20200606 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | T | 1180 | F | 33 | 20221204 |
| EPI_ISL_19826677 | NSP3 | hCoV-19/env/Germany/BY-LGL-6546315/2025 | T | 1180 | P | 9 | 20250326 |
| EPI_ISL_16635397 | NSP3 | hCoV-19/Zhejiang/IVDC-693/2022 | T | 1180 | L | 11 | 20221206 |
| EPI_ISL_19828204 | NSP3 | hCoV-19/Australia/QLD0x0154ED/2025 | T | 1180 | I | 3949 | 20250324 |
| EPI_ISL_17716047 | NSP3 | hCoV-19/Chile/AT-37483/2023 | T | 1180 | insXXXXX | 1 | 20230504 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 1180 | E | 1 | 20220812 |
| EPI_ISL_19831350 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56849/2025 | T | 1180 | N | 105 | 20250326 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | T | 1180 | Y | 1 | 20210803 |
| EPI_ISL_12215599 | NSP3 | hCoV-19/France/IDF-AphpSA-KC000608/2021 | T | 1180 | R | 1 | 20211227 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | T | 1180 | C | 3 | 20210114 |
| EPI_ISL_19658247 | NSP3 | hCoV-19/USA/CO-CDPHE-42686882/2024 | T | 1180 | A | 64 | 20241224 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | T | 1180 | W | 1 | 20210418 |
| EPI_ISL_19415144 | NSP3 | hCoV-19/env/Germany/BY-LGL-6333342/2024 | T | 1180 | S | 15 | 20240821 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | T | 1180 | insstop | 1 | 20220112 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | T | 1180 | Q | 7 | 20210809 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | T | 1180 | stop | 3 | 20220531 |
| EPI_ISL_5084801 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-44543/2020 | T | 1180 | D | 1 | 20200728 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | N | 1181 | C | 1 | 20210803 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | N | 1181 | L | 6 | 20220703 |
| EPI_ISL_18778001 | NSP3 | hCoV-19/USA/HI-H2326872/2023 | N | 1181 | I | 24 | 20231228 |
| EPI_ISL_18930367 | NSP3 | hCoV-19/Fujian/FCDC-ND0479/2024 | N | 1181 | T | 95 | 20240220 |
| EPI_ISL_13346221 | NSP3 | hCoV-19/USA/ID-IBL-824804/2022 | N | 1181 | stop | 5 | 20220601 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | N | 1181 | A | 2 | 20230209 |
| EPI_ISL_15000214 | NSP3 | hCoV-19/USA/FL-CDC-STM-9YKANPY8A/2022 | N | 1181 | Y | 2 | 20220901 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | N | 1181 | del | 61 | 20231009 |
| EPI_ISL_2383172 | NSP3 | hCoV-19/USA/LA-EVTL2880/2021 | N | 1181 | F | 1 | 20210521 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | N | 1181 | V | 1 | 20210418 |
| EPI_ISL_19584717 | NSP3 | hCoV-19/Japan/NCGM-03138/2022 | N | 1181 | insWADNNC | 1 | 20220409 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1181 | P | 3 | 20220210 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | N | 1181 | G | 29 | 20221204 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | N | 1181 | M | 1 | 20210806 |
| EPI_ISL_17519175 | NSP3 | hCoV-19/Germany/BY-RKI-I-1132200/2023 | N | 1181 | D | 475 | 20230405 |
| EPI_ISL_19116454 | NSP3 | hCoV-19/USA/KY-KSPHL-0011207/2024 | N | 1181 | H | 3 | 20240405 |
| EPI_ISL_19812008 | NSP3 | hCoV-19/Australia/QLD0x015403/2025 | N | 1181 | S | 461 | 20250303 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | N | 1181 | E | 2 | 20230401 |
| EPI_ISL_15666673 | NSP3 | hCoV-19/Canada/AB-ABPHL-82941/2022 | N | 1181 | B | 9 | 20221012 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | N | 1181 | K | 46 | 20240109 |
| EPI_ISL_13871263 | NSP3 | hCoV-19/USA/ID-IBL-834305/2022 | K | 1182 | F | 1 | 20220705 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | K | 1182 | I | 11 | 20230605 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | K | 1182 | D | 3 | 20230401 |
| EPI_ISL_19439070 | NSP3 | hCoV-19/USA/CO-CDPHE-42241453/2024 | K | 1182 | N | 41 | 20240823 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | K | 1182 | Q | 13 | 20220112 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | K | 1182 | A | 3 | 20220228 |
| EPI_ISL_10306120 | NSP3 | hCoV-19/India/KA-CBR-1402CTD064/2022 | K | 1182 | insATNN | 4 | 20220207 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | K | 1182 | H | 5 | 20220703 |
| EPI_ISL_18255102 | NSP3 | hCoV-19/Pakistan/PACP-B13-S04/2023 | K | 1182 | stop | 6 | 20230313 |
| EPI_ISL_19240855 | NSP3 | hCoV-19/USA/WA-GBW-GKISBBBC97682/2024 | K | 1182 | T | 9 | 20240626 |
| EPI_ISL_7856451 | NSP3 | hCoV-19/USA/LA-OD-4115316/2021 | K | 1182 | P | 2 | 20211213 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | K | 1182 | S | 2 | 20210118 |
| EPI_ISL_19810436 | NSP3 | hCoV-19/Portugal/PT52416/2025 | K | 1182 | R | 230 | 20250307 |
| EPI_ISL_18454295 | NSP3 | hCoV-19/Thailand/NIC_SKA_8195/2023 | K | 1182 | W | 5 | 20231020 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | K | 1182 | insGHTDLM | 1 | 20220506 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | K | 1182 | del | 71 | 20231009 |
| EPI_ISL_13978955 | NSP3 | hCoV-19/USA/NC-CDC-LC0770305/2022 | K | 1182 | E | 7 | 20220711 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | K | 1182 | L | 4 | 20230209 |
| EPI_ISL_5084801 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-44543/2020 | K | 1182 | V | 1 | 20200728 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | K | 1182 | Y | 1 | 20220104 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | K | 1182 | M | 25 | 20221204 |
| EPI_ISL_13871238 | NSP3 | hCoV-19/USA/ID-IBL-833220/2022 | A | 1183 | I | 3 | 20220630 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | A | 1183 | insstopSY | 1 | 20220628 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | A | 1183 | del | 70 | 20231009 |
| EPI_ISL_2648188 | NSP3 | hCoV-19/USA/LA-EVTL3125/2021 | A | 1183 | F | 1 | 20210609 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | A | 1183 | K | 1 | 20200606 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | A | 1183 | C | 4 | 20220228 |
| EPI_ISL_8054734 | NSP3 | hCoV-19/France/GES-HMN-21122160217/2021 | A | 1183 | G | 4 | 20211213 |
| EPI_ISL_13282077 | NSP3 | hCoV-19/USA/ID-IBL-656843/2020 | A | 1183 | H | 1 | 20200915 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | A | 1183 | L | 39 | 20230209 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | A | 1183 | Y | 5 | 20221012 |
| EPI_ISL_2086693 | NSP3 | hCoV-19/USA/OR-OSPHL00493/2021 | A | 1183 | R | 1 | 20210430 |
| EPI_ISL_19794855 | NSP3 | hCoV-19/Spain/CT-HUGTiP-G1R207/2025 | A | 1183 | T | 3331 | 20250318 |
| EPI_ISL_10943874 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8940/2022 | A | 1183 | E | 4 | 20220209 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | A | 1183 | P | 22 | 20240109 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 1183 | insD | 1 | 20230217 |
| EPI_ISL_15734351 | NSP3 | hCoV-19/USA/ID-IBL-862835/2022 | A | 1183 | stop | 4 | 20221020 |
| EPI_ISL_4530175 | NSP3 | hCoV-19/England/PHEC-3G072G79/2021 | A | 1183 | N | 3 | 20210919 |
| EPI_ISL_8882805 | NSP3 | hCoV-19/India/GA-NCCS-VH78087/2021 | A | 1183 | Q | 1 | 20210626 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | A | 1183 | insKHLLKA | 1 | 20210418 |
| EPI_ISL_19802464 | NSP3 | hCoV-19/USA/CO-CDPHE-43205489/2025 | A | 1183 | V | 1743 | 20250303 |
| EPI_ISL_19377572 | NSP3 | hCoV-19/Japan/FR047-0633/2024 | A | 1183 | S | 209 | 20240813 |
| EPI_ISL_19125457 | NSP3 | hCoV-19/Japan/FR062-0095/2024 | A | 1183 | D | 472 | 20240421 |
| EPI_ISL_13871238 | NSP3 | hCoV-19/USA/ID-IBL-833220/2022 | T | 1184 | N | 5 | 20220630 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | T | 1184 | R | 8 | 20240109 |
| EPI_ISL_12544527 | NSP3 | hCoV-19/Indonesia/LA-NIHRD-WGS.22.04370/2022 | T | 1184 | E | 3 | 20220403 |
| EPI_ISL_17850636 | NSP3 | hCoV-19/Liaoning/LNCDC-157-3/2023 | T | 1184 | S | 18 | 20230516 |
| EPI_ISL_17735477 | NSP3 | hCoV-19/Thailand/NIC_SNI_4316/2023 | T | 1184 | L | 15 | 20230402 |
| EPI_ISL_18226348 | NSP3 | hCoV-19/env/India/MH-FMR_K4-55a/2023 | T | 1184 | insMQLIK | 1 | 20230315 |
| EPI_ISL_19671010 | NSP3 | hCoV-19/USA/UT-UPHL-250110734665/2024 | T | 1184 | A | 69 | 20241227 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | T | 1184 | stop | 1 | 20220117 |
| EPI_ISL_18914969 | NSP3 | hCoV-19/env/Ukraine/80860/2023 | T | 1184 | del | 66 | 20231009 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | T | 1184 | Q | 5 | 20230401 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | T | 1184 | G | 1 | 20210418 |
| EPI_ISL_18454295 | NSP3 | hCoV-19/Thailand/NIC_SKA_8195/2023 | T | 1184 | D | 1 | 20231020 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1184 | Y | 1 | 20221012 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | T | 1184 | C | 2 | 20210823 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | T | 1184 | V | 7 | 20230217 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | T | 1184 | insstop | 1 | 20200805 |
| EPI_ISL_18247091 | NSP3 | hCoV-19/USA/MS-MSPHL-0477/2023 | T | 1184 | K | 10 | 20230828 |
| EPI_ISL_13306899 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3951/2022 | T | 1184 | W | 2 | 20220503 |
| EPI_ISL_11664546 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3410/2022 | T | 1184 | P | 1 | 20220225 |
| EPI_ISL_17715981 | NSP3 | hCoV-19/Chile/RM-36617/2023 | T | 1184 | H | 7 | 20230503 |
| EPI_ISL_13871263 | NSP3 | hCoV-19/USA/ID-IBL-834305/2022 | T | 1184 | I | 4 | 20220705 |
| EPI_ISL_12694384 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471490/2022 | T | 1184 | insMQL | 3 | 20220126 |
| EPI_ISL_19801670 | NSP3 | hCoV-19/USA/KY-KSPHL-0037266/2024 | T | 1184 | M | 1710 | 20241226 |
| EPI_ISL_16368886 | NSP3 | hCoV-19/Malaysia/HPUPM_NGS0713/2022 | Y | 1185 | W | 1 | 20221104 |
| EPI_ISL_16925981 | NSP3 | hCoV-19/Thailand/NIC_CMI_625/2023 | Y | 1185 | T | 1 | 20230123 |
| EPI_ISL_13306899 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3951/2022 | Y | 1185 | D | 3 | 20220503 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | Y | 1185 | M | 24 | 20221204 |
| EPI_ISL_16368886 | NSP3 | hCoV-19/Malaysia/HPUPM_NGS0713/2022 | Y | 1185 | insTARHLVMIASX | 1 | 20221104 |
| EPI_ISL_4761460 | NSP3 | hCoV-19/Australia/VIC19174/2021 | Y | 1185 | insQLstopSHV | 1 | 20210728 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | Y | 1185 | R | 2 | 20220305 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Y | 1185 | K | 3 | 20221012 |
| EPI_ISL_17715979 | NSP3 | hCoV-19/Chile/RM-35939/2023 | Y | 1185 | del | 71 | 20230502 |
| EPI_ISL_19643622 | NSP3 | hCoV-19/USA/TX-HMH-M-146702/2024 | Y | 1185 | H | 168 | 20241013 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | Y | 1185 | insQLI | 5 | 20221204 |
| EPI_ISL_3922925 | NSP3 | hCoV-19/USA/ID-IBL-749565/2021 | Y | 1185 | V | 4 | 20210813 |
| EPI_ISL_11313558 | NSP3 | hCoV-19/Israel/SMC-7049003/2022 | Y | 1185 | insQLIKPR | 1 | 20220301 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | Y | 1185 | I | 55 | 20240109 |
| EPI_ISL_19699510 | NSP3 | hCoV-19/USA/CA-PFZ03328/2024 | Y | 1185 | F | 93 | 20241226 |
| EPI_ISL_19826413 | NSP3 | hCoV-19/Canada/ON-SHL-202501483/2025 | Y | 1185 | C | 1653 | 20250328 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1185 | Q | 2 | 20210318 |
| EPI_ISL_15244350 | NSP3 | hCoV-19/USA/UT-UPHL-220804205828/2022 | Y | 1185 | stop | 41 | 20220716 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | Y | 1185 | G | 1 | 20230401 |
| EPI_ISL_17735477 | NSP3 | hCoV-19/Thailand/NIC_SNI_4316/2023 | Y | 1185 | L | 7 | 20230402 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | Y | 1185 | insQQIELKFNPPG | 1 | 20230209 |
| EPI_ISL_18513828 | NSP3 | hCoV-19/Australia/NSW-ICPMR-50936/2023 | Y | 1185 | N | 3572 | 20231030 |
| EPI_ISL_19520825 | NSP3 | hCoV-19/South Korea/KDCA296183/2024 | Y | 1185 | S | 15 | 20241007 |
| EPI_ISL_17715979 | NSP3 | hCoV-19/Chile/RM-35939/2023 | K | 1186 | del | 69 | 20230502 |
| EPI_ISL_19334625 | NSP3 | hCoV-19/Egypt/CPHL-EGY24144/2024 | K | 1186 | T | 60 | 20240623 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | K | 1186 | insstopNQI | 1 | 20220104 |
| EPI_ISL_1051602 | NSP3 | hCoV-19/England/OXON-F5C789/2021 | K | 1186 | insI | 1 | 20210123 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | K | 1186 | insLIS | 1 | 20210730 |
| EPI_ISL_15388070 | NSP3 | hCoV-19/Morocco/FMP411/2021 | K | 1186 | insHV | 1 | 20211227 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | K | 1186 | A | 2 | 20220228 |
| EPI_ISL_17400389 | NSP3 | hCoV-19/England/BRBR-32715F0B/2023 | K | 1186 | E | 24 | 20230326 |
| EPI_ISL_16488044 | NSP3 | hCoV-19/Germany/NW-RKI-I-1077486/2023 | K | 1186 | I | 17 | 20230102 |
| EPI_ISL_16625040 | NSP3 | hCoV-19/Latvia/22613847/2022 | K | 1186 | L | 4 | 20220921 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | K | 1186 | C | 3 | 20230605 |
| EPI_ISL_14488458 | NSP3 | hCoV-19/USA/ID-IBL-843615/2022 | K | 1186 | Q | 34 | 20220805 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | K | 1186 | Y | 1 | 20200805 |
| EPI_ISL_13114513 | NSP3 | hCoV-19/USA/TX-HMH-M-98228/2022 | K | 1186 | insLIKPRIstop | 1 | 20220520 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | K | 1186 | insQI | 5 | 20240109 |
| EPI_ISL_17776598 | NSP3 | hCoV-19/Germany/BB-RKI-I-1136442/2023 | K | 1186 | insSEEHTSE | 16 | 20230425 |
| EPI_ISL_15244350 | NSP3 | hCoV-19/USA/UT-UPHL-220804205828/2022 | K | 1186 | S | 3 | 20220716 |
| EPI_ISL_4311735 | NSP3 | hCoV-19/England/PHEC-Z304Z8A7/2021 | K | 1186 | insLIA | 1 | 20210905 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | K | 1186 | N | 17 | 20240109 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | K | 1186 | D | 1 | 20220305 |
| EPI_ISL_19809891 | NSP3 | hCoV-19/USA/NY-PRL-250325_81G07/2025 | K | 1186 | R | 1249 | 20250315 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | K | 1186 | H | 1 | 20210420 |
| EPI_ISL_17735477 | NSP3 | hCoV-19/Thailand/NIC_SNI_4316/2023 | K | 1186 | V | 23 | 20230402 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | K | 1186 | stop | 8 | 20220703 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | K | 1186 | M | 2 | 20230401 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | K | 1186 | P | 1 | 20220628 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | K | 1186 | insLIXXXXX | 1 | 20210805 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | K | 1186 | insK | 1 | 20210803 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | K | 1186 | insLIXXHVstopX | 8 | 20211227 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | P | 1187 | insI | 2 | 20220321 |
| EPI_ISL_8193590 | NSP3 | hCoV-19/Egypt/NRC-7068/2020 | P | 1187 | insRINS | 1 | 20201108 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | P | 1187 | Y | 1 | 20220117 |
| EPI_ISL_2223758 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-40575/2020 | P | 1187 | insRIK | 1 | 20200802 |
| EPI_ISL_4311735 | NSP3 | hCoV-19/England/PHEC-Z304Z8A7/2021 | P | 1187 | H | 1 | 20210905 |
| EPI_ISL_19824930 | NSP3 | hCoV-19/USA/NY-GBW-GKISBBBF07575/2025 | P | 1187 | S | 1292 | 20250331 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1187 | R | 1 | 20220210 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | P | 1187 | I | 3 | 20220108 |
| EPI_ISL_17715979 | NSP3 | hCoV-19/Chile/RM-35939/2023 | P | 1187 | del | 78 | 20230502 |
| EPI_ISL_12584033 | NSP3 | hCoV-19/Turkey/HSGM-G8675/2022 | P | 1187 | insA | 2 | 20220407 |
| EPI_ISL_4530188 | NSP3 | hCoV-19/England/PHEC-3G073G85/2021 | P | 1187 | V | 2 | 20210919 |
| EPI_ISL_16625040 | NSP3 | hCoV-19/Latvia/22613847/2022 | P | 1187 | E | 10 | 20220921 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | P | 1187 | D | 4 | 20230401 |
| EPI_ISL_19539567 | NSP3 | hCoV-19/Turkey/DEU-S45/2020 | P | 1187 | insNTWCIRCLW | 1 | 20200821 |
| EPI_ISL_19642100 | NSP3 | hCoV-19/USA/CA-PFZ01244/2024 | P | 1187 | T | 55 | 20240909 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | P | 1187 | C | 2 | 20210823 |
| EPI_ISL_19564373 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08969/2024 | P | 1187 | A | 18 | 20241113 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | P | 1187 | K | 3 | 20230209 |
| EPI_ISL_2382525 | NSP3 | hCoV-19/USA/OR-OSPHL00758/2021 | P | 1187 | insRI | 1 | 20210514 |
| EPI_ISL_2086693 | NSP3 | hCoV-19/USA/OR-OSPHL00493/2021 | P | 1187 | G | 2 | 20210430 |
| EPI_ISL_14333789 | NSP3 | hCoV-19/USA/ID-IBL-839589/2022 | P | 1187 | F | 4 | 20220726 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | P | 1187 | insYI | 1 | 20210730 |
| EPI_ISL_13871238 | NSP3 | hCoV-19/USA/ID-IBL-833220/2022 | P | 1187 | stop | 4 | 20220630 |
| EPI_ISL_19751888 | NSP3 | hCoV-19/Denmark/DCGC-691820/2025 | P | 1187 | Q | 355 | 20250203 |
| EPI_ISL_19734974 | NSP3 | hCoV-19/USA/MN-MDH-45975/2025 | P | 1187 | L | 829 | 20250127 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | P | 1187 | W | 1 | 20210420 |
| EPI_ISL_11173643 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-72343/2021 | P | 1187 | insRINX | 1 | 20211223 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | N | 1188 | insstopstopSHVstop | 1 | 20210803 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | N | 1188 | E | 1 | 20220228 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | N | 1188 | R | 16 | 20221204 |
| EPI_ISL_4198511 | NSP3 | hCoV-19/Italy/SAR-3119/2021 | N | 1188 | insI | 1 | 20210902 |
| EPI_ISL_17735477 | NSP3 | hCoV-19/Thailand/NIC_SNI_4316/2023 | N | 1188 | S | 11 | 20230402 |
| EPI_ISL_15734351 | NSP3 | hCoV-19/USA/ID-IBL-862835/2022 | N | 1188 | H | 10 | 20221020 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | N | 1188 | Q | 1 | 20220305 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | N | 1188 | V | 2 | 20210420 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | N | 1188 | insLMYstop | 1 | 20210809 |
| EPI_ISL_7170488 | NSP3 | hCoV-19/USA/MA-UMASSMED-205579563/2021 | N | 1188 | Y | 5 | 20211006 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | N | 1188 | insD | 1 | 20210801 |
| EPI_ISL_16375968 | NSP3 | hCoV-19/Brazil/MT-LACENMT-510494466/2022 | N | 1188 | P | 2 | 20221111 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | N | 1188 | insSstopIVTstop | 5 | 20220703 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | N | 1188 | C | 1 | 20210212 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | N | 1188 | L | 3 | 20220628 |
| EPI_ISL_19334633 | NSP3 | hCoV-19/Egypt/CPHL-EGY24155/2024 | N | 1188 | K | 13 | 20240625 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | N | 1188 | A | 1 | 20200606 |
| EPI_ISL_16282440 | NSP3 | hCoV-19/Canary Islands/HUGCDN-03123179/2022 | N | 1188 | insIT | 1 | 20221103 |
| EPI_ISL_14288020 | NSP3 | hCoV-19/USA/ID-IBL-839535/2022 | N | 1188 | stop | 9 | 20220725 |
| EPI_ISL_17715979 | NSP3 | hCoV-19/Chile/RM-35939/2023 | N | 1188 | del | 69 | 20230502 |
| EPI_ISL_12694432 | NSP3 | hCoV-19/Russia/CHU-CRIE-7725793896/2022 | N | 1188 | D | 3 | 20220118 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | N | 1188 | insstopstop | 1 | 20210212 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | N | 1188 | I | 35 | 20230209 |
| EPI_ISL_19769177 | NSP3 | hCoV-19/USA/NY-USAFSAM-S23463/2025 | N | 1188 | G | 27 | 20250219 |
| EPI_ISL_17605351 | NSP3 | hCoV-19/Thailand/NIC_BKK_1595/2023 | N | 1188 | T | 17 | 20230425 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | N | 1188 | insFIVTstop | 1 | 20210813 |
| EPI_ISL_12271448 | NSP3 | hCoV-19/France/IDF-HMN-22042131176/2022 | N | 1188 | B | 3 | 20220413 |
| EPI_ISL_9093146 | NSP3 | hCoV-19/USA/ID-IBL-781952/2021 | T | 1189 | Q | 1 | 20211220 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | T | 1189 | F | 1 | 20210212 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | T | 1189 | L | 6 | 20230401 |
| EPI_ISL_17715979 | NSP3 | hCoV-19/Chile/RM-35939/2023 | T | 1189 | del | 63 | 20230502 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | T | 1189 | P | 2 | 20210418 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | T | 1189 | D | 1 | 20210315 |
| EPI_ISL_19690695 | NSP3 | hCoV-19/Netherlands/OV-RIVM-144896/2025 | T | 1189 | N | 271 | 20250110 |
| EPI_ISL_16625040 | NSP3 | hCoV-19/Latvia/22613847/2022 | T | 1189 | K | 5 | 20220921 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | T | 1189 | C | 1 | 20220228 |
| EPI_ISL_13125333 | NSP3 | hCoV-19/USA/ID-IBL-650332/2020 | T | 1189 | stop | 1 | 20200901 |
| EPI_ISL_19824225 | NSP3 | hCoV-19/USA/IL-RIPHL_33512_G/2025 | T | 1189 | I | 28261 | 20250324 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | T | 1189 | V | 14 | 20240109 |
| EPI_ISL_18250134 | NSP3 | hCoV-19/env/Germany/BY-LGL-5977113/2023 | T | 1189 | S | 13 | 20230821 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | T | 1189 | H | 3 | 20220321 |
| EPI_ISL_19803905 | NSP3 | hCoV-19/USA/WI-WSLH-2500399/2025 | T | 1189 | A | 402 | 20250117 |
| EPI_ISL_19583031 | NSP3 | hCoV-19/Japan/NCGM-00832/2022 | T | 1189 | insNQI | 1 | 20220125 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1189 | G | 2 | 20201214 |
| EPI_ISL_1298990 | NSP3 | hCoV-19/Italy/CAM-AMES-39-69/2021 | T | 1189 | M | 1 | 20210304 |
| EPI_ISL_14333789 | NSP3 | hCoV-19/USA/ID-IBL-839589/2022 | T | 1189 | Y | 1 | 20220726 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | W | 1190 | D | 1 | 20201214 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | W | 1190 | N | 8 | 20221204 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | W | 1190 | I | 3 | 20230605 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | W | 1190 | Y | 30 | 20240109 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | W | 1190 | Q | 1 | 20210809 |
| EPI_ISL_12189184 | NSP3 | hCoV-19/Germany/BW-RKI-I-720696/2022 | W | 1190 | stop | 2 | 20220203 |
| EPI_ISL_16553644 | NSP3 | hCoV-19/Germany/RP-USAFSAM-S20984/2022 | W | 1190 | T | 7 | 20221219 |
| EPI_ISL_12694368 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726467116/2022 | W | 1190 | insQIPGN | 1 | 20220124 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | W | 1190 | insP | 2 | 20230605 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | W | 1190 | F | 2 | 20230209 |
| EPI_ISL_13812304 | NSP3 | hCoV-19/USA/ID-IBL-832292/2022 | W | 1190 | insstopLstop | 1 | 20220628 |
| EPI_ISL_19225648 | NSP3 | hCoV-19/env/Germany/BY-LGL-6262260/2024 | W | 1190 | del | 70 | 20240605 |
| EPI_ISL_19181099 | NSP3 | hCoV-19/Singapore/R31MQ183/2024 | W | 1190 | R | 20 | 20240524 |
| EPI_ISL_15292737 | NSP3 | hCoV-19/India/GA-NCCS-3055200222104/2021 | W | 1190 | M | 1 | 20211216 |
| EPI_ISL_15827293 | NSP3 | hCoV-19/USA/NY-PRL-221111_00H08/2022 | W | 1190 | L | 40 | 20221105 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | W | 1190 | V | 2 | 20230217 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | W | 1190 | A | 1 | 20230401 |
| EPI_ISL_15297595 | NSP3 | hCoV-19/Russia/IVA-RII-MH87560S/2022 | W | 1190 | G | 10 | 20220907 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | W | 1190 | P | 1 | 20210420 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | W | 1190 | K | 3 | 20210803 |
| EPI_ISL_13307025 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3977/2022 | W | 1190 | S | 5 | 20220506 |
| EPI_ISL_19191245 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBC51676/2024 | W | 1190 | C | 84 | 20240514 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | C | 1191 | E | 1 | 20220305 |
| EPI_ISL_19082499 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140316/2024 | C | 1191 | del | 48 | 20240305 |
| EPI_ISL_19826670 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528522/2025 | C | 1191 | F | 133 | 20250402 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | C | 1191 | insF | 2 | 20220131 |
| EPI_ISL_13125333 | NSP3 | hCoV-19/USA/ID-IBL-650332/2020 | C | 1191 | insCFYNstopstop | 1 | 20200901 |
| EPI_ISL_19579139 | NSP3 | hCoV-19/Japan/NCGM-05773/2022 | C | 1191 | L | 7 | 20220808 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | C | 1191 | insLACstop | 2 | 20221224 |
| EPI_ISL_9010783 | NSP3 | hCoV-19/Denmark/DCGC-323634/2022 | C | 1191 | G | 8 | 20220107 |
| EPI_ISL_18643243 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69542859/2023 | C | 1191 | R | 5 | 20231212 |
| EPI_ISL_17616426 | NSP3 | hCoV-19/Ethiopia/CO_GX_207/2022 | C | 1191 | Y | 6 | 20220628 |
| EPI_ISL_3078866 | NSP3 | hCoV-19/England/OXON-FA1415/2021 | C | 1191 | insLACstopQCNstop | 1 | 20210709 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | C | 1191 | Q | 7 | 20221204 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | C | 1191 | I | 1 | 20220228 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | C | 1191 | W | 2 | 20230413 |
| EPI_ISL_8804048 | NSP3 | hCoV-19/India/GA-NCCS-3055100215281/2021 | C | 1191 | insYVVFGAQNQLKHQ | 1 | 20210721 |
| EPI_ISL_12215599 | NSP3 | hCoV-19/France/IDF-AphpSA-KC000608/2021 | C | 1191 | A | 2 | 20211227 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | C | 1191 | K | 2 | 20210420 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | C | 1191 | insVFGAQNQLKHQ | 1 | 20240109 |
| EPI_ISL_18811057 | NSP3 | hCoV-19/Sweden/U-R259828/2023 | C | 1191 | S | 129 | 20231227 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | C | 1191 | insS | 1 | 20210806 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | C | 1191 | H | 3 | 20221201 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | C | 1191 | V | 9 | 20240109 |
| EPI_ISL_15734351 | NSP3 | hCoV-19/USA/ID-IBL-862835/2022 | C | 1191 | stop | 3 | 20221020 |
| EPI_ISL_19822278 | NSP3 | hCoV-19/USA/CA-GBW-GKPLAAAA40076/2025 | I | 1192 | T | 2717 | 20250330 |
| EPI_ISL_19067053 | NSP3 | hCoV-19/Chile/RM-USACH-00552/2023 | I | 1192 | L | 42 | 20231120 |
| EPI_ISL_19804897 | NSP3 | hCoV-19/USA/RI-USAFSAM-S23525/2025 | I | 1192 | V | 3070 | 20250311 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | I | 1192 | S | 3 | 20230605 |
| EPI_ISL_14288020 | NSP3 | hCoV-19/USA/ID-IBL-839535/2022 | I | 1192 | A | 3 | 20220725 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | I | 1192 | insVY | 1 | 20200805 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | I | 1192 | insPGI | 1 | 20210806 |
| EPI_ISL_8882807 | NSP3 | hCoV-19/India/GA-NCCS-VH78098/2021 | I | 1192 | insFGAQNQLKHQIRLMYstopSQRT | 2 | 20210626 |
| EPI_ISL_16625040 | NSP3 | hCoV-19/Latvia/22613847/2022 | I | 1192 | stop | 9 | 20220921 |
| EPI_ISL_16372310 | NSP3 | hCoV-19/USA/ID-IBL-871136/2022 | I | 1192 | Y | 2 | 20221226 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | I | 1192 | insLDIT | 1 | 20220305 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | I | 1192 | K | 4 | 20230217 |
| EPI_ISL_14399311 | NSP3 | hCoV-19/South Africa/NICD-N45690/2022 | I | 1192 | R | 3 | 20220525 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | I | 1192 | H | 2 | 20210420 |
| EPI_ISL_19829366 | NSP3 | hCoV-19/USA/CA-CDC-2-8365993/2025 | I | 1192 | M | 995 | 20250210 |
| EPI_ISL_18825532 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17203104/2024 | I | 1192 | J | 5 | 20240102 |
| EPI_ISL_19082499 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140316/2024 | I | 1192 | del | 48 | 20240305 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | I | 1192 | insFGAQNQLKHQIRLMYstopSQRTRRNGstop | 1 | 20220104 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | I | 1192 | F | 5 | 20230209 |
| EPI_ISL_10943874 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8940/2022 | R | 1193 | D | 1 | 20220209 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | R | 1193 | E | 1 | 20210424 |
| EPI_ISL_17982492 | NSP3 | hCoV-19/Ukraine/79834/2023 | R | 1193 | L | 325 | 20230614 |
| EPI_ISL_19654021 | NSP3 | hCoV-19/Estonia/TLCD-33456/2023 | R | 1193 | S | 29 | 20230929 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | R | 1193 | A | 10 | 20220703 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | R | 1193 | T | 4 | 20230217 |
| EPI_ISL_12189184 | NSP3 | hCoV-19/Germany/BW-RKI-I-720696/2022 | R | 1193 | I | 3 | 20220203 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | R | 1193 | N | 7 | 20221201 |
| EPI_ISL_3743160 | NSP3 | hCoV-19/USA/ID-IBL-745673/2021 | R | 1193 | insYYRS | 1 | 20210803 |
| EPI_ISL_14399311 | NSP3 | hCoV-19/South Africa/NICD-N45690/2022 | R | 1193 | W | 1 | 20220525 |
| EPI_ISL_19082499 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140316/2024 | R | 1193 | del | 48 | 20240305 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | R | 1193 | K | 5 | 20230209 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | R | 1193 | V | 3 | 20230605 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | R | 1193 | P | 9 | 20221204 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | R | 1193 | Y | 2 | 20210114 |
| EPI_ISL_19476486 | NSP3 | hCoV-19/USA/CO-CDPHE-42306924/2024 | R | 1193 | C | 211 | 20240826 |
| EPI_ISL_19616289 | NSP3 | hCoV-19/France/GES-RELAB-IPP13070/2024 | R | 1193 | H | 334 | 20241114 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | R | 1193 | Q | 7 | 20210328 |
| EPI_ISL_19753086 | NSP3 | hCoV-19/Shanxi/SXJCCDC-JCCX013/2025 | C | 1194 | S | 87 | 20250108 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | C | 1194 | I | 3 | 20230413 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | C | 1194 | V | 6 | 20220112 |
| EPI_ISL_18446032 | NSP3 | hCoV-19/Spain/CL-44460/2023 | C | 1194 | Y | 46 | 20231005 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | C | 1194 | insstopQCSstopstopSHVstopTKY | 1 | 20210813 |
| EPI_ISL_17089346 | NSP3 | hCoV-19/USA/ID-IBL-875503/2023 | C | 1194 | insC | 2 | 20230209 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | C | 1194 | N | 2 | 20221201 |
| EPI_ISL_12215599 | NSP3 | hCoV-19/France/IDF-AphpSA-KC000608/2021 | C | 1194 | T | 3 | 20211227 |
| EPI_ISL_13466569 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS_22_05012/2022 | C | 1194 | F | 11 | 20220614 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | C | 1194 | insstopQCNstopstopSHVstopTKY | 7 | 20220703 |
| EPI_ISL_12189184 | NSP3 | hCoV-19/Germany/BW-RKI-I-720696/2022 | C | 1194 | stop | 2 | 20220203 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | C | 1194 | insNstopstopSHVstopTKY | 7 | 20210328 |
| EPI_ISL_8193854 | NSP3 | hCoV-19/Egypt/NRC-6445/2020 | C | 1194 | W | 1 | 20200814 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | C | 1194 | D | 1 | 20220228 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | C | 1194 | insGQQ | 1 | 20230217 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | C | 1194 | P | 1 | 20200606 |
| EPI_ISL_13306899 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3951/2022 | C | 1194 | R | 9 | 20220503 |
| EPI_ISL_19082499 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140316/2024 | C | 1194 | del | 32 | 20240305 |
| EPI_ISL_19182031 | NSP3 | hCoV-19/Singapore/R26MQ124/2024 | C | 1194 | G | 38 | 20240508 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | C | 1194 | L | 13 | 20240109 |
| EPI_ISL_18948588 | NSP3 | hCoV-19/South Korea/KDCA286242/2024 | L | 1195 | H | 3 | 20240206 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | L | 1195 | E | 3 | 20210809 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | L | 1195 | stop | 1 | 20210520 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | L | 1195 | A | 4 | 20221201 |
| EPI_ISL_8936192 | NSP3 | hCoV-19/France/GES-HMN-21122211126/2021 | L | 1195 | R | 1 | 20211213 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1195 | N | 1 | 20201214 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | L | 1195 | M | 9 | 20240109 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | L | 1195 | D | 1 | 20210418 |
| EPI_ISL_19082499 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140316/2024 | L | 1195 | del | 26 | 20240305 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | L | 1195 | S | 2 | 20220305 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | L | 1195 | insS | 1 | 20210114 |
| EPI_ISL_17685999 | NSP3 | hCoV-19/USA/TX-HMH-128845/2023 | L | 1195 | F | 88 | 20230508 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | L | 1195 | V | 12 | 20221204 |
| EPI_ISL_12189184 | NSP3 | hCoV-19/Germany/BW-RKI-I-720696/2022 | L | 1195 | Y | 3 | 20220203 |
| EPI_ISL_19579139 | NSP3 | hCoV-19/Japan/NCGM-05773/2022 | L | 1195 | K | 2 | 20220808 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | L | 1195 | insSF | 1 | 20200729 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | L | 1195 | Q | 1 | 20230217 |
| EPI_ISL_19770382 | NSP3 | hCoV-19/Spain/AS-HUCA-232515976/2025 | L | 1195 | J | 11 | 20250224 |
| EPI_ISL_17622377 | NSP3 | hCoV-19/Italy/LOM-ASST-69359768/2023 | L | 1195 | P | 8 | 20230503 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1195 | T | 2 | 20220210 |
| EPI_ISL_19393881 | NSP3 | hCoV-19/Italy/VEN-ULSS2-0818029701_TV/2024 | L | 1195 | I | 60 | 20240818 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | W | 1196 | A | 1 | 20210420 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | W | 1196 | F | 9 | 20221012 |
| EPI_ISL_12215599 | NSP3 | hCoV-19/France/IDF-AphpSA-KC000608/2021 | W | 1196 | K | 1 | 20211227 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | W | 1196 | E | 1 | 20230401 |
| EPI_ISL_17715979 | NSP3 | hCoV-19/Chile/RM-35939/2023 | W | 1196 | del | 30 | 20230502 |
| EPI_ISL_18721790 | NSP3 | hCoV-19/Australia/QLD0x013D21/2023 | W | 1196 | L | 235 | 20231206 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | W | 1196 | V | 19 | 20220703 |
| EPI_ISL_10944005 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8974/2022 | W | 1196 | I | 2 | 20220209 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | W | 1196 | N | 2 | 20230413 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | W | 1196 | S | 10 | 20230605 |
| EPI_ISL_18228559 | NSP3 | hCoV-19/Turkey/HSGM-AA00028/2023 | W | 1196 | stop | 31 | 20230420 |
| EPI_ISL_19805617 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U785-1/2025 | W | 1196 | C | 232 | 20250226 |
| EPI_ISL_18920875 | NSP3 | hCoV-19/USA/OH-CDC-QDX92232057/2024 | W | 1196 | R | 308 | 20240202 |
| EPI_ISL_19579139 | NSP3 | hCoV-19/Japan/NCGM-05773/2022 | W | 1196 | insXXXXXXXX | 1 | 20220808 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | W | 1196 | T | 5 | 20230217 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | W | 1196 | Y | 14 | 20240109 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | W | 1196 | Q | 1 | 20210520 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | W | 1196 | insG | 1 | 20210801 |
| EPI_ISL_19631485 | NSP3 | hCoV-19/Italy/SIC-AOUP-UNIPA_109814/2024 | W | 1196 | G | 27 | 20241203 |
| EPI_ISL_17592088 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3041/2023 | S | 1197 | K | 5 | 20230410 |
| EPI_ISL_19831384 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56883/2025 | S | 1197 | N | 2243 | 20250402 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | S | 1197 | insNstopstopSHVstop | 1 | 20210520 |
| EPI_ISL_8806479 | NSP3 | hCoV-19/India/GA-NCCS-3055100231628/2021 | S | 1197 | A | 8 | 20210823 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | S | 1197 | D | 2 | 20230401 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | S | 1197 | del | 22 | 20230217 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | S | 1197 | V | 4 | 20221204 |
| EPI_ISL_17616426 | NSP3 | hCoV-19/Ethiopia/CO_GX_207/2022 | S | 1197 | insML | 1 | 20220628 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | S | 1197 | P | 1 | 20201214 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | S | 1197 | insGVSVI | 1 | 20220305 |
| EPI_ISL_19553040 | NSP3 | hCoV-19/Canada/QC-L00810119001/2024 | S | 1197 | C | 82 | 20241104 |
| EPI_ISL_19082499 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140316/2024 | S | 1197 | Y | 19 | 20240305 |
| EPI_ISL_18758045 | NSP3 | hCoV-19/Brazil/PR-LACENPR-415471263/2023 | S | 1197 | T | 129 | 20231103 |
| EPI_ISL_19580080 | NSP3 | hCoV-19/Japan/NCGM-04369/2022 | S | 1197 | insKW | 2 | 20220710 |
| EPI_ISL_15415378 | NSP3 | hCoV-19/USA/ID-IBL-858089/2022 | S | 1197 | E | 3 | 20221003 |
| EPI_ISL_18816449 | NSP3 | hCoV-19/USA/TX-HMH-M-137581/2024 | S | 1197 | stop | 9 | 20240109 |
| EPI_ISL_3743163 | NSP3 | hCoV-19/USA/ID-IBL-744790/2021 | S | 1197 | H | 2 | 20210730 |
| EPI_ISL_17744298 | NSP3 | hCoV-19/USA/MO-20MU9599NPS/2021 | S | 1197 | M | 1 | 20210813 |
| EPI_ISL_19692571 | NSP3 | hCoV-19/USA/MN-MDH-45434/2024 | S | 1197 | R | 987 | 20241206 |
| EPI_ISL_19826629 | NSP3 | hCoV-19/USA/NY-PRL-250408_83B06/2025 | S | 1197 | I | 1675 | 20250329 |
| EPI_ISL_19663271 | NSP3 | hCoV-19/Canada/ON-PHL-202500522/2025 | S | 1197 | G | 908 | 20250102 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1197 | L | 4 | 20220210 |
| EPI_ISL_18895547 | NSP3 | hCoV-19/USA/NC-CDC-LC1093909/2024 | T | 1198 | S | 41 | 20240130 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | T | 1198 | del | 22 | 20230217 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | T | 1198 | N | 3 | 20221201 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1198 | E | 1 | 20221012 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1198 | Q | 7 | 20220210 |
| EPI_ISL_18064637 | NSP3 | hCoV-19/Thailand/NIC_BKK_6910/2023 | T | 1198 | H | 7 | 20230624 |
| EPI_ISL_18995337 | NSP3 | hCoV-19/Japan/PG-594560/2024 | T | 1198 | R | 15 | 20240203 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 1198 | Y | 1 | 20210424 |
| EPI_ISL_12156696 | NSP3 | hCoV-19/France/IDF-AphpSA-PA000614/2022 | T | 1198 | stop | 2 | 20220110 |
| EPI_ISL_19829607 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022770_01/2025 | T | 1198 | A | 211 | 20250304 |
| EPI_ISL_19755194 | NSP3 | hCoV-19/USA/MA-MASPHL-13573/2025 | T | 1198 | P | 54 | 20250118 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | T | 1198 | G | 1 | 20220228 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | T | 1198 | insLSLEH | 1 | 20211219 |
| EPI_ISL_19831918 | NSP3 | hCoV-19/England/CLIMB-CM7YGSS4/2025 | T | 1198 | K | 3013 | 20250326 |
| EPI_ISL_19825976 | NSP3 | hCoV-19/Singapore/Y25R15MSC55/2025 | T | 1198 | I | 15461 | 20250407 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | T | 1198 | V | 6 | 20221204 |
| EPI_ISL_7856451 | NSP3 | hCoV-19/USA/LA-OD-4115316/2021 | T | 1198 | M | 1 | 20211213 |
| EPI_ISL_747655 | NSP3 | hCoV-19/Denmark/DCGC-19787/2020 | T | 1198 | D | 1 | 20201207 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | T | 1198 | L | 11 | 20230605 |
| EPI_ISL_19551063 | NSP3 | hCoV-19/Chile/VS-ISPC-83562/2024 | K | 1199 | L | 27 | 20241018 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | K | 1199 | G | 2 | 20220108 |
| EPI_ISL_5882197 | NSP3 | hCoV-19/Thailand/Chiang Rai_SEQ19024/2021 | K | 1199 | S | 2 | 20211018 |
| EPI_ISL_12189184 | NSP3 | hCoV-19/Germany/BW-RKI-I-720696/2022 | K | 1199 | Y | 3 | 20220203 |
| EPI_ISL_19706259 | NSP3 | hCoV-19/Japan/FR012-0014/2025 | K | 1199 | E | 189 | 20250115 |
| EPI_ISL_19333264 | NSP3 | hCoV-19/USA/CO-CDPHE-42084685/2024 | K | 1199 | del | 65 | 20240725 |
| EPI_ISL_19613235 | NSP3 | hCoV-19/Thailand/MTM_01_1769/2024 | K | 1199 | T | 68 | 20240614 |
| EPI_ISL_17616426 | NSP3 | hCoV-19/Ethiopia/CO_GX_207/2022 | K | 1199 | M | 1 | 20220628 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | K | 1199 | D | 4 | 20230605 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | K | 1199 | P | 1 | 20220305 |
| EPI_ISL_12834785 | NSP3 | hCoV-19/USA/CA-HLX-STM-SG96R7X6Y/2021 | K | 1199 | insPRNL | 1 | 20211229 |
| EPI_ISL_19334632 | NSP3 | hCoV-19/Egypt/CPHL-EGY24154/2024 | K | 1199 | stop | 6 | 20240625 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | K | 1199 | F | 3 | 20221204 |
| EPI_ISL_19823808 | NSP3 | hCoV-19/Brazil/TO-FIOCRUZ-643/2025 | K | 1199 | R | 414 | 20250213 |
| EPI_ISL_19465597 | NSP3 | hCoV-19/Canada/QC-L00794811001/2024 | K | 1199 | I | 21 | 20240930 |
| EPI_ISL_19434890 | NSP3 | hCoV-19/India/OR-RMRC_B-ICMR-INSACOG-ILI-2745/2024 | K | 1199 | N | 62 | 20240828 |
| EPI_ISL_19754961 | NSP3 | hCoV-19/USA/NY-NYULH-22273/2025 | K | 1199 | Q | 55 | 20250210 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | K | 1199 | H | 3 | 20230413 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | P | 1200 | D | 1 | 20200606 |
| EPI_ISL_5882197 | NSP3 | hCoV-19/Thailand/Chiang Rai_SEQ19024/2021 | P | 1200 | V | 3 | 20211018 |
| EPI_ISL_19801956 | NSP3 | hCoV-19/USA/MA-MASPHL-13659/2025 | P | 1200 | Q | 167 | 20250209 |
| EPI_ISL_12189184 | NSP3 | hCoV-19/Germany/BW-RKI-I-720696/2022 | P | 1200 | K | 3 | 20220203 |
| EPI_ISL_19826383 | NSP3 | hCoV-19/Canada/ON-PHL-202505079/2025 | P | 1200 | T | 372 | 20250326 |
| EPI_ISL_19333264 | NSP3 | hCoV-19/USA/CO-CDPHE-42084685/2024 | P | 1200 | del | 80 | 20240725 |
| EPI_ISL_19829054 | NSP3 | hCoV-19/USA/NC-CDC-LC1136716/2025 | P | 1200 | S | 13212 | 20250331 |
| EPI_ISL_19145839 | NSP3 | hCoV-19/Japan/TKYnat16945/2024 | P | 1200 | A | 23 | 20240422 |
| EPI_ISL_16626777 | NSP3 | hCoV-19/Latvia/22549171NO/2022 | P | 1200 | R | 7 | 20221025 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | P | 1200 | I | 3 | 20220721 |
| EPI_ISL_19826566 | NSP3 | hCoV-19/USA/NY-PRL-250408_81D04/2025 | P | 1200 | L | 4540 | 20250328 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | P | 1200 | G | 6 | 20230217 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | P | 1200 | Y | 1 | 20210520 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | P | 1200 | F | 1 | 20210420 |
| EPI_ISL_8882805 | NSP3 | hCoV-19/India/GA-NCCS-VH78087/2021 | P | 1200 | E | 2 | 20210626 |
| EPI_ISL_19706529 | NSP3 | hCoV-19/Brazil/SE-FIOCRUZ-106/2025 | V | 1201 | A | 234 | 20250106 |
| EPI_ISL_10943874 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8940/2022 | V | 1201 | S | 2 | 20220209 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | V | 1201 | insL | 1 | 20200729 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | V | 1201 | T | 5 | 20221201 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1201 | K | 1 | 20201214 |
| EPI_ISL_16451090 | NSP3 | hCoV-19/Canada/ON-PHL-23-01729/2023 | V | 1201 | G | 17 | 20230101 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | V | 1201 | insCSVYN | 1 | 20200608 |
| EPI_ISL_19824122 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422284962/2025 | V | 1201 | I | 1563 | 20250327 |
| EPI_ISL_8054550 | NSP3 | hCoV-19/France/IDF-HMN-21122150854/2021 | V | 1201 | E | 1 | 20211215 |
| EPI_ISL_19703681 | NSP3 | hCoV-19/USA/NY-NYULH-21935/2025 | V | 1201 | del | 763 | 20250113 |
| EPI_ISL_19831731 | NSP3 | hCoV-19/Luxembourg/LNS2099336/2025 | V | 1201 | F | 3097 | 20250219 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | V | 1201 | insF | 1 | 20230401 |
| EPI_ISL_10064217 | NSP3 | hCoV-19/USA/LA-OD-8289764469/2022 | V | 1201 | P | 1 | 20220207 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | V | 1201 | insLRK | 2 | 20230413 |
| EPI_ISL_19434890 | NSP3 | hCoV-19/India/OR-RMRC_B-ICMR-INSACOG-ILI-2745/2024 | V | 1201 | L | 61 | 20240828 |
| EPI_ISL_19339605 | NSP3 | hCoV-19/Brazil/RR-023263-IEC/2024 | V | 1201 | D | 5 | 20240524 |
| EPI_ISL_8882805 | NSP3 | hCoV-19/India/GA-NCCS-VH78087/2021 | V | 1201 | H | 2 | 20210626 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | V | 1201 | N | 3 | 20220506 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1201 | W | 1 | 20210318 |
| EPI_ISL_10064217 | NSP3 | hCoV-19/USA/LA-OD-8289764469/2022 | E | 1202 | H | 1 | 20220207 |
| EPI_ISL_19662650 | NSP3 | hCoV-19/Singapore/R60MQ114/2024 | E | 1202 | Z | 9 | 20241101 |
| EPI_ISL_17616426 | NSP3 | hCoV-19/Ethiopia/CO_GX_207/2022 | E | 1202 | I | 2 | 20220628 |
| EPI_ISL_19762463 | NSP3 | hCoV-19/USA/CA-CDPH-6000021232/2024 | E | 1202 | G | 225 | 20241025 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | E | 1202 | Y | 4 | 20230217 |
| EPI_ISL_18437419 | NSP3 | hCoV-19/Brazil/ES-LACENES-321454124/2023 | E | 1202 | Q | 332 | 20230921 |
| EPI_ISL_19096246 | NSP3 | hCoV-19/Wales/CLIMB-CM7YFKZA/2024 | E | 1202 | stop | 9 | 20240422 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | E | 1202 | L | 1 | 20220108 |
| EPI_ISL_12215599 | NSP3 | hCoV-19/France/IDF-AphpSA-KC000608/2021 | E | 1202 | C | 1 | 20211227 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | E | 1202 | S | 1 | 20210809 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | E | 1202 | F | 2 | 20220117 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | E | 1202 | N | 2 | 20220305 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | E | 1202 | R | 8 | 20210807 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | E | 1202 | P | 2 | 20220228 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | E | 1202 | insHK | 14 | 20220321 |
| EPI_ISL_19642897 | NSP3 | hCoV-19/Ukraine/89477/2024 | E | 1202 | D | 169 | 20241126 |
| EPI_ISL_16586001 | NSP3 | hCoV-19/England/PHEC-YY841RK/2023 | E | 1202 | V | 27 | 20230106 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1202 | T | 3 | 20220210 |
| EPI_ISL_19831363 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56862/2025 | E | 1202 | del | 172 | 20250310 |
| EPI_ISL_19022479 | NSP3 | hCoV-19/Russia/SPE-RII-MH168730S/2024 | E | 1202 | A | 68 | 20240221 |
| EPI_ISL_19759807 | NSP3 | hCoV-19/Japan/FR008-0012/2025 | E | 1202 | K | 387 | 20250113 |
| EPI_ISL_18342241 | NSP3 | hCoV-19/USA/CA-LACPHL-AY02562/2023 | T | 1203 | R | 1 | 20230911 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1203 | insVPNQPYP | 1 | 20221012 |
| EPI_ISL_19082499 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140316/2024 | T | 1203 | Y | 4 | 20240305 |
| EPI_ISL_19821888 | NSP3 | hCoV-19/USA/IL-CDC-LC1136388/2025 | T | 1203 | I | 2213 | 20250326 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | T | 1203 | L | 7 | 20230413 |
| EPI_ISL_19665614 | NSP3 | hCoV-19/Canada/QC-L00829494001/2024 | T | 1203 | A | 175 | 20241222 |
| EPI_ISL_19543862 | NSP3 | hCoV-19/Canada/BC-BCCDC-747449/2024 | T | 1203 | K | 43 | 20241023 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | T | 1203 | N | 6 | 20221204 |
| EPI_ISL_5105366 | NSP3 | hCoV-19/Slovenia/5C-036563-KP/2021 | T | 1203 | S | 10 | 20210907 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1203 | F | 1 | 20220210 |
| EPI_ISL_18672309 | NSP3 | hCoV-19/Yunnan/YNCDC-3455/2023 | T | 1203 | P | 9 | 20231120 |
| EPI_ISL_19831363 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56862/2025 | T | 1203 | del | 114 | 20250310 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | T | 1203 | E | 2 | 20220721 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | T | 1203 | stop | 2 | 20210809 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | T | 1203 | V | 2 | 20230123 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | T | 1203 | H | 8 | 20230401 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | T | 1203 | M | 1 | 20221201 |
| EPI_ISL_19827105 | NSP3 | hCoV-19/Chile/VS-ISPC-26161/2025 | S | 1204 | P | 1100 | 20250326 |
| EPI_ISL_19639084 | NSP3 | hCoV-19/USA/MT-MTPHL-4162702/2024 | S | 1204 | A | 102 | 20240920 |
| EPI_ISL_19082499 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140316/2024 | S | 1204 | K | 12 | 20240305 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | S | 1204 | G | 1 | 20230123 |
| EPI_ISL_12175597 | NSP3 | hCoV-19/Russia/RYA-CRIE-S_7724077716/2022 | S | 1204 | R | 8 | 20220125 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | S | 1204 | C | 1 | 20220228 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1204 | F | 1 | 20220210 |
| EPI_ISL_19092375 | NSP3 | hCoV-19/USA/UT-UPHL-240124784207/2023 | S | 1204 | T | 27 | 20231209 |
| EPI_ISL_19530657 | NSP3 | hCoV-19/Poland/WSSERZ-24SNR194/2024 | S | 1204 | Y | 7 | 20240814 |
| EPI_ISL_12215599 | NSP3 | hCoV-19/France/IDF-AphpSA-KC000608/2021 | S | 1204 | E | 2 | 20211227 |
| EPI_ISL_19783484 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGSF1/2025 | S | 1204 | L | 2472 | 20250302 |
| EPI_ISL_10064217 | NSP3 | hCoV-19/USA/LA-OD-8289764469/2022 | S | 1204 | H | 1 | 20220207 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | S | 1204 | Q | 9 | 20230401 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | S | 1204 | V | 4 | 20230217 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | S | 1204 | N | 5 | 20230413 |
| EPI_ISL_19831363 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56862/2025 | S | 1204 | del | 174 | 20250310 |
| EPI_ISL_19819862 | NSP3 | hCoV-19/Spain/AS-HUCA-232523861/2025 | S | 1204 | stop | 10 | 20250324 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | N | 1205 | G | 4 | 20220721 |
| EPI_ISL_14111183 | NSP3 | hCoV-19/Australia/NSW-SAVID-13324/2022 | N | 1205 | B | 4 | 20220715 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | N | 1205 | P | 4 | 20230605 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | N | 1205 | V | 2 | 20230217 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | N | 1205 | stop | 20 | 20220321 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | N | 1205 | R | 9 | 20220506 |
| EPI_ISL_19485983 | NSP3 | hCoV-19/South Korea/KDCA296018/2024 | N | 1205 | H | 26 | 20240924 |
| EPI_ISL_19545720 | NSP3 | hCoV-19/New Zealand/24YA7295/2024 | N | 1205 | K | 168 | 20241101 |
| EPI_ISL_19161460 | NSP3 | hCoV-19/South Korea/KDCA293093/2024 | N | 1205 | T | 98 | 20240427 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | N | 1205 | C | 2 | 20230413 |
| EPI_ISL_18518733 | NSP3 | hCoV-19/Denmark/DCGC-663298/2023 | N | 1205 | Y | 13 | 20231106 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | N | 1205 | M | 1 | 20230217 |
| EPI_ISL_19074274 | NSP3 | hCoV-19/Japan/FR016-0061/2024 | N | 1205 | I | 34 | 20240309 |
| EPI_ISL_19831363 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56862/2025 | N | 1205 | del | 163 | 20250310 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | N | 1205 | L | 5 | 20221204 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | N | 1205 | A | 5 | 20230217 |
| EPI_ISL_19440872 | NSP3 | hCoV-19/Brazil/RJ-FIOCRUZ-10459/2024 | N | 1205 | S | 275 | 20240906 |
| EPI_ISL_19263799 | NSP3 | hCoV-19/USA/HI-H2329445/2024 | N | 1205 | D | 110 | 20240603 |
| EPI_ISL_19831572 | NSP3 | hCoV-19/Germany/NW-RKI-I-1148055/2025 | S | 1206 | L | 13952 | 20250327 |
| EPI_ISL_19616711 | NSP3 | hCoV-19/USA/CO-CDPHE-42539569/2024 | S | 1206 | P | 234 | 20241203 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | S | 1206 | stop | 5 | 20221201 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | S | 1206 | Q | 4 | 20220305 |
| EPI_ISL_17205479 | NSP3 | hCoV-19/USA/CA-LACPHL-AF19802/2023 | S | 1206 | W | 7 | 20230227 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | S | 1206 | Y | 5 | 20230413 |
| EPI_ISL_19092775 | NSP3 | hCoV-19/South Korea/KDCA291983/2024 | S | 1206 | T | 96 | 20240410 |
| EPI_ISL_5999211 | NSP3 | hCoV-19/Georgia/Tb-s1642/2021 | S | 1206 | E | 9 | 20211023 |
| EPI_ISL_19831363 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56862/2025 | S | 1206 | del | 160 | 20250310 |
| EPI_ISL_19782318 | NSP3 | hCoV-19/USA/NY-NYCPHL-019494/2024 | S | 1206 | F | 1 | 20240801 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | S | 1206 | R | 7 | 20230401 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | S | 1206 | N | 20 | 20220321 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | S | 1206 | G | 1 | 20200606 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | S | 1206 | H | 2 | 20220721 |
| EPI_ISL_19714085 | NSP3 | hCoV-19/Russia/KAM-RII-MH219145S/2024 | S | 1206 | A | 377 | 20241202 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | S | 1206 | K | 3 | 20221204 |
| EPI_ISL_10944005 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8974/2022 | S | 1206 | V | 1 | 20220209 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | S | 1206 | D | 1 | 20220228 |
| EPI_ISL_17622377 | NSP3 | hCoV-19/Italy/LOM-ASST-69359768/2023 | F | 1207 | V | 9 | 20230503 |
| EPI_ISL_19831363 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56862/2025 | F | 1207 | del | 157 | 20250310 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | F | 1207 | H | 2 | 20221204 |
| EPI_ISL_19782165 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10890/2025 | F | 1207 | S | 134 | 20250225 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | F | 1207 | E | 2 | 20230401 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | F | 1207 | R | 1 | 20220104 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | F | 1207 | M | 3 | 20230217 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | F | 1207 | stop | 2 | 20220703 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1207 | G | 2 | 20210318 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | F | 1207 | W | 11 | 20221201 |
| EPI_ISL_10943874 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8940/2022 | F | 1207 | insT | 1 | 20220209 |
| EPI_ISL_19775324 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147870/2025 | F | 1207 | L | 604 | 20250219 |
| EPI_ISL_8882807 | NSP3 | hCoV-19/India/GA-NCCS-VH78098/2021 | F | 1207 | insstopR | 2 | 20210626 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | F | 1207 | I | 27 | 20230413 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | F | 1207 | Y | 10 | 20230217 |
| EPI_ISL_19700851 | NSP3 | hCoV-19/Japan/FR302-1811/2024 | F | 1207 | C | 31 | 20241226 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | F | 1207 | T | 3 | 20220721 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | F | 1207 | N | 1 | 20200606 |
| EPI_ISL_19808438 | NSP3 | hCoV-19/Canada/ON-PHL-202504793/2025 | D | 1208 | G | 1637 | 20250310 |
| EPI_ISL_18652772 | NSP3 | hCoV-19/Georgia/Tb-s8093/2023 | D | 1208 | V | 40 | 20231019 |
| EPI_ISL_19574155 | NSP3 | hCoV-19/USA/WV-CDC-LC1125644/2024 | D | 1208 | B | 25 | 20241114 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | D | 1208 | stop | 6 | 20220210 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | D | 1208 | M | 7 | 20230401 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | D | 1208 | L | 1 | 20230215 |
| EPI_ISL_2201075 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-33767/2020 | D | 1208 | F | 1 | 20201227 |
| EPI_ISL_19831363 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56862/2025 | D | 1208 | del | 188 | 20250310 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | D | 1208 | K | 42 | 20221201 |
| EPI_ISL_19823397 | NSP3 | hCoV-19/Japan/FR021-0289/2025 | D | 1208 | E | 170 | 20250322 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | D | 1208 | T | 2 | 20230217 |
| EPI_ISL_8806479 | NSP3 | hCoV-19/India/GA-NCCS-3055100231628/2021 | D | 1208 | R | 1 | 20210823 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | D | 1208 | Q | 3 | 20221204 |
| EPI_ISL_10951150 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9188/2022 | D | 1208 | C | 2 | 20220210 |
| EPI_ISL_19679593 | NSP3 | hCoV-19/Canada/BC-BCCDC-762999/2025 | D | 1208 | A | 1195 | 20250106 |
| EPI_ISL_19825770 | NSP3 | hCoV-19/Oman/CPHL_7248050/2024 | D | 1208 | Y | 352 | 20241110 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | D | 1208 | I | 7 | 20210807 |
| EPI_ISL_13036500 | NSP3 | hCoV-19/France/OCC-CHU-TLS-2211112544/2022 | D | 1208 | H | 5 | 20220421 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | D | 1208 | insHQIRL | 1 | 20210813 |
| EPI_ISL_16401340 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1125/2022 | D | 1208 | S | 4 | 20221219 |
| EPI_ISL_19705238 | NSP3 | hCoV-19/USA/NM-NMDOH-2024040503/2024 | D | 1208 | N | 1152 | 20241214 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | V | 1209 | H | 5 | 20230217 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | V | 1209 | M | 4 | 20210813 |
| EPI_ISL_18936175 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00150/2023 | V | 1209 | C | 11 | 20230420 |
| EPI_ISL_19831363 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56862/2025 | V | 1209 | del | 185 | 20250310 |
| EPI_ISL_12175574 | NSP3 | hCoV-19/Russia/RYA-CRIE-S_7724080475/2022 | V | 1209 | E | 3 | 20220126 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | V | 1209 | T | 7 | 20230605 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | V | 1209 | S | 6 | 20221018 |
| EPI_ISL_12694384 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471490/2022 | V | 1209 | insRLMY | 1 | 20220126 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | V | 1209 | N | 2 | 20221012 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | V | 1209 | Y | 11 | 20230401 |
| EPI_ISL_17420475 | NSP3 | hCoV-19/USA/CA-CDPH-500105995/2023 | V | 1209 | G | 38 | 20230214 |
| EPI_ISL_19464647 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55254/2024 | V | 1209 | L | 255 | 20240925 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | V | 1209 | F | 20 | 20220321 |
| EPI_ISL_19792569 | NSP3 | hCoV-19/Mauritius/MHW-12570/2025 | V | 1209 | A | 633 | 20250124 |
| EPI_ISL_12291378 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1111/2022 | V | 1209 | K | 1 | 20220124 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1209 | D | 1 | 20201214 |
| EPI_ISL_19715589 | NSP3 | hCoV-19/Italy/FVG-TS-65332147/2025 | V | 1209 | I | 1154 | 20250121 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | L | 1210 | V | 28 | 20230401 |
| EPI_ISL_19738849 | NSP3 | hCoV-19/USA/VA-VCUVAS3-BCVJ302488/2025 | L | 1210 | Q | 62 | 20250131 |
| EPI_ISL_19603158 | NSP3 | hCoV-19/Chile/AR-94543/2024 | L | 1210 | P | 313 | 20241125 |
| EPI_ISL_18279596 | NSP3 | hCoV-19/Mexico/CMX_CIAD-IMSS_01050023-LCE/2023 | L | 1210 | R | 12 | 20230816 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | L | 1210 | F | 4 | 20221012 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | L | 1210 | stop | 10 | 20230401 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | L | 1210 | G | 3 | 20220104 |
| EPI_ISL_10738798 | NSP3 | hCoV-19/Poland/WSSEGorzow-22S1915/2022 | L | 1210 | T | 5 | 20220220 |
| EPI_ISL_9418985 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-8207/2021 | L | 1210 | E | 1 | 20211228 |
| EPI_ISL_18287771 | NSP3 | hCoV-19/France/IDF-AphpSA-882306014826/2023 | L | 1210 | I | 9 | 20230605 |
| EPI_ISL_19831363 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56862/2025 | L | 1210 | del | 279 | 20250310 |
| EPI_ISL_12694384 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471490/2022 | L | 1210 | W | 1 | 20220126 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | L | 1210 | K | 2 | 20230215 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | L | 1210 | Y | 4 | 20230217 |
| EPI_ISL_19618915 | NSP3 | hCoV-19/Ireland/LK-UHL-694345/2024 | L | 1210 | M | 135 | 20241203 |
| EPI_ISL_10944005 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8974/2022 | K | 1211 | G | 1 | 20220209 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1211 | C | 1 | 20220210 |
| EPI_ISL_11178802 | NSP3 | hCoV-19/Indonesia/KT-NIHRD-WGS-22-01620/2022 | K | 1211 | H | 3 | 20220124 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | K | 1211 | V | 2 | 20220110 |
| EPI_ISL_19736729 | NSP3 | hCoV-19/USA/VA-VCUVAS3-WNJK465785/2025 | K | 1211 | M | 67 | 20250202 |
| EPI_ISL_19785018 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13867/2024 | K | 1211 | E | 336 | 20241210 |
| EPI_ISL_19645465 | NSP3 | hCoV-19/Japan/FR012-0720/2024 | K | 1211 | R | 547 | 20241220 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | K | 1211 | del | 265 | 20241021 |
| EPI_ISL_17372613 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2642/2022 | K | 1211 | P | 12 | 20221231 |
| EPI_ISL_19771746 | NSP3 | hCoV-19/USA/NY-Wadsworth-25008009-01/2025 | K | 1211 | T | 156 | 20250116 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | K | 1211 | F | 2 | 20230413 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | K | 1211 | Y | 3 | 20230215 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | K | 1211 | L | 2 | 20221204 |
| EPI_ISL_9418985 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-8207/2021 | K | 1211 | D | 1 | 20211228 |
| EPI_ISL_19804313 | NSP3 | hCoV-19/USA/NY-Wadsworth-25020776-01/2025 | K | 1211 | Q | 122 | 20250304 |
| EPI_ISL_12291383 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1117/2022 | K | 1211 | I | 2 | 20220125 |
| EPI_ISL_19777578 | NSP3 | hCoV-19/USA/NE-RP251811/2025 | K | 1211 | N | 7322 | 20250226 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | K | 1211 | S | 10 | 20230401 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | K | 1211 | stop | 23 | 20220321 |
| EPI_ISL_8806479 | NSP3 | hCoV-19/India/GA-NCCS-3055100231628/2021 | S | 1212 | E | 2 | 20210823 |
| EPI_ISL_19785331 | NSP3 | hCoV-19/Japan/FR012-0072/2025 | S | 1212 | P | 1236 | 20250306 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | S | 1212 | M | 2 | 20221204 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | S | 1212 | C | 18 | 20220321 |
| EPI_ISL_19651301 | NSP3 | hCoV-19/Netherlands/GE-RIVM-144640/2024 | S | 1212 | Y | 59 | 20241210 |
| EPI_ISL_18107075 | NSP3 | hCoV-19/Luxembourg/LNS1889399/2023 | S | 1212 | K | 3 | 20230627 |
| EPI_ISL_17731555 | NSP3 | hCoV-19/Sweden/O-14_SE300_DC23-005258/2023 | S | 1212 | N | 7 | 20230526 |
| EPI_ISL_13648104 | NSP3 | hCoV-19/Spain/AS-252237734/2022 | S | 1212 | stop | 4 | 20220623 |
| EPI_ISL_19819693 | NSP3 | hCoV-19/Singapore/Y25R14MSC109/2025 | S | 1212 | L | 12108 | 20250327 |
| EPI_ISL_17591988 | NSP3 | hCoV-19/Nepal/NPHL-S-2441/2023 | S | 1212 | V | 7 | 20230322 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | S | 1212 | H | 3 | 20221018 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | S | 1212 | I | 2 | 20210801 |
| EPI_ISL_19440085 | NSP3 | hCoV-19/Hubei/HCDC-HG7150/2024 | S | 1212 | T | 32 | 20240820 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | S | 1212 | Q | 9 | 20230401 |
| EPI_ISL_18255148 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-08/2023 | S | 1212 | F | 5 | 20230316 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | S | 1212 | R | 3 | 20230217 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | S | 1212 | G | 3 | 20230413 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | S | 1212 | A | 291 | 20241001 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | S | 1212 | del | 292 | 20241021 |
| EPI_ISL_19792790 | NSP3 | hCoV-19/USA/NY-PRL-250318_83H06/2025 | E | 1213 | K | 1081 | 20250310 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | E | 1213 | N | 1 | 20220110 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | E | 1213 | F | 2 | 20201214 |
| EPI_ISL_13408159 | NSP3 | hCoV-19/Spain/AS-252226042/2022 | E | 1213 | W | 1 | 20220604 |
| EPI_ISL_19693152 | NSP3 | hCoV-19/USA/NJ-DHSS-836/2025 | E | 1213 | A | 249 | 20250104 |
| EPI_ISL_19405233 | NSP3 | hCoV-19/USA/HI-H2330726/2024 | E | 1213 | V | 78 | 20240730 |
| EPI_ISL_17731555 | NSP3 | hCoV-19/Sweden/O-14_SE300_DC23-005258/2023 | E | 1213 | Q | 14 | 20230526 |
| EPI_ISL_19756723 | NSP3 | hCoV-19/Australia/QLD0x01525B/2025 | E | 1213 | D | 1373 | 20250207 |
| EPI_ISL_18936246 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00137/2023 | E | 1213 | L | 8 | 20230419 |
| EPI_ISL_19784264 | NSP3 | hCoV-19/USA/NJ-GBW-GKISBBBE97816/2025 | E | 1213 | G | 300 | 20250306 |
| EPI_ISL_17370582 | NSP3 | hCoV-19/Thailand/NIC_NMA_1012/2023 | E | 1213 | T | 22 | 20230310 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | E | 1213 | stop | 2 | 20210520 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | E | 1213 | S | 1 | 20210809 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | E | 1213 | R | 14 | 20230401 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | E | 1213 | M | 2 | 20230413 |
| EPI_ISL_11307449 | NSP3 | hCoV-19/England/BRBR-3AF0000/2022 | E | 1213 | Z | 2 | 20220315 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | E | 1213 | Y | 5 | 20221204 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | E | 1213 | P | 4 | 20230401 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | E | 1213 | H | 1 | 20210326 |
| EPI_ISL_19651301 | NSP3 | hCoV-19/Netherlands/GE-RIVM-144640/2024 | E | 1213 | del | 433 | 20241210 |
| EPI_ISL_8806479 | NSP3 | hCoV-19/India/GA-NCCS-3055100231628/2021 | D | 1214 | R | 3 | 20210823 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | D | 1214 | F | 1 | 20220703 |
| EPI_ISL_16833196 | NSP3 | hCoV-19/Brazil/RS-LACEN-431819569/2023 | D | 1214 | insAHRA | 1 | 20230104 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | D | 1214 | C | 1 | 20220110 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | D | 1214 | T | 14 | 20230401 |
| EPI_ISL_11862069 | NSP3 | hCoV-19/Israel/ICH-741210339/2022 | D | 1214 | insXX | 1 | 20220318 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | D | 1214 | L | 1 | 20230413 |
| EPI_ISL_19055157 | NSP3 | hCoV-19/Japan/FR050-0042/2024 | D | 1214 | B | 23 | 20240323 |
| EPI_ISL_19651301 | NSP3 | hCoV-19/Netherlands/GE-RIVM-144640/2024 | D | 1214 | del | 430 | 20241210 |
| EPI_ISL_9588096 | NSP3 | hCoV-19/England/PHEC-4X03FZA3/2021 | D | 1214 | K | 2 | 20211219 |
| EPI_ISL_18817835 | NSP3 | hCoV-19/USA/CA-HLX-STM-W7CN3VSHR/2023 | D | 1214 | A | 26 | 20231220 |
| EPI_ISL_19545513 | NSP3 | hCoV-19/Gansu/BYCDC149/2024 | D | 1214 | Y | 226 | 20241109 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | D | 1214 | Q | 1 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1214 | W | 1 | 20210318 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | D | 1214 | stop | 2 | 20221204 |
| EPI_ISL_8804048 | NSP3 | hCoV-19/India/GA-NCCS-3055100215281/2021 | D | 1214 | I | 2 | 20210721 |
| EPI_ISL_18936246 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00137/2023 | D | 1214 | P | 6 | 20230419 |
| EPI_ISL_19042755 | NSP3 | hCoV-19/Chile/NB-ISP-17327/2024 | D | 1214 | V | 11 | 20240227 |
| EPI_ISL_17766176 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-WGS-22-0333-MI/2023 | D | 1214 | H | 16 | 20230525 |
| EPI_ISL_19642360 | NSP3 | hCoV-19/USA/CA-PFZ01565/2024 | D | 1214 | E | 102 | 20240906 |
| EPI_ISL_19733125 | NSP3 | hCoV-19/Canada/AB-ABPHL-131129/2025 | D | 1214 | N | 1222 | 20250130 |
| EPI_ISL_4659879 | NSP3 | hCoV-19/USA/MD-MDH-4729/2021 | D | 1214 | S | 2 | 20210913 |
| EPI_ISL_19825376 | NSP3 | hCoV-19/USA/NM-NMDOH-2025007408/2025 | D | 1214 | G | 358 | 20250223 |
| EPI_ISL_19194388 | NSP3 | hCoV-19/Anhui/AQCDC-066/2024 | A | 1215 | E | 270 | 20240324 |
| EPI_ISL_8804048 | NSP3 | hCoV-19/India/GA-NCCS-3055100215281/2021 | A | 1215 | stop | 1 | 20210721 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | A | 1215 | I | 5 | 20230401 |
| EPI_ISL_17713337 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200469791N2/2022 | A | 1215 | insXXXX | 2 | 20220929 |
| EPI_ISL_19825992 | NSP3 | hCoV-19/Singapore/Y25R15MSC54/2025 | A | 1215 | V | 3685 | 20250407 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | A | 1215 | del | 376 | 20241021 |
| EPI_ISL_9588096 | NSP3 | hCoV-19/England/PHEC-4X03FZA3/2021 | A | 1215 | H | 1 | 20211219 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | A | 1215 | Y | 1 | 20220305 |
| EPI_ISL_10943874 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8940/2022 | A | 1215 | insYTTTIKPVTYKL | 1 | 20220209 |
| EPI_ISL_2784230 | NSP3 | hCoV-19/USA/CA-Curative-065061/2021 | A | 1215 | M | 10 | 20210614 |
| EPI_ISL_10944005 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8974/2022 | A | 1215 | insL | 1 | 20220209 |
| EPI_ISL_19192473 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16051/2024 | A | 1215 | R | 18 | 20240403 |
| EPI_ISL_19806740 | NSP3 | hCoV-19/Spain/CL-UCHV-50002/2025 | A | 1215 | T | 3027 | 20250315 |
| EPI_ISL_10944005 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8974/2022 | A | 1215 | Q | 2 | 20220209 |
| EPI_ISL_17514539 | NSP3 | hCoV-19/Sweden/03_SE600_500000289501SP/2022 | A | 1215 | insXXXXX | 1 | 20221124 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | A | 1215 | F | 2 | 20230217 |
| EPI_ISL_17248247 | NSP3 | hCoV-19/Sweden/03_SE600_500000239317SP/2023 | A | 1215 | insXX | 19 | 20230204 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1215 | L | 4 | 20220210 |
| EPI_ISL_19684171 | NSP3 | hCoV-19/USA/CO-CDPHE-42779131/2024 | A | 1215 | P | 10 | 20241231 |
| EPI_ISL_19641744 | NSP3 | hCoV-19/USA/CA-PFZ00785/2024 | A | 1215 | S | 793 | 20240905 |
| EPI_ISL_17713656 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200490686N2/2022 | A | 1215 | insXXX | 4 | 20221114 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | A | 1215 | G | 4 | 20230215 |
| EPI_ISL_13466569 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS_22_05012/2022 | A | 1215 | K | 2 | 20220614 |
| EPI_ISL_11950041 | NSP3 | hCoV-19/England/DHSC-CYY98A7/2022 | A | 1215 | insDR | 2 | 20220218 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | Q | 1216 | M | 1 | 20230413 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | Q | 1216 | G | 1 | 20210805 |
| EPI_ISL_2662466 | NSP3 | hCoV-19/Italy/SAR-Cagliari312/2021 | Q | 1216 | F | 1 | 20210616 |
| EPI_ISL_19781980 | NSP3 | hCoV-19/USA/IL-RIPHL_123935_G/2025 | Q | 1216 | R | 1627 | 20250224 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | Q | 1216 | T | 4 | 20230215 |
| EPI_ISL_11931695 | NSP3 | hCoV-19/England/DHSC-CYBQHEM/2022 | Q | 1216 | insRX | 6 | 20220210 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | Q | 1216 | insA | 1 | 20210813 |
| EPI_ISL_11931695 | NSP3 | hCoV-19/England/DHSC-CYBQHEM/2022 | Q | 1216 | D | 7 | 20220210 |
| EPI_ISL_19270989 | NSP3 | hCoV-19/Colombia/SAN-INS-VG-31709/2024 | Q | 1216 | P | 25 | 20240216 |
| EPI_ISL_19637113 | NSP3 | hCoV-19/USA/NE-L384220746/2024 | Q | 1216 | K | 131 | 20241215 |
| EPI_ISL_12215599 | NSP3 | hCoV-19/France/IDF-AphpSA-KC000608/2021 | Q | 1216 | S | 1 | 20211227 |
| EPI_ISL_13307087 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3904/2022 | Q | 1216 | E | 14 | 20220501 |
| EPI_ISL_19744509 | NSP3 | hCoV-19/Austria/AGES-1100060/2025 | Q | 1216 | L | 467 | 20250122 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | Q | 1216 | stop | 9 | 20221018 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | Q | 1216 | Y | 1 | 20210118 |
| EPI_ISL_19192473 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16051/2024 | Q | 1216 | A | 14 | 20240403 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1216 | C | 1 | 20220210 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | Q | 1216 | del | 376 | 20241021 |
| EPI_ISL_13726073 | NSP3 | hCoV-19/Chile/MA-71058/2022 | Q | 1216 | N | 7 | 20220601 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | Q | 1216 | V | 1 | 20220110 |
| EPI_ISL_19819697 | NSP3 | hCoV-19/Singapore/Y25R14MSC41/2025 | Q | 1216 | H | 3939 | 20250328 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | G | 1217 | Y | 6 | 20230123 |
| EPI_ISL_11723746 | NSP3 | hCoV-19/Japan/PG-212682/2022 | G | 1217 | P | 2 | 20220225 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | G | 1217 | stop | 7 | 20220703 |
| EPI_ISL_19785481 | NSP3 | hCoV-19/Japan/FR302-0270/2025 | G | 1217 | R | 2252 | 20250225 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | G | 1217 | del | 371 | 20241021 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | G | 1217 | K | 5 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1217 | T | 1 | 20210318 |
| EPI_ISL_15650196 | NSP3 | hCoV-19/Morocco/FMP522/2022 | G | 1217 | S | 10 | 20220606 |
| EPI_ISL_19799842 | NSP3 | hCoV-19/USA/TX-HMH-M-147197/2024 | G | 1217 | E | 541 | 20241227 |
| EPI_ISL_17372613 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2642/2022 | G | 1217 | F | 2 | 20221231 |
| EPI_ISL_12291391 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1125/2022 | G | 1217 | A | 6 | 20220123 |
| EPI_ISL_4659879 | NSP3 | hCoV-19/USA/MD-MDH-4729/2021 | G | 1217 | W | 1 | 20210913 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | G | 1217 | I | 6 | 20230215 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | G | 1217 | N | 2 | 20221018 |
| EPI_ISL_10944005 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8974/2022 | G | 1217 | H | 2 | 20220209 |
| EPI_ISL_19770383 | NSP3 | hCoV-19/Spain/AS-HUCA-232517296/2025 | G | 1217 | V | 122 | 20250227 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | G | 1217 | Q | 1 | 20230413 |
| EPI_ISL_14488458 | NSP3 | hCoV-19/USA/ID-IBL-843615/2022 | M | 1218 | S | 2 | 20220805 |
| EPI_ISL_12934302 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010622-1522/2022 | M | 1218 | insILP | 1 | 20220106 |
| EPI_ISL_19722677 | NSP3 | hCoV-19/Spain/IB-HUSE-9711/2024 | M | 1218 | T | 363 | 20241212 |
| EPI_ISL_19663666 | NSP3 | hCoV-19/Canada/ON-PHL-202500250/2025 | M | 1218 | V | 1361 | 20250102 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | M | 1218 | H | 2 | 20210318 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | M | 1218 | del | 391 | 20241021 |
| EPI_ISL_19804876 | NSP3 | hCoV-19/USA/NY-USAFSAM-S23494/2025 | M | 1218 | L | 141 | 20250228 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | M | 1218 | C | 1 | 20221012 |
| EPI_ISL_10944005 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8974/2022 | M | 1218 | Q | 1 | 20220209 |
| EPI_ISL_8882805 | NSP3 | hCoV-19/India/GA-NCCS-VH78087/2021 | M | 1218 | insAG | 11 | 20210626 |
| EPI_ISL_8045505 | NSP3 | hCoV-19/England/PHEC-3V0BAVF5/2021 | M | 1218 | A | 2 | 20211211 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | M | 1218 | W | 11 | 20230401 |
| EPI_ISL_19039856 | NSP3 | hCoV-19/Japan/PG-592694/2024 | M | 1218 | R | 41 | 20240111 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | M | 1218 | insW | 1 | 20210520 |
| EPI_ISL_12934153 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090921-1410/2021 | M | 1218 | insAGN | 1 | 20210909 |
| EPI_ISL_8329841 | NSP3 | hCoV-19/Pakistan/DUHS22/2021 | M | 1218 | stop | 2 | 20211225 |
| EPI_ISL_8812990 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-111221-1251/2021 | M | 1218 | F | 5 | 20211112 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | M | 1218 | P | 1 | 20210701 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | M | 1218 | G | 3 | 20230217 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | M | 1218 | Y | 1 | 20220623 |
| EPI_ISL_18621817 | NSP3 | hCoV-19/USA/NY-CDC-QDX88183250/2023 | M | 1218 | K | 89 | 20231128 |
| EPI_ISL_14488427 | NSP3 | hCoV-19/USA/ID-IBL-842153/2022 | M | 1218 | N | 3 | 20220802 |
| EPI_ISL_12916247 | NSP3 | hCoV-19/USA/un-7c30fe7d39f6f26/2021 | M | 1218 | E | 1 | 20210430 |
| EPI_ISL_19805607 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U669-1/2025 | M | 1218 | I | 2685 | 20250221 |
| EPI_ISL_12934297 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1517/2021 | D | 1219 | T | 3 | 20211231 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | D | 1219 | K | 4 | 20221018 |
| EPI_ISL_19095672 | NSP3 | hCoV-19/Singapore/R21MQ76/2024 | D | 1219 | B | 15 | 20240415 |
| EPI_ISL_18468740 | NSP3 | hCoV-19/Bulgaria/2252/2022 | D | 1219 | L | 1 | 20221205 |
| EPI_ISL_10064217 | NSP3 | hCoV-19/USA/LA-OD-8289764469/2022 | D | 1219 | M | 1 | 20220207 |
| EPI_ISL_19795873 | NSP3 | hCoV-19/New Zealand/25YA0740/2025 | D | 1219 | del | 500 | 20250315 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | D | 1219 | Q | 1 | 20210816 |
| EPI_ISL_15228272 | NSP3 | hCoV-19/USA/RI-ASC-210837946/2022 | D | 1219 | insSPQ | 1 | 20220420 |
| EPI_ISL_19193716 | NSP3 | hCoV-19/Ukraine/86026/2024 | D | 1219 | A | 99 | 20240520 |
| EPI_ISL_19618585 | NSP3 | hCoV-19/Germany/BY-LGL-6432766/2024 | D | 1219 | G | 526 | 20241127 |
| EPI_ISL_18624116 | NSP3 | hCoV-19/USA/IA-SHL-2371617/2023 | D | 1219 | E | 195 | 20231204 |
| EPI_ISL_10064217 | NSP3 | hCoV-19/USA/LA-OD-8289764469/2022 | D | 1219 | insstopLstopAL | 1 | 20220207 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | D | 1219 | V | 16 | 20230217 |
| EPI_ISL_1314265 | NSP3 | hCoV-19/USA/MI-UM-10037594993/2020 | D | 1219 | insMRVS | 1 | 20201229 |
| EPI_ISL_19586817 | NSP3 | hCoV-19/Panama/NAMRU-FMP0593/2024 | D | 1219 | H | 10 | 20240708 |
| EPI_ISL_19362124 | NSP3 | hCoV-19/USA/MD-CDC-LC1115604/2024 | D | 1219 | Y | 360 | 20240812 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | D | 1219 | R | 4 | 20221204 |
| EPI_ISL_18936147 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00080/2023 | D | 1219 | I | 13 | 20230413 |
| EPI_ISL_17372613 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2642/2022 | D | 1219 | C | 1 | 20221231 |
| EPI_ISL_19710581 | NSP3 | hCoV-19/Canada/ON-KHS-06069-v1/2024 | D | 1219 | N | 610 | 20241220 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | D | 1219 | stop | 3 | 20210805 |
| EPI_ISL_10177537 | NSP3 | hCoV-19/deer/Canada/ON-WTD-wcov-04662-2575/2021 | D | 1219 | insMRAS | 20 | 20211201 |
| EPI_ISL_12544527 | NSP3 | hCoV-19/Indonesia/LA-NIHRD-WGS.22.04370/2022 | D | 1219 | S | 6 | 20220403 |
| EPI_ISL_11432374 | NSP3 | hCoV-19/England/BRBR-3B908DC/2022 | D | 1219 | insL | 13 | 20220320 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | N | 1220 | stop | 4 | 20220210 |
| EPI_ISL_10287296 | NSP3 | hCoV-19/England/MILK-375F433/2022 | N | 1220 | H | 2 | 20220217 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | N | 1220 | G | 18 | 20220205 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | N | 1220 | A | 2 | 20230215 |
| EPI_ISL_19363537 | NSP3 | hCoV-19/Japan/FR062-0431/2024 | N | 1220 | B | 5 | 20240820 |
| EPI_ISL_19716246 | NSP3 | hCoV-19/USA/AZ-CDC-LC1129520/2025 | N | 1220 | I | 34 | 20250106 |
| EPI_ISL_17527164 | NSP3 | hCoV-19/Sweden/03_SE600_000200513019N2/2022 | N | 1220 | R | 8 | 20221229 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | N | 1220 | Q | 3 | 20230217 |
| EPI_ISL_16998954 | NSP3 | hCoV-19/USA/MN-MDH-34220/2023 | N | 1220 | Y | 15 | 20230214 |
| EPI_ISL_19795873 | NSP3 | hCoV-19/New Zealand/25YA0740/2025 | N | 1220 | del | 542 | 20250315 |
| EPI_ISL_19727656 | NSP3 | hCoV-19/USA/IL-RIPHL_15268_G/2025 | N | 1220 | D | 225 | 20250129 |
| EPI_ISL_10943874 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8940/2022 | N | 1220 | C | 1 | 20220209 |
| EPI_ISL_3191674 | NSP3 | hCoV-19/Japan/PG-69253/2021 | N | 1220 | insTLKNTVCTVCG | 1 | 20210127 |
| EPI_ISL_19787834 | NSP3 | hCoV-19/USA/SD-CDC-2-8272125/2025 | N | 1220 | T | 71 | 20250128 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | N | 1220 | L | 6 | 20220210 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | N | 1220 | F | 1 | 20221018 |
| EPI_ISL_19659612 | NSP3 | hCoV-19/Ireland/D-CS240427/2024 | N | 1220 | K | 252 | 20241111 |
| EPI_ISL_19804750 | NSP3 | hCoV-19/USA/NY-NYULH-22442/2025 | N | 1220 | S | 370 | 20250320 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | N | 1220 | V | 11 | 20230401 |
| EPI_ISL_17372609 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2639/2022 | N | 1220 | insEWI | 1 | 20221204 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | N | 1220 | E | 1 | 20201214 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | L | 1221 | C | 1 | 20210805 |
| EPI_ISL_19681352 | NSP3 | hCoV-19/Germany/ST-RKI-I-1147226/2024 | L | 1221 | V | 43 | 20241231 |
| EPI_ISL_7566383 | NSP3 | hCoV-19/Botswana/R50B55_BHP_AAC29730/2021 | L | 1221 | Q | 3 | 20211201 |
| EPI_ISL_19095945 | NSP3 | hCoV-19/Singapore/R22MQ122/2024 | L | 1221 | J | 6 | 20240422 |
| EPI_ISL_14488458 | NSP3 | hCoV-19/USA/ID-IBL-843615/2022 | L | 1221 | K | 2 | 20220805 |
| EPI_ISL_19469175 | NSP3 | hCoV-19/Italy/VEN-IZSVe-24RS8039-1_PD/2024 | L | 1221 | R | 148 | 20240911 |
| EPI_ISL_19765153 | NSP3 | hCoV-19/USA/NY-PRL-250225_81B07/2025 | L | 1221 | P | 155 | 20250214 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | L | 1221 | A | 2 | 20220321 |
| EPI_ISL_19795873 | NSP3 | hCoV-19/New Zealand/25YA0740/2025 | L | 1221 | del | 489 | 20250315 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1221 | N | 6 | 20220210 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1221 | Y | 1 | 20201214 |
| EPI_ISL_19788243 | NSP3 | hCoV-19/Brazil/SP-FIOCRUZ-350/2025 | L | 1221 | I | 125 | 20250205 |
| EPI_ISL_8806479 | NSP3 | hCoV-19/India/GA-NCCS-3055100231628/2021 | L | 1221 | stop | 12 | 20210823 |
| EPI_ISL_19334603 | NSP3 | hCoV-19/Egypt/CPHL-EGY24159/2024 | L | 1221 | H | 26 | 20240625 |
| EPI_ISL_11507468 | NSP3 | hCoV-19/Turkey/HSGM-G7650/2022 | L | 1221 | S | 3 | 20220311 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | L | 1221 | T | 2 | 20210816 |
| EPI_ISL_19802312 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10940/2025 | L | 1221 | F | 3855 | 20250312 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | A | 1222 | H | 1 | 20210813 |
| EPI_ISL_18493645 | NSP3 | hCoV-19/Brazil/MG-FUNED-311628718/2023 | A | 1222 | S | 57 | 20230921 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | A | 1222 | K | 8 | 20221012 |
| EPI_ISL_14488458 | NSP3 | hCoV-19/USA/ID-IBL-843615/2022 | A | 1222 | R | 3 | 20220805 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | A | 1222 | stop | 10 | 20221018 |
| EPI_ISL_19312512 | NSP3 | hCoV-19/Sweden/W-50190969LX/2024 | A | 1222 | D | 55 | 20240706 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | A | 1222 | I | 1 | 20230315 |
| EPI_ISL_19795873 | NSP3 | hCoV-19/New Zealand/25YA0740/2025 | A | 1222 | del | 397 | 20250315 |
| EPI_ISL_18936163 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00114/2023 | A | 1222 | P | 27 | 20230417 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | A | 1222 | L | 18 | 20230624 |
| EPI_ISL_18575140 | NSP3 | hCoV-19/Italy/SIC-AOUME-UOSD-GCL-5055/2022 | A | 1222 | G | 12 | 20220906 |
| EPI_ISL_13629096 | NSP3 | hCoV-19/Latvia/2204060466/2022 | A | 1222 | N | 2 | 20220420 |
| EPI_ISL_19710346 | NSP3 | hCoV-19/Netherlands/UT-RIVM-144959/2024 | A | 1222 | V | 1607 | 20241229 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | A | 1222 | E | 1 | 20230401 |
| EPI_ISL_13147913 | NSP3 | hCoV-19/Paraguay/431101/2022 | A | 1222 | Y | 2 | 20220302 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | A | 1222 | insF | 1 | 20221012 |
| EPI_ISL_19780000 | NSP3 | hCoV-19/USA/NY-SUNYQB-X1055395/2025 | A | 1222 | T | 254 | 20250301 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | A | 1222 | C | 4 | 20220210 |
| EPI_ISL_19601843 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-50476/2024 | C | 1223 | R | 286 | 20241030 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | C | 1223 | L | 4 | 20240105 |
| EPI_ISL_11954885 | NSP3 | hCoV-19/England/DHSC-CYYSG3Q/2022 | C | 1223 | V | 1 | 20220124 |
| EPI_ISL_19795873 | NSP3 | hCoV-19/New Zealand/25YA0740/2025 | C | 1223 | del | 399 | 20250315 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | C | 1223 | I | 1 | 20210806 |
| EPI_ISL_8806479 | NSP3 | hCoV-19/India/GA-NCCS-3055100231628/2021 | C | 1223 | insL | 9 | 20210823 |
| EPI_ISL_19638627 | NSP3 | hCoV-19/Canada/ON-PHL-202425502/2024 | C | 1223 | F | 103 | 20241217 |
| EPI_ISL_19683404 | NSP3 | hCoV-19/Canada/AB-ABPHL-130244/2025 | C | 1223 | Y | 970 | 20250102 |
| EPI_ISL_14488458 | NSP3 | hCoV-19/USA/ID-IBL-843615/2022 | C | 1223 | T | 4 | 20220805 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | C | 1223 | Q | 1 | 20210805 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | C | 1223 | K | 1 | 20201214 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | C | 1223 | N | 6 | 20220321 |
| EPI_ISL_17735477 | NSP3 | hCoV-19/Thailand/NIC_SNI_4316/2023 | C | 1223 | stop | 11 | 20230402 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | C | 1223 | W | 3 | 20220117 |
| EPI_ISL_12145034 | NSP3 | hCoV-19/Turkey/HSGM-G8419/2022 | C | 1223 | H | 2 | 20220312 |
| EPI_ISL_19617802 | NSP3 | hCoV-19/USA/WI-WSLH-2402949/2024 | C | 1223 | S | 344 | 20241018 |
| EPI_ISL_18936163 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00114/2023 | C | 1223 | A | 17 | 20230417 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1223 | M | 1 | 20210318 |
| EPI_ISL_19813455 | NSP3 | hCoV-19/France/PAC-RELAB-HCL725000040001/2025 | C | 1223 | G | 47 | 20250321 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | E | 1224 | W | 1 | 20210813 |
| EPI_ISL_19718681 | NSP3 | hCoV-19/USA/CO-CDPHE-42909571/2025 | E | 1224 | K | 1132 | 20250129 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | E | 1224 | T | 23 | 20230624 |
| EPI_ISL_18845521 | NSP3 | hCoV-19/Russia/SPE-RII-8978S/2023 | E | 1224 | stop | 325 | 20231226 |
| EPI_ISL_19795873 | NSP3 | hCoV-19/New Zealand/25YA0740/2025 | E | 1224 | del | 387 | 20250315 |
| EPI_ISL_12573676 | NSP3 | hCoV-19/USA/ID-IBL-816443/2022 | E | 1224 | P | 1 | 20220427 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | E | 1224 | Y | 2 | 20230217 |
| EPI_ISL_17689512 | NSP3 | hCoV-19/USA/NY-NYULH-14765/2023 | E | 1224 | V | 52 | 20230510 |
| EPI_ISL_18269041 | NSP3 | hCoV-19/USA/MS-MSPHL-0570/2023 | E | 1224 | S | 7 | 20230815 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | E | 1224 | H | 2 | 20220506 |
| EPI_ISL_4163423 | NSP3 | hCoV-19/USA/ID-CDC-LC0210527/2021 | E | 1224 | insNQRR | 1 | 20210820 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | E | 1224 | R | 8 | 20240105 |
| EPI_ISL_19681249 | NSP3 | hCoV-19/Germany/BY-RKI-I-1147117/2024 | E | 1224 | A | 1966 | 20241218 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | E | 1224 | L | 2 | 20210801 |
| EPI_ISL_19712543 | NSP3 | hCoV-19/Canada/ON-KHS-00007-v2/2024 | E | 1224 | G | 228 | 20241230 |
| EPI_ISL_19418296 | NSP3 | hCoV-19/France/OCC-RELAB-HCL724000431401/2024 | E | 1224 | D | 313 | 20240822 |
| EPI_ISL_17200881 | NSP3 | hCoV-19/England/PLYM-326F9029/2023 | E | 1224 | Z | 6 | 20230307 |
| EPI_ISL_18633857 | NSP3 | hCoV-19/USA/UT-CDC-2-7374671/2023 | E | 1224 | Q | 28 | 20231005 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | D | 1225 | C | 8 | 20230217 |
| EPI_ISL_19802498 | NSP3 | hCoV-19/USA/CO-CDPHE-43205557/2025 | D | 1225 | G | 1253 | 20250307 |
| EPI_ISL_19805430 | NSP3 | hCoV-19/USA/NY-URMC-P3S1U510-1/2025 | D | 1225 | Y | 261 | 20250108 |
| EPI_ISL_14488458 | NSP3 | hCoV-19/USA/ID-IBL-843615/2022 | D | 1225 | K | 4 | 20220805 |
| EPI_ISL_17219103 | NSP3 | hCoV-19/England/PHEC-YYEJWK6/2023 | D | 1225 | B | 25 | 20230302 |
| EPI_ISL_19550449 | NSP3 | hCoV-19/Sichuan/PZHCDC-45/2024 | D | 1225 | A | 121 | 20240826 |
| EPI_ISL_18285525 | NSP3 | hCoV-19/Denmark/DCGC-659378/2023 | D | 1225 | S | 11 | 20230821 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | D | 1225 | del | 398 | 20241021 |
| EPI_ISL_19161966 | NSP3 | hCoV-19/Wales/CLIMB-CM7YJWGA/2024 | D | 1225 | E | 268 | 20240510 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | D | 1225 | I | 15 | 20230401 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | D | 1225 | F | 17 | 20230624 |
| EPI_ISL_19821892 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136251/2025 | D | 1225 | N | 1248 | 20250326 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | D | 1225 | R | 10 | 20240105 |
| EPI_ISL_15062475 | NSP3 | hCoV-19/Reunion/ChuReu-722090757501/2022 | D | 1225 | V | 15 | 20220905 |
| EPI_ISL_19414396 | NSP3 | hCoV-19/USA/DE-DHSS-328/2024 | D | 1225 | H | 11 | 20240819 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | D | 1225 | T | 1 | 20210326 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | L | 1226 | F | 1 | 20220117 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | L | 1226 | S | 12 | 20240105 |
| EPI_ISL_19795873 | NSP3 | hCoV-19/New Zealand/25YA0740/2025 | L | 1226 | I | 123 | 20250315 |
| EPI_ISL_14289721 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-12246/2022 | L | 1226 | R | 4 | 20220722 |
| EPI_ISL_18946515 | NSP3 | hCoV-19/USA/NY-URMC-O1S1M964-1/2024 | L | 1226 | V | 30 | 20240116 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | L | 1226 | stop | 12 | 20230401 |
| EPI_ISL_14488458 | NSP3 | hCoV-19/USA/ID-IBL-843615/2022 | L | 1226 | Y | 3 | 20220805 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | L | 1226 | insNQLTGYK | 1 | 20221012 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | L | 1226 | G | 4 | 20230217 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | L | 1226 | A | 8 | 20220131 |
| EPI_ISL_19827928 | NSP3 | hCoV-19/USA/CA-CDPH-500146092/2025 | L | 1226 | P | 520 | 20250130 |
| EPI_ISL_15831943 | NSP3 | hCoV-19/Singapore/14823/2022 | L | 1226 | insN | 1 | 20221111 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | L | 1226 | insILPA | 1 | 20210816 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | L | 1226 | insI | 1 | 20210915 |
| EPI_ISL_19624248 | NSP3 | hCoV-19/env/Germany/BY-LGL-6439447/2024 | L | 1226 | Q | 190 | 20241204 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | L | 1226 | del | 300 | 20241021 |
| EPI_ISL_17588140 | NSP3 | hCoV-19/USA/TX-HMH-M-128396/2023 | L | 1226 | H | 2 | 20230414 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | L | 1226 | T | 1 | 20210813 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | L | 1226 | insANYA | 1 | 20210326 |
| EPI_ISL_9602414 | NSP3 | hCoV-19/England/MILK-34E1A0A/2022 | L | 1226 | J | 13 | 20220131 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | K | 1227 | S | 19 | 20230624 |
| EPI_ISL_19826642 | NSP3 | hCoV-19/USA/NY-PRL-250408_83C12/2025 | K | 1227 | E | 228 | 20250330 |
| EPI_ISL_19313714 | NSP3 | hCoV-19/Italy/FVG-GO-65330291/2024 | K | 1227 | Q | 127 | 20240718 |
| EPI_ISL_8812973 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082021-1193/2021 | K | 1227 | insW | 1 | 20210820 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | K | 1227 | P | 2 | 20220117 |
| EPI_ISL_18278645 | NSP3 | hCoV-19/Canada/AB-ABPHL-101776/2023 | K | 1227 | N | 46 | 20230905 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | K | 1227 | del | 249 | 20241021 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | K | 1227 | A | 2 | 20220506 |
| EPI_ISL_19715523 | NSP3 | hCoV-19/USA/NY-PRL-250204_82F09/2025 | K | 1227 | T | 39 | 20250127 |
| EPI_ISL_17788076 | NSP3 | hCoV-19/env/Germany/BY-LGL-5844202/2023 | K | 1227 | L | 7 | 20230403 |
| EPI_ISL_13371636 | NSP3 | hCoV-19/Mexico/OAX-INMEGEN-75-196/2022 | K | 1227 | insWMVLFV | 1 | 20220607 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1227 | V | 1 | 20220210 |
| EPI_ISL_19181668 | NSP3 | hCoV-19/Singapore/R30MQ65/2024 | K | 1227 | I | 27 | 20240520 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | K | 1227 | D | 3 | 20230215 |
| EPI_ISL_12197067 | NSP3 | hCoV-19/Germany/HE-RKI-I-727466/2022 | K | 1227 | insN | 1 | 20220408 |
| EPI_ISL_12573676 | NSP3 | hCoV-19/USA/ID-IBL-816443/2022 | K | 1227 | stop | 4 | 20220427 |
| EPI_ISL_19499252 | NSP3 | hCoV-19/USA/TX-HMH-M-146629/2024 | K | 1227 | G | 23 | 20240930 |
| EPI_ISL_19414478 | NSP3 | hCoV-19/Israel/SMC-7118326/2024 | K | 1227 | R | 529 | 20240826 |
| EPI_ISL_10546697 | NSP3 | hCoV-19/USA/NC-ASC-210589702/2022 | P | 1228 | F | 2 | 20220113 |
| EPI_ISL_1460414 | NSP3 | hCoV-19/USA/CA-CDC-FG-007977/2021 | P | 1228 | insQKWR | 1 | 20210310 |
| EPI_ISL_19329886 | NSP3 | hCoV-19/Canada/ON-PHL-202411055/2024 | P | 1228 | Q | 50 | 20240731 |
| EPI_ISL_19829182 | NSP3 | hCoV-19/USA/PA-CDC-LC1136782/2025 | P | 1228 | L | 2536866 | 20250403 |
| EPI_ISL_10062774 | NSP3 | hCoV-19/Denmark/DCGC-371848/2022 | P | 1228 | insMDVR | 1 | 20220212 |
| EPI_ISL_13617204 | NSP3 | hCoV-19/Scotland/SCOT-13654/2022 | P | 1228 | insLQV | 1 | 20220613 |
| EPI_ISL_9480781 | NSP3 | hCoV-19/Norway/1924/2022 | P | 1228 | I | 62 | 20220113 |
| EPI_ISL_7730994 | NSP3 | hCoV-19/Denmark/DCGC-266549/2021 | P | 1228 | V | 4 | 20211205 |
| EPI_ISL_8812990 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-111221-1251/2021 | P | 1228 | insM | 2 | 20211112 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | P | 1228 | D | 1 | 20201214 |
| EPI_ISL_14084888 | NSP3 | hCoV-19/Bahrain/R722690035638/2022 | P | 1228 | insIISV | 1 | 20220227 |
| EPI_ISL_19826557 | NSP3 | hCoV-19/USA/NY-PRL-250408_81C09/2025 | P | 1228 | S | 10853 | 20250327 |
| EPI_ISL_761314 | NSP3 | hCoV-19/England/ALDP-CB4342/2020 | P | 1228 | insIAWN | 2 | 20201218 |
| EPI_ISL_12934195 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-120521-1441/2021 | P | 1228 | stop | 5 | 20211205 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | P | 1228 | N | 1 | 20211222 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | P | 1228 | del | 240 | 20241021 |
| EPI_ISL_10741503 | NSP3 | hCoV-19/Austria/AGES-654152/2022 | P | 1228 | insVVNN | 1 | 20220201 |
| EPI_ISL_19593106 | NSP3 | hCoV-19/USA/MA-MASPHL-13052/2024 | P | 1228 | T | 375 | 20241105 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | P | 1228 | insSLstopR | 1 | 20210802 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1228 | K | 9 | 20220210 |
| EPI_ISL_10663815 | NSP3 | hCoV-19/South Korea/KDCA30365/2022 | P | 1228 | insSLLL | 2 | 20220205 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | P | 1228 | G | 8 | 20221018 |
| EPI_ISL_15542526 | NSP3 | hCoV-19/Sweden/03_SE600_500000168874SP/2022 | P | 1228 | insXX | 1 | 20221019 |
| EPI_ISL_16987246 | NSP3 | hCoV-19/USA/KS-KHEL-13225/2023 | P | 1228 | insGRE | 2 | 20230217 |
| EPI_ISL_15992636 | NSP3 | hCoV-19/USA/WI-WSLH-2207353/2022 | P | 1228 | insALVY | 3 | 20221101 |
| EPI_ISL_18100621 | NSP3 | hCoV-19/Japan/PG-537522/2023 | P | 1228 | insKAR | 1 | 20230614 |
| EPI_ISL_6106778 | NSP3 | hCoV-19/England/PLYM-291A3FC/2021 | P | 1228 | J | 2 | 20211102 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | P | 1228 | A | 44 | 20230624 |
| EPI_ISL_440548 | NSP3 | hCoV-19/England/CAMB-847B4/2020 | P | 1228 | insXXXX | 1 | 20200302 |
| EPI_ISL_16082228 | NSP3 | hCoV-19/USA/CA-CDC-STM-2AJSWFZQ8/2022 | P | 1228 | insRQSR | 2 | 20221127 |
| EPI_ISL_19406041 | NSP3 | hCoV-19/USA/CO-CDPHE-42194767/2024 | P | 1228 | R | 304 | 20240725 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | V | 1229 | M | 4 | 20220131 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | V | 1229 | R | 1 | 20221018 |
| EPI_ISL_17675953 | NSP3 | hCoV-19/USA/IL-5112023002/2023 | V | 1229 | insTYKLDGVVCTEID | 3 | 20230504 |
| EPI_ISL_8882807 | NSP3 | hCoV-19/India/GA-NCCS-VH78098/2021 | V | 1229 | C | 2 | 20210626 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | V | 1229 | S | 21 | 20230401 |
| EPI_ISL_19134683 | NSP3 | hCoV-19/USA/IL-RIPHL_32961_G/2024 | V | 1229 | A | 156 | 20240328 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | V | 1229 | K | 2 | 20240105 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | V | 1229 | Q | 1 | 20211222 |
| EPI_ISL_19828634 | NSP3 | hCoV-19/Japan/FR055-0192/2025 | V | 1229 | F | 6653 | 20250323 |
| EPI_ISL_19469023 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000510001/2024 | V | 1229 | I | 487 | 20240916 |
| EPI_ISL_12934302 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010622-1522/2022 | V | 1229 | stop | 5 | 20220106 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1229 | N | 1 | 20220210 |
| EPI_ISL_19806837 | NSP3 | hCoV-19/Spain/CL-UCHV-49914/2025 | V | 1229 | L | 56 | 20250218 |
| EPI_ISL_12544527 | NSP3 | hCoV-19/Indonesia/LA-NIHRD-WGS.22.04370/2022 | V | 1229 | D | 5 | 20220403 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | V | 1229 | T | 3 | 20210809 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | V | 1229 | del | 163 | 20241021 |
| EPI_ISL_10546697 | NSP3 | hCoV-19/USA/NC-ASC-210589702/2022 | V | 1229 | insstopRTDLXX | 1 | 20220113 |
| EPI_ISL_19563098 | NSP3 | hCoV-19/Netherlands/OV-RIVM-143582/2024 | V | 1229 | G | 45 | 20241025 |
| EPI_ISL_12934297 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1517/2021 | V | 1229 | Y | 1 | 20211231 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | S | 1230 | E | 1 | 20210813 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | S | 1230 | L | 22 | 20230401 |
| EPI_ISL_19791384 | NSP3 | hCoV-19/Russia/SPE-RII-MH225623S/2025 | S | 1230 | Y | 452 | 20250207 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | S | 1230 | del | 173 | 20241021 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | S | 1230 | insL | 2 | 20240105 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | S | 1230 | stop | 4 | 20230217 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | S | 1230 | insLstopR | 1 | 20200729 |
| EPI_ISL_17716047 | NSP3 | hCoV-19/Chile/AT-37483/2023 | S | 1230 | N | 25 | 20230504 |
| EPI_ISL_12934297 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1517/2021 | S | 1230 | H | 1 | 20211231 |
| EPI_ISL_19781698 | NSP3 | hCoV-19/Belgium/Sciensano-LS-S3100/2025 | S | 1230 | A | 363 | 20250218 |
| EPI_ISL_19646118 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000647001/2024 | S | 1230 | T | 367 | 20241202 |
| EPI_ISL_18416348 | NSP3 | hCoV-19/USA/MA-CDC-QDX86065328/2023 | S | 1230 | insE | 7 | 20231006 |
| EPI_ISL_11947061 | NSP3 | hCoV-19/England/DHSC-CYNN9PI/2021 | S | 1230 | insHSNL | 1 | 20211220 |
| EPI_ISL_12934302 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010622-1522/2022 | S | 1230 | W | 4 | 20220106 |
| EPI_ISL_19780452 | NSP3 | hCoV-19/USA/NY-PRL-250311_81G08/2025 | S | 1230 | F | 31494 | 20250226 |
| EPI_ISL_19804298 | NSP3 | hCoV-19/Ireland/D-SVUH-FBA52164-014/2025 | S | 1230 | P | 751 | 20250318 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | S | 1230 | R | 22 | 20230624 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | S | 1230 | K | 11 | 20230418 |
| EPI_ISL_18880734 | NSP3 | hCoV-19/USA/PA-CDC-LC1092960/2024 | S | 1230 | C | 5 | 20240125 |
| EPI_ISL_15846032 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-117578/2022 | E | 1231 | stop | 6 | 20221026 |
| EPI_ISL_19697027 | NSP3 | hCoV-19/USA/IL-RIPHL_123779_G/2025 | E | 1231 | G | 487 | 20250113 |
| EPI_ISL_19788938 | NSP3 | hCoV-19/USA/CA-GBW-GKPLAAAA41991/2025 | E | 1231 | D | 481 | 20250311 |
| EPI_ISL_19334470 | NSP3 | hCoV-19/Netherlands/NH-RIVM-140220/2024 | E | 1231 | V | 1229 | 20240723 |
| EPI_ISL_19475058 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-1626/2024 | E | 1231 | A | 253 | 20240812 |
| EPI_ISL_18269041 | NSP3 | hCoV-19/USA/MS-MSPHL-0570/2023 | E | 1231 | S | 7 | 20230815 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | E | 1231 | I | 1 | 20220305 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | E | 1231 | L | 2 | 20210801 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | E | 1231 | T | 7 | 20230401 |
| EPI_ISL_19584901 | NSP3 | hCoV-19/Japan/NCGM-03398/2022 | E | 1231 | Y | 3 | 20220422 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | E | 1231 | insstop | 1 | 20210915 |
| EPI_ISL_16314970 | NSP3 | hCoV-19/USA/ID-IBL-869775/2022 | E | 1231 | R | 8 | 20221214 |
| EPI_ISL_11184197 | NSP3 | hCoV-19/England/NEWC-3A50C37/2022 | E | 1231 | Z | 4 | 20220311 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | E | 1231 | N | 4 | 20230217 |
| EPI_ISL_8812990 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-111221-1251/2021 | E | 1231 | P | 3 | 20211112 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | E | 1231 | Q | 25 | 20230624 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1231 | F | 1 | 20220210 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | E | 1231 | del | 355 | 20241021 |
| EPI_ISL_19795371 | NSP3 | hCoV-19/USA/VA-CDC-LC1135548/2025 | E | 1231 | K | 3601 | 20250313 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | E | 1232 | stop | 3 | 20210801 |
| EPI_ISL_19706970 | NSP3 | hCoV-19/Greece/PHLnetwork_PEDY_THESSALIAS-12057/2024 | E | 1232 | G | 319 | 20241205 |
| EPI_ISL_11949065 | NSP3 | hCoV-19/England/DHSC-CYY1UQY/2022 | E | 1232 | insHVQIHTID | 1 | 20220126 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | E | 1232 | R | 4 | 20221018 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | E | 1232 | T | 5 | 20230217 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | E | 1232 | L | 4 | 20230123 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | E | 1232 | insLK | 1 | 20221012 |
| EPI_ISL_14443153 | NSP3 | hCoV-19/India/OR-ILSGS18746/2022 | E | 1232 | I | 5 | 20220731 |
| EPI_ISL_14488454 | NSP3 | hCoV-19/USA/ID-IBL-843609/2022 | E | 1232 | P | 2 | 20220805 |
| EPI_ISL_19721548 | NSP3 | hCoV-19/USA/WI-WSLH-2403369/2024 | E | 1232 | D | 640 | 20241217 |
| EPI_ISL_19806732 | NSP3 | hCoV-19/Spain/CL-UCHV-49913/2025 | E | 1232 | A | 67 | 20250217 |
| EPI_ISL_11033659 | NSP3 | hCoV-19/England/HSLL-39CA3BC/2022 | E | 1232 | Z | 3 | 20220307 |
| EPI_ISL_19351639 | NSP3 | hCoV-19/Netherlands/NB-RIVM-140445/2024 | E | 1232 | V | 27 | 20240713 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | E | 1232 | N | 1 | 20210118 |
| EPI_ISL_14488399 | NSP3 | hCoV-19/USA/ID-IBL-841396/2022 | E | 1232 | insstop | 1 | 20220731 |
| EPI_ISL_19772124 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10739/2025 | E | 1232 | K | 497 | 20250208 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | E | 1232 | insKC | 2 | 20230215 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | E | 1232 | del | 217 | 20241021 |
| EPI_ISL_18905459 | NSP3 | hCoV-19/USA/NV-NSPHL-CL-00045138/2023 | E | 1232 | Q | 7 | 20231222 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | E | 1232 | Y | 2 | 20230217 |
| EPI_ISL_16314970 | NSP3 | hCoV-19/USA/ID-IBL-869775/2022 | E | 1232 | S | 8 | 20221214 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | E | 1232 | H | 4 | 20220305 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | E | 1232 | insKstopWKI | 1 | 20210805 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | V | 1233 | insGWCCL | 1 | 20210424 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | V | 1233 | W | 1 | 20210809 |
| EPI_ISL_15998823 | NSP3 | hCoV-19/USA/ID-IBL-865139/2022 | V | 1233 | S | 4 | 20221116 |
| EPI_ISL_12544527 | NSP3 | hCoV-19/Indonesia/LA-NIHRD-WGS.22.04370/2022 | V | 1233 | G | 6 | 20220403 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1233 | K | 9 | 20220210 |
| EPI_ISL_16314970 | NSP3 | hCoV-19/USA/ID-IBL-869775/2022 | V | 1233 | R | 3 | 20221214 |
| EPI_ISL_16021279 | NSP3 | hCoV-19/Israel/SMC-7110158/2022 | V | 1233 | F | 6 | 20221127 |
| EPI_ISL_19315403 | NSP3 | hCoV-19/USA/ID-IBL-908541/2024 | V | 1233 | stop | 16 | 20240105 |
| EPI_ISL_19821110 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11211/2025 | V | 1233 | I | 378 | 20250322 |
| EPI_ISL_14488399 | NSP3 | hCoV-19/USA/ID-IBL-841396/2022 | V | 1233 | P | 1 | 20220731 |
| EPI_ISL_18717442 | NSP3 | hCoV-19/France/CVL-IPP31524/2023 | V | 1233 | A | 157 | 20231211 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | V | 1233 | T | 9 | 20230215 |
| EPI_ISL_19315379 | NSP3 | hCoV-19/Thailand/MTM_01_1354/2024 | V | 1233 | E | 8 | 20240118 |
| EPI_ISL_19758126 | NSP3 | hCoV-19/Singapore/Y25R9MSC46/2025 | V | 1233 | L | 1256 | 20250226 |
| EPI_ISL_8882807 | NSP3 | hCoV-19/India/GA-NCCS-VH78098/2021 | V | 1233 | Y | 2 | 20210626 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | V | 1233 | del | 218 | 20241021 |
| EPI_ISL_19629217 | NSP3 | hCoV-19/USA/CA-CDPH-500144630/2024 | V | 1234 | L | 833 | 20241103 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | V | 1234 | insKK | 1 | 20210118 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | V | 1234 | Y | 3 | 20220104 |
| EPI_ISL_19584901 | NSP3 | hCoV-19/Japan/NCGM-03398/2022 | V | 1234 | D | 2 | 20220422 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | V | 1234 | T | 2 | 20221012 |
| EPI_ISL_19602427 | NSP3 | hCoV-19/USA/CO-CDPHE-42481546/2024 | V | 1234 | A | 212 | 20241107 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | V | 1234 | S | 5 | 20211222 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | V | 1234 | I | 57 | 20230418 |
| EPI_ISL_19530684 | NSP3 | hCoV-19/Ireland/D-SVUH-FAZ13082-095/2024 | V | 1234 | M | 1414 | 20241025 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | V | 1234 | del | 174 | 20241021 |
| EPI_ISL_19649672 | NSP3 | hCoV-19/Sweden/M-SUS0023986/2024 | V | 1234 | G | 23 | 20241220 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | V | 1234 | stop | 5 | 20220205 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1234 | H | 1 | 20210318 |
| EPI_ISL_10858416 | NSP3 | hCoV-19/Turkey/HSGM-G2211/2022 | V | 1234 | K | 5 | 20220217 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | V | 1234 | insQQ | 1 | 20230217 |
| EPI_ISL_13453602 | NSP3 | hCoV-19/USA/ID-IBL-827091/2022 | V | 1234 | P | 2 | 20220609 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | V | 1234 | W | 12 | 20230401 |
| EPI_ISL_18968624 | NSP3 | hCoV-19/Japan/TKYnat16590/2024 | V | 1234 | E | 29 | 20240213 |
| EPI_ISL_14588245 | NSP3 | hCoV-19/USA/ID-IBL-843831/2022 | V | 1234 | R | 2 | 20220731 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | E | 1235 | M | 1 | 20220228 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | E | 1235 | R | 4 | 20220205 |
| EPI_ISL_16296009 | NSP3 | hCoV-19/Netherlands/NB-RIVM-121706/2022 | E | 1235 | insKSSL | 13 | 20221212 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | E | 1235 | insL | 1 | 20220305 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | E | 1235 | del | 144 | 20241021 |
| EPI_ISL_2190267 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-31631/2020 | E | 1235 | Z | 1 | 20201221 |
| EPI_ISL_13453602 | NSP3 | hCoV-19/USA/ID-IBL-827091/2022 | E | 1235 | Y | 4 | 20220609 |
| EPI_ISL_19749352 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00022583_01/2025 | E | 1235 | G | 152 | 20250114 |
| EPI_ISL_18936238 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00120/2023 | E | 1235 | stop | 54 | 20230418 |
| EPI_ISL_15517563 | NSP3 | hCoV-19/Australia/SA467153/2022 | E | 1235 | insN | 9 | 20221017 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | E | 1235 | insstopW | 1 | 20210816 |
| EPI_ISL_18602748 | NSP3 | hCoV-19/Shanxi/JCCDC-JCCX0529/2023 | E | 1235 | V | 30 | 20230925 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | E | 1235 | I | 1 | 20210809 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | E | 1235 | L | 2 | 20220117 |
| EPI_ISL_17709498 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000189505SP/2022 | E | 1235 | insKSY | 1 | 20220707 |
| EPI_ISL_18269041 | NSP3 | hCoV-19/USA/MS-MSPHL-0570/2023 | E | 1235 | Q | 4 | 20230815 |
| EPI_ISL_19472586 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGBGH/2024 | E | 1235 | D | 416 | 20240902 |
| EPI_ISL_19799618 | NSP3 | hCoV-19/USA/TX-HMH-M-147791/2025 | E | 1235 | K | 830 | 20250314 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | E | 1235 | P | 1 | 20210424 |
| EPI_ISL_12587559 | NSP3 | hCoV-19/Belgium/12202642401/2022 | E | 1235 | insKKG | 2 | 20220206 |
| EPI_ISL_19392273 | NSP3 | hCoV-19/USA/CA-SEARCH-141064/2024 | E | 1235 | insKAR | 1 | 20240707 |
| EPI_ISL_14588245 | NSP3 | hCoV-19/USA/ID-IBL-843831/2022 | E | 1235 | N | 2 | 20220731 |
| EPI_ISL_19641522 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09366/2024 | E | 1235 | A | 56 | 20241210 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | E | 1235 | S | 6 | 20230401 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | E | 1235 | F | 1 | 20221012 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | N | 1236 | F | 1 | 20221012 |
| EPI_ISL_6644115 | NSP3 | hCoV-19/USA/ID-CDC-ASC210321105/2021 | N | 1236 | insILRL | 1 | 20210929 |
| EPI_ISL_18233147 | NSP3 | hCoV-19/Singapore/R62MR57/2023 | N | 1236 | B | 63 | 20230829 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | N | 1236 | Q | 1 | 20211006 |
| EPI_ISL_19584901 | NSP3 | hCoV-19/Japan/NCGM-03398/2022 | N | 1236 | V | 1 | 20220422 |
| EPI_ISL_12553326 | NSP3 | hCoV-19/England/QEUH-3D59D0B/2022 | N | 1236 | insRRAF | 1 | 20220411 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | N | 1236 | I | 91 | 20230401 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | N | 1236 | Y | 96 | 20241001 |
| EPI_ISL_9217680 | NSP3 | hCoV-19/Germany/NW-RKI-I-464538/2022 | N | 1236 | insALRI | 1 | 20220118 |
| EPI_ISL_18854333 | NSP3 | hCoV-19/Japan/PG-591903/2024 | N | 1236 | insLDIF | 1 | 20240118 |
| EPI_ISL_19735388 | NSP3 | hCoV-19/Japan/FR062-0060/2025 | N | 1236 | H | 337 | 20250205 |
| EPI_ISL_3756896 | NSP3 | hCoV-19/USA/ID-IBL-746949/2021 | N | 1236 | insY | 1 | 20210806 |
| EPI_ISL_19310505 | NSP3 | hCoV-19/Canada/QC-L00763784001/2024 | N | 1236 | insSV | 4 | 20240722 |
| EPI_ISL_16514060 | NSP3 | hCoV-19/South Korea/KDCA188709/2022 | N | 1236 | insDIR | 1 | 20221216 |
| EPI_ISL_13453602 | NSP3 | hCoV-19/USA/ID-IBL-827091/2022 | N | 1236 | R | 2 | 20220609 |
| EPI_ISL_16860088 | NSP3 | hCoV-19/Albania/IPH-268627_2/2022 | N | 1236 | insDRR | 1 | 20220209 |
| EPI_ISL_19831933 | NSP3 | hCoV-19/England/CLIMB-CM7YGII8/2025 | N | 1236 | S | 723 | 20250406 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | N | 1236 | E | 3 | 20230401 |
| EPI_ISL_2797123 | NSP3 | hCoV-19/USA/CA-CDPH-2000035214/2021 | N | 1236 | insRVI | 1 | 20210203 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | N | 1236 | L | 2 | 20210809 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | N | 1236 | del | 145 | 20241021 |
| EPI_ISL_15446054 | NSP3 | hCoV-19/Germany/NW-RKI-I-998820/2022 | N | 1236 | insS | 2 | 20220920 |
| EPI_ISL_19549313 | NSP3 | hCoV-19/Germany/BY-MVP-000025796/2024 | N | 1236 | D | 1100 | 20241014 |
| EPI_ISL_19596183 | NSP3 | hCoV-19/England/CLIMB-CM7YGWB3/2024 | N | 1236 | K | 100 | 20241023 |
| EPI_ISL_19341629 | NSP3 | hCoV-19/Japan/FR011-0503/2024 | N | 1236 | T | 130 | 20240719 |
| EPI_ISL_8882807 | NSP3 | hCoV-19/India/GA-NCCS-VH78098/2021 | N | 1236 | stop | 1 | 20210626 |
| EPI_ISL_19392273 | NSP3 | hCoV-19/USA/CA-SEARCH-141064/2024 | N | 1236 | G | 4 | 20240707 |
| EPI_ISL_18896812 | NSP3 | hCoV-19/Germany/TH-RKI-I-1142481/2024 | P | 1237 | T | 77 | 20240118 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | P | 1237 | Q | 41 | 20230106 |
| EPI_ISL_19786249 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12649-P0/2025 | P | 1237 | S | 3666 | 20250301 |
| EPI_ISL_19826788 | NSP3 | hCoV-19/USA/MN-MDH-46651/2025 | P | 1237 | L | 1192 | 20250325 |
| EPI_ISL_13453602 | NSP3 | hCoV-19/USA/ID-IBL-827091/2022 | P | 1237 | K | 5 | 20220609 |
| EPI_ISL_18968402 | NSP3 | hCoV-19/USA/MN-MDH-40868/2024 | P | 1237 | A | 67 | 20240219 |
| EPI_ISL_14488454 | NSP3 | hCoV-19/USA/ID-IBL-843609/2022 | P | 1237 | N | 1 | 20220805 |
| EPI_ISL_10924581 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11811/2022 | P | 1237 | G | 1 | 20220228 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | P | 1237 | E | 2 | 20230401 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | P | 1237 | insGKSYH | 2 | 20220205 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | P | 1237 | F | 2 | 20230215 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | P | 1237 | insSYH | 1 | 20211222 |
| EPI_ISL_8812990 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-111221-1251/2021 | P | 1237 | stop | 9 | 20211112 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | P | 1237 | I | 4 | 20230401 |
| EPI_ISL_12934346 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011722-1566/2022 | P | 1237 | insGKIL | 1 | 20220117 |
| EPI_ISL_19710400 | NSP3 | hCoV-19/French Guiana/IPG-202400216/2024 | P | 1237 | R | 5 | 20240624 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | P | 1237 | del | 528 | 20241021 |
| EPI_ISL_11933452 | NSP3 | hCoV-19/England/DHSC-CYD1C15/2022 | P | 1237 | insIKLstop | 1 | 20220209 |
| EPI_ISL_15998823 | NSP3 | hCoV-19/USA/ID-IBL-865139/2022 | P | 1237 | Y | 7 | 20221116 |
| EPI_ISL_19341928 | NSP3 | hCoV-19/Japan/FR011-0599/2024 | P | 1237 | H | 220 | 20240807 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | P | 1237 | D | 18 | 20230624 |
| EPI_ISL_19584901 | NSP3 | hCoV-19/Japan/NCGM-03398/2022 | P | 1237 | V | 2 | 20220422 |
| EPI_ISL_19821925 | NSP3 | hCoV-19/USA/NY-CDC-LC1136037/2025 | T | 1238 | I | 2227 | 20250327 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | T | 1238 | V | 20 | 20230624 |
| EPI_ISL_11942899 | NSP3 | hCoV-19/England/DHSC-CYDY44N/2021 | T | 1238 | stop | 1 | 20211219 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1238 | D | 1 | 20221012 |
| EPI_ISL_19192568 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16000/2024 | T | 1238 | P | 29 | 20240321 |
| EPI_ISL_12934306 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1526/2022 | T | 1238 | G | 1 | 20220107 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | T | 1238 | Y | 2 | 20210803 |
| EPI_ISL_18743464 | NSP3 | hCoV-19/USA/TX-HMH-M-136577/2023 | T | 1238 | S | 62 | 20231220 |
| EPI_ISL_19326397 | NSP3 | hCoV-19/Sweden/M-SUS0023310/2024 | T | 1238 | N | 97 | 20240802 |
| EPI_ISL_17709498 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000189505SP/2022 | T | 1238 | E | 1 | 20220707 |
| EPI_ISL_19452664 | NSP3 | hCoV-19/USA/NY-CDC-LC1121612/2024 | T | 1238 | A | 81 | 20240915 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | T | 1238 | insKIstopNstopSLKKstopWKILP | 1 | 20210809 |
| EPI_ISL_11944346 | NSP3 | hCoV-19/England/DHSC-CYN76ZK/2022 | T | 1238 | insTFSPRPRG | 1 | 20220111 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | T | 1238 | Q | 1 | 20220104 |
| EPI_ISL_15998823 | NSP3 | hCoV-19/USA/ID-IBL-865139/2022 | T | 1238 | H | 2 | 20221116 |
| EPI_ISL_12447432 | NSP3 | hCoV-19/Luxembourg/LNS8316369/2022 | T | 1238 | insSLK | 1 | 20220314 |
| EPI_ISL_18287761 | NSP3 | hCoV-19/France/IDF-AphpSA-882308018551/2023 | T | 1238 | L | 26 | 20230805 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | T | 1238 | insFLS | 1 | 20210805 |
| EPI_ISL_19584901 | NSP3 | hCoV-19/Japan/NCGM-03398/2022 | T | 1238 | C | 1 | 20220422 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | T | 1238 | del | 513 | 20241021 |
| EPI_ISL_11949094 | NSP3 | hCoV-19/England/DHSC-CYY367E/2022 | T | 1238 | K | 1 | 20220210 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | T | 1238 | F | 2 | 20230217 |
| EPI_ISL_19753168 | NSP3 | hCoV-19/USA/NV-SNPHL-834413/2025 | I | 1239 | V | 501 | 20250216 |
| EPI_ISL_13453602 | NSP3 | hCoV-19/USA/ID-IBL-827091/2022 | I | 1239 | F | 3 | 20220609 |
| EPI_ISL_12447899 | NSP3 | hCoV-19/Luxembourg/LNS0200616/2022 | I | 1239 | S | 1 | 20220314 |
| EPI_ISL_17408224 | NSP3 | hCoV-19/Germany/HH-RKI-I-1129753/2023 | I | 1239 | K | 108 | 20230326 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | I | 1239 | del | 495 | 20241021 |
| EPI_ISL_19782781 | NSP3 | hCoV-19/Chile/VS-ISPC-18571/2025 | I | 1239 | T | 1350 | 20250303 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1239 | A | 1 | 20210318 |
| EPI_ISL_19506781 | NSP3 | hCoV-19/USA/NJ-PHEL-V24012079/2024 | I | 1239 | L | 235 | 20240927 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | I | 1239 | E | 28 | 20230624 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | I | 1239 | H | 1 | 20210803 |
| EPI_ISL_19671858 | NSP3 | hCoV-19/Spain/AN-PMC-42525/2024 | I | 1239 | M | 199 | 20240614 |
| EPI_ISL_19192568 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16000/2024 | I | 1239 | Y | 28 | 20240321 |
| EPI_ISL_18700996 | NSP3 | hCoV-19/Singapore/R92MR177/2023 | I | 1239 | J | 7 | 20231213 |
| EPI_ISL_11942899 | NSP3 | hCoV-19/England/DHSC-CYDY44N/2021 | I | 1239 | C | 2 | 20211219 |
| EPI_ISL_17523359 | NSP3 | hCoV-19/USA/TX-HMH-M-127465/2023 | I | 1239 | N | 2 | 20230322 |
| EPI_ISL_19507698 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293837/2024 | I | 1239 | R | 43 | 20241012 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | I | 1239 | W | 1 | 20220305 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | Q | 1240 | E | 16 | 20230401 |
| EPI_ISL_18726266 | NSP3 | hCoV-19/Singapore/R1MQ180/2023 | Q | 1240 | L | 25 | 20231213 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | Q | 1240 | M | 3 | 20230217 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | Q | 1240 | V | 4 | 20220812 |
| EPI_ISL_12934306 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1526/2022 | Q | 1240 | insYHT | 1 | 20220107 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | Q | 1240 | C | 1 | 20230106 |
| EPI_ISL_19824668 | NSP3 | hCoV-19/Japan/TKYnat18397/2025 | Q | 1240 | H | 841 | 20250329 |
| EPI_ISL_19150677 | NSP3 | hCoV-19/Sichuan/GACDC-18240216/2024 | Q | 1240 | K | 393 | 20240407 |
| EPI_ISL_19629479 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422196718/2024 | Q | 1240 | R | 469 | 20241105 |
| EPI_ISL_14432244 | NSP3 | hCoV-19/Germany/HB-RKI-I-947289/2022 | Q | 1240 | P | 16 | 20220728 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | Q | 1240 | S | 4 | 20220227 |
| EPI_ISL_13453602 | NSP3 | hCoV-19/USA/ID-IBL-827091/2022 | Q | 1240 | stop | 9 | 20220609 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | Q | 1240 | F | 1 | 20200715 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | Q | 1240 | I | 2 | 20220104 |
| EPI_ISL_1858347 | NSP3 | hCoV-19/Denmark/DCGC-50892/2020 | Q | 1240 | Z | 1 | 20201214 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | Q | 1240 | del | 493 | 20241021 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | Q | 1240 | T | 20 | 20230624 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | Q | 1240 | N | 1 | 20221012 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1240 | D | 2 | 20220210 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | K | 1241 | stop | 4 | 20210805 |
| EPI_ISL_19344431 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS501214/2024 | K | 1241 | Q | 124 | 20240810 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | K | 1241 | V | 3 | 20220305 |
| EPI_ISL_11949094 | NSP3 | hCoV-19/England/DHSC-CYY367E/2022 | K | 1241 | insXXXX | 1 | 20220210 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 1241 | G | 2 | 20221012 |
| EPI_ISL_9973658 | NSP3 | hCoV-19/France/NOR-HMN-22012260752/2022 | K | 1241 | L | 2 | 20220114 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | K | 1241 | M | 2 | 20230217 |
| EPI_ISL_18319446 | NSP3 | hCoV-19/USA/CA-HLX-STM-CADR2JAXP/2023 | K | 1241 | T | 36 | 20230828 |
| EPI_ISL_15629638 | NSP3 | hCoV-19/Wales/QEUH-325AE938/2022 | K | 1241 | insSVGQ | 2 | 20221005 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | K | 1241 | del | 490 | 20241021 |
| EPI_ISL_13453602 | NSP3 | hCoV-19/USA/ID-IBL-827091/2022 | K | 1241 | D | 1 | 20220609 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 1241 | insstopW | 48 | 20230101 |
| EPI_ISL_19643307 | NSP3 | hCoV-19/Spain/CL-UCHV-49643/2024 | K | 1241 | R | 6378 | 20241104 |
| EPI_ISL_19337656 | NSP3 | hCoV-19/USA/IL-RIPHL_14675_G/2024 | K | 1241 | E | 270 | 20240723 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | K | 1241 | S | 6 | 20230123 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | K | 1241 | H | 1 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1241 | W | 2 | 20220210 |
| EPI_ISL_19573246 | NSP3 | hCoV-19/USA/CT-DPH-1253913001/2024 | K | 1241 | I | 16 | 20241008 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | K | 1241 | P | 1 | 20230401 |
| EPI_ISL_19511014 | NSP3 | hCoV-19/USA/LA-EVTL23092/2024 | K | 1241 | N | 756 | 20240925 |
| EPI_ISL_19192568 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16000/2024 | D | 1242 | T | 42 | 20240321 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | D | 1242 | Q | 1 | 20210118 |
| EPI_ISL_19829535 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022637_01/2025 | D | 1242 | Y | 1933 | 20250205 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | D | 1242 | R | 9 | 20230123 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | D | 1242 | A | 37 | 20241001 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | D | 1242 | insR | 1 | 20210801 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | D | 1242 | S | 10 | 20230217 |
| EPI_ISL_12447899 | NSP3 | hCoV-19/Luxembourg/LNS0200616/2022 | D | 1242 | I | 2 | 20220314 |
| EPI_ISL_19384522 | NSP3 | hCoV-19/Hubei/HCDC-HG6760/2024 | D | 1242 | H | 6 | 20240806 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | D | 1242 | L | 5 | 20230106 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | D | 1242 | del | 477 | 20241021 |
| EPI_ISL_509412 | NSP3 | hCoV-19/Turkey/ACUTG-1/2020 | D | 1242 | insRM | 2 | 20200413 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | D | 1242 | P | 2 | 20230401 |
| EPI_ISL_11355418 | NSP3 | hCoV-19/France/GES-ChNa-210059856201/2021 | D | 1242 | insXstop | 1 | 20210717 |
| EPI_ISL_19383671 | NSP3 | hCoV-19/Japan/FR088-0194/2024 | D | 1242 | G | 412 | 20240828 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | D | 1242 | K | 49 | 20230217 |
| EPI_ISL_19181920 | NSP3 | hCoV-19/Singapore/R26MQ79/2024 | D | 1242 | B | 10 | 20240506 |
| EPI_ISL_17713363 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000173797SP/2022 | D | 1242 | insXX | 2 | 20220929 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | D | 1242 | stop | 1 | 20220104 |
| EPI_ISL_11686658 | NSP3 | hCoV-19/Indonesia/KU-NIHRD-WGS_22_03503/2022 | D | 1242 | V | 4 | 20220220 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | D | 1242 | F | 2 | 20210521 |
| EPI_ISL_19584901 | NSP3 | hCoV-19/Japan/NCGM-03398/2022 | D | 1242 | insSXXXXXXXXXXXX | 1 | 20220422 |
| EPI_ISL_19792781 | NSP3 | hCoV-19/USA/NY-PRL-250318_82C07/2025 | D | 1242 | N | 1176 | 20250307 |
| EPI_ISL_19572340 | NSP3 | hCoV-19/USA/TX-UM-G56Z73J6/2024 | D | 1242 | E | 329 | 20241009 |
| EPI_ISL_18903259 | NSP3 | hCoV-19/USA/CA-HLX-STM-SXQHUSEWU/2024 | V | 1243 | G | 91 | 20240110 |
| EPI_ISL_14488454 | NSP3 | hCoV-19/USA/ID-IBL-843609/2022 | V | 1243 | S | 3 | 20220805 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | V | 1243 | R | 2 | 20210803 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | V | 1243 | stop | 6 | 20220205 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | V | 1243 | insPPAQ | 1 | 20230217 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | V | 1243 | E | 1 | 20220207 |
| EPI_ISL_19721471 | NSP3 | hCoV-19/USA/WI-WSLH-2403291/2024 | V | 1243 | A | 964 | 20241209 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | V | 1243 | P | 1 | 20210118 |
| EPI_ISL_19829256 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11255/2025 | V | 1243 | F | 5582 | 20250325 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | V | 1243 | T | 5 | 20230401 |
| EPI_ISL_19009565 | NSP3 | hCoV-19/Japan/PG-580949/2023 | V | 1243 | L | 76 | 20231030 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | V | 1243 | Y | 2 | 20220117 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | V | 1243 | del | 500 | 20241021 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | V | 1243 | K | 2 | 20220104 |
| EPI_ISL_19750440 | NSP3 | hCoV-19/Canada/QC-L00838423001/2025 | V | 1243 | I | 3860 | 20250124 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | V | 1243 | N | 5 | 20220131 |
| EPI_ISL_17695318 | NSP3 | hCoV-19/Peru/PIU-INS-44383/2023 | V | 1243 | D | 7 | 20230330 |
| EPI_ISL_2373810 | NSP3 | hCoV-19/France/NAQ-HCL021092784401/2021 | V | 1243 | insRQTW | 1 | 20210511 |
| EPI_ISL_15387019 | NSP3 | hCoV-19/Morocco/FMP391/2021 | L | 1244 | M | 2 | 20211227 |
| EPI_ISL_16378581 | NSP3 | hCoV-19/Canada/ON-KHS-22-17153-v1/2022 | L | 1244 | insEMAR | 6 | 20221221 |
| EPI_ISL_12447899 | NSP3 | hCoV-19/Luxembourg/LNS0200616/2022 | L | 1244 | E | 1 | 20220314 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | L | 1244 | D | 2 | 20241001 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1244 | V | 39 | 20230624 |
| EPI_ISL_19689028 | NSP3 | hCoV-19/USA/NY-URMC-P3S1T672-1/2025 | L | 1244 | I | 236 | 20250104 |
| EPI_ISL_19829215 | NSP3 | hCoV-19/USA/FL-CDC-LC1136442/2025 | L | 1244 | F | 13668 | 20250403 |
| EPI_ISL_11355418 | NSP3 | hCoV-19/France/GES-ChNa-210059856201/2021 | L | 1244 | stop | 2 | 20210717 |
| EPI_ISL_17028531 | NSP3 | hCoV-19/Chile/ML-ISPC-98760/2021 | L | 1244 | insLKPA | 1 | 20210523 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | L | 1244 | G | 2 | 20210727 |
| EPI_ISL_19054933 | NSP3 | hCoV-19/Japan/FR028-0011/2024 | L | 1244 | H | 7 | 20240307 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | L | 1244 | A | 1 | 20230401 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | L | 1244 | N | 1 | 20220207 |
| EPI_ISL_19595437 | NSP3 | hCoV-19/Yunnan/YNCDC-2428/2024 | L | 1244 | R | 45 | 20240827 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 1244 | K | 2 | 20220812 |
| EPI_ISL_15998823 | NSP3 | hCoV-19/USA/ID-IBL-865139/2022 | L | 1244 | S | 5 | 20221116 |
| EPI_ISL_19770382 | NSP3 | hCoV-19/Spain/AS-HUCA-232515976/2025 | L | 1244 | J | 64 | 20250224 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | L | 1244 | Y | 3 | 20230217 |
| EPI_ISL_11334735 | NSP3 | hCoV-19/England/LSPA-3B3C580/2022 | L | 1244 | insXXX | 1 | 20220317 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | L | 1244 | del | 473 | 20241021 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | L | 1244 | T | 4 | 20220305 |
| EPI_ISL_19667723 | NSP3 | hCoV-19/Poland/Kce-3/2025 | L | 1244 | P | 286 | 20250107 |
| EPI_ISL_19711747 | NSP3 | hCoV-19/South Korea/KDCA296900/2025 | E | 1245 | G | 565 | 20250115 |
| EPI_ISL_19080565 | NSP3 | hCoV-19/Chongqing/CQCDC-5308/2023 | E | 1245 | Q | 12 | 20230923 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 1245 | P | 50 | 20230101 |
| EPI_ISL_19831380 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56879/2025 | E | 1245 | D | 662 | 20250402 |
| EPI_ISL_19791172 | NSP3 | hCoV-19/Brazil/MS-FIOCRUZ-FMS778/2025 | E | 1245 | K | 357 | 20250224 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | E | 1245 | C | 1 | 20210521 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | E | 1245 | del | 472 | 20241021 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | E | 1245 | R | 4 | 20220728 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | E | 1245 | S | 30 | 20230401 |
| EPI_ISL_11336335 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0531/2021 | E | 1245 | L | 3 | 20211218 |
| EPI_ISL_8618879 | NSP3 | hCoV-19/England/BRBR-312875E/2022 | E | 1245 | Z | 2 | 20220105 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | E | 1245 | stop | 12 | 20220205 |
| EPI_ISL_18287761 | NSP3 | hCoV-19/France/IDF-AphpSA-882308018551/2023 | E | 1245 | N | 26 | 20230805 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | E | 1245 | Y | 2 | 20210121 |
| EPI_ISL_19588246 | NSP3 | hCoV-19/Denmark/DCGC-690846/2024 | E | 1245 | V | 191 | 20241118 |
| EPI_ISL_19546818 | NSP3 | hCoV-19/Spain/VC-CVA_ALIC-125720/2024 | E | 1245 | A | 80 | 20240702 |
| EPI_ISL_14333837 | NSP3 | hCoV-19/USA/ID-IBL-841153/2022 | E | 1245 | insstop | 1 | 20220728 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | C | 1246 | A | 1 | 20220117 |
| EPI_ISL_12583886 | NSP3 | hCoV-19/Turkey/HSGM-GS2783/2022 | C | 1246 | S | 13 | 20220407 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | C | 1246 | I | 3 | 20221012 |
| EPI_ISL_19180378 | NSP3 | hCoV-19/Australia/NSW-ICPMR-53965/2024 | C | 1246 | G | 15 | 20240522 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | C | 1246 | del | 480 | 20241021 |
| EPI_ISL_16833718 | NSP3 | hCoV-19/Thailand/DMSc-13910/2022 | C | 1246 | insEAKKVKPTVVVNAA | 1 | 20220624 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | C | 1246 | N | 3 | 20230401 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | C | 1246 | T | 3 | 20230215 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | C | 1246 | insstopHKQstop | 1 | 20200715 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | C | 1246 | Q | 1 | 20230106 |
| EPI_ISL_1237268 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-27486/2021 | C | 1246 | stop | 2 | 20210218 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | C | 1246 | V | 32 | 20230401 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | C | 1246 | insLKLS | 18 | 20230624 |
| EPI_ISL_19536824 | NSP3 | hCoV-19/Germany/BY-LGL-6382208/2024 | C | 1246 | Y | 359 | 20241014 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | C | 1246 | insL | 1 | 20210326 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | C | 1246 | K | 4 | 20230401 |
| EPI_ISL_19287895 | NSP3 | hCoV-19/Taiwan/CDC-W39117/2024 | C | 1246 | R | 136 | 20240722 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1246 | D | 1 | 20210318 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | C | 1246 | insD | 1 | 20210424 |
| EPI_ISL_19565275 | NSP3 | hCoV-19/France/OCC-RELAB-HCL724000597701/2024 | C | 1246 | F | 24 | 20241105 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | C | 1246 | L | 3 | 20230217 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | C | 1246 | E | 1 | 20210727 |
| EPI_ISL_18515899 | NSP3 | hCoV-19/Brazil/SP-FIOCRUZ-11671/2023 | C | 1246 | W | 5 | 20230928 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | C | 1246 | M | 2 | 20230217 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | C | 1246 | insE | 3 | 20220205 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | N | 1247 | insNFR | 2 | 20230215 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | N | 1247 | stop | 4 | 20220117 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | N | 1247 | L | 1 | 20210727 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | N | 1247 | del | 477 | 20241021 |
| EPI_ISL_18825862 | NSP3 | hCoV-19/Spain/CM-HGUCR-404219/2024 | N | 1247 | T | 113 | 20240104 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1247 | R | 51 | 20230101 |
| EPI_ISL_19779693 | NSP3 | hCoV-19/Wales/CLIMB-CM7Y8DW5/2025 | N | 1247 | S | 2684 | 20250222 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | N | 1247 | E | 8 | 20220131 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | N | 1247 | H | 20 | 20230624 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | N | 1247 | M | 24 | 20230401 |
| EPI_ISL_19662618 | NSP3 | hCoV-19/Singapore/R60MQ66/2024 | N | 1247 | B | 11 | 20241105 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | N | 1247 | C | 1 | 20220812 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1247 | A | 1 | 20220210 |
| EPI_ISL_19642542 | NSP3 | hCoV-19/USA/CA-PFZ01798/2024 | N | 1247 | D | 818 | 20241128 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | N | 1247 | V | 2 | 20210803 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | N | 1247 | G | 8 | 20230123 |
| EPI_ISL_19422752 | NSP3 | hCoV-19/Spain/MD-HGUGM-65701826/2024 | N | 1247 | Y | 32 | 20240723 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | N | 1247 | insKTFLSV | 1 | 20210807 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | N | 1247 | I | 17 | 20230106 |
| EPI_ISL_19530904 | NSP3 | hCoV-19/Japan/FR011-0851/2024 | N | 1247 | K | 28 | 20241018 |
| EPI_ISL_17623942 | NSP3 | hCoV-19/Thailand/NIC_SNI_1709/2023 | V | 1248 | insXXX | 1 | 20230405 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | V | 1248 | D | 4 | 20220131 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | V | 1248 | K | 46 | 20230217 |
| EPI_ISL_19810592 | NSP3 | hCoV-19/USA/KY-KSPHL-0003789/2025 | V | 1248 | A | 157 | 20250114 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | V | 1248 | P | 3 | 20220117 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | V | 1248 | Q | 20 | 20230624 |
| EPI_ISL_19818405 | NSP3 | hCoV-19/France/ARA-RELAB-IPP03805/2025 | V | 1248 | M | 465 | 20250312 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | V | 1248 | stop | 27 | 20230401 |
| EPI_ISL_19192463 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16031/2024 | V | 1248 | insK | 1 | 20240315 |
| EPI_ISL_18498666 | NSP3 | hCoV-19/USA/MN-MDH-37326/2023 | V | 1248 | E | 14 | 20231026 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | V | 1248 | Y | 5 | 20221012 |
| EPI_ISL_19275956 | NSP3 | hCoV-19/France/NAQ-HCL724000248401/2024 | V | 1248 | G | 7 | 20240624 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | V | 1248 | del | 485 | 20241021 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | V | 1248 | S | 1 | 20210727 |
| EPI_ISL_11336335 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0531/2021 | V | 1248 | R | 3 | 20211218 |
| EPI_ISL_17623942 | NSP3 | hCoV-19/Thailand/NIC_SNI_1709/2023 | V | 1248 | T | 2 | 20230405 |
| EPI_ISL_15792386 | NSP3 | hCoV-19/Chile/AR-123652/2022 | V | 1248 | insNLLFGMLTM | 1 | 20221025 |
| EPI_ISL_19358366 | NSP3 | hCoV-19/Canada/ON-PHL-202412179/2024 | V | 1248 | L | 385 | 20240820 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | V | 1248 | H | 2 | 20230217 |
| EPI_ISL_18287761 | NSP3 | hCoV-19/France/IDF-AphpSA-882308018551/2023 | V | 1248 | I | 27 | 20230805 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | V | 1248 | C | 3 | 20210815 |
| EPI_ISL_6599852 | NSP3 | hCoV-19/Thailand/19832/2021 | K | 1249 | Y | 1 | 20211030 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | K | 1249 | L | 5 | 20230401 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | K | 1249 | S | 21 | 20230624 |
| EPI_ISL_19536482 | NSP3 | hCoV-19/USA/NY-SUNYQB-3831770/2024 | K | 1249 | R | 284 | 20241021 |
| EPI_ISL_19767654 | NSP3 | hCoV-19/South Korea/KDCA297023/2025 | K | 1249 | Q | 334 | 20250127 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | K | 1249 | insFVstop | 2 | 20220718 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 1249 | insHYTP | 1 | 20221012 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | K | 1249 | P | 1 | 20230106 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | K | 1249 | F | 1 | 20220305 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | K | 1249 | A | 1 | 20220104 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | K | 1249 | H | 1 | 20210805 |
| EPI_ISL_19517883 | NSP3 | hCoV-19/Denmark/DCGC-690140/2024 | K | 1249 | E | 367 | 20241007 |
| EPI_ISL_17715981 | NSP3 | hCoV-19/Chile/RM-36617/2023 | K | 1249 | insLLFGML | 4 | 20230503 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | K | 1249 | G | 1 | 20230217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1249 | D | 1 | 20201214 |
| EPI_ISL_18454260 | NSP3 | hCoV-19/Thailand/NIC_BKK_SJRV951/2023 | K | 1249 | V | 2 | 20230816 |
| EPI_ISL_19655275 | NSP3 | hCoV-19/Japan/FR062-0562/2024 | K | 1249 | N | 121 | 20241225 |
| EPI_ISL_19649034 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-2368/2024 | K | 1249 | I | 9 | 20241203 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | K | 1249 | del | 499 | 20241021 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | K | 1249 | M | 1 | 20200729 |
| EPI_ISL_19229559 | NSP3 | hCoV-19/Luxembourg/LNS0002120/2024 | K | 1249 | T | 103 | 20240425 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | T | 1250 | C | 4 | 20220718 |
| EPI_ISL_13136830 | NSP3 | hCoV-19/Mexico/YUC-NYGC-2424-SM/2021 | T | 1250 | K | 5 | 20211105 |
| EPI_ISL_19638382 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YKZ1I/2024 | T | 1250 | P | 799 | 20241209 |
| EPI_ISL_19768592 | NSP3 | hCoV-19/Australia/WA16791/2025 | T | 1250 | N | 612 | 20250217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1250 | G | 2 | 20220210 |
| EPI_ISL_18454260 | NSP3 | hCoV-19/Thailand/NIC_BKK_SJRV951/2023 | T | 1250 | F | 47 | 20230816 |
| EPI_ISL_19750529 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12427-P0/2025 | T | 1250 | I | 3283 | 20250129 |
| EPI_ISL_15416636 | NSP3 | hCoV-19/USA/ID-IBL-855071/2022 | T | 1250 | R | 1 | 20220920 |
| EPI_ISL_19791337 | NSP3 | hCoV-19/Russia/NGR-RII-MH226721S/2025 | T | 1250 | A | 315 | 20250206 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | T | 1250 | L | 35 | 20230401 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | T | 1250 | M | 1 | 20230217 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | T | 1250 | E | 1 | 20230401 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | T | 1250 | D | 18 | 20230624 |
| EPI_ISL_14488454 | NSP3 | hCoV-19/USA/ID-IBL-843609/2022 | T | 1250 | Y | 3 | 20220805 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | T | 1250 | Q | 1 | 20220305 |
| EPI_ISL_19091019 | NSP3 | hCoV-19/Netherlands/GE-RIVM-138410/2024 | T | 1250 | S | 99 | 20240411 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | T | 1250 | del | 502 | 20241021 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | T | 1250 | V | 3 | 20230217 |
| EPI_ISL_17711374 | NSP3 | hCoV-19/Thailand/NIC_SKM_2799/2023 | T | 1251 | S | 9 | 20230429 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | T | 1251 | G | 1 | 20230217 |
| EPI_ISL_19819922 | NSP3 | hCoV-19/Canada/ON-HRL-20251019405442-v1/2025 | T | 1251 | N | 1002 | 20250313 |
| EPI_ISL_18115490 | NSP3 | hCoV-19/Thailand/NIC_BKK_7015/2023 | T | 1251 | Y | 3 | 20230707 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | T | 1251 | stop | 1 | 20200729 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | T | 1251 | C | 3 | 20230401 |
| EPI_ISL_19761286 | NSP3 | hCoV-19/Japan/TKYnat18360/2025 | T | 1251 | A | 71 | 20250216 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1251 | H | 1 | 20220210 |
| EPI_ISL_19739266 | NSP3 | hCoV-19/Netherlands/NB-RIVM-145113/2025 | T | 1251 | I | 3160 | 20250130 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | T | 1251 | insIstopW | 1 | 20220104 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | T | 1251 | P | 166 | 20230401 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 1251 | D | 1 | 20220812 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | T | 1251 | Q | 1 | 20220104 |
| EPI_ISL_17711371 | NSP3 | hCoV-19/Thailand/NIC_NYK_2009/2023 | T | 1251 | V | 3 | 20230428 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | T | 1251 | L | 51 | 20230123 |
| EPI_ISL_6599852 | NSP3 | hCoV-19/Thailand/19832/2021 | T | 1251 | R | 4 | 20211030 |
| EPI_ISL_18454260 | NSP3 | hCoV-19/Thailand/NIC_BKK_SJRV951/2023 | T | 1251 | F | 4 | 20230816 |
| EPI_ISL_17715981 | NSP3 | hCoV-19/Chile/RM-36617/2023 | T | 1251 | M | 4 | 20230503 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | T | 1251 | del | 525 | 20241021 |
| EPI_ISL_19781293 | NSP3 | hCoV-19/Slovenia/IMI-V0-1761/2025 | E | 1252 | A | 474 | 20250311 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | E | 1252 | L | 1 | 20220104 |
| EPI_ISL_19803635 | NSP3 | hCoV-19/USA/WI-WSLH-2500843/2025 | E | 1252 | G | 592 | 20250215 |
| EPI_ISL_10220517 | NSP3 | hCoV-19/France/GES-HMN-22022030666/2022 | E | 1252 | Z | 3 | 20220111 |
| EPI_ISL_18115490 | NSP3 | hCoV-19/Thailand/NIC_BKK_7015/2023 | E | 1252 | R | 6 | 20230707 |
| EPI_ISL_19760159 | NSP3 | hCoV-19/USA/TX-CDC-LC1133682/2025 | E | 1252 | D | 335 | 20250211 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | E | 1252 | M | 1 | 20200715 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | E | 1252 | H | 1 | 20230217 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 1252 | S | 51 | 20230101 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | E | 1252 | insLL | 1 | 20230217 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | E | 1252 | del | 536 | 20241021 |
| EPI_ISL_19596324 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJXEU/2024 | E | 1252 | V | 90 | 20241118 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | E | 1252 | N | 3 | 20230401 |
| EPI_ISL_12754222 | NSP3 | hCoV-19/USA/MS-MSPHL-314/2021 | E | 1252 | insXX | 1 | 20210818 |
| EPI_ISL_17466166 | NSP3 | hCoV-19/India/CT-AIIMSR-VRDL-INSACOG-1165/2023 | E | 1252 | stop | 315 | 20230404 |
| EPI_ISL_19805250 | NSP3 | hCoV-19/Russia/SPE-RII-MH229769S/2025 | E | 1252 | K | 1766 | 20250318 |
| EPI_ISL_18400502 | NSP3 | hCoV-19/USA/IL-RIPHL_122035_G/2023 | E | 1252 | Q | 33 | 20230822 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 1252 | F | 1 | 20210318 |
| EPI_ISL_3464682 | NSP3 | hCoV-19/USA/ID-IBL-637563/2020 | E | 1252 | P | 1 | 20200729 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | E | 1252 | T | 6 | 20230217 |
| EPI_ISL_19622192 | NSP3 | hCoV-19/USA/RI-RISHL-2067/2024 | V | 1253 | A | 318 | 20241004 |
| EPI_ISL_14795095 | NSP3 | hCoV-19/Mongolia/UB-270301/2022 | V | 1253 | insHLR | 1 | 20220617 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | V | 1253 | T | 6 | 20230123 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | V | 1253 | Y | 2 | 20210326 |
| EPI_ISL_17080908 | NSP3 | hCoV-19/Poland/WSSEL-227/2023 | V | 1253 | S | 3 | 20230215 |
| EPI_ISL_19494319 | NSP3 | hCoV-19/Belgium/Sciensano-LS-S6888/2024 | V | 1253 | G | 54 | 20240926 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | V | 1253 | insH | 1 | 20220117 |
| EPI_ISL_15260369 | NSP3 | hCoV-19/USA/PA-CDC-STM-6F6ZYGGAU/2022 | V | 1253 | insILG | 1 | 20220921 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 1253 | Q | 1 | 20220812 |
| EPI_ISL_4533968 | NSP3 | hCoV-19/India/GJ-INSACOG-GBRC2226/2021 | V | 1253 | D | 4 | 20210831 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | V | 1253 | insRRHTstop | 1 | 20210803 |
| EPI_ISL_19557379 | NSP3 | hCoV-19/France/GES-RELAB-IPP12384/2024 | V | 1253 | del | 533 | 20241021 |
| EPI_ISL_17425901 | NSP3 | hCoV-19/India/MH-CSIR-2899/2023 | V | 1253 | E | 6 | 20230401 |
| EPI_ISL_12697339 | NSP3 | hCoV-19/USA/CA-CDPH-3000345100/2022 | V | 1253 | insQEG | 1 | 20220330 |
| EPI_ISL_19738517 | NSP3 | hCoV-19/Chile/NB-6758/2025 | V | 1253 | F | 3055 | 20250120 |
| EPI_ISL_4530175 | NSP3 | hCoV-19/England/PHEC-3G072G79/2021 | V | 1253 | R | 1 | 20210919 |
| EPI_ISL_15231858 | NSP3 | hCoV-19/Singapore/12179/2022 | V | 1253 | insMSRIG | 1 | 20220919 |
| EPI_ISL_7509709 | NSP3 | hCoV-19/USA/CA-CSMC599/2020 | V | 1253 | insMF | 1 | 20201023 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | V | 1253 | K | 1 | 20221012 |
| EPI_ISL_11415655 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC21LAMS/2022 | V | 1253 | P | 15 | 20220201 |
| EPI_ISL_17715981 | NSP3 | hCoV-19/Chile/RM-36617/2023 | V | 1253 | L | 44 | 20230503 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | V | 1253 | N | 3 | 20220207 |
| EPI_ISL_19825042 | NSP3 | hCoV-19/USA/CA-PFZ04973/2025 | V | 1253 | insSGC | 2 | 20250326 |
| EPI_ISL_19657238 | NSP3 | hCoV-19/USA/NY-CDC-LC1127133/2024 | V | 1253 | I | 627 | 20241220 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | V | 1253 | C | 4 | 20230217 |
| EPI_ISL_19536897 | NSP3 | hCoV-19/Turkey/DEU-S10/2021 | V | 1254 | insGDIIHNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVV | 1 | 20210420 |
| EPI_ISL_17658710 | NSP3 | hCoV-19/Italy/LOM-ASST-69365879/2023 | V | 1254 | G | 16 | 20230509 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | V | 1254 | T | 21 | 20230624 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1254 | M | 48 | 20230101 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | V | 1254 | del | 508 | 20240715 |
| EPI_ISL_19831711 | NSP3 | hCoV-19/Luxembourg/LNS1434608/2025 | V | 1254 | A | 53 | 20250217 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | V | 1254 | S | 1 | 20230217 |
| EPI_ISL_19788407 | NSP3 | hCoV-19/South Korea/KDCA297130/2025 | V | 1254 | I | 787 | 20250226 |
| EPI_ISL_19735491 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56310/2025 | V | 1254 | L | 259 | 20250203 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | V | 1254 | D | 1 | 20220207 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | V | 1254 | N | 1 | 20210521 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | V | 1254 | C | 1 | 20210809 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | V | 1254 | Q | 4 | 20220227 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | V | 1254 | insCLN | 1 | 20200729 |
| EPI_ISL_11887753 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0716/2021 | V | 1254 | F | 2 | 20211229 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1254 | P | 2 | 20230108 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | V | 1254 | stop | 27 | 20230401 |
| EPI_ISL_11355421 | NSP3 | hCoV-19/France/GES-ChNa-210059857801/2021 | V | 1254 | E | 7 | 20210719 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | V | 1254 | R | 3 | 20220718 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | V | 1254 | H | 5 | 20230123 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | V | 1254 | K | 4 | 20230401 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | V | 1254 | insR | 1 | 20200715 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 1255 | stop | 52 | 20230101 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | G | 1255 | del | 545 | 20240715 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | G | 1255 | P | 1 | 20210326 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | G | 1255 | Q | 3 | 20210805 |
| EPI_ISL_17652513 | NSP3 | hCoV-19/Spain/GA-CHUVI-35302830/2023 | G | 1255 | K | 4 | 20230403 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | G | 1255 | N | 2 | 20230401 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | G | 1255 | L | 6 | 20230217 |
| EPI_ISL_19777251 | NSP3 | hCoV-19/Estonia/TLCD-34586/2024 | G | 1255 | E | 249 | 20241009 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | G | 1255 | insYFF | 1 | 20210326 |
| EPI_ISL_19802278 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10969/2025 | G | 1255 | V | 332 | 20250314 |
| EPI_ISL_14588235 | NSP3 | hCoV-19/USA/ID-IBL-843816/2022 | G | 1255 | insRAEstop | 1 | 20220718 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1255 | T | 2 | 20220210 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | G | 1255 | A | 4 | 20221012 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | G | 1255 | C | 2 | 20220305 |
| EPI_ISL_13306921 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3834/2022 | G | 1255 | I | 2 | 20220506 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | G | 1255 | insR | 1 | 20210816 |
| EPI_ISL_17275307 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45832/2023 | G | 1255 | S | 2 | 20230217 |
| EPI_ISL_12451985 | NSP3 | hCoV-19/Luxembourg/LNS0860939/2022 | G | 1255 | insXXXXXXXXXXXX | 2 | 20220314 |
| EPI_ISL_19795439 | NSP3 | hCoV-19/Brazil/SP-LEIAL4589/2025 | G | 1255 | R | 687 | 20250211 |
| EPI_ISL_4530175 | NSP3 | hCoV-19/England/PHEC-3G072G79/2021 | G | 1255 | Y | 1 | 20210919 |
| EPI_ISL_3941723 | NSP3 | hCoV-19/USA/KS-KSU-2672/2021 | D | 1256 | F | 1 | 20210817 |
| EPI_ISL_19747971 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00021857_01/2024 | D | 1256 | E | 59 | 20240820 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | D | 1256 | del | 496 | 20240715 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | D | 1256 | T | 30 | 20230401 |
| EPI_ISL_19642137 | NSP3 | hCoV-19/USA/CA-PFZ01288/2024 | D | 1256 | A | 17 | 20240904 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | D | 1256 | insI | 1 | 20211222 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | D | 1256 | R | 3 | 20220205 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 1256 | K | 51 | 20230101 |
| EPI_ISL_19770381 | NSP3 | hCoV-19/Spain/AS-HUCA-232514718/2025 | D | 1256 | Y | 370 | 20250219 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | D | 1256 | Q | 2 | 20210424 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | D | 1256 | stop | 1 | 20210521 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | D | 1256 | I | 2 | 20230217 |
| EPI_ISL_19450934 | NSP3 | hCoV-19/Singapore/R27MQ33/2024 | D | 1256 | B | 30 | 20240510 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 1256 | V | 1 | 20230108 |
| EPI_ISL_16976830 | NSP3 | hCoV-19/Austria/LB-R00125-S052/2023 | D | 1256 | H | 6 | 20230213 |
| EPI_ISL_19782517 | NSP3 | hCoV-19/USA/OR-UM-G25Y15H1/2025 | D | 1256 | N | 610 | 20250126 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | D | 1256 | L | 1 | 20220305 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | D | 1256 | S | 3 | 20230217 |
| EPI_ISL_19829197 | NSP3 | hCoV-19/USA/DE-CDC-LC1136595/2025 | D | 1256 | G | 425 | 20250403 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | I | 1257 | A | 2 | 20220207 |
| EPI_ISL_19818374 | NSP3 | hCoV-19/France/IDF-RELAB-IPP03660/2025 | I | 1257 | V | 763 | 20250307 |
| EPI_ISL_18545690 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YK1CO/2023 | I | 1257 | J | 5 | 20231111 |
| EPI_ISL_19586708 | NSP3 | hCoV-19/Italy/VEN-IZSVe-24RS8044-5_PD/2024 | I | 1257 | F | 16 | 20241105 |
| EPI_ISL_4530175 | NSP3 | hCoV-19/England/PHEC-3G072G79/2021 | I | 1257 | stop | 2 | 20210919 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | I | 1257 | del | 515 | 20240715 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | I | 1257 | W | 1 | 20210121 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | I | 1257 | E | 1 | 20210915 |
| EPI_ISL_18409096 | NSP3 | hCoV-19/South Korea/KDCA267903/2023 | I | 1257 | L | 171 | 20230918 |
| EPI_ISL_5854760 | NSP3 | hCoV-19/Nigeria/MRL-OS-2079/2021 | I | 1257 | M | 17 | 20210630 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | I | 1257 | H | 2 | 20220205 |
| EPI_ISL_19070459 | NSP3 | hCoV-19/USA/NE-NM_L376118170/2024 | I | 1257 | T | 398 | 20240411 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | I | 1257 | K | 1 | 20210727 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | I | 1257 | P | 1 | 20221018 |
| EPI_ISL_18282423 | NSP3 | hCoV-19/USA/PA-CDC-LC1057824/2023 | I | 1257 | S | 71 | 20230906 |
| EPI_ISL_19299661 | NSP3 | hCoV-19/Denmark/DCGC-687307/2024 | I | 1257 | N | 13 | 20240708 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 1257 | Y | 4 | 20230108 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | I | 1257 | insGNGstopS | 1 | 20210813 |
| EPI_ISL_16397652 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-121133/2022 | I | 1258 | J | 3 | 20221224 |
| EPI_ISL_16447640 | NSP3 | hCoV-19/Italy/LOM-ASST-69257696/2023 | I | 1258 | R | 20 | 20230103 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | I | 1258 | A | 2 | 20220207 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | I | 1258 | del | 147 | 20240715 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | I | 1258 | Q | 1 | 20201214 |
| EPI_ISL_18287761 | NSP3 | hCoV-19/France/IDF-AphpSA-882308018551/2023 | I | 1258 | L | 30 | 20230805 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | I | 1258 | stop | 2 | 20210803 |
| EPI_ISL_17774102 | NSP3 | hCoV-19/Costa Rica/INC-11228-793136/2023 | I | 1258 | K | 14 | 20230511 |
| EPI_ISL_19709226 | NSP3 | hCoV-19/Japan/TKYnat18305/2025 | I | 1258 | T | 2314 | 20250113 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | I | 1258 | C | 2 | 20210813 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | I | 1258 | F | 2 | 20210917 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | I | 1258 | G | 2 | 20220305 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1258 | S | 1 | 20210318 |
| EPI_ISL_16118665 | NSP3 | hCoV-19/USA/CA-CDPH-1002008056/2021 | I | 1258 | N | 11 | 20210810 |
| EPI_ISL_19685818 | NSP3 | hCoV-19/Ireland/D-SVUH-FAZ12591-058/2025 | I | 1258 | M | 151 | 20250113 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | I | 1258 | insGY | 1 | 20210424 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | I | 1258 | Y | 33 | 20230401 |
| EPI_ISL_19806955 | NSP3 | hCoV-19/Spain/CL-UCHV-50010/2025 | I | 1258 | V | 714 | 20250227 |
| EPI_ISL_19805283 | NSP3 | hCoV-19/USA/CA-CDPH-500146418/2025 | L | 1259 | P | 115 | 20250213 |
| EPI_ISL_2597710 | NSP3 | hCoV-19/USA/AZ-ASPHL-1407/2021 | L | 1259 | insFS | 3 | 20210411 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 1259 | V | 20 | 20230108 |
| EPI_ISL_18340044 | NSP3 | hCoV-19/USA/NY-CDC-LC1062262/2023 | L | 1259 | J | 39 | 20230920 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1259 | N | 1 | 20210318 |
| EPI_ISL_2445044 | NSP3 | hCoV-19/USA/AZ-ASPHL-4023/2021 | L | 1259 | insHGT | 2 | 20210521 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | L | 1259 | M | 1 | 20220207 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | L | 1259 | del | 152 | 20240715 |
| EPI_ISL_18651984 | NSP3 | hCoV-19/Italy/VEN-ULSS8-2443342_VI/2023 | L | 1259 | H | 27 | 20231212 |
| EPI_ISL_5817891 | NSP3 | hCoV-19/Wales/PHWC-PRTKAR/2021 | L | 1259 | S | 2 | 20211014 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | L | 1259 | insQLCTFT | 1 | 20210326 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | L | 1259 | stop | 2 | 20210812 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | L | 1259 | K | 2 | 20221018 |
| EPI_ISL_14063748 | NSP3 | hCoV-19/Bahrain/22020120379/2022 | L | 1259 | insKRVT | 1 | 20220224 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | L | 1259 | T | 4 | 20220205 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | L | 1259 | A | 1 | 20220305 |
| EPI_ISL_2650038 | NSP3 | hCoV-19/USA/AZ-ASPHL-1304/2020 | L | 1259 | insNGEKQNALSLRstop | 1 | 20200621 |
| EPI_ISL_19824381 | NSP3 | hCoV-19/Mexico/CMX-INER-INMEGEN-3211/2025 | L | 1259 | F | 1082 | 20250324 |
| EPI_ISL_19832942 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022775_01/2025 | L | 1259 | R | 43 | 20250306 |
| EPI_ISL_19515582 | NSP3 | hCoV-19/New Zealand/24YA7083/2024 | L | 1259 | I | 232 | 20241008 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | L | 1259 | Y | 5 | 20230401 |
| EPI_ISL_19360027 | NSP3 | hCoV-19/USA/NY-NYULH-20579/2024 | K | 1260 | T | 16 | 20240817 |
| EPI_ISL_18287761 | NSP3 | hCoV-19/France/IDF-AphpSA-882308018551/2023 | K | 1260 | F | 17 | 20230805 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1260 | H | 1 | 20210318 |
| EPI_ISL_2394877 | NSP3 | hCoV-19/England/MILK-15C83F4/2021 | K | 1260 | insXXXX | 1 | 20210527 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | K | 1260 | L | 6 | 20230123 |
| EPI_ISL_17258928 | NSP3 | hCoV-19/Sweden/03_SE600_000200507796N2/2022 | K | 1260 | stop | 8 | 20221216 |
| EPI_ISL_19479181 | NSP3 | hCoV-19/USA/OH-CDC-LC1123778/2024 | K | 1260 | R | 325 | 20240928 |
| EPI_ISL_16531481 | NSP3 | hCoV-19/Canada/ON-PHL-23-03257/2023 | K | 1260 | insSS | 1 | 20230106 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | K | 1260 | del | 162 | 20240715 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1260 | V | 2 | 20220210 |
| EPI_ISL_11394668 | NSP3 | hCoV-19/Brazil/CE-ITV-178833/2021 | K | 1260 | D | 1 | 20210316 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | K | 1260 | Q | 2 | 20220117 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | K | 1260 | S | 5 | 20210917 |
| EPI_ISL_19806955 | NSP3 | hCoV-19/Spain/CL-UCHV-50010/2025 | K | 1260 | E | 1131 | 20250227 |
| EPI_ISL_10388027 | NSP3 | hCoV-19/England/DHSC-CYY78I8/2022 | K | 1260 | insL | 5 | 20220203 |
| EPI_ISL_18746037 | NSP3 | hCoV-19/Greece/PHL_KEDY-15127/2023 | K | 1260 | N | 43 | 20231116 |
| EPI_ISL_9818971 | NSP3 | hCoV-19/England/ALDP-35A347E/2022 | K | 1260 | insRTP | 6 | 20220204 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | K | 1260 | P | 2 | 20210806 |
| EPI_ISL_18147062 | NSP3 | hCoV-19/Hong Kong/CUHK-NC10399/2022 | K | 1260 | I | 87 | 20220129 |
| EPI_ISL_4530175 | NSP3 | hCoV-19/England/PHEC-3G072G79/2021 | P | 1261 | stop | 1 | 20210919 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | P | 1261 | H | 7 | 20220305 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | P | 1261 | A | 13 | 20230123 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | P | 1261 | K | 4 | 20210806 |
| EPI_ISL_17301932 | NSP3 | hCoV-19/Germany/MV-UMG-18806965/2021 | P | 1261 | insPY | 1 | 20210430 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | P | 1261 | insNT | 1 | 20220108 |
| EPI_ISL_19823081 | NSP3 | hCoV-19/Gansu/PLCDC-0018/2025 | P | 1261 | S | 9139 | 20250312 |
| EPI_ISL_18287761 | NSP3 | hCoV-19/France/IDF-AphpSA-882308018551/2023 | P | 1261 | G | 17 | 20230805 |
| EPI_ISL_19826038 | NSP3 | hCoV-19/Singapore/Y25R15MSC122/2025 | P | 1261 | Q | 4833 | 20250408 |
| EPI_ISL_12447899 | NSP3 | hCoV-19/Luxembourg/LNS0200616/2022 | P | 1261 | insXXEVV | 1 | 20220314 |
| EPI_ISL_12451985 | NSP3 | hCoV-19/Luxembourg/LNS0860939/2022 | P | 1261 | V | 4 | 20220314 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | P | 1261 | N | 1 | 20210803 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | P | 1261 | Y | 1 | 20210915 |
| EPI_ISL_4535841 | NSP3 | hCoV-19/USA/WI-CDC-ASC210174241/2021 | P | 1261 | insKNPS | 1 | 20210827 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | P | 1261 | D | 1 | 20220207 |
| EPI_ISL_17199128 | NSP3 | hCoV-19/Japan/SUPCRC-4961/2023 | P | 1261 | insQEAM | 37 | 20230207 |
| EPI_ISL_19467395 | NSP3 | hCoV-19/USA/TX-PHH-CS-04175/2024 | P | 1261 | T | 277 | 20240821 |
| EPI_ISL_19810988 | NSP3 | hCoV-19/USA/VA-GBW-GKISBBBE03879/2025 | P | 1261 | L | 3162 | 20250323 |
| EPI_ISL_18303162 | NSP3 | hCoV-19/USA/TX-PHH-23V-229G0224/2023 | P | 1261 | R | 74 | 20230817 |
| EPI_ISL_11355421 | NSP3 | hCoV-19/France/GES-ChNa-210059857801/2021 | P | 1261 | insstopstop | 1 | 20210719 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | P | 1261 | del | 80 | 20240715 |
| EPI_ISL_5316789 | NSP3 | hCoV-19/Czech Republic/CSQ1492/2021 | P | 1261 | insTRTDS | 1 | 20211004 |
| EPI_ISL_16584964 | NSP3 | hCoV-19/Australia/NSW-ICPMR-41239/2023 | P | 1261 | insSS | 111 | 20230111 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | P | 1261 | C | 1 | 20210114 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | A | 1262 | insstopstopF | 1 | 20210812 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | A | 1262 | del | 185 | 20240715 |
| EPI_ISL_10121664 | NSP3 | hCoV-19/Turkey/HSGM-G57/2022 | A | 1262 | D | 54 | 20220124 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | A | 1262 | Q | 22 | 20230401 |
| EPI_ISL_19821873 | NSP3 | hCoV-19/USA/AL-CDC-LC1136375/2025 | A | 1262 | V | 3760 | 20250326 |
| EPI_ISL_17182884 | NSP3 | hCoV-19/Georgia/Tb-s7399/2022 | A | 1262 | insN | 5 | 20221011 |
| EPI_ISL_18287761 | NSP3 | hCoV-19/France/IDF-AphpSA-882308018551/2023 | A | 1262 | M | 17 | 20230805 |
| EPI_ISL_11142117 | NSP3 | hCoV-19/USA/UT-UPHL-220213708904/2022 | A | 1262 | insKGER | 4 | 20220204 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | A | 1262 | I | 1 | 20220105 |
| EPI_ISL_11355421 | NSP3 | hCoV-19/France/GES-ChNa-210059857801/2021 | A | 1262 | F | 1 | 20210719 |
| EPI_ISL_9356233 | NSP3 | hCoV-19/USA/NC-UNC-R220180/2022 | A | 1262 | K | 5 | 20220104 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | A | 1262 | C | 21 | 20230624 |
| EPI_ISL_18633760 | NSP3 | hCoV-19/USA/ND-CDC-2-7370832/2023 | A | 1262 | P | 51 | 20230913 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | A | 1262 | L | 6 | 20220108 |
| EPI_ISL_19635497 | NSP3 | hCoV-19/USA/CO-CDPHE-42590565/2024 | A | 1262 | E | 105 | 20241209 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | A | 1262 | R | 1 | 20210114 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | A | 1262 | insKIstop | 1 | 20210121 |
| EPI_ISL_19537531 | NSP3 | hCoV-19/Sweden/H-24-073178/2024 | A | 1262 | S | 576 | 20241016 |
| EPI_ISL_19828117 | NSP3 | hCoV-19/Australia/QLD0x0154B9/2025 | A | 1262 | T | 1104 | 20250329 |
| EPI_ISL_16599796 | NSP3 | hCoV-19/USA/TX-HMH-123115/2023 | A | 1262 | stop | 2 | 20230110 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | A | 1262 | Y | 1 | 20210803 |
| EPI_ISL_15389062 | NSP3 | hCoV-19/Morocco/FMP435/2021 | A | 1262 | G | 7 | 20211227 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1263 | Q | 4 | 20230108 |
| EPI_ISL_19180483 | NSP3 | hCoV-19/Singapore/R25MQ100/2024 | N | 1263 | B | 3 | 20240502 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1263 | L | 1 | 20220210 |
| EPI_ISL_19465625 | NSP3 | hCoV-19/Canada/QC-L00794244001/2024 | N | 1263 | T | 97 | 20240930 |
| EPI_ISL_19829073 | NSP3 | hCoV-19/USA/VA-CDC-LC1136690/2025 | N | 1263 | del | 3305 | 20250331 |
| EPI_ISL_19803382 | NSP3 | hCoV-19/France/ARA-HCL025036150801/2025 | N | 1263 | D | 175 | 20250228 |
| EPI_ISL_19505840 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YMRXB/2024 | N | 1263 | Y | 9 | 20241014 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | N | 1263 | I | 55 | 20230401 |
| EPI_ISL_10388027 | NSP3 | hCoV-19/England/DHSC-CYY78I8/2022 | N | 1263 | insSSA | 5 | 20220203 |
| EPI_ISL_9818971 | NSP3 | hCoV-19/England/ALDP-35A347E/2022 | N | 1263 | A | 7 | 20220204 |
| EPI_ISL_19594781 | NSP3 | hCoV-19/Yunnan/YNCDC-1614/2024 | N | 1263 | K | 240 | 20240627 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | N | 1263 | V | 5 | 20230123 |
| EPI_ISL_18287761 | NSP3 | hCoV-19/France/IDF-AphpSA-882308018551/2023 | N | 1263 | F | 17 | 20230805 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | N | 1263 | stop | 6 | 20210917 |
| EPI_ISL_18923683 | NSP3 | hCoV-19/New Zealand/24YA1262/2024 | N | 1263 | H | 76 | 20240128 |
| EPI_ISL_19768710 | NSP3 | hCoV-19/USA/DC-DFS-PHL-11484/2025 | N | 1263 | S | 353 | 20250217 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | N | 1263 | R | 7 | 20230401 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | N | 1263 | E | 2 | 20220227 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | N | 1264 | R | 6 | 20230401 |
| EPI_ISL_19192471 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1483/2024 | N | 1264 | insN | 2 | 20240418 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | N | 1264 | insYML | 17 | 20230624 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | N | 1264 | C | 3 | 20220227 |
| EPI_ISL_19670554 | NSP3 | hCoV-19/USA/IL-RIPHL_123711_G/2024 | N | 1264 | del | 1096 | 20241228 |
| EPI_ISL_19228159 | NSP3 | hCoV-19/Singapore/R37MQ114/2024 | N | 1264 | B | 5 | 20240603 |
| EPI_ISL_19267755 | NSP3 | hCoV-19/Spain/AN-PMC-40851/2024 | N | 1264 | I | 130 | 20240514 |
| EPI_ISL_19823202 | NSP3 | hCoV-19/USA/IA-SHL-2609493/2025 | N | 1264 | T | 81 | 20250401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1264 | E | 2 | 20220210 |
| EPI_ISL_19741489 | NSP3 | hCoV-19/USA/CA-PFZ04239/2025 | N | 1264 | S | 217 | 20250206 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | N | 1264 | G | 3 | 20220207 |
| EPI_ISL_19786444 | NSP3 | hCoV-19/USA/UT-UPHL-250307865779/2025 | N | 1264 | D | 185 | 20250227 |
| EPI_ISL_10829523 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84170/2022 | N | 1264 | Q | 7 | 20220120 |
| EPI_ISL_19667465 | NSP3 | hCoV-19/Japan/FR032-0270/2024 | N | 1264 | K | 64 | 20241117 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | N | 1264 | stop | 6 | 20220623 |
| EPI_ISL_17301932 | NSP3 | hCoV-19/Germany/MV-UMG-18806965/2021 | N | 1264 | A | 2 | 20210430 |
| EPI_ISL_11613483 | NSP3 | hCoV-19/Germany/BW-RKI-I-655512/2022 | N | 1264 | H | 3 | 20220314 |
| EPI_ISL_19381321 | NSP3 | hCoV-19/Spain/AR-HUMS-02824054/2024 | N | 1264 | Y | 8 | 20240102 |
| EPI_ISL_10182151 | NSP3 | hCoV-19/Turkey/CTF_19012022_418/2022 | S | 1265 | Y | 6 | 20220119 |
| EPI_ISL_8803740 | NSP3 | hCoV-19/India/MH-NCCS-2750000377216/2021 | S | 1265 | F | 4 | 20210731 |
| EPI_ISL_14032170 | NSP3 | hCoV-19/France/CVL-IPP44389/2022 | S | 1265 | C | 6 | 20220704 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | S | 1265 | A | 2 | 20220117 |
| EPI_ISL_15389062 | NSP3 | hCoV-19/Morocco/FMP435/2021 | S | 1265 | stop | 2 | 20211227 |
| EPI_ISL_11074398 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-02901/2022 | S | 1265 | M | 3 | 20220206 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | S | 1265 | insTstopTSKstopstop | 1 | 20210114 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | S | 1265 | H | 4 | 20230401 |
| EPI_ISL_18438403 | NSP3 | hCoV-19/Hubei/HCDC-SY3272/2023 | S | 1265 | R | 245 | 20231011 |
| EPI_ISL_10093109 | NSP3 | hCoV-19/USA/UT-UPHL-220216297342/2022 | S | 1265 | E | 2 | 20220202 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | S | 1265 | del | 1496403 | 20250329 |
| EPI_ISL_19714521 | NSP3 | hCoV-19/Russia/MOS-RII-MH219634S/2024 | S | 1265 | T | 202 | 20241202 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | S | 1265 | L | 2 | 20220104 |
| EPI_ISL_19328307 | NSP3 | hCoV-19/Italy/VEN-AOUIVR-7411759801_VR/2024 | S | 1265 | G | 123 | 20240708 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1265 | Q | 10 | 20230108 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | S | 1265 | insKstop | 1 | 20200715 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | S | 1265 | V | 18 | 20230401 |
| EPI_ISL_19724902 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015662/2024 | S | 1265 | N | 49076 | 20241202 |
| EPI_ISL_10093109 | NSP3 | hCoV-19/USA/UT-UPHL-220216297342/2022 | S | 1265 | insRXXX | 1 | 20220202 |
| EPI_ISL_19769292 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422246101/2025 | S | 1265 | I | 2433 | 20250130 |
| EPI_ISL_13014245 | NSP3 | hCoV-19/Germany/BW-RKI-I-832456/2022 | S | 1265 | K | 22 | 20220519 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | L | 1266 | I | 1544206 | 20250329 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | L | 1266 | H | 1 | 20210118 |
| EPI_ISL_19507701 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10133555/2024 | L | 1266 | V | 137 | 20241013 |
| EPI_ISL_17781687 | NSP3 | hCoV-19/France/PAC-HCL-023087310501/2023 | L | 1266 | C | 2 | 20230522 |
| EPI_ISL_18980185 | NSP3 | hCoV-19/Spain/GA-CHUAC-12102/2024 | L | 1266 | Q | 14 | 20240304 |
| EPI_ISL_19750353 | NSP3 | hCoV-19/Canada/QC-L00842846001/2025 | L | 1266 | F | 1201 | 20250209 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | L | 1266 | insAT | 1 | 20200729 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | L | 1266 | T | 1 | 20221018 |
| EPI_ISL_10829523 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84170/2022 | L | 1266 | insIstop | 1 | 20220120 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | L | 1266 | stop | 92 | 20230401 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | L | 1266 | R | 1 | 20210812 |
| EPI_ISL_12539959 | NSP3 | hCoV-19/Norway/14846/2022 | L | 1266 | M | 10 | 20220307 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | L | 1266 | insstop | 3 | 20210813 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1266 | Y | 27 | 20230624 |
| EPI_ISL_14252638 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-210722-MM00302R/2022 | L | 1266 | insLI | 1 | 20220721 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1266 | P | 2 | 20220210 |
| EPI_ISL_19539567 | NSP3 | hCoV-19/Turkey/DEU-S45/2020 | L | 1266 | insACEDLK | 1 | 20200821 |
| EPI_ISL_10858427 | NSP3 | hCoV-19/Turkey/HSGM-G2233/2022 | L | 1266 | K | 6 | 20220217 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | L | 1266 | W | 1 | 20220131 |
| EPI_ISL_19564849 | NSP3 | hCoV-19/England/CLIMB-CM7YKYSY/2024 | L | 1266 | del | 978 | 20241117 |
| EPI_ISL_12771216 | NSP3 | hCoV-19/Malaysia/UiTM1779/2022 | L | 1266 | J | 31 | 20220311 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | L | 1266 | E | 2 | 20220207 |
| EPI_ISL_19808359 | NSP3 | hCoV-19/Canada/ON-PHL-202504717/2025 | L | 1266 | S | 72 | 20250306 |
| EPI_ISL_19132073 | NSP3 | hCoV-19/Liaoning/LNCDC-179-2/2024 | K | 1267 | E | 113 | 20240415 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | K | 1267 | L | 3 | 20220131 |
| EPI_ISL_16196909 | NSP3 | hCoV-19/Spain/AN-CBA-21755/2022 | K | 1267 | V | 2 | 20220301 |
| EPI_ISL_19705633 | NSP3 | hCoV-19/USA/CO-CDPHE-42867764/2025 | K | 1267 | del | 987 | 20250121 |
| EPI_ISL_17252656 | NSP3 | hCoV-19/New Zealand/23XA1414/2023 | K | 1267 | I | 10 | 20230227 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1267 | D | 2 | 20210318 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | K | 1267 | A | 1 | 20210803 |
| EPI_ISL_18648274 | NSP3 | hCoV-19/Brazil/MS-FIOCRUZ-12930/2023 | K | 1267 | N | 70 | 20231119 |
| EPI_ISL_18920905 | NSP3 | hCoV-19/USA/NY-CDC-QDX92231537/2024 | K | 1267 | T | 92 | 20240202 |
| EPI_ISL_8812991 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111821-1258/2021 | K | 1267 | insN | 1 | 20211118 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | K | 1267 | M | 1 | 20221226 |
| EPI_ISL_19823485 | NSP3 | hCoV-19/Italy/LAZ-IFO-2504013021/2025 | K | 1267 | Q | 50 | 20250304 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | K | 1267 | P | 6 | 20230123 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | K | 1267 | H | 1 | 20210118 |
| EPI_ISL_13366918 | NSP3 | hCoV-19/USA/TX-HMH-100179/2022 | K | 1267 | stop | 2 | 20220607 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 1267 | insHQIRLMYstopSQN | 1 | 20230108 |
| EPI_ISL_15389062 | NSP3 | hCoV-19/Morocco/FMP435/2021 | K | 1267 | C | 1 | 20211227 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | K | 1267 | Y | 1 | 20210726 |
| EPI_ISL_19738466 | NSP3 | hCoV-19/Chile/ML-7450/2025 | K | 1267 | R | 205 | 20250121 |
| EPI_ISL_19633197 | NSP3 | hCoV-19/France/GES-RELAB-IPP13670/2024 | I | 1268 | V | 762 | 20241126 |
| EPI_ISL_19825358 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-04D-MM00063R/2025 | I | 1268 | N | 619 | 20250404 |
| EPI_ISL_19675808 | NSP3 | hCoV-19/Canada/ON-PHL-202501448/2025 | I | 1268 | T | 337 | 20250109 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | I | 1268 | K | 20 | 20230624 |
| EPI_ISL_565914 | NSP3 | hCoV-19/Spain/AN-IBV-98001999/2020 | I | 1268 | J | 1 | 20200316 |
| EPI_ISL_11946352 | NSP3 | hCoV-19/England/DHSC-CYNGSDK/2021 | I | 1268 | insFGGPSDS | 1 | 20211225 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | I | 1268 | insstopK | 1 | 20210915 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | I | 1268 | A | 2 | 20210326 |
| EPI_ISL_9391151 | NSP3 | hCoV-19/USA/NC-UNC-R220183/2022 | I | 1268 | Y | 7 | 20220104 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | I | 1268 | C | 2 | 20220305 |
| EPI_ISL_3278299 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS03516/2021 | I | 1268 | M | 2 | 20210506 |
| EPI_ISL_19768652 | NSP3 | hCoV-19/USA/DC-DFS-PHL-11426/2025 | I | 1268 | L | 232 | 20250201 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | I | 1268 | G | 1 | 20210812 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | I | 1268 | stop | 4 | 20230401 |
| EPI_ISL_18100297 | NSP3 | hCoV-19/Australia/TAS005775/2023 | I | 1268 | F | 20 | 20230601 |
| EPI_ISL_19705633 | NSP3 | hCoV-19/USA/CO-CDPHE-42867764/2025 | I | 1268 | del | 926 | 20250121 |
| EPI_ISL_18736346 | NSP3 | hCoV-19/Russia/ME-RII-MH154568S/2023 | I | 1268 | S | 32 | 20231115 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | T | 1269 | insTV | 1 | 20210326 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | T | 1269 | L | 3 | 20220104 |
| EPI_ISL_14786939 | NSP3 | hCoV-19/Wales/PHWC-PKDMYM/2022 | T | 1269 | G | 2 | 20220811 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | T | 1269 | V | 19 | 20230624 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | T | 1269 | M | 2 | 20220131 |
| EPI_ISL_19360942 | NSP3 | hCoV-19/USA/UT-UPHL-240823703162/2024 | T | 1269 | Q | 113 | 20240807 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | T | 1269 | W | 1 | 20210812 |
| EPI_ISL_11815461 | NSP3 | hCoV-19/USA/AZ-ASU58626/2022 | T | 1269 | E | 1 | 20220112 |
| EPI_ISL_19272861 | NSP3 | hCoV-19/Canada/QC-L00756248001/2024 | T | 1269 | insAVRL | 1 | 20240701 |
| EPI_ISL_3421947 | NSP3 | hCoV-19/England/OXON-FA9CD9/2021 | T | 1269 | C | 1 | 20210713 |
| EPI_ISL_18738805 | NSP3 | hCoV-19/USA/CO-CDPHE-41578884/2023 | T | 1269 | P | 8 | 20231202 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | T | 1269 | Y | 2 | 20210816 |
| EPI_ISL_19359024 | NSP3 | hCoV-19/Canada/NS-NSH-725927/2024 | T | 1269 | R | 20 | 20240725 |
| EPI_ISL_10651102 | NSP3 | hCoV-19/USA/NY-NYULH5946/2022 | T | 1269 | insXXXX | 1 | 20220215 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | T | 1269 | D | 1 | 20220305 |
| EPI_ISL_6615702 | NSP3 | hCoV-19/England/BRBR-2ABC2B2/2021 | T | 1269 | insVQN | 1 | 20211115 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | T | 1269 | H | 1 | 20221018 |
| EPI_ISL_19297191 | NSP3 | hCoV-19/Spain/CT-HUVH-E82874/2024 | T | 1269 | S | 142 | 20240711 |
| EPI_ISL_19692676 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09795/2025 | T | 1269 | del | 342 | 20250106 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | T | 1269 | N | 2 | 20210803 |
| EPI_ISL_19807205 | NSP3 | hCoV-19/Canada/ON-KHS-202500751-v1/2025 | T | 1269 | A | 153 | 20250302 |
| EPI_ISL_19824763 | NSP3 | hCoV-19/France/ARA-RELAB-HCL725000041901/2025 | T | 1269 | I | 16204 | 20250321 |
| EPI_ISL_18781609 | NSP3 | hCoV-19/Japan/PG-588406/2023 | T | 1269 | K | 35 | 20231228 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1269 | stop | 52 | 20230101 |
| EPI_ISL_17194272 | NSP3 | hCoV-19/France/PAC-HCL-723000301501/2023 | E | 1270 | V | 6 | 20230227 |
| EPI_ISL_19788846 | NSP3 | hCoV-19/Wales/CLIMB-CM7YKKFQ/2025 | E | 1270 | D | 292 | 20250304 |
| EPI_ISL_15775997 | NSP3 | hCoV-19/Denmark/DCGC-609335/2022 | E | 1270 | Z | 4 | 20221108 |
| EPI_ISL_19658238 | NSP3 | hCoV-19/USA/CO-CDPHE-42686859/2024 | E | 1270 | del | 130 | 20241222 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | E | 1270 | F | 2 | 20210424 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | E | 1270 | I | 5 | 20220305 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | E | 1270 | W | 3 | 20221012 |
| EPI_ISL_18773485 | NSP3 | hCoV-19/Brazil/RJ-LNN11788/2023 | E | 1270 | insESV | 1 | 20230921 |
| EPI_ISL_11777627 | NSP3 | hCoV-19/India/KA-SLS-15310/2021 | E | 1270 | N | 9 | 20211215 |
| EPI_ISL_19563343 | NSP3 | hCoV-19/Netherlands/FR-RIVM-143827/2024 | E | 1270 | Q | 154 | 20241103 |
| EPI_ISL_19761805 | NSP3 | hCoV-19/Australia/QLD0x0152CC/2025 | E | 1270 | K | 1285 | 20250214 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | E | 1270 | R | 13 | 20221018 |
| EPI_ISL_15078099 | NSP3 | hCoV-19/env/Austria/CeMM33474/2022 | E | 1270 | stop | 10 | 20220830 |
| EPI_ISL_19646644 | NSP3 | hCoV-19/Singapore/Y25R1MSC123/2024 | E | 1270 | G | 1270 | 20241230 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | E | 1270 | S | 4 | 20230401 |
| EPI_ISL_19479886 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA11986-P0/2024 | E | 1270 | A | 208 | 20240920 |
| EPI_ISL_19759815 | NSP3 | hCoV-19/Japan/FR008-0004/2025 | E | 1270 | insVLT | 1 | 20250115 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1270 | T | 7 | 20220210 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | E | 1270 | P | 1 | 20210812 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | E | 1271 | S | 4 | 20221018 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | E | 1271 | I | 4 | 20220207 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | E | 1271 | insstop | 1 | 20220104 |
| EPI_ISL_19756342 | NSP3 | hCoV-19/Russia/SPE-RII-MH222747S/2024 | E | 1271 | V | 129 | 20241211 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | E | 1271 | N | 24 | 20230624 |
| EPI_ISL_17194272 | NSP3 | hCoV-19/France/PAC-HCL-723000301501/2023 | E | 1271 | stop | 12 | 20230227 |
| EPI_ISL_19658238 | NSP3 | hCoV-19/USA/CO-CDPHE-42686859/2024 | E | 1271 | del | 95 | 20241222 |
| EPI_ISL_19185318 | NSP3 | hCoV-19/South Korea/KDCA293251/2024 | E | 1271 | Q | 32 | 20240513 |
| EPI_ISL_15335765 | NSP3 | hCoV-19/USA/NY-MSHSPSP-PV59517/2022 | E | 1271 | insIWW | 1 | 20220514 |
| EPI_ISL_19360942 | NSP3 | hCoV-19/USA/UT-UPHL-240823703162/2024 | E | 1271 | R | 119 | 20240807 |
| EPI_ISL_19784685 | NSP3 | hCoV-19/Japan/FR067-0030/2025 | E | 1271 | G | 608 | 20250305 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | E | 1271 | insWLLMstop | 1 | 20210919 |
| EPI_ISL_19328670 | NSP3 | hCoV-19/USA/NM-NMDOH-021446/2024 | E | 1271 | A | 104 | 20240619 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1271 | L | 6 | 20220210 |
| EPI_ISL_9251764 | NSP3 | hCoV-19/England/NEWC-336A16F/2022 | E | 1271 | Z | 5 | 20220118 |
| EPI_ISL_3421947 | NSP3 | hCoV-19/England/OXON-FA9CD9/2021 | E | 1271 | F | 2 | 20210713 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | E | 1271 | Y | 3 | 20220104 |
| EPI_ISL_19786314 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56573/2025 | E | 1271 | D | 4406 | 20250301 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | E | 1271 | H | 2 | 20221012 |
| EPI_ISL_19721791 | NSP3 | hCoV-19/USA/WI-WSLH-2500218/2025 | E | 1271 | K | 489 | 20250103 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | E | 1271 | P | 1 | 20220305 |
| EPI_ISL_11793559 | NSP3 | hCoV-19/India/KA-SEQ_14459_S320_R1_001/2022 | E | 1271 | insA | 1 | 20220215 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 1271 | T | 48 | 20230101 |
| EPI_ISL_19032568 | NSP3 | hCoV-19/USA/KY-KSPHL-06704/2024 | V | 1272 | G | 7 | 20240228 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | V | 1272 | Q | 4 | 20210815 |
| EPI_ISL_19360942 | NSP3 | hCoV-19/USA/UT-UPHL-240823703162/2024 | V | 1272 | L | 172 | 20240807 |
| EPI_ISL_8002353 | NSP3 | hCoV-19/Pakistan/PPHRL-7/2021 | V | 1272 | R | 5 | 20211207 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | V | 1272 | M | 18 | 20230624 |
| EPI_ISL_11394668 | NSP3 | hCoV-19/Brazil/CE-ITV-178833/2021 | V | 1272 | insTG | 1 | 20210316 |
| EPI_ISL_9512158 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG2440/2021 | V | 1272 | insSY | 1 | 20211229 |
| EPI_ISL_19824808 | NSP3 | hCoV-19/Spain/PV-HUD-62626046/2025 | V | 1272 | F | 952 | 20250401 |
| EPI_ISL_7159751 | NSP3 | hCoV-19/USA/NY-PA-PBRI-CT-1307/2021 | V | 1272 | T | 3 | 20211129 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | V | 1272 | P | 2 | 20220726 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | V | 1272 | Y | 3 | 20230106 |
| EPI_ISL_19499526 | NSP3 | hCoV-19/USA/TX-HMH-M-145987/2024 | V | 1272 | W | 8 | 20240906 |
| EPI_ISL_19824767 | NSP3 | hCoV-19/France/ARA-RELAB-HCL725000040801/2025 | V | 1272 | I | 834 | 20250319 |
| EPI_ISL_19724943 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015717/2025 | V | 1272 | A | 172 | 20250103 |
| EPI_ISL_477215 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0012/2020 | V | 1272 | insGHTCLLYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVstopETGVLEV | 1 | 20200609 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | V | 1272 | stop | 3 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1272 | S | 6 | 20220210 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | V | 1272 | E | 1 | 20210727 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | V | 1272 | N | 3 | 20221018 |
| EPI_ISL_19658238 | NSP3 | hCoV-19/USA/CO-CDPHE-42686859/2024 | V | 1272 | del | 100 | 20241222 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | G | 1273 | T | 20 | 20230624 |
| EPI_ISL_17782687 | NSP3 | hCoV-19/Canada/BC-BCCDC-630862/2023 | G | 1273 | E | 4 | 20230510 |
| EPI_ISL_19816965 | NSP3 | hCoV-19/Norway/4162/2025 | G | 1273 | C | 1633 | 20250309 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | G | 1273 | W | 1 | 20221211 |
| EPI_ISL_19499526 | NSP3 | hCoV-19/USA/TX-HMH-M-145987/2024 | G | 1273 | P | 8 | 20240906 |
| EPI_ISL_19824850 | NSP3 | hCoV-19/Spain/MD-H12O_027/2025 | G | 1273 | S | 35403 | 20250316 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | G | 1273 | insS | 1 | 20220726 |
| EPI_ISL_18510076 | NSP3 | hCoV-19/France/OCC-HCL723001492101/2023 | G | 1273 | N | 9 | 20231030 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | G | 1273 | H | 1 | 20220623 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | G | 1273 | insL | 1 | 20210424 |
| EPI_ISL_12047421 | NSP3 | hCoV-19/USA/CA-CDC-LC0570082/2022 | G | 1273 | R | 4 | 20220330 |
| EPI_ISL_18242785 | NSP3 | hCoV-19/Japan/PG-562353/2023 | G | 1273 | A | 41 | 20230811 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | G | 1273 | K | 5 | 20210727 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | G | 1273 | Y | 4 | 20210813 |
| EPI_ISL_19658238 | NSP3 | hCoV-19/USA/CO-CDPHE-42686859/2024 | G | 1273 | del | 156 | 20241222 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | G | 1273 | L | 1 | 20210416 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | G | 1273 | I | 2 | 20210919 |
| EPI_ISL_16599796 | NSP3 | hCoV-19/USA/TX-HMH-123115/2023 | G | 1273 | insTQIstopXXXXXXX | 1 | 20230110 |
| EPI_ISL_19824638 | NSP3 | hCoV-19/Wales/CLIMB-CM7YJ6DS/2025 | G | 1273 | D | 1324 | 20250328 |
| EPI_ISL_19667720 | NSP3 | hCoV-19/Ireland/LK-UHL-696017/2024 | G | 1273 | V | 502 | 20241227 |
| EPI_ISL_477228 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0026/2020 | G | 1273 | insHTCLLYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEVG | 4 | 20200615 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | G | 1273 | insWP | 1 | 20210915 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | G | 1273 | stop | 6 | 20230401 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | H | 1274 | M | 2 | 20210416 |
| EPI_ISL_11394668 | NSP3 | hCoV-19/Brazil/CE-ITV-178833/2021 | H | 1274 | V | 2 | 20210316 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | H | 1274 | insRSNGCLC | 1 | 20210915 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | H | 1274 | C | 3 | 20210803 |
| EPI_ISL_18548488 | NSP3 | hCoV-19/Canada/ON-PHL-23-41165/2023 | H | 1274 | L | 78 | 20231111 |
| EPI_ISL_18829815 | NSP3 | hCoV-19/USA/IL-RIPHL_122511_G/2023 | H | 1274 | P | 88 | 20231216 |
| EPI_ISL_2903112 | NSP3 | hCoV-19/England/OXON-F88371/2021 | H | 1274 | stop | 4 | 20210623 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | H | 1274 | A | 2 | 20221018 |
| EPI_ISL_19812394 | NSP3 | hCoV-19/Germany/BB-RKI-I-1147956/2025 | H | 1274 | R | 507 | 20250310 |
| EPI_ISL_7159751 | NSP3 | hCoV-19/USA/NY-PA-PBRI-CT-1307/2021 | H | 1274 | S | 2 | 20211129 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | H | 1274 | W | 2 | 20220128 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | H | 1274 | D | 42 | 20240715 |
| EPI_ISL_1178733 | NSP3 | hCoV-19/England/OXON-F67DF2/2021 | H | 1274 | insPSYC | 1 | 20210116 |
| EPI_ISL_19502615 | NSP3 | hCoV-19/Russia/SPE-RII-MH197320S/2024 | H | 1274 | Q | 93 | 20240830 |
| EPI_ISL_19824199 | NSP3 | hCoV-19/USA/IL-RIPHL_15505_G/2025 | H | 1274 | Y | 29797 | 20250326 |
| EPI_ISL_7547079 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082421-1072/2021 | H | 1274 | insstopIstopWLLMstopTIL | 1 | 20210824 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | H | 1274 | F | 5 | 20230401 |
| EPI_ISL_19658238 | NSP3 | hCoV-19/USA/CO-CDPHE-42686859/2024 | H | 1274 | del | 192 | 20241222 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | H | 1274 | K | 2 | 20210326 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | H | 1274 | T | 27 | 20220213 |
| EPI_ISL_19332602 | NSP3 | hCoV-19/Japan/FR064-0080/2024 | H | 1274 | N | 246 | 20240719 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | H | 1274 | E | 5 | 20220104 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1275 | C | 1 | 20201214 |
| EPI_ISL_19828106 | NSP3 | hCoV-19/USA/CA-CDPH-500146500/2025 | T | 1275 | R | 41 | 20250210 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | T | 1275 | insLMstop | 1 | 20220128 |
| EPI_ISL_16815671 | NSP3 | hCoV-19/Poland/WSSEGorzow-23S0035/2023 | T | 1275 | S | 8 | 20230123 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | T | 1275 | stop | 1 | 20210416 |
| EPI_ISL_18831502 | NSP3 | hCoV-19/Pakistan/DUHS-14/2024 | T | 1275 | del | 185 | 20240117 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | T | 1275 | V | 7 | 20221018 |
| EPI_ISL_12292463 | NSP3 | hCoV-19/USA/CA-CDPH-2000065934/2022 | T | 1275 | M | 2 | 20220310 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | T | 1275 | F | 2 | 20210727 |
| EPI_ISL_19539567 | NSP3 | hCoV-19/Turkey/DEU-S45/2020 | T | 1275 | insPTIQK | 1 | 20200821 |
| EPI_ISL_19828166 | NSP3 | hCoV-19/Australia/QLD0x0154BD/2025 | T | 1275 | I | 11225 | 20250331 |
| EPI_ISL_18818332 | NSP3 | hCoV-19/USA/CA-HLX-STM-MMCT6M98N/2023 | T | 1275 | P | 32 | 20231221 |
| EPI_ISL_8002353 | NSP3 | hCoV-19/Pakistan/PPHRL-7/2021 | T | 1275 | G | 5 | 20211207 |
| EPI_ISL_3421844 | NSP3 | hCoV-19/England/OXON-FA8B19/2020 | T | 1275 | N | 3 | 20201222 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | T | 1275 | insIstopWLLMstop | 24 | 20220213 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | T | 1275 | Q | 25 | 20220213 |
| EPI_ISL_19734802 | NSP3 | hCoV-19/Gansu/PLCDC-0006/2025 | T | 1275 | A | 339 | 20250205 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1275 | D | 1 | 20220210 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | T | 1275 | Y | 2 | 20220210 |
| EPI_ISL_18704737 | NSP3 | hCoV-19/Denmark/DCGC-667879/2023 | T | 1275 | K | 51 | 20231211 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | T | 1275 | L | 4 | 20220128 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | T | 1275 | E | 2 | 20230106 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | T | 1275 | W | 7 | 20230123 |
| EPI_ISL_18807680 | NSP3 | hCoV-19/USA/CO-CDPHE-41615348/2023 | D | 1276 | E | 228 | 20231213 |
| EPI_ISL_17138024 | NSP3 | hCoV-19/USA/SC-1285/2021 | D | 1276 | insLTHG | 1 | 20210323 |
| EPI_ISL_19825106 | NSP3 | hCoV-19/USA/CA-PFZ05075/2025 | D | 1276 | del | 235 | 20250325 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | D | 1276 | I | 12 | 20240715 |
| EPI_ISL_14287993 | NSP3 | hCoV-19/USA/ID-IBL-839199/2022 | D | 1276 | S | 7 | 20220721 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | D | 1276 | P | 3 | 20220207 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | D | 1276 | R | 1 | 20230106 |
| EPI_ISL_19533525 | NSP3 | hCoV-19/USA/CO-CDPHE-42383837/2024 | D | 1276 | H | 8 | 20241025 |
| EPI_ISL_18454294 | NSP3 | hCoV-19/Thailand/NIC_SKA_8194/2023 | D | 1276 | L | 8 | 20231020 |
| EPI_ISL_19344911 | NSP3 | hCoV-19/Japan/FR038-0063/2024 | D | 1276 | Y | 125 | 20240728 |
| EPI_ISL_11378541 | NSP3 | hCoV-19/France/HDF-AG-2112220172/2021 | D | 1276 | insLNCYIN | 1 | 20211217 |
| EPI_ISL_19528846 | NSP3 | hCoV-19/USA/UT-UPHL-241101826806/2024 | D | 1276 | A | 163 | 20241014 |
| EPI_ISL_18673885 | NSP3 | hCoV-19/Belgium/ULG-301637/2023 | D | 1276 | V | 9 | 20231213 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1276 | F | 2 | 20210318 |
| EPI_ISL_19567958 | NSP3 | hCoV-19/Japan/FR004-0558/2024 | D | 1276 | B | 17 | 20241101 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | D | 1276 | stop | 1 | 20210621 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | D | 1276 | Q | 10 | 20220724 |
| EPI_ISL_19814908 | NSP3 | hCoV-19/Canada/AB-ABPHL-131513/2025 | D | 1276 | G | 1016 | 20250322 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | D | 1276 | T | 29 | 20221012 |
| EPI_ISL_14680405 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-S-11025/2022 | D | 1276 | C | 12 | 20220104 |
| EPI_ISL_19758205 | NSP3 | hCoV-19/USA/CA-CDPH-6000021566/2024 | D | 1276 | N | 814 | 20241113 |
| EPI_ISL_10996853 | NSP3 | hCoV-19/India/MH-RFIP09158/2022 | L | 1277 | insSLPRVCstopR | 3 | 20220114 |
| EPI_ISL_11053310 | NSP3 | hCoV-19/India/MP-NCDC-5909132/2021 | L | 1277 | insALPRVCstopRLA | 1 | 20210921 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | L | 1277 | K | 1 | 20220207 |
| EPI_ISL_19318818 | NSP3 | hCoV-19/USA/CO-CDPHE-42068724/2024 | L | 1277 | R | 12 | 20240710 |
| EPI_ISL_11055026 | NSP3 | hCoV-19/India/HP-NCDC-5409226/2021 | L | 1277 | insALPRVCstop | 24 | 20210826 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | L | 1277 | insstopstop | 1 | 20220724 |
| EPI_ISL_9329710 | NSP3 | hCoV-19/India/KA-RFNB-4023/2022 | L | 1277 | insRGASLPRVCstop | 1 | 20220112 |
| EPI_ISL_9697769 | NSP3 | hCoV-19/India/MH-RFIP08719/2022 | L | 1277 | insSLPRVCstopRLA | 4 | 20220101 |
| EPI_ISL_11050694 | NSP3 | hCoV-19/India/HP-NCDC-49093/2021 | L | 1277 | insALPRVCstopRLATQ | 2 | 20210722 |
| EPI_ISL_3079032 | NSP3 | hCoV-19/England/OXON-FA2933/2021 | L | 1277 | W | 1 | 20210705 |
| EPI_ISL_19826857 | NSP3 | hCoV-19/USA/TN-SPHL-0042/2025 | L | 1277 | P | 209 | 20250102 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | L | 1277 | C | 1 | 20220104 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | L | 1277 | Y | 9 | 20230401 |
| EPI_ISL_19229368 | NSP3 | hCoV-19/Luxembourg/LNS4762511/2024 | L | 1277 | J | 16 | 20240522 |
| EPI_ISL_5933493 | NSP3 | hCoV-19/Chile/LR-UACH-00407/2021 | L | 1277 | H | 1 | 20211027 |
| EPI_ISL_12146277 | NSP3 | hCoV-19/Turkey/HSGM-GS1653/2022 | L | 1277 | S | 1 | 20220401 |
| EPI_ISL_3705898 | NSP3 | hCoV-19/England/MILK-1C13EF2/2021 | L | 1277 | insE | 1 | 20210818 |
| EPI_ISL_19825106 | NSP3 | hCoV-19/USA/CA-PFZ05075/2025 | L | 1277 | del | 213 | 20250325 |
| EPI_ISL_18454294 | NSP3 | hCoV-19/Thailand/NIC_SKA_8194/2023 | L | 1277 | F | 3 | 20231020 |
| EPI_ISL_4530175 | NSP3 | hCoV-19/England/PHEC-3G072G79/2021 | L | 1277 | M | 1 | 20210919 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | L | 1277 | A | 2 | 20220726 |
| EPI_ISL_19705505 | NSP3 | hCoV-19/USA/MS-MSPHL-0012/2025 | L | 1277 | V | 20 | 20250122 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | L | 1277 | T | 10 | 20230123 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | L | 1277 | stop | 3 | 20220210 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | L | 1277 | N | 4 | 20221018 |
| EPI_ISL_9727155 | NSP3 | hCoV-19/India/MH-RFIP08948/2022 | L | 1277 | insSLPRVCstopRLATQ | 45 | 20220125 |
| EPI_ISL_18734640 | NSP3 | hCoV-19/Denmark/DCGC-668869/2023 | L | 1277 | Q | 22 | 20231211 |
| EPI_ISL_19822493 | NSP3 | hCoV-19/Australia/QLD0x01547B/2025 | L | 1277 | I | 751 | 20250324 |
| EPI_ISL_1544021 | NSP3 | hCoV-19/India/MH-NCCS-134004/2021 | M | 1278 | H | 1 | 20210224 |
| EPI_ISL_15933658 | NSP3 | hCoV-19/India/AP-CCMB-CID4507/2022 | M | 1278 | A | 15 | 20220816 |
| EPI_ISL_19724580 | NSP3 | hCoV-19/Italy/LOM_Unimi-279-25/2025 | M | 1278 | K | 183 | 20250107 |
| EPI_ISL_19831343 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56842/2025 | M | 1278 | I | 1242 | 20250328 |
| EPI_ISL_18936259 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00170/2023 | M | 1278 | W | 4 | 20230424 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | M | 1278 | Q | 6 | 20210915 |
| EPI_ISL_19705505 | NSP3 | hCoV-19/USA/MS-MSPHL-0012/2025 | M | 1278 | L | 6514 | 20250122 |
| EPI_ISL_2903112 | NSP3 | hCoV-19/England/OXON-F88371/2021 | M | 1278 | insstopTIL | 2 | 20210623 |
| EPI_ISL_8724991 | NSP3 | hCoV-19/Colombia/VAC-UV-20030255/2022 | M | 1278 | stop | 6 | 20220103 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | M | 1278 | Y | 2 | 20220104 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | M | 1278 | C | 7 | 20220305 |
| EPI_ISL_19536893 | NSP3 | hCoV-19/Poland/Kce-663/2024 | M | 1278 | R | 121 | 20241030 |
| EPI_ISL_19601909 | NSP3 | hCoV-19/USA/AZ-CDC-LC1125904/2024 | M | 1278 | T | 954 | 20241119 |
| EPI_ISL_13390392 | NSP3 | hCoV-19/India/KA-RFNB-1377/2021 | M | 1278 | D | 2 | 20211127 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | M | 1278 | E | 1 | 20210326 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | M | 1278 | S | 9 | 20230106 |
| EPI_ISL_19811968 | NSP3 | hCoV-19/Australia/QLD0x015407/2025 | M | 1278 | V | 742 | 20250314 |
| EPI_ISL_18831502 | NSP3 | hCoV-19/Pakistan/DUHS-14/2024 | M | 1278 | del | 176 | 20240117 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | M | 1278 | F | 2 | 20220724 |
| EPI_ISL_8812991 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111821-1258/2021 | M | 1278 | G | 3 | 20211118 |
| EPI_ISL_8812991 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111821-1258/2021 | A | 1279 | insLCRQFstop | 1 | 20211118 |
| EPI_ISL_9757344 | NSP3 | hCoV-19/USA/CA-HLX-STM-CSYR5YUJC/2022 | A | 1279 | H | 1 | 20220113 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | A | 1279 | W | 3 | 20210812 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | A | 1279 | insstopVstopCENYRSCS | 1 | 20210521 |
| EPI_ISL_19773368 | NSP3 | hCoV-19/Canada/BC-BCCDC-768798/2025 | A | 1279 | T | 1780 | 20250211 |
| EPI_ISL_17203485 | NSP3 | hCoV-19/USA/CA-CCPHL-4651/2023 | A | 1279 | I | 12 | 20230215 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | A | 1279 | N | 1 | 20210727 |
| EPI_ISL_3421684 | NSP3 | hCoV-19/Wales/OXON-FA6FC4/2020 | A | 1279 | K | 1 | 20201126 |
| EPI_ISL_8812991 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111821-1258/2021 | A | 1279 | C | 4 | 20211118 |
| EPI_ISL_8002353 | NSP3 | hCoV-19/Pakistan/PPHRL-7/2021 | A | 1279 | insQFstop | 2 | 20211207 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | A | 1279 | stop | 2 | 20210428 |
| EPI_ISL_19785585 | NSP3 | hCoV-19/Japan/KPIPH-FR014-0082/2025 | A | 1279 | V | 4363 | 20250304 |
| EPI_ISL_19812419 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147981/2025 | A | 1279 | S | 1101 | 20250318 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | A | 1279 | L | 25 | 20220724 |
| EPI_ISL_19595553 | NSP3 | hCoV-19/Yunnan/YNCDC-2522/2024 | A | 1279 | D | 83 | 20240929 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | A | 1279 | P | 15 | 20240715 |
| EPI_ISL_13390392 | NSP3 | hCoV-19/India/KA-RFNB-1377/2021 | A | 1279 | E | 4 | 20211127 |
| EPI_ISL_3421844 | NSP3 | hCoV-19/England/OXON-FA8B19/2020 | A | 1279 | M | 1 | 20201222 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | A | 1279 | insstopVstopCENYRSCRR | 1 | 20210813 |
| EPI_ISL_18831502 | NSP3 | hCoV-19/Pakistan/DUHS-14/2024 | A | 1279 | del | 154 | 20240117 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | A | 1279 | R | 14 | 20230401 |
| EPI_ISL_477235 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0034/2020 | A | 1279 | Y | 1 | 20200616 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | A | 1279 | insstopVstopCENYstopSCRR | 1 | 20210802 |
| EPI_ISL_19368205 | NSP3 | hCoV-19/Poland/Kce-404/2024 | A | 1279 | G | 36 | 20240813 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | A | 1280 | I | 3 | 20220207 |
| EPI_ISL_14797671 | NSP3 | hCoV-19/India/TG-RFCH07345_CID3773/2022 | A | 1280 | P | 35 | 20220722 |
| EPI_ISL_14217763 | NSP3 | hCoV-19/France/IDF-AphpSA-MB000878/2022 | A | 1280 | insLL | 1 | 20220718 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | A | 1280 | Q | 3 | 20210812 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | A | 1280 | C | 2 | 20220623 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | A | 1280 | del | 157 | 20240628 |
| EPI_ISL_9571909 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS_22_01391/2022 | A | 1280 | E | 2 | 20220120 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | A | 1280 | K | 6 | 20220227 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1280 | M | 1 | 20220210 |
| EPI_ISL_19467305 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004207987/2024 | A | 1280 | S | 118 | 20240829 |
| EPI_ISL_15387019 | NSP3 | hCoV-19/Morocco/FMP391/2021 | A | 1280 | R | 3 | 20211227 |
| EPI_ISL_19758257 | NSP3 | hCoV-19/USA/MN-MDH-46220/2025 | A | 1280 | D | 89 | 20250211 |
| EPI_ISL_17722380 | NSP3 | hCoV-19/Malaysia/MGVI_GU0979/2023 | A | 1280 | G | 20 | 20230417 |
| EPI_ISL_14616526 | NSP3 | hCoV-19/France/IDF-AphpSA-ZM000882/2022 | A | 1280 | F | 2 | 20220801 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | A | 1280 | L | 41 | 20221018 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | A | 1280 | insVMstopKLPKLstopETL | 1 | 20210121 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | A | 1280 | stop | 8 | 20211015 |
| EPI_ISL_17268820 | NSP3 | hCoV-19/Sweden/03_SE600_500000283748SP/2023 | A | 1280 | insXX | 1 | 20230116 |
| EPI_ISL_19777551 | NSP3 | hCoV-19/USA/NE-RP251924/2025 | A | 1280 | T | 345 | 20250307 |
| EPI_ISL_17049000 | NSP3 | hCoV-19/France/IDF-AphpSA-AM000960/2023 | A | 1280 | N | 11 | 20230123 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | A | 1280 | Y | 4 | 20220724 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | A | 1280 | W | 2 | 20230106 |
| EPI_ISL_19831281 | NSP3 | hCoV-19/Japan/FR027-0022/2025 | A | 1280 | V | 2269 | 20250321 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | A | 1280 | H | 2 | 20220726 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | A | 1280 | insstopstop | 1 | 20220210 |
| EPI_ISL_13390392 | NSP3 | hCoV-19/India/KA-RFNB-1377/2021 | Y | 1281 | V | 4 | 20211127 |
| EPI_ISL_19527942 | NSP3 | hCoV-19/Germany/ST-RKI-I-1145808/2024 | Y | 1281 | H | 128 | 20241014 |
| EPI_ISL_14519228 | NSP3 | hCoV-19/Germany/BW-RKI-I-950168/2022 | Y | 1281 | S | 33 | 20220809 |
| EPI_ISL_17474693 | NSP3 | hCoV-19/Pakistan/BATCH-02-SAMPLE20/2023 | Y | 1281 | D | 15 | 20230320 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | Y | 1281 | T | 2 | 20220726 |
| EPI_ISL_11415727 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC95LAMS/2022 | Y | 1281 | R | 15 | 20220131 |
| EPI_ISL_8555707 | NSP3 | hCoV-19/USA/NJ-CDC-IBX441682628572/2021 | Y | 1281 | insKP | 1 | 20211221 |
| EPI_ISL_19741144 | NSP3 | hCoV-19/USA/CO-CDPHE-42973174/2025 | Y | 1281 | C | 909 | 20250127 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | Y | 1281 | M | 4 | 20220105 |
| EPI_ISL_17372582 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2611/2022 | Y | 1281 | F | 36 | 20221228 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | Y | 1281 | P | 3 | 20220227 |
| EPI_ISL_1309771 | NSP3 | hCoV-19/England/OXON-F766AA/2021 | Y | 1281 | I | 4 | 20210215 |
| EPI_ISL_16599796 | NSP3 | hCoV-19/USA/TX-HMH-123115/2023 | Y | 1281 | L | 45 | 20230110 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | Y | 1281 | del | 124 | 20240715 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | Y | 1281 | W | 11 | 20230401 |
| EPI_ISL_17722380 | NSP3 | hCoV-19/Malaysia/MGVI_GU0979/2023 | Y | 1281 | N | 12 | 20230417 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | Y | 1281 | insK | 1 | 20211015 |
| EPI_ISL_19507701 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10133555/2024 | Y | 1281 | stop | 3 | 20241013 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | V | 1282 | del | 133 | 20240715 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | V | 1282 | K | 2 | 20221012 |
| EPI_ISL_17409181 | NSP3 | hCoV-19/Australia/VIC82322/2023 | V | 1282 | E | 8 | 20230327 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | V | 1282 | Q | 1 | 20220305 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | V | 1282 | R | 1 | 20220120 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | V | 1282 | N | 1 | 20210621 |
| EPI_ISL_1249143 | NSP3 | hCoV-19/England/OXON-F6DE44/2021 | V | 1282 | insKW | 1 | 20210210 |
| EPI_ISL_16599796 | NSP3 | hCoV-19/USA/TX-HMH-123115/2023 | V | 1282 | M | 7 | 20230110 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1282 | D | 2 | 20220210 |
| EPI_ISL_19831717 | NSP3 | hCoV-19/Luxembourg/LNS7681215/2025 | V | 1282 | I | 350 | 20250312 |
| EPI_ISL_18908653 | NSP3 | hCoV-19/USA/FL-CDC-LC1094680/2024 | V | 1282 | L | 182 | 20240201 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1282 | C | 7 | 20230108 |
| EPI_ISL_8652366 | NSP3 | hCoV-19/India/MH-RFIP07430/2021 | V | 1282 | insCstopRLAXXXXX | 3 | 20211228 |
| EPI_ISL_13390392 | NSP3 | hCoV-19/India/KA-RFNB-1377/2021 | V | 1282 | T | 5 | 20211127 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | V | 1282 | P | 5 | 20230401 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | V | 1282 | stop | 7 | 20220105 |
| EPI_ISL_16694159 | NSP3 | hCoV-19/Germany/BY-RKI-I-1091304/2023 | V | 1282 | G | 1117 | 20230112 |
| EPI_ISL_14616526 | NSP3 | hCoV-19/France/IDF-AphpSA-ZM000882/2022 | V | 1282 | F | 3 | 20220801 |
| EPI_ISL_18886789 | NSP3 | hCoV-19/Paraguay/747316/2024 | V | 1282 | A | 93 | 20240122 |
| EPI_ISL_7870675 | NSP3 | hCoV-19/India/MH-RFIP05176/2021 | V | 1282 | insCstopRLATQXXXXX | 2 | 20211103 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | V | 1282 | Y | 7 | 20220726 |
| EPI_ISL_11062622 | NSP3 | hCoV-19/India/HP-NCDC-7709290/2021 | V | 1282 | insCstopXXXXX | 4 | 20211225 |
| EPI_ISL_11522522 | NSP3 | hCoV-19/Gabon/W0756/2021 | V | 1282 | S | 1 | 20210127 |
| EPI_ISL_12938780 | NSP3 | hCoV-19/India/KA-NIMH-SEQ-3451/2021 | V | 1282 | insstop | 1 | 20210909 |
| EPI_ISL_19502807 | NSP3 | hCoV-19/Russia/SPE-RII-MH197197S/2024 | D | 1283 | E | 117 | 20240827 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | D | 1283 | S | 5 | 20210812 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | D | 1283 | L | 5 | 20210915 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | D | 1283 | P | 1 | 20221012 |
| EPI_ISL_17454463 | NSP3 | hCoV-19/Puerto Rico/RCMI-1187983/2023 | D | 1283 | V | 33 | 20230118 |
| EPI_ISL_19620560 | NSP3 | hCoV-19/Canada/ON-PHL-202424224/2024 | D | 1283 | N | 709 | 20241205 |
| EPI_ISL_19537623 | NSP3 | hCoV-19/Sweden/U-R828411/2024 | D | 1283 | G | 309 | 20241008 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 1283 | R | 34 | 20230108 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | D | 1283 | insTI | 1 | 20210809 |
| EPI_ISL_4634614 | NSP3 | hCoV-19/Thailand/Chiang Mai_SEQ16054/2021 | D | 1283 | F | 1 | 20210908 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | D | 1283 | Q | 1 | 20220120 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | D | 1283 | I | 2 | 20220726 |
| EPI_ISL_19181594 | NSP3 | hCoV-19/Singapore/R29MQ121/2024 | D | 1283 | B | 23 | 20240517 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | D | 1283 | del | 125 | 20240806 |
| EPI_ISL_19829417 | NSP3 | hCoV-19/USA/CA-CDC-2-8366123/2025 | D | 1283 | Y | 1660 | 20250209 |
| EPI_ISL_18269041 | NSP3 | hCoV-19/USA/MS-MSPHL-0570/2023 | D | 1283 | K | 3 | 20230815 |
| EPI_ISL_19086770 | NSP3 | hCoV-19/Japan/PG-593641/2024 | D | 1283 | A | 37 | 20240115 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | D | 1283 | H | 65 | 20230401 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | D | 1283 | T | 8 | 20220305 |
| EPI_ISL_8002353 | NSP3 | hCoV-19/Pakistan/PPHRL-7/2021 | D | 1283 | stop | 9 | 20211207 |
| EPI_ISL_19432369 | NSP3 | hCoV-19/Canada/ON-PHL-202414349/2024 | N | 1284 | S | 409 | 20240913 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | N | 1284 | L | 3 | 20220726 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | N | 1284 | A | 2 | 20220105 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | N | 1284 | del | 119 | 20240806 |
| EPI_ISL_5033655 | NSP3 | hCoV-19/Portugal/PT18046/2021 | N | 1284 | G | 1 | 20210922 |
| EPI_ISL_19028153 | NSP3 | hCoV-19/USA/LA-EVTL21734/2024 | N | 1284 | K | 71 | 20240318 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | N | 1284 | F | 3 | 20220120 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | N | 1284 | R | 5 | 20230401 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | N | 1284 | insLM | 1 | 20221018 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | N | 1284 | M | 5 | 20210915 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | N | 1284 | C | 19 | 20230624 |
| EPI_ISL_19761385 | NSP3 | hCoV-19/USA/UT-UPHL-250228583862/2025 | N | 1284 | T | 146 | 20250216 |
| EPI_ISL_19312327 | NSP3 | hCoV-19/Wales/CLIMB-CM7YG1W5/2024 | N | 1284 | B | 10 | 20240722 |
| EPI_ISL_19784264 | NSP3 | hCoV-19/USA/NJ-GBW-GKISBBBE97816/2025 | N | 1284 | H | 193 | 20250306 |
| EPI_ISL_1249151 | NSP3 | hCoV-19/England/OXON-F6E6A5/2021 | N | 1284 | insstopY | 1 | 20210214 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | N | 1284 | stop | 2 | 20210621 |
| EPI_ISL_19223078 | NSP3 | hCoV-19/USA/CA-CDPH-500137708/2024 | N | 1284 | Y | 13 | 20240510 |
| EPI_ISL_19810698 | NSP3 | hCoV-19/Sweden/N-2A954331523/2025 | N | 1284 | D | 256 | 20250311 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | N | 1284 | W | 1 | 20201214 |
| EPI_ISL_8002353 | NSP3 | hCoV-19/Pakistan/PPHRL-7/2021 | N | 1284 | E | 4 | 20211207 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1284 | Q | 52 | 20230108 |
| EPI_ISL_19812145 | NSP3 | hCoV-19/Germany/BY-MVP-000026237/2025 | N | 1284 | I | 15 | 20250106 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | N | 1284 | V | 2 | 20220207 |
| EPI_ISL_17021243 | NSP3 | hCoV-19/Chile/TA-199237/2021 | S | 1285 | H | 3 | 20211227 |
| EPI_ISL_2228941 | NSP3 | hCoV-19/USA/SC-CDC-2-4369501/2021 | S | 1285 | insSLT | 4 | 20210507 |
| EPI_ISL_19588878 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55607/2024 | S | 1285 | C | 41 | 20241112 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1285 | Q | 50 | 20230101 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | S | 1285 | K | 1 | 20210809 |
| EPI_ISL_14678022 | NSP3 | hCoV-19/India/TN-INSACOG-CBR-S-7624/2021 | S | 1285 | insIVWHVN | 2 | 20211111 |
| EPI_ISL_19600685 | NSP3 | hCoV-19/USA/CA-CDPH-6000021184/2024 | S | 1285 | Y | 526 | 20241009 |
| EPI_ISL_19426795 | NSP3 | hCoV-19/France/ARA-HCL024138539101/2024 | S | 1285 | P | 506 | 20240905 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | S | 1285 | insNGCLRRQF | 1 | 20210813 |
| EPI_ISL_19166922 | NSP3 | hCoV-19/Russia/KDA-RII-MH181048S/2024 | S | 1285 | A | 780 | 20240212 |
| EPI_ISL_17272841 | NSP3 | hCoV-19/Belgium/rega-46714/2023 | S | 1285 | I | 22 | 20230102 |
| EPI_ISL_18734310 | NSP3 | hCoV-19/Singapore/R95MR154/2023 | S | 1285 | insQQR | 1 | 20231226 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | S | 1285 | insW | 1 | 20221012 |
| EPI_ISL_8812991 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111821-1258/2021 | S | 1285 | insstopstopIIstop | 2 | 20211118 |
| EPI_ISL_8717066 | NSP3 | hCoV-19/USA/CO-CDC-MMB12241501/2021 | S | 1285 | insT | 2 | 20211217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 1285 | D | 1 | 20210318 |
| EPI_ISL_1829150 | NSP3 | hCoV-19/Switzerland/VD-CHUV-GEN4485/2021 | S | 1285 | insGLGC | 1 | 20210421 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | S | 1285 | N | 14 | 20240715 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1285 | G | 4 | 20220210 |
| EPI_ISL_999070 | NSP3 | hCoV-19/England/OXON-F547BE/2021 | S | 1285 | V | 1 | 20210113 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | S | 1285 | L | 50 | 20230401 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | S | 1285 | del | 288 | 20240806 |
| EPI_ISL_19820182 | NSP3 | hCoV-19/USA/NY-PRL-250401_81D05/2025 | S | 1285 | F | 27792 | 20250320 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | S | 1285 | insQCTLL | 1 | 20210727 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | S | 1285 | stop | 7 | 20220120 |
| EPI_ISL_17596423 | NSP3 | hCoV-19/Singapore/R27MR21/2023 | S | 1285 | T | 28 | 20230420 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | S | 1285 | E | 1 | 20220207 |
| EPI_ISL_14348033 | NSP3 | hCoV-19/Japan/PG-285475/2022 | S | 1285 | insRAC | 1 | 20220718 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | S | 1285 | insMNYLstop | 1 | 20210915 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | S | 1286 | del | 142 | 20240806 |
| EPI_ISL_15636576 | NSP3 | hCoV-19/Germany/NI-IOV-60531337/2022 | S | 1286 | F | 3 | 20220926 |
| EPI_ISL_18292618 | NSP3 | hCoV-19/New Zealand/23ZA4095/2023 | S | 1286 | V | 20 | 20230812 |
| EPI_ISL_19670339 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-144709/2024 | S | 1286 | I | 6034 | 20241216 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | S | 1286 | M | 31 | 20220213 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1286 | L | 4 | 20230108 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | S | 1286 | Y | 3 | 20230217 |
| EPI_ISL_1249143 | NSP3 | hCoV-19/England/OXON-F6DE44/2021 | S | 1286 | A | 2 | 20210210 |
| EPI_ISL_19260742 | NSP3 | hCoV-19/Brazil/SP-IAL-357723396/2024 | S | 1286 | T | 27 | 20240502 |
| EPI_ISL_19714509 | NSP3 | hCoV-19/Russia/MOS-RII-MH219611S/2024 | S | 1286 | N | 348 | 20241121 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | S | 1286 | K | 1 | 20210813 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | S | 1286 | insAMstopTILV | 1 | 20210806 |
| EPI_ISL_16599796 | NSP3 | hCoV-19/USA/TX-HMH-123115/2023 | S | 1286 | E | 7 | 20230110 |
| EPI_ISL_19461970 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08700/2024 | S | 1286 | G | 203 | 20240921 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | S | 1286 | Q | 1 | 20210802 |
| EPI_ISL_19525772 | NSP3 | hCoV-19/USA/NY-URMC-O9S1R723-1/2024 | S | 1286 | R | 59 | 20240905 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | S | 1286 | H | 1 | 20201214 |
| EPI_ISL_19781684 | NSP3 | hCoV-19/USA/NE-RP251951/2025 | S | 1286 | C | 289 | 20250305 |
| EPI_ISL_8002353 | NSP3 | hCoV-19/Pakistan/PPHRL-7/2021 | S | 1286 | stop | 6 | 20211207 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | L | 1287 | C | 3 | 20220108 |
| EPI_ISL_12938780 | NSP3 | hCoV-19/India/KA-NIMH-SEQ-3451/2021 | L | 1287 | D | 1 | 20210909 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 1287 | insF | 1 | 20230108 |
| EPI_ISL_19426866 | NSP3 | hCoV-19/France/OCC-RELAB-HCL724000442201/2024 | L | 1287 | R | 149 | 20240828 |
| EPI_ISL_19024382 | NSP3 | hCoV-19/USA/VA-VCUVAS3-LOKH811862/2024 | L | 1287 | I | 180 | 20240305 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | L | 1287 | del | 231 | 20240806 |
| EPI_ISL_19534804 | NSP3 | hCoV-19/Japan/FR012-0638/2024 | L | 1287 | P | 2340 | 20241011 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | L | 1287 | N | 30 | 20220213 |
| EPI_ISL_14678022 | NSP3 | hCoV-19/India/TN-INSACOG-CBR-S-7624/2021 | L | 1287 | A | 2 | 20211111 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | L | 1287 | T | 1 | 20220207 |
| EPI_ISL_1979092 | NSP3 | hCoV-19/Wales/OXON-F8183D/2021 | L | 1287 | K | 1 | 20210411 |
| EPI_ISL_18531516 | NSP3 | hCoV-19/Italy/LOM-69518432/2023 | L | 1287 | Y | 17 | 20231115 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | L | 1287 | insstopETstopstopIIstop | 1 | 20200715 |
| EPI_ISL_19824754 | NSP3 | hCoV-19/France/PAC-RELAB-HCL725000042201/2025 | L | 1287 | F | 5040 | 20250328 |
| EPI_ISL_8002353 | NSP3 | hCoV-19/Pakistan/PPHRL-7/2021 | L | 1287 | stop | 3 | 20211207 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 1287 | V | 43 | 20230108 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | L | 1287 | G | 4 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1287 | E | 2 | 20220210 |
| EPI_ISL_19828722 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBE05537/2025 | L | 1287 | H | 105 | 20250406 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | L | 1287 | insIstop | 1 | 20200729 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | L | 1287 | S | 4 | 20220305 |
| EPI_ISL_19782272 | NSP3 | hCoV-19/USA/NY-NYCPHL-019572/2024 | L | 1287 | J | 8 | 20240820 |
| EPI_ISL_16879986 | NSP3 | hCoV-19/Belgium/Briant-12302101901/2023 | L | 1287 | insT | 1 | 20230206 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | T | 1288 | del | 267 | 20240806 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1288 | V | 50 | 20230101 |
| EPI_ISL_19826912 | NSP3 | hCoV-19/USA/TN-SPHL-0150/2025 | T | 1288 | N | 1061 | 20250117 |
| EPI_ISL_19825967 | NSP3 | hCoV-19/Singapore/Y25R15MSC116/2025 | T | 1288 | I | 10587 | 20250407 |
| EPI_ISL_19539567 | NSP3 | hCoV-19/Turkey/DEU-S45/2020 | T | 1288 | insGDI | 1 | 20200821 |
| EPI_ISL_19541131 | NSP3 | hCoV-19/Japan/TKYnat18169/2024 | T | 1288 | A | 106 | 20241027 |
| EPI_ISL_8872102 | NSP3 | hCoV-19/USA/NM-CDC-ASC210574463/2021 | T | 1288 | P | 8 | 20211228 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | T | 1288 | K | 13 | 20240715 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | T | 1288 | insstopstopIIstopS | 1 | 20210812 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | T | 1288 | Y | 35 | 20220213 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | T | 1288 | F | 2 | 20220724 |
| EPI_ISL_16599796 | NSP3 | hCoV-19/USA/TX-HMH-123115/2023 | T | 1288 | stop | 8 | 20230110 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | T | 1288 | L | 32 | 20230401 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | T | 1288 | C | 5 | 20230401 |
| EPI_ISL_1249143 | NSP3 | hCoV-19/England/OXON-F6DE44/2021 | T | 1288 | G | 3 | 20210210 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | T | 1288 | Q | 3 | 20220225 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1288 | E | 2 | 20220210 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | T | 1288 | H | 1 | 20210920 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1288 | R | 5 | 20221012 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | T | 1288 | S | 153 | 20241001 |
| EPI_ISL_19826292 | NSP3 | hCoV-19/Canada/ON-HSC-202501562-v1/2025 | I | 1289 | L | 856 | 20250327 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | I | 1289 | insT | 1 | 20210813 |
| EPI_ISL_19369196 | NSP3 | hCoV-19/Taiwan/CDC-F94114/2024 | I | 1289 | S | 41 | 20240821 |
| EPI_ISL_19425473 | NSP3 | hCoV-19/USA/TX-HMH-M-145613/2024 | I | 1289 | F | 12 | 20240824 |
| EPI_ISL_19482087 | NSP3 | hCoV-19/Spain/MC-HCUVA-11420171/2024 | I | 1289 | V | 620 | 20240926 |
| EPI_ISL_13469813 | NSP3 | hCoV-19/Nigeria/NCDC-NR-GL-004796/2022 | I | 1289 | D | 1 | 20220331 |
| EPI_ISL_17247762 | NSP3 | hCoV-19/Croatia/HZJZ_3030/2023 | I | 1289 | insVWHV | 1 | 20230213 |
| EPI_ISL_19772248 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10641/2025 | I | 1289 | del | 151 | 20250220 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | I | 1289 | M | 9 | 20241001 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | I | 1289 | insstop | 1 | 20210802 |
| EPI_ISL_18082573 | NSP3 | hCoV-19/Singapore/R47MR58/2023 | I | 1289 | J | 14 | 20230703 |
| EPI_ISL_19806199 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRK1/2025 | I | 1289 | T | 196 | 20250310 |
| EPI_ISL_19383550 | NSP3 | hCoV-19/USA/IA-SHL-2487736/2024 | I | 1289 | N | 12 | 20240829 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | I | 1289 | Y | 4 | 20220724 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | I | 1289 | C | 3 | 20221012 |
| EPI_ISL_12938780 | NSP3 | hCoV-19/India/KA-NIMH-SEQ-3451/2021 | I | 1289 | insYXXXXXXX | 1 | 20210909 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 1289 | stop | 51 | 20230101 |
| EPI_ISL_3421947 | NSP3 | hCoV-19/England/OXON-FA9CD9/2021 | I | 1289 | A | 1 | 20210713 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | I | 1289 | R | 2 | 20220305 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | K | 1290 | S | 3 | 20210920 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 1290 | L | 13 | 20221012 |
| EPI_ISL_9166017 | NSP3 | hCoV-19/Wales/PHWC-P8GTBY/2022 | K | 1290 | H | 421 | 20220104 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | K | 1290 | Y | 1 | 20220108 |
| EPI_ISL_4261655 | NSP3 | hCoV-19/France/BRE-8600208035/2021 | K | 1290 | G | 1 | 20210906 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1290 | I | 1 | 20220210 |
| EPI_ISL_16069998 | NSP3 | hCoV-19/USA/CA-ASC-210783023/2022 | K | 1290 | M | 22 | 20221114 |
| EPI_ISL_19602055 | NSP3 | hCoV-19/USA/WV-CDC-LC1125735/2024 | K | 1290 | E | 146 | 20241202 |
| EPI_ISL_19704251 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00024/2022 | K | 1290 | A | 3 | 20220606 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | K | 1290 | P | 1 | 20241001 |
| EPI_ISL_19562326 | NSP3 | hCoV-19/Canada/ON-PHL-202421906/2024 | K | 1290 | T | 220 | 20241114 |
| EPI_ISL_16599796 | NSP3 | hCoV-19/USA/TX-HMH-123115/2023 | K | 1290 | stop | 14 | 20230110 |
| EPI_ISL_19644728 | NSP3 | hCoV-19/USA/VA-GBW-GKISBBBF34778/2024 | K | 1290 | N | 906 | 20241226 |
| EPI_ISL_19785660 | NSP3 | hCoV-19/Brazil/DF-LACENDF-530151811/2025 | K | 1290 | R | 298 | 20250220 |
| EPI_ISL_12934453 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-021322-1673/2022 | K | 1290 | insYstopVstop | 28 | 20220213 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | K | 1290 | insNLMNYLEYstopVstop | 5 | 20230401 |
| EPI_ISL_17021243 | NSP3 | hCoV-19/Chile/TA-199237/2021 | K | 1290 | F | 8 | 20211227 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | K | 1290 | del | 137 | 20240806 |
| EPI_ISL_19424470 | NSP3 | hCoV-19/Japan/FR055-0249/2024 | K | 1290 | Q | 22 | 20240816 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | K | 1290 | C | 3 | 20230401 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | K | 1290 | V | 2 | 20220726 |
| EPI_ISL_12291386 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1120/2022 | K | 1291 | M | 4 | 20220115 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | K | 1291 | F | 5 | 20221018 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | K | 1291 | A | 2 | 20220305 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | K | 1291 | del | 127 | 20240806 |
| EPI_ISL_1178733 | NSP3 | hCoV-19/England/OXON-F67DF2/2021 | K | 1291 | insYCTGSI | 1 | 20210116 |
| EPI_ISL_19826396 | NSP3 | hCoV-19/Canada/ON-PHL-202505096/2025 | K | 1291 | E | 2205 | 20250329 |
| EPI_ISL_8882744 | NSP3 | hCoV-19/India/GA-NCCS-3055200149601/2021 | K | 1291 | insL | 2 | 20210708 |
| EPI_ISL_16962272 | NSP3 | hCoV-19/USA/CA-CDC-QDX46500705/2023 | K | 1291 | S | 11 | 20230202 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | K | 1291 | W | 1 | 20221012 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 1291 | L | 54 | 20230101 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1291 | G | 1 | 20201214 |
| EPI_ISL_11355421 | NSP3 | hCoV-19/France/GES-ChNa-210059857801/2021 | K | 1291 | Y | 1 | 20210719 |
| EPI_ISL_19385281 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YMJWT/2024 | K | 1291 | R | 213 | 20240706 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | K | 1291 | C | 2 | 20220207 |
| EPI_ISL_16799585 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K051948/2023 | K | 1291 | T | 334 | 20230110 |
| EPI_ISL_18744736 | NSP3 | hCoV-19/Austria/AGES-1100130/2023 | K | 1291 | Q | 117 | 20231227 |
| EPI_ISL_6325054 | NSP3 | hCoV-19/Thailand/Khon Kaen_SEQ19469/2021 | K | 1291 | H | 1 | 20211025 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | K | 1291 | insYRRGW | 1 | 20210813 |
| EPI_ISL_18859868 | NSP3 | hCoV-19/USA/FL-CDC-QDX91705533/2024 | K | 1291 | I | 27 | 20240119 |
| EPI_ISL_1406962 | NSP3 | hCoV-19/Switzerland/VD-ETHZ-470422/2021 | K | 1291 | stop | 2 | 20210127 |
| EPI_ISL_3421826 | NSP3 | hCoV-19/England/OXON-FA8496/2020 | K | 1291 | V | 1 | 20201102 |
| EPI_ISL_19826739 | NSP3 | hCoV-19/USA/MN-MDH-46602/2025 | K | 1291 | N | 38 | 20250330 |
| EPI_ISL_19704251 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00024/2022 | K | 1291 | insNL | 1 | 20220606 |
| EPI_ISL_19539567 | NSP3 | hCoV-19/Turkey/DEU-S45/2020 | P | 1292 | insAN | 1 | 20200821 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | P | 1292 | N | 3 | 20220105 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | P | 1292 | E | 9 | 20221018 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | P | 1292 | insFstopSYYstopENLM | 1 | 20210815 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | P | 1292 | Q | 52 | 20230401 |
| EPI_ISL_11394668 | NSP3 | hCoV-19/Brazil/CE-ITV-178833/2021 | P | 1292 | K | 2 | 20210316 |
| EPI_ISL_1979092 | NSP3 | hCoV-19/Wales/OXON-F8183D/2021 | P | 1292 | V | 1 | 20210411 |
| EPI_ISL_19578021 | NSP3 | hCoV-19/Canada/ON-PHL-202422750/2024 | P | 1292 | T | 223 | 20241121 |
| EPI_ISL_19704251 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00024/2022 | P | 1292 | M | 3 | 20220606 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | P | 1292 | stop | 3 | 20220120 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | P | 1292 | Y | 1 | 20220724 |
| EPI_ISL_8719664 | NSP3 | hCoV-19/USA/TX-DSHS-13351/2021 | P | 1292 | A | 5 | 20211122 |
| EPI_ISL_11336290 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0476/2021 | P | 1292 | F | 3 | 20211218 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | P | 1292 | D | 4 | 20220131 |
| EPI_ISL_17782171 | NSP3 | hCoV-19/Austria/AGES-1138551/2023 | P | 1292 | R | 9 | 20230522 |
| EPI_ISL_19823432 | NSP3 | hCoV-19/Japan/FR021-0254/2025 | P | 1292 | L | 1413 | 20250306 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | P | 1292 | H | 228 | 20241001 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | P | 1292 | insL | 1 | 20230108 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | P | 1292 | G | 1 | 20210424 |
| EPI_ISL_19744549 | NSP3 | hCoV-19/Singapore/Y25R8MSC57/2025 | P | 1292 | S | 2665 | 20250219 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | P | 1292 | del | 140 | 20240806 |
| EPI_ISL_19095637 | NSP3 | hCoV-19/Singapore/R21MQ64/2024 | N | 1293 | B | 16 | 20240415 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | N | 1293 | insFSKLINIIIWFL | 1 | 20210326 |
| EPI_ISL_11947577 | NSP3 | hCoV-19/England/DHSC-CYNRWBW/2022 | N | 1293 | P | 1 | 20220109 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | N | 1293 | E | 2 | 20220227 |
| EPI_ISL_5033655 | NSP3 | hCoV-19/Portugal/PT18046/2021 | N | 1293 | G | 3 | 20210922 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | N | 1293 | I | 9 | 20230217 |
| EPI_ISL_19474111 | NSP3 | hCoV-19/USA/CA-CDPH-500142469/2024 | N | 1293 | D | 123 | 20240902 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | N | 1293 | insstop | 1 | 20200730 |
| EPI_ISL_2404761 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050921-705/2021 | N | 1293 | insstopSYYstop | 1 | 20210509 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | N | 1293 | W | 2 | 20220104 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | N | 1293 | R | 4 | 20210915 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | N | 1293 | L | 2 | 20220726 |
| EPI_ISL_18927251 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69596577/2024 | N | 1293 | K | 98 | 20240131 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | N | 1293 | Q | 1 | 20200730 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | N | 1293 | F | 2 | 20230401 |
| EPI_ISL_16136078 | NSP3 | hCoV-19/South Korea/KDCA168182/2022 | N | 1293 | H | 4 | 20221124 |
| EPI_ISL_19507710 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10014527/2024 | N | 1293 | stop | 4 | 20241001 |
| EPI_ISL_18359512 | NSP3 | hCoV-19/Spain/VC-FISABIO-119197/2023 | N | 1293 | Y | 9 | 20230905 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | N | 1293 | A | 2 | 20210424 |
| EPI_ISL_19614240 | NSP3 | hCoV-19/Sichuan/YACDC-CX155/2024 | N | 1293 | T | 151 | 20240603 |
| EPI_ISL_840352 | NSP3 | hCoV-19/England/OXON-F4670A/2020 | N | 1293 | V | 1 | 20201216 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | N | 1293 | del | 184 | 20240806 |
| EPI_ISL_19808684 | NSP3 | hCoV-19/Canada/ON-SHL-202500968/2025 | N | 1293 | S | 2108 | 20250224 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1293 | M | 1 | 20230108 |
| EPI_ISL_1178733 | NSP3 | hCoV-19/England/OXON-F67DF2/2021 | N | 1293 | C | 1 | 20210116 |
| EPI_ISL_19369881 | NSP3 | hCoV-19/USA/WA-GBW-GKISBBBD20057/2024 | E | 1294 | G | 425 | 20240820 |
| EPI_ISL_5333916 | NSP3 | hCoV-19/Sweden/UUH-000200064685/2021 | E | 1294 | insXX | 1 | 20210610 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1294 | N | 8 | 20220210 |
| EPI_ISL_17145175 | NSP3 | hCoV-19/USA/VT-CDCBI-CRSP_WK5WE322U3UPG2OG/2022 | E | 1294 | Z | 9 | 20220607 |
| EPI_ISL_13469813 | NSP3 | hCoV-19/Nigeria/NCDC-NR-GL-004796/2022 | E | 1294 | insXXXXXX | 1 | 20220331 |
| EPI_ISL_19704251 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00024/2022 | E | 1294 | Y | 5 | 20220606 |
| EPI_ISL_8882805 | NSP3 | hCoV-19/India/GA-NCCS-VH78087/2021 | E | 1294 | insYLEYstopVstopKP | 1 | 20210626 |
| EPI_ISL_8580308 | NSP3 | hCoV-19/Bulgaria/21BG-EU_012369_Pl118/2021 | E | 1294 | Q | 12 | 20211130 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | E | 1294 | insSYYstopETstopstop | 1 | 20230401 |
| EPI_ISL_18531515 | NSP3 | hCoV-19/Italy/LOM-69518822/2023 | E | 1294 | stop | 9 | 20231108 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | E | 1294 | I | 2 | 20220120 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | E | 1294 | P | 3 | 20221018 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | E | 1294 | del | 182 | 20240806 |
| EPI_ISL_19760576 | NSP3 | hCoV-19/Canada/AB-ABPHL-131277/2025 | E | 1294 | D | 396 | 20250209 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | E | 1294 | F | 7 | 20220724 |
| EPI_ISL_11394668 | NSP3 | hCoV-19/Brazil/CE-ITV-178833/2021 | E | 1294 | S | 3 | 20210316 |
| EPI_ISL_19732674 | NSP3 | hCoV-19/Canada/ON-PHL-202503434/2025 | E | 1294 | A | 70 | 20250203 |
| EPI_ISL_19266853 | NSP3 | hCoV-19/Hubei/HCDC-EZ5832/2024 | E | 1294 | K | 91 | 20240701 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | E | 1294 | R | 59 | 20240715 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | E | 1294 | insSNGC | 1 | 20210813 |
| EPI_ISL_17305013 | NSP3 | hCoV-19/USA/TX-HMH-M-126725/2023 | E | 1294 | T | 3 | 20230303 |
| EPI_ISL_5933493 | NSP3 | hCoV-19/Chile/LR-UACH-00407/2021 | E | 1294 | H | 2 | 20211027 |
| EPI_ISL_999070 | NSP3 | hCoV-19/England/OXON-F547BE/2021 | E | 1294 | M | 1 | 20210113 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | E | 1294 | C | 1 | 20220108 |
| EPI_ISL_1475636 | NSP3 | hCoV-19/England/OXON-F79F9D/2021 | E | 1294 | insY | 1 | 20210302 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | E | 1294 | L | 5 | 20221012 |
| EPI_ISL_19566571 | NSP3 | hCoV-19/Germany/BE-ChVirD24-23062/2024 | E | 1294 | V | 17 | 20241021 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | L | 1295 | A | 1 | 20220305 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | L | 1295 | N | 5 | 20221012 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | L | 1295 | W | 1 | 20220108 |
| EPI_ISL_840352 | NSP3 | hCoV-19/England/OXON-F4670A/2020 | L | 1295 | H | 1 | 20201216 |
| EPI_ISL_1051779 | NSP3 | hCoV-19/England/OXON-F642BA/2021 | L | 1295 | Y | 2 | 20210201 |
| EPI_ISL_2404761 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050921-705/2021 | L | 1295 | T | 1 | 20210509 |
| EPI_ISL_19527499 | NSP3 | hCoV-19/Spain/CT-HCB-4272/2024 | L | 1295 | del | 153 | 20240904 |
| EPI_ISL_18531516 | NSP3 | hCoV-19/Italy/LOM-69518432/2023 | L | 1295 | J | 7 | 20231115 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | L | 1295 | D | 3 | 20220207 |
| EPI_ISL_19145823 | NSP3 | hCoV-19/Taiwan/CDC-F92642/2024 | L | 1295 | S | 92 | 20240515 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | L | 1295 | C | 2 | 20210812 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | L | 1295 | R | 1 | 20210428 |
| EPI_ISL_16755936 | NSP3 | hCoV-19/USA/CA-GBW-H20-282-7438/2023 | L | 1295 | stop | 5 | 20230124 |
| EPI_ISL_14161570 | NSP3 | hCoV-19/Israel/SMC-7093591/2022 | L | 1295 | insFPGNKPTNFstopSLVDLFSKRTNLNVstopstopWTPKSAKC | 1 | 20220720 |
| EPI_ISL_19185828 | NSP3 | hCoV-19/Canada/QC-L00738558001/2024 | L | 1295 | I | 19 | 20240520 |
| EPI_ISL_19242610 | NSP3 | hCoV-19/USA/CA-SCPHL-24WGS00438/2024 | L | 1295 | V | 56 | 20240701 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | L | 1295 | insVPV | 1 | 20230217 |
| EPI_ISL_12175574 | NSP3 | hCoV-19/Russia/RYA-CRIE-S_7724080475/2022 | L | 1295 | K | 1 | 20220126 |
| EPI_ISL_19727633 | NSP3 | hCoV-19/USA/IL-RIPHL_15229_G/2025 | L | 1295 | F | 55 | 20250117 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | S | 1296 | M | 4 | 20210915 |
| EPI_ISL_7949461 | NSP3 | hCoV-19/USA/UT-UPHL-211218580559/2021 | S | 1296 | insIYYL | 1 | 20211021 |
| EPI_ISL_19026705 | NSP3 | hCoV-19/Canada/ON-PHL-202406629/2024 | S | 1296 | T | 13 | 20240324 |
| EPI_ISL_15884471 | NSP3 | hCoV-19/Russia/MOW-PMVL-DZ-20480327604/2021 | S | 1296 | insR | 1 | 20211213 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | S | 1296 | Q | 1 | 20221012 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | S | 1296 | H | 1 | 20210920 |
| EPI_ISL_18849165 | NSP3 | hCoV-19/USA/CA-CDPH-500131556/2023 | S | 1296 | C | 137 | 20231221 |
| EPI_ISL_19504141 | NSP3 | hCoV-19/Canada/AB-ABPHL-124255/2024 | S | 1296 | del | 295 | 20241001 |
| EPI_ISL_19773057 | NSP3 | hCoV-19/USA/GA-CDC-LC1134431/2025 | S | 1296 | Y | 54 | 20250224 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | S | 1296 | G | 5 | 20220726 |
| EPI_ISL_19825422 | NSP3 | hCoV-19/USA/NE-NPHL-RP252297/2025 | S | 1296 | F | 8935 | 20250404 |
| EPI_ISL_10063454 | NSP3 | hCoV-19/USA/LA-OD-7845726202/2022 | S | 1296 | K | 4 | 20220207 |
| EPI_ISL_19574070 | NSP3 | hCoV-19/USA/AZ-CDC-LC1125465/2024 | S | 1296 | A | 208 | 20241109 |
| EPI_ISL_14084601 | NSP3 | hCoV-19/Bahrain/22020122865/2022 | S | 1296 | insSG | 1 | 20220226 |
| EPI_ISL_19610321 | NSP3 | hCoV-19/Canada/AB-ABPHL-128419/2024 | S | 1296 | P | 346 | 20241201 |
| EPI_ISL_5087366 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46489/2020 | S | 1296 | D | 2 | 20200730 |
| EPI_ISL_19539567 | NSP3 | hCoV-19/Turkey/DEU-S45/2020 | S | 1296 | insITXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20200821 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | S | 1296 | stop | 4 | 20220120 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | S | 1296 | I | 4 | 20230401 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | S | 1296 | L | 49 | 20230401 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | S | 1296 | insCRSRXXstopISY | 1 | 20210920 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | S | 1296 | R | 2 | 20230217 |
| EPI_ISL_14217763 | NSP3 | hCoV-19/France/IDF-AphpSA-MB000878/2022 | S | 1296 | V | 3 | 20220718 |
| EPI_ISL_8556088 | NSP3 | hCoV-19/USA/NJ-CDC-IBX700314517545/2021 | S | 1296 | insLXX | 1 | 20211222 |
| EPI_ISL_19704251 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00024/2022 | S | 1296 | E | 3 | 20220606 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | S | 1296 | N | 8 | 20220724 |
| EPI_ISL_3794921 | NSP3 | hCoV-19/Sweden/2A40874730099/2021 | R | 1297 | insQIstopWLRMstopTIL | 4 | 20210414 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | R | 1297 | H | 5 | 20220227 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | R | 1297 | L | 53 | 20230401 |
| EPI_ISL_3794652 | NSP3 | hCoV-19/Sweden/6706225825/2021 | R | 1297 | insQIstopWLFMstopTIL | 1 | 20210407 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | R | 1297 | N | 6 | 20210310 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | R | 1297 | F | 2 | 20220726 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | R | 1297 | insQIstopWLLMstopTIL | 31 | 20210419 |
| EPI_ISL_19337826 | NSP3 | hCoV-19/Japan/FR062-0335/2024 | R | 1297 | del | 247 | 20240806 |
| EPI_ISL_5338857 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-55258/2021 | R | 1297 | insQFstopSYYstopETstopstopIIstop | 1 | 20210813 |
| EPI_ISL_6325054 | NSP3 | hCoV-19/Thailand/Khon Kaen_SEQ19469/2021 | R | 1297 | V | 4 | 20211025 |
| EPI_ISL_17372599 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2616/2023 | R | 1297 | insLA | 1 | 20230113 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | R | 1297 | E | 8 | 20220105 |
| EPI_ISL_19792848 | NSP3 | hCoV-19/USA/NY-PRL-250318_82B02/2025 | R | 1297 | S | 674 | 20250228 |
| EPI_ISL_19700362 | NSP3 | hCoV-19/Canada/AB-ABPHL-130894/2025 | R | 1297 | K | 184 | 20250111 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | R | 1297 | stop | 6 | 20230401 |
| EPI_ISL_19663022 | NSP3 | hCoV-19/Canada/ON-PHL-202426963/2024 | R | 1297 | G | 376 | 20241229 |
| EPI_ISL_840352 | NSP3 | hCoV-19/England/OXON-F4670A/2020 | R | 1297 | D | 1 | 20201216 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | R | 1297 | Q | 5 | 20230217 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | R | 1297 | insYstopVstopKPL | 3 | 20220105 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | R | 1297 | Y | 7 | 20230217 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | R | 1297 | C | 1 | 20210621 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | R | 1297 | T | 114 | 20240715 |
| EPI_ISL_19824323 | NSP3 | hCoV-19/South Korea/KDCA297316/2025 | R | 1297 | I | 1726 | 20250319 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 1297 | P | 1 | 20220210 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | R | 1297 | M | 3 | 20221018 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | V | 1298 | M | 46 | 20230401 |
| EPI_ISL_19337826 | NSP3 | hCoV-19/Japan/FR062-0335/2024 | V | 1298 | del | 235 | 20240806 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | V | 1298 | S | 8 | 20230401 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | V | 1298 | H | 19 | 20230624 |
| EPI_ISL_12145034 | NSP3 | hCoV-19/Turkey/HSGM-G8419/2022 | V | 1298 | E | 5 | 20220312 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | V | 1298 | Y | 5 | 20210915 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1298 | K | 2 | 20220210 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | V | 1298 | C | 1 | 20210326 |
| EPI_ISL_8373324 | NSP3 | hCoV-19/USA/AK-PHL16294/2021 | V | 1298 | insS | 7 | 20211206 |
| EPI_ISL_19831704 | NSP3 | hCoV-19/Luxembourg/LNS7663841/2025 | V | 1298 | I | 447 | 20250331 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | V | 1298 | T | 6 | 20230217 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | V | 1298 | Q | 15 | 20240715 |
| EPI_ISL_19817884 | NSP3 | hCoV-19/USA/NY-URMC-P3S1U925-1/2025 | V | 1298 | L | 881 | 20250110 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | V | 1298 | stop | 5 | 20220726 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | V | 1298 | W | 1 | 20210915 |
| EPI_ISL_19693224 | NSP3 | hCoV-19/Hong Kong/VB25017139/2025 | V | 1298 | A | 836 | 20250113 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | L | 1299 | T | 1 | 20220726 |
| EPI_ISL_19824658 | NSP3 | hCoV-19/USA/MI-MDHHS-SC45773/2025 | L | 1299 | I | 69 | 20250323 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | L | 1299 | G | 1 | 20220120 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | L | 1299 | stop | 6 | 20221018 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | L | 1299 | del | 87 | 20240806 |
| EPI_ISL_1051774 | NSP3 | hCoV-19/England/OXON-F64232/2021 | L | 1299 | A | 1 | 20210201 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | L | 1299 | Y | 3 | 20210812 |
| EPI_ISL_18591923 | NSP3 | hCoV-19/env/Germany/BY-LGL-6067556/2023 | L | 1299 | V | 81 | 20231115 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | L | 1299 | insEYstop | 1 | 20210915 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | L | 1299 | M | 3 | 20220108 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | L | 1299 | insstopWLLMstopTIstopSYYstopETstopIIstop | 1 | 20210802 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | L | 1299 | insstopWLLMstop | 1 | 20221201 |
| EPI_ISL_18978011 | NSP3 | hCoV-19/USA/CA-NSYMMPHL-NSYM8613/2024 | L | 1299 | S | 23 | 20240207 |
| EPI_ISL_18824361 | NSP3 | hCoV-19/Netherlands/GE-RIVM-137326/2024 | L | 1299 | F | 33 | 20240110 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | L | 1299 | E | 1 | 20210727 |
| EPI_ISL_17815805 | NSP3 | hCoV-19/Singapore/R40MR121/2023 | L | 1299 | J | 1 | 20230610 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | L | 1299 | H | 1 | 20230217 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | L | 1299 | C | 1 | 20240316 |
| EPI_ISL_6122620 | NSP3 | hCoV-19/USA/MD-IGS-52127503558A/2021 | L | 1299 | insGLKTLATHGLATVRVL | 7 | 20211002 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | G | 1300 | del | 84 | 20240806 |
| EPI_ISL_17744298 | NSP3 | hCoV-19/USA/MO-20MU9599NPS/2021 | G | 1300 | P | 1 | 20210813 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | G | 1300 | Y | 13 | 20220724 |
| EPI_ISL_19459290 | NSP3 | hCoV-19/India/MH-ICMR-NIV-24-2009/2024 | G | 1300 | stop | 64 | 20240715 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | G | 1300 | N | 20 | 20230624 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | G | 1300 | I | 2 | 20220305 |
| EPI_ISL_14217763 | NSP3 | hCoV-19/France/IDF-AphpSA-MB000878/2022 | G | 1300 | E | 8 | 20220718 |
| EPI_ISL_19829565 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022720_01/2025 | G | 1300 | S | 681 | 20250220 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | G | 1300 | insYstop | 3 | 20210310 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | G | 1300 | T | 2 | 20221201 |
| EPI_ISL_19721541 | NSP3 | hCoV-19/USA/WI-WSLH-2403362/2024 | G | 1300 | V | 181 | 20241214 |
| EPI_ISL_19373149 | NSP3 | hCoV-19/Netherlands/GE-RIVM-141064/2024 | G | 1300 | C | 994 | 20240808 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | G | 1300 | L | 47 | 20221018 |
| EPI_ISL_17489964 | NSP3 | hCoV-19/USA/NY-GBW-H10-013-1895/2023 | G | 1300 | R | 23 | 20230406 |
| EPI_ISL_19656587 | NSP3 | hCoV-19/South Africa/NICD-R09667/2024 | G | 1300 | D | 4182 | 20241211 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | G | 1300 | M | 3 | 20220105 |
| EPI_ISL_12787066 | NSP3 | hCoV-19/France/BFC-HMN-22042270399/2022 | G | 1300 | A | 10 | 20220410 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | G | 1300 | F | 4 | 20220120 |
| EPI_ISL_17372599 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2616/2023 | L | 1301 | Q | 3 | 20230113 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | L | 1301 | C | 4 | 20220131 |
| EPI_ISL_19672126 | NSP3 | hCoV-19/France/OCC-RELAB-HCL025000698901/2024 | L | 1301 | F | 2566 | 20241227 |
| EPI_ISL_17565058 | NSP3 | hCoV-19/France/PAC-HCL723000621701/2023 | L | 1301 | S | 69 | 20230417 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1301 | A | 21 | 20230624 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | L | 1301 | N | 2 | 20240316 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | L | 1301 | Y | 1 | 20210705 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | L | 1301 | I | 4 | 20221201 |
| EPI_ISL_14992385 | NSP3 | hCoV-19/Italy/VEN-IZSVe-22RS8308-8_RO/2022 | L | 1301 | V | 17 | 20220909 |
| EPI_ISL_14616525 | NSP3 | hCoV-19/France/IDF-AphpSA-CJ000881/2022 | L | 1301 | P | 2 | 20220724 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | L | 1301 | K | 4 | 20230401 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | L | 1301 | T | 5 | 20220721 |
| EPI_ISL_19762340 | NSP3 | hCoV-19/env/Germany/BY-LGL-6511750/2025 | L | 1301 | stop | 19 | 20250219 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | L | 1301 | del | 88 | 20240806 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 1301 | W | 37 | 20230101 |
| EPI_ISL_12918864 | NSP3 | hCoV-19/Japan/0419-59048/2022 | L | 1301 | M | 190 | 20220419 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | K | 1302 | Y | 2 | 20220305 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | K | 1302 | L | 60 | 20230401 |
| EPI_ISL_19802618 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11014/2025 | K | 1302 | E | 469 | 20250305 |
| EPI_ISL_18897424 | NSP3 | hCoV-19/Canada/QC-L00701307001/2024 | K | 1302 | I | 377 | 20240129 |
| EPI_ISL_19515716 | NSP3 | hCoV-19/Japan/FR050-0349/2024 | K | 1302 | T | 134 | 20241011 |
| EPI_ISL_8049913 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7119/2021 | K | 1302 | M | 1 | 20211126 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | K | 1302 | F | 2 | 20220726 |
| EPI_ISL_19268563 | NSP3 | hCoV-19/USA/CO-UM-G43S43F7/2024 | K | 1302 | Q | 74 | 20240604 |
| EPI_ISL_19409517 | NSP3 | hCoV-19/Hubei/HCDC-JZ6989/2024 | K | 1302 | N | 160 | 20240828 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | K | 1302 | stop | 5 | 20220105 |
| EPI_ISL_12829093 | NSP3 | hCoV-19/Spain/AS-252210281/2022 | K | 1302 | S | 2 | 20220511 |
| EPI_ISL_18421828 | NSP3 | hCoV-19/env/Ukraine/80638/2023 | K | 1302 | A | 3 | 20230918 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | K | 1302 | P | 6 | 20230401 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | K | 1302 | del | 94 | 20240806 |
| EPI_ISL_19463848 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4132277/2024 | K | 1302 | R | 380 | 20240926 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | K | 1302 | D | 5 | 20220506 |
| EPI_ISL_17372599 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2616/2023 | K | 1302 | G | 2 | 20230113 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1303 | G | 2 | 20220210 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1303 | insQXR | 1 | 20221012 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | T | 1303 | R | 7 | 20210802 |
| EPI_ISL_19462670 | NSP3 | hCoV-19/Spain/MC-HCUVA-20439066/2024 | T | 1303 | N | 470 | 20240912 |
| EPI_ISL_2903341 | NSP3 | hCoV-19/England/OXON-F89DFA/2021 | T | 1303 | M | 1 | 20210129 |
| EPI_ISL_1249143 | NSP3 | hCoV-19/England/OXON-F6DE44/2021 | T | 1303 | F | 1 | 20210210 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | T | 1303 | insN | 1 | 20220721 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | T | 1303 | W | 1 | 20220110 |
| EPI_ISL_14217763 | NSP3 | hCoV-19/France/IDF-AphpSA-MB000878/2022 | T | 1303 | H | 1 | 20220718 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | T | 1303 | V | 27 | 20230624 |
| EPI_ISL_11887823 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0797/2022 | T | 1303 | stop | 1 | 20220117 |
| EPI_ISL_19823443 | NSP3 | hCoV-19/Japan/FR021-0243/2025 | T | 1303 | A | 850 | 20250312 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | T | 1303 | del | 86 | 20240806 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | T | 1303 | insS | 1 | 20210812 |
| EPI_ISL_12192366 | NSP3 | hCoV-19/France/IDF-AphpSA-TH000674/2022 | T | 1303 | C | 1 | 20220130 |
| EPI_ISL_13370586 | NSP3 | hCoV-19/Brazil/RN-IB_158202/2022 | T | 1303 | insQCGL | 1 | 20220525 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | T | 1303 | L | 65 | 20230401 |
| EPI_ISL_19821974 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136170/2025 | T | 1303 | I | 10694 | 20250328 |
| EPI_ISL_19645533 | NSP3 | hCoV-19/Hubei/HCDC-YC7528/2024 | T | 1303 | S | 17 | 20241203 |
| EPI_ISL_17164259 | NSP3 | hCoV-19/South Korea/KDCA217116/2023 | T | 1303 | P | 81 | 20230219 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1303 | insP | 1 | 20230108 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1303 | K | 5 | 20230108 |
| EPI_ISL_11394668 | NSP3 | hCoV-19/Brazil/CE-ITV-178833/2021 | T | 1303 | insSLRKVstopSF | 1 | 20210316 |
| EPI_ISL_17797577 | NSP3 | hCoV-19/env/Germany/BY-LGL-5888033/2023 | L | 1304 | H | 6 | 20230515 |
| EPI_ISL_19458922 | NSP3 | hCoV-19/Spain/PV-HUD-70145465/2024 | L | 1304 | P | 63 | 20240930 |
| EPI_ISL_3033768 | NSP3 | hCoV-19/South Korea/KDCA6562/2021 | L | 1304 | E | 1 | 20210706 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | L | 1304 | insDGG | 1 | 20210705 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | L | 1304 | K | 4 | 20220131 |
| EPI_ISL_15389071 | NSP3 | hCoV-19/Morocco/FMP438/2021 | L | 1304 | C | 1 | 20211223 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | L | 1304 | N | 1 | 20210727 |
| EPI_ISL_19671389 | NSP3 | hCoV-19/Finland/THL-09735/2024 | L | 1304 | I | 404 | 20241205 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1304 | A | 20 | 20230624 |
| EPI_ISL_12829093 | NSP3 | hCoV-19/Spain/AS-252210281/2022 | L | 1304 | T | 4 | 20220511 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | L | 1304 | insL | 1 | 20210805 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | L | 1304 | del | 98 | 20240806 |
| EPI_ISL_19521308 | NSP3 | hCoV-19/Norway/7578/2024 | L | 1304 | V | 37 | 20241011 |
| EPI_ISL_11887814 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0780/2022 | L | 1304 | S | 1 | 20220108 |
| EPI_ISL_19295955 | NSP3 | hCoV-19/Japan/FR012-0317/2024 | L | 1304 | J | 12 | 20240716 |
| EPI_ISL_5484223 | NSP3 | hCoV-19/England/PHEC-3M0A4M07/2021 | L | 1304 | Y | 3 | 20211016 |
| EPI_ISL_18219257 | NSP3 | hCoV-19/Spain/CT-HUGTiP-C3R152/2023 | L | 1304 | R | 12 | 20230829 |
| EPI_ISL_4364206 | NSP3 | hCoV-19/USA/IL-CDC-ASC210162918/2021 | L | 1304 | insG | 1 | 20210721 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 1304 | M | 11 | 20230101 |
| EPI_ISL_19822526 | NSP3 | hCoV-19/Australia/QLD0x015491/2025 | L | 1304 | F | 8886 | 20250324 |
| EPI_ISL_19669254 | NSP3 | hCoV-19/USA/CA-PFZ02641/2024 | A | 1305 | S | 210 | 20241001 |
| EPI_ISL_2404761 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050921-705/2021 | A | 1305 | E | 2 | 20210509 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | A | 1305 | L | 27 | 20230401 |
| EPI_ISL_4333792 | NSP3 | hCoV-19/USA/GA-CDC-LC0242435/2021 | A | 1305 | insYPG | 1 | 20210830 |
| EPI_ISL_19827115 | NSP3 | hCoV-19/Chile/RM-ISPC-26321/2025 | A | 1305 | V | 17410 | 20250327 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | A | 1305 | Y | 3 | 20220623 |
| EPI_ISL_15500975 | NSP3 | hCoV-19/Switzerland/ZH-UZH-IMV-3ba66f47/2022 | A | 1305 | G | 12 | 20221011 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | A | 1305 | C | 10 | 20230401 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | A | 1305 | M | 41 | 20220703 |
| EPI_ISL_18842737 | NSP3 | hCoV-19/Sweden/AC-23COR006589/2023 | A | 1305 | F | 9 | 20231113 |
| EPI_ISL_19795890 | NSP3 | hCoV-19/Australia/WA16845/2025 | A | 1305 | T | 413 | 20250305 |
| EPI_ISL_19361514 | NSP3 | hCoV-19/env/Ukraine/84296/2023 | A | 1305 | P | 11 | 20231211 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | A | 1305 | I | 1 | 20220726 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | A | 1305 | del | 103 | 20240806 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 1305 | stop | 12 | 20230101 |
| EPI_ISL_19424512 | NSP3 | hCoV-19/Japan/FR035-0427/2024 | A | 1305 | D | 142 | 20240827 |
| EPI_ISL_5484223 | NSP3 | hCoV-19/England/PHEC-3M0A4M07/2021 | A | 1305 | R | 1 | 20211016 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | A | 1305 | K | 21 | 20230624 |
| EPI_ISL_12918864 | NSP3 | hCoV-19/Japan/0419-59048/2022 | A | 1305 | Q | 1 | 20220419 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | A | 1305 | insNYLEYstopVstop | 1 | 20220117 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | T | 1306 | insYLEYstopVstopKPL | 1 | 20210201 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | T | 1306 | Q | 2 | 20220726 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1306 | E | 3 | 20220210 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | T | 1306 | V | 7 | 20230418 |
| EPI_ISL_16034566 | NSP3 | hCoV-19/Vietnam/Binh_Duong-14/2021 | T | 1306 | insV | 1 | 20211020 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | T | 1306 | del | 120 | 20240806 |
| EPI_ISL_11394668 | NSP3 | hCoV-19/Brazil/CE-ITV-178833/2021 | T | 1306 | insVGKLX | 1 | 20210316 |
| EPI_ISL_17372391 | NSP3 | hCoV-19/India/TN-SPHL-2815/2023 | T | 1306 | P | 5 | 20230311 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | T | 1306 | D | 1 | 20210628 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 1306 | W | 1 | 20210424 |
| EPI_ISL_19546844 | NSP3 | hCoV-19/Spain/VC-CVA_ALIC-125746/2024 | T | 1306 | M | 10 | 20240703 |
| EPI_ISL_8049857 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6564/2021 | T | 1306 | G | 1 | 20211102 |
| EPI_ISL_19630846 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS101182/2024 | T | 1306 | A | 431 | 20241213 |
| EPI_ISL_17372599 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2616/2023 | T | 1306 | R | 2 | 20230113 |
| EPI_ISL_19507698 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293837/2024 | T | 1306 | F | 2 | 20241012 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | T | 1306 | Y | 9 | 20230401 |
| EPI_ISL_19786837 | NSP3 | hCoV-19/USA/CA-CDPH-6000021645/2025 | T | 1306 | N | 783 | 20250208 |
| EPI_ISL_19833052 | NSP3 | hCoV-19/France/ARA-HCL025058908801/2025 | T | 1306 | I | 21310 | 20250409 |
| EPI_ISL_1924455 | NSP3 | hCoV-19/USA/MI-CDC-QDX24042437/2021 | T | 1306 | insRSSC | 1 | 20210416 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | T | 1306 | insYLEYstopVstop | 1 | 20220703 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | T | 1306 | L | 21 | 20221201 |
| EPI_ISL_18118367 | NSP3 | hCoV-19/Spain/CL-43006/2023 | T | 1306 | S | 95 | 20230801 |
| EPI_ISL_12918864 | NSP3 | hCoV-19/Japan/0419-59048/2022 | T | 1306 | insI | 1 | 20220419 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1306 | K | 3 | 20231211 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | H | 1307 | S | 8 | 20230401 |
| EPI_ISL_19549464 | NSP3 | hCoV-19/Germany/BY-MVP-000025720/2024 | H | 1307 | L | 80 | 20241022 |
| EPI_ISL_19656712 | NSP3 | hCoV-19/Germany/BE-RKI-I-1146800/2024 | H | 1307 | R | 439 | 20241128 |
| EPI_ISL_19692172 | NSP3 | hCoV-19/New Zealand/25YA0181/2025 | H | 1307 | N | 118 | 20250102 |
| EPI_ISL_18533408 | NSP3 | hCoV-19/USA/NY-CDC-QDX86518817/2023 | H | 1307 | insMAAG | 1 | 20231017 |
| EPI_ISL_1309767 | NSP3 | hCoV-19/England/OXON-F76570/2021 | H | 1307 | insIstopCYVD | 1 | 20210215 |
| EPI_ISL_19583467 | NSP3 | hCoV-19/Japan/NCGM-01425/2022 | H | 1307 | E | 5 | 20220207 |
| EPI_ISL_19805249 | NSP3 | hCoV-19/Russia/SPE-RII-MH229768S/2025 | H | 1307 | Q | 617 | 20250318 |
| EPI_ISL_18442769 | NSP3 | hCoV-19/Sichuan/YBCDC-XGCX443/2023 | H | 1307 | insNFG | 1 | 20231012 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | H | 1307 | V | 23 | 20230401 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | H | 1307 | W | 1 | 20200730 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | H | 1307 | insLM | 1 | 20210805 |
| EPI_ISL_19788433 | NSP3 | hCoV-19/Japan/7GA-047/2025 | H | 1307 | D | 78 | 20250220 |
| EPI_ISL_15389071 | NSP3 | hCoV-19/Morocco/FMP438/2021 | H | 1307 | F | 1 | 20211223 |
| EPI_ISL_19583467 | NSP3 | hCoV-19/Japan/NCGM-01425/2022 | H | 1307 | insWW | 1 | 20220207 |
| EPI_ISL_9571909 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS_22_01391/2022 | H | 1307 | K | 2 | 20220120 |
| EPI_ISL_18255148 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-08/2023 | H | 1307 | M | 14 | 20230316 |
| EPI_ISL_7742107 | NSP3 | hCoV-19/USA/CA-CDC-FG-186740/2021 | H | 1307 | C | 7 | 20211206 |
| EPI_ISL_19827132 | NSP3 | hCoV-19/Chile/MA-ISPC-27076/2025 | H | 1307 | Y | 89434 | 20250330 |
| EPI_ISL_9445069 | NSP3 | hCoV-19/Germany/BW-RKI-I-476671/2022 | H | 1307 | P | 9 | 20220119 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | H | 1307 | I | 9 | 20230101 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | H | 1307 | del | 109 | 20240806 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | H | 1307 | insVNN | 1 | 20210424 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 1307 | T | 1 | 20220210 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | H | 1307 | A | 1 | 20210326 |
| EPI_ISL_19833199 | NSP3 | hCoV-19/Poland/Kce-45/2025 | G | 1308 | C | 245 | 20250411 |
| EPI_ISL_19217072 | NSP3 | hCoV-19/USA/IA-SHL-2454358/2024 | G | 1308 | V | 1445 | 20240620 |
| EPI_ISL_19691882 | NSP3 | hCoV-19/Canada/ON-PHL-202502205/2025 | G | 1308 | D | 151 | 20250116 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | G | 1308 | A | 7 | 20220506 |
| EPI_ISL_19829570 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022715_01/2025 | G | 1308 | S | 534 | 20250214 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | G | 1308 | stop | 4 | 20230401 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | G | 1308 | W | 9 | 20230401 |
| EPI_ISL_5230090 | NSP3 | hCoV-19/USA/TX-CDC-ASC210193831/2021 | G | 1308 | E | 1 | 20210819 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | G | 1308 | insstopLL | 1 | 20210816 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | G | 1308 | T | 4 | 20231211 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | G | 1308 | insstopWLL | 1 | 20221012 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | G | 1308 | R | 18 | 20220726 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | G | 1308 | K | 1 | 20220812 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 1308 | L | 49 | 20230101 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | G | 1308 | I | 2 | 20221012 |
| EPI_ISL_1178733 | NSP3 | hCoV-19/England/OXON-F67DF2/2021 | G | 1308 | P | 1 | 20210116 |
| EPI_ISL_15292694 | NSP3 | hCoV-19/India/GA-NCCS-563073855/2021 | G | 1308 | insstop | 8 | 20211105 |
| EPI_ISL_10606530 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-76133/2022 | G | 1308 | insstopLLL | 3 | 20220106 |
| EPI_ISL_1178733 | NSP3 | hCoV-19/England/OXON-F67DF2/2021 | G | 1308 | insSLETI | 1 | 20210116 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | G | 1308 | F | 3 | 20210827 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | G | 1308 | del | 110 | 20240806 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | G | 1308 | N | 22 | 20230624 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | G | 1308 | insILstopQ | 1 | 20210915 |
| EPI_ISL_5050390 | NSP3 | hCoV-19/Bangladesh/icddrb-GSB14-041/2021 | L | 1309 | insA | 2 | 20210908 |
| EPI_ISL_16453838 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-121859/2022 | L | 1309 | T | 3 | 20221230 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | L | 1309 | K | 6 | 20220506 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 1309 | N | 1 | 20220812 |
| EPI_ISL_15389071 | NSP3 | hCoV-19/Morocco/FMP438/2021 | L | 1309 | stop | 2 | 20211223 |
| EPI_ISL_7547079 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082421-1072/2021 | L | 1309 | insLstopLIMLS | 1 | 20210824 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | L | 1309 | C | 1 | 20230418 |
| EPI_ISL_19311535 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA11479-P0/2024 | L | 1309 | I | 110 | 20240722 |
| EPI_ISL_1178733 | NSP3 | hCoV-19/England/OXON-F67DF2/2021 | L | 1309 | Q | 1 | 20210116 |
| EPI_ISL_2404761 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050921-705/2021 | L | 1309 | Y | 1 | 20210509 |
| EPI_ISL_19583467 | NSP3 | hCoV-19/Japan/NCGM-01425/2022 | L | 1309 | A | 2 | 20220207 |
| EPI_ISL_19131292 | NSP3 | hCoV-19/env/Ukraine/83701/2023 | L | 1309 | F | 127 | 20231214 |
| EPI_ISL_1730447 | NSP3 | hCoV-19/Scotland/OXON-F7E1CF/2021 | L | 1309 | W | 1 | 20210318 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | L | 1309 | D | 1 | 20210727 |
| EPI_ISL_9681307 | NSP3 | hCoV-19/England/MILK-352B05C/2022 | L | 1309 | J | 4 | 20220202 |
| EPI_ISL_18739495 | NSP3 | hCoV-19/USA/CA-CDPH-6000017896/2023 | L | 1309 | S | 68 | 20231124 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | L | 1309 | E | 37 | 20210827 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | L | 1309 | M | 2 | 20221012 |
| EPI_ISL_19507698 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293837/2024 | L | 1309 | V | 78 | 20241012 |
| EPI_ISL_19368937 | NSP3 | hCoV-19/South Korea/KDCA294593/2024 | L | 1309 | del | 99 | 20240806 |
| EPI_ISL_19055773 | NSP3 | hCoV-19/Australia/SA1371186/2024 | A | 1310 | P | 25 | 20240402 |
| EPI_ISL_19826737 | NSP3 | hCoV-19/USA/MN-MDH-46600/2025 | A | 1310 | T | 1668 | 20250328 |
| EPI_ISL_19670634 | NSP3 | hCoV-19/USA/CT-DPH-1269824001/2025 | A | 1310 | S | 189 | 20250102 |
| EPI_ISL_18951777 | NSP3 | hCoV-19/USA/HI-H2327617/2024 | A | 1310 | N | 6 | 20240126 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | A | 1310 | Y | 36 | 20210803 |
| EPI_ISL_19797809 | NSP3 | hCoV-19/Brazil/MG-LACENMG-312305721/2025 | A | 1310 | D | 278 | 20250305 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | A | 1310 | stop | 5 | 20221012 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | A | 1310 | K | 4 | 20231211 |
| EPI_ISL_18969636 | NSP3 | hCoV-19/England/CLIMB-CM7YFZOE/2024 | A | 1310 | del | 111 | 20240229 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | A | 1310 | insS | 1 | 20210805 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | A | 1310 | C | 1 | 20200730 |
| EPI_ISL_13538482 | NSP3 | hCoV-19/Wales/QEUH-3E619CF/2022 | A | 1310 | M | 4 | 20220616 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | A | 1310 | insstopQstopSKEIRHII | 1 | 20221205 |
| EPI_ISL_18304508 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC43534/2023 | A | 1310 | I | 10 | 20230916 |
| EPI_ISL_19802668 | NSP3 | hCoV-19/Japan/FR055-0126/2025 | A | 1310 | V | 1995 | 20250302 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | A | 1310 | L | 66 | 20230401 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | A | 1310 | R | 2 | 20220811 |
| EPI_ISL_18371148 | NSP3 | hCoV-19/Turkey/HSGM-AA00590/2023 | A | 1310 | G | 14 | 20230902 |
| EPI_ISL_15389071 | NSP3 | hCoV-19/Morocco/FMP438/2021 | A | 1310 | Q | 1 | 20211223 |
| EPI_ISL_19586073 | NSP3 | hCoV-19/USA/NY-URMC-P0S1S470-1/2024 | A | 1311 | T | 448 | 20241021 |
| EPI_ISL_19583467 | NSP3 | hCoV-19/Japan/NCGM-01425/2022 | A | 1311 | K | 1 | 20220207 |
| EPI_ISL_19540443 | NSP3 | hCoV-19/USA/MN-MDH-43886/2024 | A | 1311 | G | 15 | 20241014 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | A | 1311 | R | 1 | 20220721 |
| EPI_ISL_2404761 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050921-705/2021 | A | 1311 | W | 1 | 20210509 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | A | 1311 | I | 4 | 20220105 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | A | 1311 | Q | 1 | 20210727 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | A | 1311 | del | 494 | 20250311 |
| EPI_ISL_19825422 | NSP3 | hCoV-19/USA/NE-NPHL-RP252297/2025 | A | 1311 | V | 7558 | 20250404 |
| EPI_ISL_18821132 | NSP3 | hCoV-19/Austria/AGES-1100465/2024 | A | 1311 | D | 27 | 20240114 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | A | 1311 | stop | 79 | 20230401 |
| EPI_ISL_18975319 | NSP3 | hCoV-19/USA/CA-LACPHL-AY05632/2024 | A | 1311 | S | 131 | 20240219 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1311 | N | 1 | 20220210 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | A | 1311 | F | 20 | 20220812 |
| EPI_ISL_3033768 | NSP3 | hCoV-19/South Korea/KDCA6562/2021 | A | 1311 | E | 1 | 20210706 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | A | 1311 | M | 1 | 20210915 |
| EPI_ISL_18668211 | NSP3 | hCoV-19/Italy/APU-IZSPB-PT8528/2023 | A | 1311 | P | 2 | 20231214 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | A | 1311 | L | 45 | 20230624 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | A | 1311 | C | 12 | 20230401 |
| EPI_ISL_5627364 | NSP3 | hCoV-19/France/IDF-HMN-21092080241/2021 | V | 1312 | insVC | 1 | 20210830 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | V | 1312 | E | 2 | 20220305 |
| EPI_ISL_11817585 | NSP3 | hCoV-19/Germany/NW-RKI-I-690111/2022 | V | 1312 | H | 1 | 20220322 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | V | 1312 | del | 672 | 20250311 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | V | 1312 | stop | 1 | 20200730 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | V | 1312 | M | 1 | 20210812 |
| EPI_ISL_887327 | NSP3 | hCoV-19/Germany/BAV-PL-virotum_3qu7/2020 | V | 1312 | insSLE | 1 | 20200327 |
| EPI_ISL_19824826 | NSP3 | hCoV-19/Spain/PV-HUD-39835800/2025 | V | 1312 | I | 1424 | 20250404 |
| EPI_ISL_19130501 | NSP3 | hCoV-19/South Korea/KDCA292663/2024 | V | 1312 | G | 11 | 20240413 |
| EPI_ISL_19507707 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10034788/2024 | V | 1312 | D | 18 | 20241003 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | V | 1312 | L | 91 | 20230401 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | V | 1312 | S | 2 | 20240316 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | V | 1312 | T | 6 | 20221205 |
| EPI_ISL_19776747 | NSP3 | hCoV-19/Spain/GA-SCQ_119613/2025 | V | 1312 | A | 947 | 20250130 |
| EPI_ISL_19683616 | NSP3 | hCoV-19/USA/MT-MTPHL-4164458/2024 | V | 1312 | F | 850 | 20241228 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 1312 | P | 1 | 20220812 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | V | 1312 | insstopN | 1 | 20210803 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | V | 1312 | C | 11 | 20230401 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | N | 1313 | T | 57 | 20240316 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | N | 1313 | M | 1 | 20210326 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | N | 1313 | C | 1 | 20220812 |
| EPI_ISL_19571005 | NSP3 | hCoV-19/USA/MN-UW-21082635660/2021 | N | 1313 | A | 4 | 20210826 |
| EPI_ISL_18233653 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48066/2023 | N | 1313 | Y | 8 | 20230809 |
| EPI_ISL_18226378 | NSP3 | hCoV-19/Japan/PG-555683/2023 | N | 1313 | K | 36 | 20230713 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | N | 1313 | I | 46 | 20230401 |
| EPI_ISL_9853465 | NSP3 | hCoV-19/Luxembourg/LNS1945431/2022 | N | 1313 | insY | 4 | 20220204 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | N | 1313 | L | 5 | 20221012 |
| EPI_ISL_19769266 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422246027/2025 | N | 1313 | H | 6 | 20250106 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | N | 1313 | G | 7 | 20231211 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | N | 1313 | stop | 15 | 20230401 |
| EPI_ISL_18531534 | NSP3 | hCoV-19/Italy/LOM-69518113/2023 | N | 1313 | R | 10 | 20231113 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | N | 1313 | V | 11 | 20230401 |
| EPI_ISL_17192242 | NSP3 | hCoV-19/Canada/ON-PHL-23-15709/2023 | N | 1313 | B | 6 | 20230302 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | N | 1313 | P | 1 | 20210803 |
| EPI_ISL_19658499 | NSP3 | hCoV-19/USA/NY-CDC-LC1126984/2024 | N | 1313 | S | 358 | 20241224 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | N | 1313 | del | 1943 | 20250311 |
| EPI_ISL_19812192 | NSP3 | hCoV-19/Germany/BY-MVP-000026363/2025 | N | 1313 | D | 260 | 20250302 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1313 | E | 36 | 20220210 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | S | 1314 | V | 3 | 20221012 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | S | 1314 | W | 1 | 20220105 |
| EPI_ISL_19810318 | NSP3 | hCoV-19/Japan/FR029-0014/2025 | S | 1314 | I | 157 | 20250309 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | S | 1314 | stop | 10 | 20230401 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | S | 1314 | A | 6 | 20220812 |
| EPI_ISL_19795863 | NSP3 | hCoV-19/New Zealand/25YA0729/2025 | S | 1314 | G | 4383 | 20250310 |
| EPI_ISL_15389071 | NSP3 | hCoV-19/Morocco/FMP438/2021 | S | 1314 | Y | 1 | 20211223 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | S | 1314 | F | 1 | 20210827 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | S | 1314 | K | 11 | 20231211 |
| EPI_ISL_17415045 | NSP3 | hCoV-19/South Korea/KDCA225561/2023 | S | 1314 | C | 20 | 20230316 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | S | 1314 | insCFANKH | 1 | 20210705 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | S | 1314 | M | 39 | 20230401 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | S | 1314 | del | 1997 | 20250311 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | S | 1314 | L | 17 | 20220812 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | S | 1314 | insNLG | 1 | 20210326 |
| EPI_ISL_19776581 | NSP3 | hCoV-19/Denmark/DCGC-691951/2025 | S | 1314 | R | 191 | 20250210 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | S | 1314 | P | 1 | 20240316 |
| EPI_ISL_18467143 | NSP3 | hCoV-19/England/CLIMB-CM7YEIPP/2023 | S | 1314 | T | 6 | 20231024 |
| EPI_ISL_19795233 | NSP3 | hCoV-19/USA/NY-CDC-LC1135193/2025 | S | 1314 | N | 440 | 20250311 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | S | 1314 | insPC | 35 | 20210419 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | V | 1315 | C | 13 | 20230401 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | V | 1315 | K | 6 | 20220131 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 1315 | Y | 40 | 20220812 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | V | 1315 | P | 3 | 20220623 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | V | 1315 | del | 2003 | 20250311 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1315 | N | 1 | 20210318 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | V | 1315 | W | 1 | 20240316 |
| EPI_ISL_19829044 | NSP3 | hCoV-19/USA/VA-CDC-LC1136693/2025 | V | 1315 | I | 2057 | 20250330 |
| EPI_ISL_18531534 | NSP3 | hCoV-19/Italy/LOM-69518113/2023 | V | 1315 | L | 106 | 20231113 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | V | 1315 | Q | 1 | 20220812 |
| EPI_ISL_19507707 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10034788/2024 | V | 1315 | G | 6 | 20241003 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1315 | T | 1 | 20201214 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | V | 1315 | S | 4 | 20220910 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | V | 1315 | R | 1 | 20200730 |
| EPI_ISL_19823216 | NSP3 | hCoV-19/USA/NY-SUNYQB-XL3199/2025 | V | 1315 | A | 336 | 20250322 |
| EPI_ISL_19534058 | NSP3 | hCoV-19/USA/CO-CDPHE-42384385/2024 | V | 1315 | F | 80 | 20241004 |
| EPI_ISL_19594764 | NSP3 | hCoV-19/Yunnan/YNCDC-1456/2024 | V | 1315 | D | 9 | 20240625 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | V | 1315 | M | 2 | 20210816 |
| EPI_ISL_16284089 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223160978/2022 | V | 1315 | insPWDTIANYAKPFLNKVTHGLAAVNSV | 1 | 20221112 |
| EPI_ISL_18643232 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69542934/2023 | P | 1316 | T | 64 | 20231207 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | P | 1316 | F | 1 | 20200730 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | P | 1316 | del | 2043 | 20250311 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | P | 1316 | insL | 1 | 20210807 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | P | 1316 | V | 5 | 20240316 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1316 | D | 3 | 20220210 |
| EPI_ISL_12934346 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011722-1566/2022 | P | 1316 | M | 1 | 20220117 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | P | 1316 | C | 3 | 20231211 |
| EPI_ISL_19772643 | NSP3 | hCoV-19/Canada/QC-L00849226001/2025 | P | 1316 | L | 1556 | 20250223 |
| EPI_ISL_19760249 | NSP3 | hCoV-19/USA/NJ-CDC-LC1133322/2025 | P | 1316 | S | 1932 | 20250216 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | P | 1316 | N | 1 | 20220812 |
| EPI_ISL_10606530 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-76133/2022 | P | 1316 | stop | 6 | 20220106 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | P | 1316 | A | 15 | 20220305 |
| EPI_ISL_839476 | NSP3 | hCoV-19/England/MILK-B5ADE7/2020 | P | 1316 | I | 1 | 20201106 |
| EPI_ISL_17344622 | NSP3 | hCoV-19/Israel/ICH-741197058/2023 | P | 1316 | R | 3 | 20230323 |
| EPI_ISL_19820059 | NSP3 | hCoV-19/Canada/ON-PHL-202504998/2025 | P | 1316 | H | 252 | 20250323 |
| EPI_ISL_5324100 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324675_CAM_IZSM_COLLI_TIGEM/2021 | P | 1316 | K | 2 | 20210916 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | P | 1316 | G | 11 | 20230401 |
| EPI_ISL_12321617 | NSP3 | hCoV-19/Turkey/HSGM-GS2551/2022 | W | 1317 | stop | 10 | 20220405 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | W | 1317 | I | 10 | 20230401 |
| EPI_ISL_3178747 | NSP3 | hCoV-19/England/OXON-FA5675/2021 | W | 1317 | insR | 2 | 20210716 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | W | 1317 | A | 3 | 20220812 |
| EPI_ISL_9617279 | NSP3 | hCoV-19/Luxembourg/LNS4415651/2022 | W | 1317 | insLX | 1 | 20220120 |
| EPI_ISL_19803765 | NSP3 | hCoV-19/USA/WI-WSLH-2500621/2025 | W | 1317 | R | 311 | 20250202 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | W | 1317 | K | 1 | 20220210 |
| EPI_ISL_19525125 | NSP3 | hCoV-19/USA/NE-NM_L382276050/2024 | W | 1317 | C | 130 | 20241026 |
| EPI_ISL_8979562 | NSP3 | hCoV-19/USA/NJ-CDC-IBX335208212495/2022 | W | 1317 | T | 2 | 20220105 |
| EPI_ISL_9853465 | NSP3 | hCoV-19/Luxembourg/LNS1945431/2022 | W | 1317 | F | 5 | 20220204 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | W | 1317 | S | 9 | 20240316 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | W | 1317 | E | 1 | 20210815 |
| EPI_ISL_19067317 | NSP3 | hCoV-19/USA/NY-URMC-O4S1N400-1/2024 | W | 1317 | L | 356 | 20240404 |
| EPI_ISL_17425911 | NSP3 | hCoV-19/India/MH-CSIR-2890/2023 | W | 1317 | Y | 5 | 20230401 |
| EPI_ISL_19799603 | NSP3 | hCoV-19/USA/TX-HMH-M-147729/2025 | W | 1317 | G | 21 | 20250311 |
| EPI_ISL_18531534 | NSP3 | hCoV-19/Italy/LOM-69518113/2023 | W | 1317 | Q | 2 | 20231113 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | W | 1317 | del | 2006 | 20250311 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | D | 1318 | L | 14 | 20230401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1318 | T | 1 | 20210318 |
| EPI_ISL_19044740 | NSP3 | hCoV-19/Italy/EMR-IZSLER-101993-001-01/2024 | D | 1318 | B | 36 | 20240325 |
| EPI_ISL_18531534 | NSP3 | hCoV-19/Italy/LOM-69518113/2023 | D | 1318 | M | 1 | 20231113 |
| EPI_ISL_2404761 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050921-705/2021 | D | 1318 | C | 1 | 20210509 |
| EPI_ISL_19821962 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136174/2025 | D | 1318 | N | 2557 | 20250328 |
| EPI_ISL_19483975 | NSP3 | hCoV-19/Netherlands/NB-RIVM-142741/2024 | D | 1318 | E | 244 | 20240913 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | D | 1318 | del | 2014 | 20250311 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | D | 1318 | R | 2 | 20240316 |
| EPI_ISL_19806757 | NSP3 | hCoV-19/Spain/CL-UCHV-49759/2025 | D | 1318 | Y | 136 | 20250107 |
| EPI_ISL_19767644 | NSP3 | hCoV-19/South Korea/KDCA297012/2025 | D | 1318 | G | 1764 | 20250211 |
| EPI_ISL_18444899 | NSP3 | hCoV-19/Singapore/R77MR150/2023 | D | 1318 | F | 44 | 20231020 |
| EPI_ISL_12582710 | NSP3 | hCoV-19/Turkey/HSGM-GS2175/2022 | D | 1318 | H | 4 | 20220401 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | D | 1318 | I | 14 | 20220910 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | D | 1318 | stop | 1 | 20221205 |
| EPI_ISL_9617279 | NSP3 | hCoV-19/Luxembourg/LNS4415651/2022 | D | 1318 | J | 1 | 20220120 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1318 | Q | 1 | 20220210 |
| EPI_ISL_8979562 | NSP3 | hCoV-19/USA/NJ-CDC-IBX335208212495/2022 | D | 1318 | insLEPPCRXX | 1 | 20220105 |
| EPI_ISL_18702856 | NSP3 | hCoV-19/Brazil/RJ-FIOCRUZ-12723/2023 | D | 1318 | V | 348 | 20231024 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | D | 1318 | S | 6 | 20220305 |
| EPI_ISL_19441906 | NSP3 | hCoV-19/USA/PA-CDC-LC1120213/2024 | D | 1318 | A | 221 | 20240906 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | T | 1319 | Y | 12 | 20230401 |
| EPI_ISL_19803436 | NSP3 | hCoV-19/USA/WI-WSLH-2500937/2025 | T | 1319 | I | 2122 | 20250228 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | T | 1319 | V | 1 | 20210106 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | T | 1319 | C | 3 | 20210915 |
| EPI_ISL_8812991 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111821-1258/2021 | T | 1319 | insCCstopstopCP | 5 | 20211118 |
| EPI_ISL_19770786 | NSP3 | hCoV-19/USA/ND-NDDH-26087/2025 | T | 1319 | A | 236 | 20250114 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1319 | R | 1 | 20201214 |
| EPI_ISL_18263497 | NSP3 | hCoV-19/Morocco/INH-1603/2021 | T | 1319 | Q | 1 | 20210304 |
| EPI_ISL_18531534 | NSP3 | hCoV-19/Italy/LOM-69518113/2023 | T | 1319 | S | 54 | 20231113 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | T | 1319 | stop | 10 | 20230401 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | T | 1319 | del | 2028 | 20250311 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | T | 1319 | L | 12 | 20220910 |
| EPI_ISL_5324100 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324675_CAM_IZSM_COLLI_TIGEM/2021 | T | 1319 | P | 3 | 20210916 |
| EPI_ISL_10606530 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-76133/2022 | T | 1319 | M | 4 | 20220106 |
| EPI_ISL_19620909 | NSP3 | hCoV-19/Japan/6GA-344/2024 | T | 1319 | N | 178 | 20240930 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | I | 1320 | A | 2 | 20240316 |
| EPI_ISL_19390941 | NSP3 | hCoV-19/Puerto Rico/CVL025798/2024 | I | 1320 | insANY | 1 | 20240722 |
| EPI_ISL_10813370 | NSP3 | hCoV-19/Pakistan/AKU-S23/2022 | I | 1320 | R | 3 | 20220116 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | I | 1320 | D | 1 | 20220812 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | I | 1320 | insFSQRG | 1 | 20210705 |
| EPI_ISL_18806815 | NSP3 | hCoV-19/Singapore/R5MQ73/2024 | I | 1320 | T | 52 | 20240115 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | I | 1320 | S | 4 | 20231211 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | I | 1320 | del | 2017 | 20250311 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | I | 1320 | stop | 11 | 20220910 |
| EPI_ISL_12146277 | NSP3 | hCoV-19/Turkey/HSGM-GS1653/2022 | I | 1320 | insSstopKKG | 1 | 20220401 |
| EPI_ISL_19227758 | NSP3 | hCoV-19/Singapore/R35MQ33/2024 | I | 1320 | J | 3 | 20240603 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | I | 1320 | Y | 11 | 20230401 |
| EPI_ISL_18444899 | NSP3 | hCoV-19/Singapore/R77MR150/2023 | I | 1320 | C | 39 | 20231020 |
| EPI_ISL_19812011 | NSP3 | hCoV-19/Australia/QLD0x015431/2025 | I | 1320 | V | 1443 | 20250319 |
| EPI_ISL_19452393 | NSP3 | hCoV-19/USA/MD-MDH-10674/2024 | I | 1320 | L | 80 | 20240830 |
| EPI_ISL_19594764 | NSP3 | hCoV-19/Yunnan/YNCDC-1456/2024 | I | 1320 | K | 2 | 20240625 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | I | 1320 | W | 1 | 20210705 |
| EPI_ISL_19833204 | NSP3 | hCoV-19/Poland/Kce-51/2025 | I | 1320 | M | 777 | 20250411 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | I | 1320 | P | 2 | 20221205 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | I | 1320 | F | 2 | 20220812 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | A | 1321 | insstopLCstopASSstopQSCstopY | 1 | 20200721 |
| EPI_ISL_9851463 | NSP3 | hCoV-19/Luxembourg/LNS7994614/2022 | A | 1321 | insAV | 1 | 20220124 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | A | 1321 | F | 5 | 20231211 |
| EPI_ISL_19334600 | NSP3 | hCoV-19/Egypt/CPHL-EGY24146/2024 | A | 1321 | D | 17 | 20240623 |
| EPI_ISL_19833021 | NSP3 | hCoV-19/Japan/FR022-0048/2025 | A | 1321 | V | 4262 | 20250310 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | A | 1321 | insstopstopCPL | 33 | 20210419 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | A | 1321 | I | 37 | 20230401 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | A | 1321 | N | 2 | 20220305 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 1321 | E | 2 | 20210318 |
| EPI_ISL_19831327 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56826/2025 | A | 1321 | T | 1294 | 20250324 |
| EPI_ISL_18263497 | NSP3 | hCoV-19/Morocco/INH-1603/2021 | A | 1321 | stop | 1 | 20210304 |
| EPI_ISL_19823359 | NSP3 | hCoV-19/USA/NY-SUNYQB-X401907/2025 | A | 1321 | del | 1221 | 20250307 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | A | 1321 | W | 1 | 20220812 |
| EPI_ISL_13239394 | NSP3 | hCoV-19/Germany/BY-RKI-I-845773/2022 | A | 1321 | G | 11 | 20220529 |
| EPI_ISL_13629445 | NSP3 | hCoV-19/Latvia/22116328NO/2022 | A | 1321 | P | 4 | 20220228 |
| EPI_ISL_18802038 | NSP3 | hCoV-19/Germany/BY-LGL-6105620/2023 | A | 1321 | L | 37 | 20231212 |
| EPI_ISL_18444899 | NSP3 | hCoV-19/Singapore/R77MR150/2023 | A | 1321 | C | 39 | 20231020 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | A | 1321 | Y | 5 | 20210915 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 1321 | M | 11 | 20230101 |
| EPI_ISL_19644962 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-22L-MM00018R/2024 | A | 1321 | S | 147 | 20241222 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | N | 1322 | A | 2 | 20220227 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | N | 1322 | M | 12 | 20230401 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | N | 1322 | V | 1 | 20220105 |
| EPI_ISL_19143504 | NSP3 | hCoV-19/Pakistan/GRH42631/2024 | N | 1322 | stop | 11 | 20240316 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | N | 1322 | C | 2 | 20210106 |
| EPI_ISL_19096043 | NSP3 | hCoV-19/Singapore/R22MQ72/2024 | N | 1322 | B | 19 | 20240422 |
| EPI_ISL_5235613 | NSP3 | hCoV-19/USA/TN-CDC-ASC210079269/2021 | N | 1322 | insCILT | 1 | 20210909 |
| EPI_ISL_19357184 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000366901/2024 | N | 1322 | S | 1586 | 20240801 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | N | 1322 | P | 3 | 20220812 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | N | 1322 | G | 35 | 20210419 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | N | 1322 | D | 953 | 20250311 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | N | 1322 | L | 7 | 20220117 |
| EPI_ISL_18802038 | NSP3 | hCoV-19/Germany/BY-LGL-6105620/2023 | N | 1322 | I | 24 | 20231212 |
| EPI_ISL_8077740 | NSP3 | hCoV-19/USA/AZ-CDC-ASC210536213/2021 | N | 1322 | insPR | 1 | 20211213 |
| EPI_ISL_18700001 | NSP3 | hCoV-19/USA/MN-CDC-VSX-A17283/2023 | N | 1322 | T | 148 | 20231206 |
| EPI_ISL_19413920 | NSP3 | hCoV-19/Russia/ROS-RII-MH195548S/2024 | N | 1322 | del | 226 | 20240730 |
| EPI_ISL_19598027 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-144175/2024 | N | 1322 | K | 81 | 20241119 |
| EPI_ISL_19468202 | NSP3 | hCoV-19/Peru/LIM-INS-50252/2024 | N | 1322 | F | 3 | 20240709 |
| EPI_ISL_18444899 | NSP3 | hCoV-19/Singapore/R77MR150/2023 | N | 1322 | Y | 21 | 20231020 |
| EPI_ISL_8284186 | NSP3 | hCoV-19/USA/CA-CDC-FG-210030/2021 | N | 1322 | H | 8 | 20211222 |
| EPI_ISL_13804479 | NSP3 | hCoV-19/Spain/MD-HULP-061293165/2022 | Y | 1323 | stop | 2 | 20220630 |
| EPI_ISL_18261256 | NSP3 | hCoV-19/USA/CA-HLX-STM-9QXH49MH9/2023 | Y | 1323 | D | 35 | 20230824 |
| EPI_ISL_12934346 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011722-1566/2022 | Y | 1323 | K | 1 | 20220117 |
| EPI_ISL_19821765 | NSP3 | hCoV-19/USA/NY-CDC-LC1136183/2025 | Y | 1323 | del | 1229 | 20250324 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | Y | 1323 | V | 3 | 20220812 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | Y | 1323 | insTNDK | 1 | 20210705 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | Y | 1323 | S | 23 | 20230217 |
| EPI_ISL_11912486 | NSP3 | hCoV-19/USA/CA-CDPH-3000323527/2022 | Y | 1323 | B | 1 | 20220131 |
| EPI_ISL_19507698 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293837/2024 | Y | 1323 | N | 16 | 20241012 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1323 | E | 1 | 20220210 |
| EPI_ISL_19620696 | NSP3 | hCoV-19/Canada/ON-PHL-202424410/2024 | Y | 1323 | H | 117 | 20241209 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | Y | 1323 | L | 27 | 20230401 |
| EPI_ISL_19824205 | NSP3 | hCoV-19/USA/IL-RIPHL_15512_G/2025 | Y | 1323 | C | 405 | 20250323 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | Y | 1323 | P | 2 | 20220812 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | Y | 1323 | I | 7 | 20220305 |
| EPI_ISL_18802038 | NSP3 | hCoV-19/Germany/BY-LGL-6105620/2023 | Y | 1323 | M | 73 | 20231212 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | Y | 1323 | F | 8 | 20220117 |
| EPI_ISL_18802038 | NSP3 | hCoV-19/Germany/BY-LGL-6105620/2023 | A | 1324 | L | 100 | 20231212 |
| EPI_ISL_19700281 | NSP3 | hCoV-19/Canada/AB-ABPHL-130767/2025 | A | 1324 | T | 845 | 20250115 |
| EPI_ISL_19803632 | NSP3 | hCoV-19/USA/WI-WSLH-2500840/2025 | A | 1324 | V | 1571 | 20250217 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | A | 1324 | Y | 33 | 20210419 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | A | 1324 | del | 123 | 20231022 |
| EPI_ISL_16057764 | NSP3 | hCoV-19/USA/IL-CDC-QDX43797637/2022 | A | 1324 | D | 4 | 20221117 |
| EPI_ISL_1077969 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-23439/2021 | A | 1324 | E | 1 | 20210113 |
| EPI_ISL_8812991 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111821-1258/2021 | A | 1324 | insstopLCstop | 2 | 20211118 |
| EPI_ISL_4634617 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ16240/2021 | A | 1324 | F | 3 | 20210911 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | A | 1324 | insstopLCstopAFSstopQ | 1 | 20210803 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 1324 | insEYstopVstop | 11 | 20230101 |
| EPI_ISL_14788474 | NSP3 | hCoV-19/Belgium/UZA-UA-8816696410/2022 | A | 1324 | P | 2 | 20220818 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | A | 1324 | K | 1 | 20230217 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | A | 1324 | C | 10 | 20230401 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | A | 1324 | insstopLITL | 1 | 20220120 |
| EPI_ISL_18375156 | NSP3 | hCoV-19/USA/NY-CDC-QDX84402398/2023 | A | 1324 | I | 6 | 20230825 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | A | 1324 | R | 4 | 20210326 |
| EPI_ISL_3793311 | NSP3 | hCoV-19/Sweden/15132408P/2021 | A | 1324 | insstopLC | 2 | 20210310 |
| EPI_ISL_19507707 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10034788/2024 | A | 1324 | S | 271 | 20241003 |
| EPI_ISL_16528140 | NSP3 | hCoV-19/Greece/45662/2022 | A | 1324 | G | 13 | 20221107 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | A | 1324 | insS | 1 | 20200729 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | A | 1324 | M | 3 | 20220812 |
| EPI_ISL_15389071 | NSP3 | hCoV-19/Morocco/FMP438/2021 | A | 1324 | stop | 7 | 20211223 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | A | 1324 | insW | 1 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1325 | V | 2 | 20220210 |
| EPI_ISL_15389071 | NSP3 | hCoV-19/Morocco/FMP438/2021 | K | 1325 | H | 4 | 20211223 |
| EPI_ISL_18802038 | NSP3 | hCoV-19/Germany/BY-LGL-6105620/2023 | K | 1325 | S | 138 | 20231212 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | K | 1325 | insS | 3 | 20231211 |
| EPI_ISL_19697588 | NSP3 | hCoV-19/Singapore/Y25R2MSC140/2025 | K | 1325 | E | 221 | 20250108 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | K | 1325 | stop | 15 | 20230401 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | K | 1325 | I | 2 | 20220305 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | K | 1325 | insY | 1 | 20210621 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | K | 1325 | Y | 1 | 20220812 |
| EPI_ISL_19831927 | NSP3 | hCoV-19/England/CLIMB-CM7YKHEO/2025 | K | 1325 | R | 1743 | 20250401 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | K | 1325 | D | 2 | 20220227 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | K | 1325 | P | 1 | 20220721 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | K | 1325 | del | 101 | 20231022 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | K | 1325 | L | 23 | 20230401 |
| EPI_ISL_8812991 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111821-1258/2021 | K | 1325 | A | 4 | 20211118 |
| EPI_ISL_18531534 | NSP3 | hCoV-19/Italy/LOM-69518113/2023 | K | 1325 | M | 13 | 20231113 |
| EPI_ISL_5511695 | NSP3 | hCoV-19/USA/ID-IBL-758631/2021 | K | 1325 | insF | 1 | 20210915 |
| EPI_ISL_19550896 | NSP3 | hCoV-19/Japan/FR055-0323/2024 | K | 1325 | T | 35 | 20241021 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | K | 1325 | insstopLCstop | 33 | 20210419 |
| EPI_ISL_19475513 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-2197/2024 | K | 1325 | N | 373 | 20240929 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | K | 1325 | C | 3 | 20210918 |
| EPI_ISL_18853196 | NSP3 | hCoV-19/South Korea/KDCA283370/2024 | K | 1325 | Q | 3 | 20240104 |
| EPI_ISL_19013678 | NSP3 | hCoV-19/Gansu/BYCDC038/2024 | P | 1326 | T | 125 | 20240310 |
| EPI_ISL_10606530 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-76133/2022 | P | 1326 | K | 5 | 20220106 |
| EPI_ISL_17427514 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2875/2023 | P | 1326 | A | 56 | 20230401 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | P | 1326 | N | 5 | 20230217 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | P | 1326 | D | 19 | 20230624 |
| EPI_ISL_17885331 | NSP3 | hCoV-19/Georgia/Tb-s7601/2023 | P | 1326 | R | 27 | 20230519 |
| EPI_ISL_8812990 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-111221-1251/2021 | P | 1326 | insLLLMVstopLLLIVSLGILstopLIMLSL | 5 | 20211112 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | P | 1326 | C | 1 | 20210803 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | P | 1326 | Q | 1 | 20210918 |
| EPI_ISL_19799618 | NSP3 | hCoV-19/USA/TX-HMH-M-147791/2025 | P | 1326 | insF | 40 | 20250314 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | P | 1326 | Y | 2 | 20220721 |
| EPI_ISL_8812991 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-111821-1258/2021 | P | 1326 | F | 5 | 20211118 |
| EPI_ISL_19788911 | NSP3 | hCoV-19/env/Germany/BY-LGL-6511732/2025 | P | 1326 | S | 2767 | 20250226 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1326 | E | 1 | 20220210 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | P | 1326 | I | 2 | 20211222 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | P | 1326 | V | 1 | 20220812 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | P | 1326 | del | 118 | 20231022 |
| EPI_ISL_19816564 | NSP3 | hCoV-19/South Korea/KDCA297187/2025 | P | 1326 | H | 312 | 20250307 |
| EPI_ISL_19829261 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11264/2025 | P | 1326 | L | 3445 | 20250324 |
| EPI_ISL_3636272 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ13948/2021 | P | 1326 | G | 5 | 20210806 |
| EPI_ISL_1309764 | NSP3 | hCoV-19/England/OXON-F76358/2021 | F | 1327 | W | 3 | 20210215 |
| EPI_ISL_19273199 | NSP3 | hCoV-19/USA/IL-RIPHL_123171_G/2024 | F | 1327 | I | 26 | 20240630 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | F | 1327 | insF | 3 | 20211219 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | F | 1327 | del | 87 | 20231022 |
| EPI_ISL_18371105 | NSP3 | hCoV-19/Turkey/HSGM-AA00537/2023 | F | 1327 | C | 16 | 20230713 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | F | 1327 | A | 11 | 20220812 |
| EPI_ISL_3636272 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ13948/2021 | F | 1327 | K | 1 | 20210806 |
| EPI_ISL_19363584 | NSP3 | hCoV-19/Japan/FR004-0318/2024 | F | 1327 | Y | 19 | 20240811 |
| EPI_ISL_19271002 | NSP3 | hCoV-19/USA/IA-SHL-2463049/2024 | F | 1327 | S | 180 | 20240710 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1327 | E | 1 | 20220210 |
| EPI_ISL_19782746 | NSP3 | hCoV-19/USA/MI-MDHHS-SC45737/2025 | F | 1327 | L | 1322 | 20250212 |
| EPI_ISL_8803748 | NSP3 | hCoV-19/India/MH-NCCS-55694/2021 | F | 1327 | stop | 2 | 20210803 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | F | 1327 | T | 3 | 20220812 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | F | 1327 | M | 1 | 20211222 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | F | 1327 | insstopQSCstop | 1 | 20210802 |
| EPI_ISL_16599968 | NSP3 | hCoV-19/USA/TX-HMH-123036/2023 | F | 1327 | insSstopQSCstop | 16 | 20230109 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | F | 1327 | N | 3 | 20231211 |
| EPI_ISL_19673798 | NSP3 | hCoV-19/Sichuan/ZGCDC-ZGXG2025003/2024 | F | 1327 | V | 42 | 20241212 |
| EPI_ISL_11093587 | NSP3 | hCoV-19/France/NAQ-IPP14843/2022 | L | 1328 | N | 1 | 20220221 |
| EPI_ISL_17454862 | NSP3 | hCoV-19/India/MH-CDFD-NNCVD23/2023 | L | 1328 | V | 36 | 20230327 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | L | 1328 | Y | 19 | 20230217 |
| EPI_ISL_17860468 | NSP3 | hCoV-19/USA/CA-CDPH-500113183/2023 | L | 1328 | R | 28 | 20230411 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | L | 1328 | stop | 1 | 20210621 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | L | 1328 | insA | 1 | 20210815 |
| EPI_ISL_19522300 | NSP3 | hCoV-19/Taiwan/CDC-W40572/2024 | L | 1328 | P | 149 | 20241014 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1328 | M | 19 | 20230624 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | L | 1328 | T | 4 | 20220305 |
| EPI_ISL_6675196 | NSP3 | hCoV-19/England/MILK-2A8D830/2021 | L | 1328 | J | 5 | 20211115 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | L | 1328 | del | 86 | 20231022 |
| EPI_ISL_19831970 | NSP3 | hCoV-19/Wales/CLIMB-CM7YFB43/2025 | L | 1328 | F | 14452 | 20250401 |
| EPI_ISL_1051779 | NSP3 | hCoV-19/England/OXON-F642BA/2021 | L | 1328 | E | 2 | 20210201 |
| EPI_ISL_8813037 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-102921-1223/2021 | L | 1328 | insLMVstopLLLIVSLGILstopLIMLSLFL | 1 | 20211029 |
| EPI_ISL_4591152 | NSP3 | hCoV-19/Turkey/HSGM-E5182/2021 | L | 1328 | H | 2 | 20210909 |
| EPI_ISL_18455241 | NSP3 | hCoV-19/env/Ukraine/80593/2023 | L | 1328 | S | 49 | 20230911 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | L | 1328 | C | 1 | 20220812 |
| EPI_ISL_19791362 | NSP3 | hCoV-19/Russia/SPE-RII-MH227697S/2025 | L | 1328 | I | 239 | 20250225 |
| EPI_ISL_19677069 | NSP3 | hCoV-19/Poland/63WSN2025_wsseol/2024 | N | 1329 | D | 3909 | 20241205 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | N | 1329 | G | 1 | 20210920 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | N | 1329 | insQS | 1 | 20210827 |
| EPI_ISL_17021243 | NSP3 | hCoV-19/Chile/TA-199237/2021 | N | 1329 | Q | 2 | 20211227 |
| EPI_ISL_19776855 | NSP3 | hCoV-19/Italy/PIE_IRCC_15802209/2025 | N | 1329 | B | 542 | 20250225 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | N | 1329 | stop | 44 | 20220623 |
| EPI_ISL_3178762 | NSP3 | hCoV-19/England/OXON-FA5790/2021 | N | 1329 | C | 2 | 20210714 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | N | 1329 | del | 105 | 20231022 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | N | 1329 | A | 2 | 20210827 |
| EPI_ISL_18373878 | NSP3 | hCoV-19/Norway/9610/2023 | N | 1329 | H | 6 | 20230914 |
| EPI_ISL_19828126 | NSP3 | hCoV-19/Australia/QLD0x0154BA/2025 | N | 1329 | K | 430 | 20250330 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | N | 1329 | V | 7 | 20220812 |
| EPI_ISL_19595360 | NSP3 | hCoV-19/Yunnan/YNCDC-1895/2024 | N | 1329 | Y | 58 | 20240730 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | N | 1329 | W | 1 | 20210918 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | N | 1329 | insstopSCstop | 1 | 20200730 |
| EPI_ISL_19799618 | NSP3 | hCoV-19/USA/TX-HMH-M-147791/2025 | N | 1329 | T | 286 | 20250314 |
| EPI_ISL_2357227 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-14857/2021 | N | 1329 | I | 1 | 20210519 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1329 | P | 1 | 20210318 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1329 | L | 9 | 20230101 |
| EPI_ISL_19829557 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022730_01/2025 | N | 1329 | S | 2442 | 20250217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1330 | C | 1 | 20201214 |
| EPI_ISL_16948364 | NSP3 | hCoV-19/Japan/PG-439908/2023 | K | 1330 | I | 34 | 20230123 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1330 | P | 2 | 20220210 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | K | 1330 | S | 15 | 20240628 |
| EPI_ISL_12906309 | NSP3 | hCoV-19/India/CT-ICMR-MCL_22_2136_9962/2022 | K | 1330 | stop | 4 | 20220113 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | K | 1330 | V | 3 | 20230217 |
| EPI_ISL_18468740 | NSP3 | hCoV-19/Bulgaria/2252/2022 | K | 1330 | L | 4 | 20221205 |
| EPI_ISL_19237879 | NSP3 | hCoV-19/Spain/AR-IACS_LaSARD-43037602/2024 | K | 1330 | N | 809 | 20240214 |
| EPI_ISL_16599968 | NSP3 | hCoV-19/USA/TX-HMH-123036/2023 | K | 1330 | Y | 19 | 20230109 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | K | 1330 | A | 2 | 20210918 |
| EPI_ISL_3421775 | NSP3 | hCoV-19/England/OXON-FA7AFF/2020 | K | 1330 | G | 1 | 20201228 |
| EPI_ISL_18977953 | NSP3 | hCoV-19/Germany/BE-ChVir46478/2024 | K | 1330 | Q | 66 | 20240123 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | K | 1330 | insL | 5 | 20230315 |
| EPI_ISL_19718599 | NSP3 | hCoV-19/New Zealand/25YA0424/2025 | K | 1330 | T | 261 | 20250202 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | K | 1330 | F | 1 | 20220305 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 1330 | M | 5 | 20230101 |
| EPI_ISL_19622858 | NSP3 | hCoV-19/New Zealand/24YA7526/2024 | K | 1330 | E | 326 | 20241111 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | K | 1330 | del | 104 | 20231022 |
| EPI_ISL_19656371 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000660301/2024 | K | 1330 | R | 578 | 20241220 |
| EPI_ISL_14562151 | NSP3 | hCoV-19/Mexico/QUE_CIAD-IMSS_202201090614/2022 | V | 1331 | D | 3 | 20220802 |
| EPI_ISL_19741684 | NSP3 | hCoV-19/Japan/FR302-0072/2025 | V | 1331 | A | 154 | 20250117 |
| EPI_ISL_8882815 | NSP3 | hCoV-19/India/GA-NCCS-VH78747/2021 | V | 1331 | S | 43 | 20210629 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | V | 1331 | E | 5 | 20220131 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | V | 1331 | insstopLL | 1 | 20210121 |
| EPI_ISL_14313316 | NSP3 | hCoV-19/USA/TX-HMH-M-110431/2022 | V | 1331 | Y | 2 | 20220801 |
| EPI_ISL_17275378 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45904/2023 | V | 1331 | K | 2 | 20230213 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | V | 1331 | insLVQ | 1 | 20210812 |
| EPI_ISL_19799618 | NSP3 | hCoV-19/USA/TX-HMH-M-147791/2025 | V | 1331 | L | 242 | 20250314 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | V | 1331 | C | 3 | 20240628 |
| EPI_ISL_11761832 | NSP3 | hCoV-19/Canada/ON-PHL-22-14672/2022 | V | 1331 | G | 6 | 20220320 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | V | 1331 | del | 100 | 20231022 |
| EPI_ISL_17021243 | NSP3 | hCoV-19/Chile/TA-199237/2021 | V | 1331 | R | 4 | 20211227 |
| EPI_ISL_16599968 | NSP3 | hCoV-19/USA/TX-HMH-123036/2023 | V | 1331 | stop | 18 | 20230109 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1331 | insstopLLLIVSLGILstop | 3 | 20230101 |
| EPI_ISL_1249089 | NSP3 | hCoV-19/England/OXON-F6CEBE/2021 | V | 1331 | M | 1 | 20210210 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | V | 1331 | insL | 5 | 20211219 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | V | 1331 | N | 2 | 20220812 |
| EPI_ISL_19795459 | NSP3 | hCoV-19/Brazil/SP-LEIAL4611/2025 | V | 1331 | I | 828 | 20250221 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | V | 1331 | T | 3 | 20230217 |
| EPI_ISL_19497924 | NSP3 | hCoV-19/Czech Republic/NRL-s680/2024 | V | 1331 | F | 1404 | 20241003 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | V | 1331 | Q | 3 | 20230217 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | V | 1332 | M | 2 | 20210920 |
| EPI_ISL_16599968 | NSP3 | hCoV-19/USA/TX-HMH-123036/2023 | V | 1332 | H | 18 | 20230109 |
| EPI_ISL_19409462 | NSP3 | hCoV-19/Hubei/HCDC-HG6952/2024 | V | 1332 | D | 9 | 20240822 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 1332 | R | 2 | 20220812 |
| EPI_ISL_984265 | NSP3 | hCoV-19/Belgium/UZA-UA-7094/2021 | V | 1332 | insI | 1 | 20210122 |
| EPI_ISL_17022645 | NSP3 | hCoV-19/Chile/VS-116418/2021 | V | 1332 | E | 1 | 20210620 |
| EPI_ISL_19816801 | NSP3 | hCoV-19/Slovenia/IMI-V0-1824/2025 | V | 1332 | A | 151 | 20250317 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | V | 1332 | insstopQDCstop | 1 | 20211222 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1332 | T | 1 | 20210318 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | V | 1332 | K | 1 | 20230418 |
| EPI_ISL_10924594 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11813/2022 | V | 1332 | P | 10 | 20220228 |
| EPI_ISL_16698021 | NSP3 | hCoV-19/Xinjiang/BTCDC-75/2023 | V | 1332 | G | 9 | 20230122 |
| EPI_ISL_8694871 | NSP3 | hCoV-19/USA/AL-ADPH-ADPH_1168/2021 | V | 1332 | C | 44 | 20211228 |
| EPI_ISL_19799618 | NSP3 | hCoV-19/USA/TX-HMH-M-147791/2025 | V | 1332 | L | 242 | 20250314 |
| EPI_ISL_10924594 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11813/2022 | V | 1332 | insW | 10 | 20220228 |
| EPI_ISL_19812078 | NSP3 | hCoV-19/USA/CO-CDPHE-43254862/2025 | V | 1332 | I | 1174 | 20250320 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | V | 1332 | S | 7 | 20221205 |
| EPI_ISL_19738497 | NSP3 | hCoV-19/Chile/ML-5298/2025 | V | 1332 | F | 390 | 20250111 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | V | 1332 | del | 99 | 20231022 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | V | 1332 | Y | 4 | 20220104 |
| EPI_ISL_19351716 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242623/2024 | V | 1332 | stop | 4 | 20240628 |
| EPI_ISL_17021243 | NSP3 | hCoV-19/Chile/TA-199237/2021 | S | 1333 | A | 2 | 20211227 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | S | 1333 | L | 4 | 20210812 |
| EPI_ISL_19572789 | NSP3 | hCoV-19/Spain/AS-HUCA-232485417/2024 | S | 1333 | I | 957 | 20241118 |
| EPI_ISL_19286929 | NSP3 | hCoV-19/USA/TX-HMH-M-141550/2024 | S | 1333 | T | 49 | 20240612 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | S | 1333 | C | 19 | 20230217 |
| EPI_ISL_19707286 | NSP3 | hCoV-19/Canada/ON-KHS-00385-v1/2025 | S | 1333 | N | 536 | 20250122 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | S | 1333 | Y | 3 | 20210905 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | S | 1333 | K | 5 | 20230418 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | S | 1333 | V | 13 | 20230401 |
| EPI_ISL_10924594 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11813/2022 | S | 1333 | D | 18 | 20220228 |
| EPI_ISL_17022645 | NSP3 | hCoV-19/Chile/VS-116418/2021 | S | 1333 | E | 1 | 20210620 |
| EPI_ISL_9368444 | NSP3 | hCoV-19/France/PDL-HMN-22012130376/2021 | S | 1333 | P | 1 | 20211213 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | S | 1333 | F | 1 | 20210827 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | S | 1333 | Q | 12 | 20230315 |
| EPI_ISL_1051779 | NSP3 | hCoV-19/England/OXON-F642BA/2021 | S | 1333 | insW | 1 | 20210201 |
| EPI_ISL_19826734 | NSP3 | hCoV-19/USA/MN-MDH-46597/2025 | S | 1333 | G | 2025 | 20250330 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | S | 1333 | stop | 41 | 20220801 |
| EPI_ISL_19507707 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10034788/2024 | S | 1333 | R | 18 | 20241003 |
| EPI_ISL_14420442 | NSP3 | hCoV-19/Germany/SN-RKI-I-943661/2022 | S | 1333 | insT | 1 | 20220303 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | S | 1333 | del | 106 | 20231211 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | T | 1334 | L | 35 | 20230624 |
| EPI_ISL_17275378 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45904/2023 | T | 1334 | G | 1 | 20230213 |
| EPI_ISL_16599968 | NSP3 | hCoV-19/USA/TX-HMH-123036/2023 | T | 1334 | Y | 20 | 20230109 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | T | 1334 | insYstopH | 7 | 20210905 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | T | 1334 | Q | 6 | 20230401 |
| EPI_ISL_18293299 | NSP3 | hCoV-19/South Korea/KDCA263467/2023 | T | 1334 | V | 9 | 20230827 |
| EPI_ISL_1051779 | NSP3 | hCoV-19/England/OXON-F642BA/2021 | T | 1334 | F | 1 | 20210201 |
| EPI_ISL_8694871 | NSP3 | hCoV-19/USA/AL-ADPH-ADPH_1168/2021 | T | 1334 | N | 8 | 20211228 |
| EPI_ISL_19676737 | NSP3 | hCoV-19/Australia/QLD0x01507A/2025 | T | 1334 | A | 733 | 20250106 |
| EPI_ISL_19381584 | NSP3 | hCoV-19/Spain/AR-HUMS-02775739/2023 | T | 1334 | S | 46 | 20231018 |
| EPI_ISL_2190467 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-31831/2021 | T | 1334 | insstopLHGVstop | 1 | 20210310 |
| EPI_ISL_11514258 | NSP3 | hCoV-19/Brazil/PA-ITV-3483/2021 | T | 1334 | H | 3 | 20211021 |
| EPI_ISL_19605376 | NSP3 | hCoV-19/USA/MN-MDH-44321/2024 | T | 1334 | K | 41 | 20241121 |
| EPI_ISL_18927251 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69596577/2024 | T | 1334 | P | 3 | 20240131 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1334 | del | 119 | 20231211 |
| EPI_ISL_18936167 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00122/2023 | T | 1334 | stop | 9 | 20230418 |
| EPI_ISL_19286929 | NSP3 | hCoV-19/USA/TX-HMH-M-141550/2024 | T | 1334 | M | 4 | 20240612 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | T | 1334 | insLLTstopLHGVstop | 3 | 20230401 |
| EPI_ISL_19552932 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08895/2024 | T | 1334 | R | 5 | 20241106 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | T | 1334 | I | 9813 | 20250329 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1334 | E | 1 | 20220210 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | T | 1334 | C | 2 | 20230217 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | T | 1335 | C | 6 | 20220721 |
| EPI_ISL_3421775 | NSP3 | hCoV-19/England/OXON-FA7AFF/2020 | T | 1335 | F | 1 | 20201228 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1335 | H | 1 | 20201214 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1335 | del | 114 | 20231211 |
| EPI_ISL_19795302 | NSP3 | hCoV-19/USA/AL-CDC-LC1135504/2025 | T | 1335 | I | 8273 | 20250312 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | T | 1335 | R | 3 | 20230217 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | T | 1335 | S | 52 | 20230624 |
| EPI_ISL_19819778 | NSP3 | hCoV-19/Wales/CLIMB-CM7YJBC9/2025 | T | 1335 | A | 47 | 20250324 |
| EPI_ISL_17022645 | NSP3 | hCoV-19/Chile/VS-116418/2021 | T | 1335 | G | 1 | 20210620 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 1335 | E | 2 | 20220812 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | T | 1335 | N | 21 | 20230217 |
| EPI_ISL_8694871 | NSP3 | hCoV-19/USA/AL-ADPH-ADPH_1168/2021 | T | 1335 | Y | 1 | 20211228 |
| EPI_ISL_18927251 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69596577/2024 | T | 1335 | P | 5 | 20240131 |
| EPI_ISL_427289 | NSP3 | hCoV-19/USA/OH-OSUP0014/2020 | T | 1335 | Q | 1 | 20200331 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1335 | V | 2 | 20210318 |
| EPI_ISL_19286929 | NSP3 | hCoV-19/USA/TX-HMH-M-141550/2024 | T | 1335 | L | 25 | 20240612 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | T | 1335 | stop | 2 | 20210918 |
| EPI_ISL_6250460 | NSP3 | hCoV-19/Chile/LR-UACH-00583/2021 | T | 1336 | Q | 2 | 20211102 |
| EPI_ISL_12934346 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011722-1566/2022 | T | 1336 | L | 6 | 20220117 |
| EPI_ISL_19781170 | NSP3 | hCoV-19/Poland/113WSN2025_wsseol/2025 | T | 1336 | N | 127 | 20250114 |
| EPI_ISL_19831756 | NSP3 | hCoV-19/Luxembourg/LNS4164821/2025 | T | 1336 | I | 9849 | 20250317 |
| EPI_ISL_998990 | NSP3 | hCoV-19/England/OXON-F53773/2021 | T | 1336 | F | 1 | 20210103 |
| EPI_ISL_11514258 | NSP3 | hCoV-19/Brazil/PA-ITV-3483/2021 | T | 1336 | D | 2 | 20211021 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | T | 1336 | Y | 12 | 20210905 |
| EPI_ISL_19286929 | NSP3 | hCoV-19/USA/TX-HMH-M-141550/2024 | T | 1336 | V | 42 | 20240612 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | T | 1336 | insstopLH | 9 | 20230315 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | T | 1336 | C | 3 | 20230217 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | T | 1336 | E | 21 | 20230624 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | T | 1336 | stop | 1 | 20210805 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1336 | del | 102 | 20231211 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | T | 1336 | S | 13 | 20230217 |
| EPI_ISL_18594937 | NSP3 | hCoV-19/USA/MN-MDH-37883/2023 | T | 1336 | A | 122 | 20231113 |
| EPI_ISL_18927251 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69596577/2024 | T | 1336 | P | 2 | 20240131 |
| EPI_ISL_8694871 | NSP3 | hCoV-19/USA/AL-ADPH-ADPH_1168/2021 | T | 1336 | M | 1 | 20211228 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | T | 1336 | insATELH | 1 | 20200729 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | T | 1336 | H | 5 | 20220117 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | N | 1337 | del | 90 | 20231022 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | N | 1337 | Q | 46 | 20230624 |
| EPI_ISL_19167505 | NSP3 | hCoV-19/Hubei/HCDC-JZ5234/2024 | N | 1337 | H | 8 | 20240515 |
| EPI_ISL_8694871 | NSP3 | hCoV-19/USA/AL-ADPH-ADPH_1168/2021 | N | 1337 | P | 1 | 20211228 |
| EPI_ISL_950839 | NSP3 | hCoV-19/England/OXON-F4549B/2020 | N | 1337 | C | 2 | 20201222 |
| EPI_ISL_18603888 | NSP3 | hCoV-19/Netherlands/NH-AUMC-001701/2023 | N | 1337 | Y | 77 | 20231202 |
| EPI_ISL_19812003 | NSP3 | hCoV-19/Australia/QLD0x01543A/2025 | N | 1337 | S | 902 | 20250318 |
| EPI_ISL_19512675 | NSP3 | hCoV-19/Singapore/R58MQ82/2024 | N | 1337 | B | 16 | 20241018 |
| EPI_ISL_17275378 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45904/2023 | N | 1337 | E | 4 | 20230213 |
| EPI_ISL_19507707 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10034788/2024 | N | 1337 | I | 2 | 20241003 |
| EPI_ISL_19413576 | NSP3 | hCoV-19/Netherlands/OV-RIVM-141279/2024 | N | 1337 | D | 249 | 20240826 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | N | 1337 | R | 1 | 20230217 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1337 | L | 8 | 20230101 |
| EPI_ISL_18854325 | NSP3 | hCoV-19/Japan/PG-590979/2024 | N | 1337 | T | 47 | 20240113 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | N | 1337 | G | 16 | 20230315 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | N | 1337 | stop | 2 | 20210114 |
| EPI_ISL_19634215 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09341/2024 | N | 1337 | K | 118 | 20241203 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | N | 1337 | F | 8 | 20230401 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | I | 1338 | del | 47 | 20231022 |
| EPI_ISL_17815951 | NSP3 | hCoV-19/Singapore/R41MR109/2023 | I | 1338 | J | 9 | 20230612 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | I | 1338 | insS | 1 | 20210815 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | I | 1338 | N | 2 | 20220812 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1338 | D | 1 | 20210318 |
| EPI_ISL_19812676 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20843/2024 | I | 1338 | R | 4 | 20241029 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | I | 1338 | stop | 5 | 20220623 |
| EPI_ISL_19588594 | NSP3 | hCoV-19/USA/NJ-PHEL-V24012485/2024 | I | 1338 | L | 221 | 20241009 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | I | 1338 | insA | 1 | 20230401 |
| EPI_ISL_19780332 | NSP3 | hCoV-19/Gansu/BYCDC-026/2025 | I | 1338 | M | 322 | 20250226 |
| EPI_ISL_19688377 | NSP3 | hCoV-19/Canada/SK-RRPL-762256/2024 | I | 1338 | T | 207 | 20241227 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | I | 1338 | F | 7 | 20230217 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | I | 1338 | G | 1 | 20210812 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | I | 1338 | insLstopLIM | 1 | 20210121 |
| EPI_ISL_16941304 | NSP3 | hCoV-19/Germany/BW-RKI-I-1105936/2023 | I | 1338 | K | 24 | 20230208 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | I | 1338 | Y | 13 | 20220801 |
| EPI_ISL_3079233 | NSP3 | hCoV-19/England/OXON-FA3BA5/2021 | I | 1338 | C | 1 | 20210707 |
| EPI_ISL_19603372 | NSP3 | hCoV-19/Chile/ML-86013/2024 | I | 1338 | V | 395 | 20241028 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | I | 1338 | H | 1 | 20210114 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | I | 1338 | S | 5 | 20210827 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | I | 1338 | insTT | 1 | 20230217 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | V | 1339 | K | 4 | 20210915 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | V | 1339 | R | 20 | 20230624 |
| EPI_ISL_18436050 | NSP3 | hCoV-19/Italy/LOM-69495602/2023 | V | 1339 | del | 58 | 20231022 |
| EPI_ISL_17821695 | NSP3 | hCoV-19/Brazil/RS-LMM74101/2022 | V | 1339 | T | 3 | 20221220 |
| EPI_ISL_19286929 | NSP3 | hCoV-19/USA/TX-HMH-M-141550/2024 | V | 1339 | L | 60 | 20240612 |
| EPI_ISL_14552969 | NSP3 | hCoV-19/USA/TX-HMH-M-111762/2022 | V | 1339 | Y | 9 | 20220809 |
| EPI_ISL_10838224 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-89485/2021 | V | 1339 | insYGVstop | 1 | 20211224 |
| EPI_ISL_11355279 | NSP3 | hCoV-19/France/GES-ChNa-210064038801/2021 | V | 1339 | insHGVstop | 2 | 20210806 |
| EPI_ISL_19829485 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022692_01/2025 | V | 1339 | G | 240 | 20250210 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | V | 1339 | stop | 16 | 20230315 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | V | 1339 | Q | 1 | 20200608 |
| EPI_ISL_19703934 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09932/2025 | V | 1339 | A | 135 | 20250117 |
| EPI_ISL_13054365 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-97699/2022 | V | 1339 | D | 2 | 20220513 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | V | 1339 | C | 1 | 20230217 |
| EPI_ISL_19716824 | NSP3 | hCoV-19/USA/NJ-CDC-LC1130068/2025 | V | 1339 | I | 5165 | 20250123 |
| EPI_ISL_19537806 | NSP3 | hCoV-19/Canada/ON-PHL-202419612/2024 | V | 1339 | F | 227 | 20241025 |
| EPI_ISL_950839 | NSP3 | hCoV-19/England/OXON-F4549B/2020 | T | 1340 | insLL | 1 | 20201222 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | T | 1340 | M | 2 | 20230217 |
| EPI_ISL_15937987 | NSP3 | hCoV-19/Vietnam/12158/2022 | T | 1340 | stop | 1 | 20221012 |
| EPI_ISL_18927251 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69596577/2024 | T | 1340 | P | 5 | 20240131 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1340 | W | 1 | 20201214 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | T | 1340 | S | 6 | 20230217 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | T | 1340 | H | 3 | 20210806 |
| EPI_ISL_19535920 | NSP3 | hCoV-19/Japan/FR004-0544/2024 | T | 1340 | A | 405 | 20241027 |
| EPI_ISL_17226193 | NSP3 | hCoV-19/USA/CA-ASC-210885359/2023 | T | 1340 | V | 3 | 20230305 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | T | 1340 | N | 2 | 20210622 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1340 | del | 61 | 20231211 |
| EPI_ISL_10924600 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11595/2022 | T | 1340 | Q | 1 | 20220226 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 1340 | F | 2 | 20220812 |
| EPI_ISL_1051779 | NSP3 | hCoV-19/England/OXON-F642BA/2021 | T | 1340 | C | 2 | 20210201 |
| EPI_ISL_19739639 | NSP3 | hCoV-19/USA/MD-CDC-LC1131896/2025 | T | 1340 | I | 1941 | 20250207 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | T | 1340 | insPGLPGTIL | 1 | 20210705 |
| EPI_ISL_16258494 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2033/2022 | T | 1340 | L | 3 | 20220812 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | T | 1340 | insS | 1 | 20211222 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1340 | R | 2 | 20210318 |
| EPI_ISL_19554222 | NSP3 | hCoV-19/USA/NY-PRL-241113_81A09/2024 | T | 1340 | K | 157 | 20241103 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | T | 1340 | G | 1 | 20210106 |
| EPI_ISL_18237885 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000188576SP/2022 | R | 1341 | insCLNRV | 1 | 20220726 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | R | 1341 | M | 2 | 20230217 |
| EPI_ISL_19771486 | NSP3 | hCoV-19/USA/NY-PRL-250304_82C10/2025 | R | 1341 | Q | 1684 | 20250218 |
| EPI_ISL_18382501 | NSP3 | hCoV-19/Japan/PG-571848/2023 | R | 1341 | G | 3 | 20230817 |
| EPI_ISL_14392780 | NSP3 | hCoV-19/India/MH-NCCS-2748700655982/2021 | R | 1341 | N | 2 | 20211110 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | R | 1341 | stop | 6 | 20230401 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | R | 1341 | del | 88 | 20231211 |
| EPI_ISL_1833089 | NSP3 | hCoV-19/England/OXON-F80F57/2021 | R | 1341 | D | 1 | 20210106 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | R | 1341 | H | 1 | 20210915 |
| EPI_ISL_19729133 | NSP3 | hCoV-19/Singapore/Y25R7MSC51/2025 | R | 1341 | W | 9069 | 20250211 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | R | 1341 | I | 8 | 20230401 |
| EPI_ISL_16599968 | NSP3 | hCoV-19/USA/TX-HMH-123036/2023 | R | 1341 | P | 46 | 20230109 |
| EPI_ISL_15089910 | NSP3 | hCoV-19/USA/TX-HMH-M-115780/2022 | R | 1341 | insXFKP | 1 | 20220912 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | R | 1341 | T | 4 | 20220812 |
| EPI_ISL_14995625 | NSP3 | hCoV-19/USA/NC-WFSM-1085-6965/2022 | R | 1341 | insFKP | 5 | 20220908 |
| EPI_ISL_17275378 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45904/2023 | R | 1341 | K | 11 | 20230213 |
| EPI_ISL_11514258 | NSP3 | hCoV-19/Brazil/PA-ITV-3483/2021 | R | 1341 | Y | 5 | 20211021 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | R | 1341 | V | 19 | 20230315 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | R | 1341 | S | 4 | 20220801 |
| EPI_ISL_19782028 | NSP3 | hCoV-19/USA/IL-RIPHL_33439_G/2025 | R | 1341 | L | 460 | 20250218 |
| EPI_ISL_867126 | NSP3 | hCoV-19/England/OXON-F4ABCE/2021 | R | 1341 | E | 1 | 20210102 |
| EPI_ISL_17200655 | NSP3 | hCoV-19/England/PLYM-326F7814/2023 | R | 1341 | insGFKP | 1 | 20230305 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1342 | Q | 1 | 20220210 |
| EPI_ISL_17885407 | NSP3 | hCoV-19/Brazil/MS-REDE-36/2022 | C | 1342 | H | 2 | 20220126 |
| EPI_ISL_17226193 | NSP3 | hCoV-19/USA/CA-ASC-210885359/2023 | C | 1342 | L | 15 | 20230305 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | C | 1342 | stop | 27 | 20220910 |
| EPI_ISL_19687868 | NSP3 | hCoV-19/South Korea/KDCA296725/2024 | C | 1342 | Y | 500 | 20241228 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | C | 1342 | T | 1 | 20210705 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | C | 1342 | insK | 1 | 20211222 |
| EPI_ISL_19745641 | NSP3 | hCoV-19/USA/NY-PRL-250219_81B11/2025 | C | 1342 | F | 412 | 20250206 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | C | 1342 | insFF | 1 | 20210817 |
| EPI_ISL_19212177 | NSP3 | hCoV-19/Indonesia/JI-ITD-61778NT/2023 | C | 1342 | R | 84 | 20231226 |
| EPI_ISL_19507707 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10034788/2024 | C | 1342 | W | 5 | 20241003 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | C | 1342 | I | 22 | 20230624 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | C | 1342 | del | 72 | 20231211 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | C | 1342 | G | 7 | 20230217 |
| EPI_ISL_16258494 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2033/2022 | C | 1342 | N | 1 | 20220812 |
| EPI_ISL_19711723 | NSP3 | hCoV-19/South Korea/KDCA296874/2025 | C | 1342 | S | 41 | 20250106 |
| EPI_ISL_17275378 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45904/2023 | C | 1342 | A | 1 | 20230213 |
| EPI_ISL_8435654 | NSP3 | hCoV-19/USA/OR_UO_MAP001568_S148_L001/2022 | C | 1342 | insstopTVF | 12 | 20220103 |
| EPI_ISL_842193 | NSP3 | hCoV-19/England/QEUH-A8CE17/2020 | C | 1342 | insRLLstopQRI | 1 | 20201016 |
| EPI_ISL_11514258 | NSP3 | hCoV-19/Brazil/PA-ITV-3483/2021 | C | 1342 | V | 5 | 20211021 |
| EPI_ISL_19019133 | NSP3 | hCoV-19/France/ARA-HCL024045135101/2024 | L | 1343 | V | 90 | 20240316 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | L | 1343 | G | 1 | 20210827 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | L | 1343 | Y | 3 | 20230217 |
| EPI_ISL_11514258 | NSP3 | hCoV-19/Brazil/PA-ITV-3483/2021 | L | 1343 | D | 2 | 20211021 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | L | 1343 | M | 1 | 20220305 |
| EPI_ISL_15486114 | NSP3 | hCoV-19/USA/MI-UM-L358121714/2022 | L | 1343 | insRLR | 1 | 20221006 |
| EPI_ISL_19660426 | NSP3 | hCoV-19/USA/CA-CDPH-500139292/2024 | L | 1343 | I | 30 | 20240528 |
| EPI_ISL_11943803 | NSP3 | hCoV-19/England/DHSC-CYN3RGX/2022 | L | 1343 | N | 1 | 20220217 |
| EPI_ISL_19813276 | NSP3 | hCoV-19/Japan/FR050-0083/2025 | L | 1343 | S | 176 | 20250310 |
| EPI_ISL_19181637 | NSP3 | hCoV-19/Singapore/R30MQ22/2024 | L | 1343 | F | 40 | 20240520 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | L | 1343 | del | 59 | 20231211 |
| EPI_ISL_19507707 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10034788/2024 | L | 1343 | stop | 8 | 20241003 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 1343 | H | 1 | 20220812 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1343 | R | 19 | 20230624 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | L | 1343 | insFK | 1 | 20210915 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | L | 1343 | K | 3 | 20210815 |
| EPI_ISL_18237885 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000188576SP/2022 | L | 1343 | T | 3 | 20220726 |
| EPI_ISL_18226352 | NSP3 | hCoV-19/env/India/MH-FMR_K5-53a/2023 | L | 1343 | C | 1 | 20230308 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1343 | A | 1 | 20220210 |
| EPI_ISL_12753405 | NSP3 | hCoV-19/Russia/LIP-CRIE-7728247191/2022 | N | 1344 | T | 8 | 20220207 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | N | 1344 | insLYstopC | 1 | 20200608 |
| EPI_ISL_19394315 | NSP3 | hCoV-19/USA/WI-WSLH-2401282/2024 | N | 1344 | K | 110 | 20240418 |
| EPI_ISL_18604842 | NSP3 | hCoV-19/Singapore/R89MR420/2023 | N | 1344 | B | 6 | 20231130 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1344 | E | 2 | 20210318 |
| EPI_ISL_19755515 | NSP3 | hCoV-19/USA/CO-CDPHE-43017715/2025 | N | 1344 | S | 286 | 20250209 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | N | 1344 | stop | 1 | 20210805 |
| EPI_ISL_17275378 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45904/2023 | N | 1344 | R | 1 | 20230213 |
| EPI_ISL_19019133 | NSP3 | hCoV-19/France/ARA-HCL024045135101/2024 | N | 1344 | L | 46 | 20240316 |
| EPI_ISL_16258494 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2033/2022 | N | 1344 | G | 2 | 20220812 |
| EPI_ISL_5511695 | NSP3 | hCoV-19/USA/ID-IBL-758631/2021 | N | 1344 | insVFVL | 1 | 20210915 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | N | 1344 | A | 1 | 20210817 |
| EPI_ISL_18226352 | NSP3 | hCoV-19/env/India/MH-FMR_K5-53a/2023 | N | 1344 | F | 3 | 20230308 |
| EPI_ISL_17200655 | NSP3 | hCoV-19/England/PLYM-326F7814/2023 | N | 1344 | Y | 34 | 20230305 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | N | 1344 | I | 11 | 20230401 |
| EPI_ISL_18875863 | NSP3 | hCoV-19/Russia/RARI-1653/2023 | N | 1344 | H | 37 | 20230710 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1344 | V | 8 | 20230101 |
| EPI_ISL_19773707 | NSP3 | hCoV-19/USA/OR-OSPHL10179/2025 | N | 1344 | D | 210 | 20250128 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | N | 1344 | del | 54 | 20231211 |
| EPI_ISL_11943803 | NSP3 | hCoV-19/England/DHSC-CYN3RGX/2022 | N | 1344 | insstopTVFVL | 1 | 20220217 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | N | 1344 | Q | 2 | 20230106 |
| EPI_ISL_19300388 | NSP3 | hCoV-19/Spain/AN-PMC-41045/2024 | R | 1345 | N | 4 | 20240605 |
| EPI_ISL_16528805 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12902/2022 | R | 1345 | F | 1 | 20221211 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | R | 1345 | A | 19 | 20230624 |
| EPI_ISL_12495946 | NSP3 | hCoV-19/France/ARA-HCL722002380701/2022 | R | 1345 | T | 8 | 20220420 |
| EPI_ISL_18226352 | NSP3 | hCoV-19/env/India/MH-FMR_K5-53a/2023 | R | 1345 | K | 20 | 20230308 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | R | 1345 | M | 2 | 20210827 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | R | 1345 | V | 1 | 20210801 |
| EPI_ISL_10924600 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11595/2022 | R | 1345 | E | 2 | 20220226 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | R | 1345 | Y | 4 | 20230217 |
| EPI_ISL_19019133 | NSP3 | hCoV-19/France/ARA-HCL024045135101/2024 | R | 1345 | I | 45 | 20240316 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | R | 1345 | del | 58 | 20231211 |
| EPI_ISL_19693418 | NSP3 | hCoV-19/USA/MI-UM-10061351676/2024 | R | 1345 | S | 295 | 20241217 |
| EPI_ISL_19016031 | NSP3 | hCoV-19/Turkey/HSGM-AA000216/2024 | R | 1345 | L | 362 | 20240213 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | R | 1345 | G | 32 | 20230401 |
| EPI_ISL_17200655 | NSP3 | hCoV-19/England/PLYM-326F7814/2023 | R | 1345 | stop | 32 | 20230305 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | R | 1345 | P | 5 | 20230217 |
| EPI_ISL_19806995 | NSP3 | hCoV-19/Canada/ON-HSC-202501303-v1/2025 | R | 1345 | C | 1725 | 20250215 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | R | 1345 | Q | 6 | 20230101 |
| EPI_ISL_19697914 | NSP3 | hCoV-19/Singapore/Y25R4MSC7/2025 | R | 1345 | H | 670 | 20250116 |
| EPI_ISL_18226352 | NSP3 | hCoV-19/env/India/MH-FMR_K5-53a/2023 | V | 1346 | P | 3 | 20230308 |
| EPI_ISL_2240490 | NSP3 | hCoV-19/Scotland/OXON-F81CE6/2021 | V | 1346 | G | 3 | 20210427 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | V | 1346 | insAVD | 1 | 20220305 |
| EPI_ISL_8103856 | NSP3 | hCoV-19/Reunion/CHU721110638404/2021 | V | 1346 | insFVLII | 4 | 20211106 |
| EPI_ISL_14392780 | NSP3 | hCoV-19/India/MH-NCCS-2748700655982/2021 | V | 1346 | C | 5 | 20211110 |
| EPI_ISL_8882740 | NSP3 | hCoV-19/India/GA-NCCS-3055200149898/2021 | V | 1346 | insLLII | 1 | 20210709 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | V | 1346 | N | 1 | 20220812 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | V | 1346 | del | 57 | 20231211 |
| EPI_ISL_18237885 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000188576SP/2022 | V | 1346 | M | 1 | 20220726 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | V | 1346 | R | 1 | 20220721 |
| EPI_ISL_19646339 | NSP3 | hCoV-19/Australia/QLD0x014F91/2024 | V | 1346 | F | 117 | 20241218 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | V | 1346 | T | 3 | 20230217 |
| EPI_ISL_19717366 | NSP3 | hCoV-19/Australia/QLD0x01519B/2025 | V | 1346 | A | 619 | 20250123 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | V | 1346 | insVST | 1 | 20210121 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | V | 1346 | insLY | 8 | 20230401 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | V | 1346 | Y | 5 | 20230217 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | V | 1346 | L | 51 | 20230401 |
| EPI_ISL_19687542 | NSP3 | hCoV-19/USA/NY-PRL-250114_83B10/2025 | V | 1346 | I | 314 | 20250106 |
| EPI_ISL_16829092 | NSP3 | hCoV-19/Italy/LOM-ASST-69283205/2023 | V | 1346 | D | 3 | 20230130 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | V | 1346 | E | 1 | 20221205 |
| EPI_ISL_18980880 | NSP3 | hCoV-19/USA/TX-HMH-M-140189/2024 | V | 1346 | insVLII | 1 | 20240229 |
| EPI_ISL_999011 | NSP3 | hCoV-19/England/OXON-F53A3E/2021 | V | 1346 | insFR | 1 | 20210104 |
| EPI_ISL_19496376 | NSP3 | hCoV-19/env/Uruguay/LEVVZ-660/2023 | V | 1346 | S | 6 | 20230619 |
| EPI_ISL_19688048 | NSP3 | hCoV-19/USA/UT-UPHL-250117829813/2025 | C | 1347 | F | 1723 | 20250107 |
| EPI_ISL_14562123 | NSP3 | hCoV-19/Mexico/JAL_CIAD-IMSS_202201030239/2022 | C | 1347 | G | 7 | 20220802 |
| EPI_ISL_19469114 | NSP3 | hCoV-19/Malaysia/MGVI_GV1035/2024 | C | 1347 | R | 104 | 20240715 |
| EPI_ISL_18830995 | NSP3 | hCoV-19/Brazil/RS-LGBM-HMV-02-0284-F/2023 | C | 1347 | S | 22 | 20231218 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | C | 1347 | L | 13 | 20230101 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | C | 1347 | stop | 34 | 20230401 |
| EPI_ISL_19824260 | NSP3 | hCoV-19/USA/IL-RIPHL_124043_G/2025 | C | 1347 | Y | 463 | 20250322 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | C | 1347 | K | 20 | 20230624 |
| EPI_ISL_16258483 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2071/2022 | C | 1347 | V | 14 | 20220728 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | C | 1347 | del | 56 | 20231211 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | C | 1347 | H | 1 | 20220131 |
| EPI_ISL_11441858 | NSP3 | hCoV-19/USA/ME-HETL-J14145/2022 | C | 1347 | W | 3106 | 20220208 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | C | 1347 | A | 2 | 20210818 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | C | 1347 | T | 1 | 20210121 |
| EPI_ISL_17275378 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45904/2023 | C | 1347 | P | 2 | 20230213 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | C | 1347 | I | 3 | 20230106 |
| EPI_ISL_19593166 | NSP3 | hCoV-19/USA/CO-CDPHE-42451990/2024 | T | 1348 | N | 331 | 20241106 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | T | 1348 | E | 1 | 20210622 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | T | 1348 | Y | 14 | 20230401 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | T | 1348 | K | 21 | 20230624 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1348 | insstopL | 4 | 20230101 |
| EPI_ISL_19693418 | NSP3 | hCoV-19/USA/MI-UM-10061351676/2024 | T | 1348 | A | 284 | 20241217 |
| EPI_ISL_19019133 | NSP3 | hCoV-19/France/ARA-HCL024045135101/2024 | T | 1348 | L | 54 | 20240316 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1348 | Q | 1 | 20210318 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | T | 1348 | G | 1 | 20220131 |
| EPI_ISL_16258483 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2071/2022 | T | 1348 | S | 9 | 20220728 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1348 | del | 62 | 20231211 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | T | 1348 | V | 7 | 20210927 |
| EPI_ISL_18788574 | NSP3 | hCoV-19/Sweden/O-14_SE300_DC24-000148/2024 | T | 1348 | P | 4 | 20240112 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | T | 1348 | insVFVL | 1 | 20210805 |
| EPI_ISL_19829169 | NSP3 | hCoV-19/USA/MA-CDC-LC1136613/2025 | T | 1348 | I | 10821 | 20250402 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | T | 1348 | C | 2 | 20210818 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | T | 1348 | F | 4 | 20230106 |
| EPI_ISL_19562052 | NSP3 | hCoV-19/Spain/PV-HUD-39253164/2024 | N | 1349 | D | 198 | 20241105 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | N | 1349 | P | 1 | 20220812 |
| EPI_ISL_19823020 | NSP3 | hCoV-19/USA/MI-UM-10062322777/2025 | N | 1349 | T | 41 | 20250211 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | N | 1349 | G | 2 | 20210622 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | N | 1349 | V | 8 | 20220623 |
| EPI_ISL_19704247 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00020/2022 | N | 1349 | stop | 6 | 20220404 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | N | 1349 | F | 1 | 20210817 |
| EPI_ISL_17200655 | NSP3 | hCoV-19/England/PLYM-326F7814/2023 | N | 1349 | L | 33 | 20230305 |
| EPI_ISL_18726214 | NSP3 | hCoV-19/Singapore/R1MQ111/2023 | N | 1349 | B | 12 | 20231229 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | N | 1349 | insDL | 1 | 20201004 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | N | 1349 | A | 1 | 20220721 |
| EPI_ISL_19266883 | NSP3 | hCoV-19/Hubei/HCDC-JZ5850/2024 | N | 1349 | I | 57 | 20240703 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | N | 1349 | M | 1 | 20220305 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | N | 1349 | del | 85 | 20231211 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1349 | H | 7 | 20230101 |
| EPI_ISL_19615484 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09145/2024 | N | 1349 | S | 122 | 20241204 |
| EPI_ISL_16009665 | NSP3 | hCoV-19/USA/CA-CDC-STM-CB8PEVRCF/2022 | N | 1349 | Y | 6 | 20221117 |
| EPI_ISL_18160354 | NSP3 | hCoV-19/USA/NY-CDC-QDX83784682/2023 | N | 1349 | K | 50 | 20230809 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | Y | 1350 | N | 22 | 20230624 |
| EPI_ISL_19493577 | NSP3 | hCoV-19/Australia/SA2011676/2024 | Y | 1350 | H | 82 | 20241011 |
| EPI_ISL_17200655 | NSP3 | hCoV-19/England/PLYM-326F7814/2023 | Y | 1350 | F | 43 | 20230305 |
| EPI_ISL_2707330 | NSP3 | hCoV-19/England/OXON-F836AA/2021 | Y | 1350 | M | 1 | 20210609 |
| EPI_ISL_2903199 | NSP3 | hCoV-19/England/OXON-F88CEF/2020 | Y | 1350 | insVYYNLVFTIKC | 1 | 20201018 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1350 | G | 5 | 20230101 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | Y | 1350 | insVLIN | 1 | 20210919 |
| EPI_ISL_19019133 | NSP3 | hCoV-19/France/ARA-HCL024045135101/2024 | Y | 1350 | S | 52 | 20240316 |
| EPI_ISL_7855062 | NSP3 | hCoV-19/USA/LA-OD-5767956914/2021 | Y | 1350 | I | 7 | 20211209 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | Y | 1350 | del | 89 | 20231211 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | Y | 1350 | K | 5 | 20220812 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1350 | D | 5 | 20220210 |
| EPI_ISL_14947797 | NSP3 | hCoV-19/Japan/RIMD15015/2022 | Y | 1350 | stop | 5 | 20220727 |
| EPI_ISL_19776525 | NSP3 | hCoV-19/Denmark/DCGC-691895/2025 | Y | 1350 | C | 284 | 20250210 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | Y | 1350 | T | 1 | 20211011 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | Y | 1350 | L | 10 | 20221205 |
| EPI_ISL_19761402 | NSP3 | hCoV-19/USA/UT-UPHL-250228442725/2025 | M | 1351 | V | 7303 | 20250208 |
| EPI_ISL_19146811 | NSP3 | hCoV-19/England/CLIMB-CM7YFFAW/2024 | M | 1351 | I | 157 | 20240507 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | M | 1351 | insS | 1 | 20211222 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | M | 1351 | C | 5 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | M | 1351 | Q | 2 | 20210318 |
| EPI_ISL_12934340 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011622-1560/2022 | M | 1351 | stop | 6 | 20220116 |
| EPI_ISL_18966849 | NSP3 | hCoV-19/South Korea/KDCA286789/2024 | M | 1351 | K | 37 | 20240203 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | M | 1351 | E | 1 | 20210212 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 1351 | F | 1 | 20220210 |
| EPI_ISL_17557920 | NSP3 | hCoV-19/Israel/SMC-7112968/2023 | M | 1351 | S | 2 | 20230316 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | M | 1351 | del | 83 | 20231211 |
| EPI_ISL_18446237 | NSP3 | hCoV-19/USA/CA-HLX-STM-RRGFVJPF5/2023 | M | 1351 | R | 12 | 20231013 |
| EPI_ISL_19182830 | NSP3 | hCoV-19/Canada/NL-NML-713542/2024 | M | 1351 | L | 130 | 20240521 |
| EPI_ISL_19828634 | NSP3 | hCoV-19/Japan/FR055-0192/2025 | M | 1351 | T | 234 | 20250323 |
| EPI_ISL_16285927 | NSP3 | hCoV-19/England/LSPA-3263845F/2022 | M | 1351 | Y | 7 | 20221220 |
| EPI_ISL_16919762 | NSP3 | hCoV-19/USA/TX-HMH-M-124398/2023 | M | 1351 | A | 4 | 20230126 |
| EPI_ISL_15743723 | NSP3 | hCoV-19/Sweden/03_SE600_000200484247N2/2022 | M | 1351 | insXXX | 1 | 20221101 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | P | 1352 | D | 1 | 20210621 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | P | 1352 | stop | 8 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1352 | G | 1 | 20210318 |
| EPI_ISL_951129 | NSP3 | hCoV-19/England/OXON-F4B1F8/2021 | P | 1352 | insLG | 1 | 20210104 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | P | 1352 | del | 102 | 20231211 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | P | 1352 | C | 4 | 20230217 |
| EPI_ISL_19721623 | NSP3 | hCoV-19/USA/WI-WSLH-2500031/2024 | P | 1352 | L | 86 | 20241225 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | P | 1352 | E | 3 | 20230106 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | P | 1352 | M | 1 | 20220812 |
| EPI_ISL_9403970 | NSP3 | hCoV-19/USA/TN-ASC-210504331/2021 | P | 1352 | insWF | 1 | 20211229 |
| EPI_ISL_15711875 | NSP3 | hCoV-19/Japan/PG-384535/2022 | P | 1352 | H | 17 | 20221019 |
| EPI_ISL_1178804 | NSP3 | hCoV-19/England/OXON-F69F72/2021 | P | 1352 | Q | 1 | 20210206 |
| EPI_ISL_18821641 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20022/2023 | P | 1352 | R | 4 | 20231218 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | P | 1352 | N | 2 | 20211011 |
| EPI_ISL_16599616 | NSP3 | hCoV-19/USA/TX-HMH-122884/2023 | P | 1352 | insISLLYC | 6 | 20230108 |
| EPI_ISL_839476 | NSP3 | hCoV-19/England/MILK-B5ADE7/2020 | P | 1352 | I | 1 | 20201106 |
| EPI_ISL_17713231 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200464567N2/2022 | P | 1352 | insXXXXXXX | 1 | 20220922 |
| EPI_ISL_19412251 | NSP3 | hCoV-19/USA/WA-GBW-GKPLAAAA38656/2024 | P | 1352 | S | 86 | 20240903 |
| EPI_ISL_17034997 | NSP3 | hCoV-19/USA/TX-HMH-M-125490/2023 | P | 1352 | T | 6 | 20230210 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | P | 1352 | F | 2 | 20221205 |
| EPI_ISL_16285927 | NSP3 | hCoV-19/England/LSPA-3263845F/2022 | P | 1352 | A | 16 | 20221220 |
| EPI_ISL_19192492 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16042/2024 | P | 1352 | Y | 17 | 20240330 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | P | 1352 | K | 2 | 20210817 |
| EPI_ISL_19260210 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA11236-P0/2024 | Y | 1353 | S | 6 | 20240625 |
| EPI_ISL_19192492 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16042/2024 | Y | 1353 | A | 3 | 20240330 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | Y | 1353 | I | 7 | 20211011 |
| EPI_ISL_19750386 | NSP3 | hCoV-19/Canada/QC-L00845775001/2025 | Y | 1353 | F | 569 | 20250217 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | Y | 1353 | N | 7 | 20220812 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | Y | 1353 | G | 1 | 20220305 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | Y | 1353 | V | 4 | 20220812 |
| EPI_ISL_18546546 | NSP3 | hCoV-19/USA/TX-HMH-M-135130/2023 | Y | 1353 | L | 34 | 20231020 |
| EPI_ISL_10953858 | NSP3 | hCoV-19/USA/ND-NDDH-12603/2022 | Y | 1353 | D | 1 | 20220128 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | Y | 1353 | del | 97 | 20231211 |
| EPI_ISL_840337 | NSP3 | hCoV-19/England/OXON-F45DDC/2020 | Y | 1353 | E | 1 | 20201227 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1353 | T | 4 | 20230101 |
| EPI_ISL_12934340 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011622-1560/2022 | Y | 1353 | insAL | 3 | 20220116 |
| EPI_ISL_8619240 | NSP3 | hCoV-19/Germany/NI-IOV-60387200/2021 | Y | 1353 | R | 5 | 20211223 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | Y | 1353 | K | 1 | 20230106 |
| EPI_ISL_19217059 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-13F-MM00076R/2024 | Y | 1353 | C | 83 | 20240613 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | Y | 1353 | W | 3 | 20230217 |
| EPI_ISL_18821641 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20022/2023 | Y | 1353 | H | 13 | 20231218 |
| EPI_ISL_8619226 | NSP3 | hCoV-19/Germany/NI-IOV-1233081/2022 | Y | 1353 | insstop | 1 | 20220104 |
| EPI_ISL_17494373 | NSP3 | hCoV-19/Yunnan/YNCDC-0007/2023 | Y | 1353 | stop | 6 | 20230322 |
| EPI_ISL_18821641 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20022/2023 | F | 1354 | A | 5 | 20231218 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | F | 1354 | H | 2 | 20210827 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | F | 1354 | G | 3 | 20220812 |
| EPI_ISL_19688965 | NSP3 | hCoV-19/USA/NY-URMC-P3S1T606-1/2025 | F | 1354 | C | 85 | 20250102 |
| EPI_ISL_16599616 | NSP3 | hCoV-19/USA/TX-HMH-122884/2023 | F | 1354 | N | 7 | 20230108 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | F | 1354 | insstopTV | 1 | 20210121 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | F | 1354 | insALIS | 1 | 20220120 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1354 | M | 1 | 20201214 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | F | 1354 | insS | 1 | 20210915 |
| EPI_ISL_19472632 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YFST1/2024 | F | 1354 | L | 609 | 20240923 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | F | 1354 | I | 43 | 20231211 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | F | 1354 | W | 2 | 20230106 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | F | 1354 | D | 1 | 20220305 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | F | 1354 | K | 20 | 20230624 |
| EPI_ISL_19784296 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12498-P0/2025 | F | 1354 | V | 45 | 20250212 |
| EPI_ISL_19326136 | NSP3 | hCoV-19/Cambodia/940486/2024 | F | 1354 | S | 61 | 20240614 |
| EPI_ISL_19750784 | NSP3 | hCoV-19/Spain/AS-HUCA-232513889/2025 | F | 1354 | Y | 11 | 20250216 |
| EPI_ISL_15157242 | NSP3 | hCoV-19/India/GA-NCCS-3055200216547/2021 | F | 1354 | insIAK | 1 | 20211208 |
| EPI_ISL_18410048 | NSP3 | hCoV-19/USA/CO-CDPHE-41221806/2023 | F | 1354 | del | 67 | 20230827 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | F | 1354 | E | 4 | 20220227 |
| EPI_ISL_950839 | NSP3 | hCoV-19/England/OXON-F4549B/2020 | F | 1354 | Q | 1 | 20201222 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | F | 1355 | H | 1 | 20210815 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | F | 1355 | P | 1 | 20221205 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | F | 1355 | S | 14 | 20220305 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | F | 1355 | E | 11 | 20230401 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | F | 1355 | insA | 1 | 20210905 |
| EPI_ISL_11355408 | NSP3 | hCoV-19/France/GES-ChNa-210059743501/2021 | F | 1355 | insNC | 2 | 20210716 |
| EPI_ISL_19785106 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13836/2024 | F | 1355 | V | 116 | 20241206 |
| EPI_ISL_19111204 | NSP3 | hCoV-19/Japan/PG-582712/2023 | F | 1355 | I | 37 | 20231030 |
| EPI_ISL_19810443 | NSP3 | hCoV-19/Portugal/PT52423/2025 | F | 1355 | L | 1465 | 20250314 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | F | 1355 | stop | 2 | 20230217 |
| EPI_ISL_19771718 | NSP3 | hCoV-19/USA/NV-NSPHL-CE-03_10_005/2025 | F | 1355 | C | 39 | 20250129 |
| EPI_ISL_15931471 | NSP3 | hCoV-19/USA/NC-WFSM-1085-8060/2022 | F | 1355 | insQPV | 1 | 20221116 |
| EPI_ISL_17427525 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2857/2023 | F | 1355 | del | 61 | 20230401 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | F | 1355 | insstopNstopSIYAD | 1 | 20210817 |
| EPI_ISL_840337 | NSP3 | hCoV-19/England/OXON-F45DDC/2020 | F | 1355 | Q | 1 | 20201227 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1355 | T | 3 | 20220210 |
| EPI_ISL_19019133 | NSP3 | hCoV-19/France/ARA-HCL024045135101/2024 | F | 1355 | Y | 55 | 20240316 |
| EPI_ISL_17200655 | NSP3 | hCoV-19/England/PLYM-326F7814/2023 | F | 1355 | A | 15 | 20230305 |
| EPI_ISL_16328708 | NSP3 | hCoV-19/Germany/BW-RKI-I-1070835/2022 | F | 1355 | insTLTQ | 1 | 20221216 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | F | 1355 | W | 2 | 20231211 |
| EPI_ISL_8619226 | NSP3 | hCoV-19/Germany/NI-IOV-1233081/2022 | T | 1356 | stop | 2 | 20220104 |
| EPI_ISL_19765843 | NSP3 | hCoV-19/USA/CT-DPH-1276213001/2025 | T | 1356 | I | 9627 | 20250128 |
| EPI_ISL_19001651 | NSP3 | hCoV-19/South Korea/KDCA288204/2024 | T | 1356 | A | 158 | 20240228 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | T | 1356 | M | 3 | 20221205 |
| EPI_ISL_17427525 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2857/2023 | T | 1356 | del | 59 | 20230401 |
| EPI_ISL_18821641 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20022/2023 | T | 1356 | L | 12 | 20231218 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1356 | W | 3 | 20210318 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | T | 1356 | K | 2 | 20230217 |
| EPI_ISL_13159343 | NSP3 | hCoV-19/India/MZ-INSACOG-1572600025921/2022 | T | 1356 | P | 1 | 20220205 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1356 | F | 4 | 20231211 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | T | 1356 | insGV | 1 | 20200729 |
| EPI_ISL_2707330 | NSP3 | hCoV-19/England/OXON-F836AA/2021 | T | 1356 | insK | 1 | 20210609 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1356 | E | 1 | 20220210 |
| EPI_ISL_18481128 | NSP3 | hCoV-19/Shanghai/SCDC-14723/2023 | T | 1356 | S | 21 | 20231010 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | T | 1356 | R | 2 | 20230106 |
| EPI_ISL_19019133 | NSP3 | hCoV-19/France/ARA-HCL024045135101/2024 | T | 1356 | N | 54 | 20240316 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | T | 1356 | H | 1 | 20210806 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | T | 1356 | V | 51 | 20230401 |
| EPI_ISL_18546546 | NSP3 | hCoV-19/USA/TX-HMH-M-135130/2023 | T | 1356 | Y | 40 | 20231020 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | T | 1356 | insECSN | 1 | 20220305 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 1357 | T | 16 | 20220812 |
| EPI_ISL_8619240 | NSP3 | hCoV-19/Germany/NI-IOV-60387200/2021 | L | 1357 | stop | 2 | 20211223 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | L | 1357 | Y | 4 | 20221205 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | L | 1357 | Q | 12 | 20230401 |
| EPI_ISL_18546546 | NSP3 | hCoV-19/USA/TX-HMH-M-135130/2023 | L | 1357 | F | 46 | 20231020 |
| EPI_ISL_17200655 | NSP3 | hCoV-19/England/PLYM-326F7814/2023 | L | 1357 | I | 20 | 20230305 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | L | 1357 | R | 4 | 20220227 |
| EPI_ISL_3244605 | NSP3 | hCoV-19/India/LD-ICMR-NIV-INSACOG-GSEQ-4653/2021 | L | 1357 | G | 1 | 20210606 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | L | 1357 | V | 9 | 20230217 |
| EPI_ISL_18397442 | NSP3 | hCoV-19/Singapore/R74MR99/2023 | L | 1357 | J | 2 | 20231009 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | L | 1357 | W | 1 | 20210805 |
| EPI_ISL_5202789 | NSP3 | hCoV-19/USA/FL-CDC-STM-000734238/2021 | L | 1357 | K | 10 | 20210921 |
| EPI_ISL_1309771 | NSP3 | hCoV-19/England/OXON-F766AA/2021 | L | 1357 | insS | 1 | 20210215 |
| EPI_ISL_840337 | NSP3 | hCoV-19/England/OXON-F45DDC/2020 | L | 1357 | insE | 1 | 20201227 |
| EPI_ISL_19019133 | NSP3 | hCoV-19/France/ARA-HCL024045135101/2024 | L | 1357 | C | 42 | 20240316 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | L | 1357 | D | 2 | 20220812 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | L | 1357 | A | 3 | 20230217 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1357 | del | 82 | 20230624 |
| EPI_ISL_16984274 | NSP3 | hCoV-19/Japan/PG-448369/2023 | L | 1357 | S | 14 | 20230125 |
| EPI_ISL_2157984 | NSP3 | hCoV-19/Turkey/HSGM-11578/2021 | L | 1357 | insFTL | 1 | 20210311 |
| EPI_ISL_950839 | NSP3 | hCoV-19/England/OXON-F4549B/2020 | L | 1357 | E | 1 | 20201222 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | L | 1358 | N | 1 | 20221205 |
| EPI_ISL_19604910 | NSP3 | hCoV-19/Sichuan/BZCDC-0302/2024 | L | 1358 | F | 272 | 20240701 |
| EPI_ISL_17972286 | NSP3 | hCoV-19/USA/NY-NY-7/2023 | L | 1358 | W | 6 | 20230419 |
| EPI_ISL_19019133 | NSP3 | hCoV-19/France/ARA-HCL024045135101/2024 | L | 1358 | V | 210 | 20240316 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1358 | del | 80 | 20230624 |
| EPI_ISL_19807219 | NSP3 | hCoV-19/Canada/ON-KHS-202500773-v1/2025 | L | 1358 | M | 162 | 20250307 |
| EPI_ISL_1167191 | NSP3 | hCoV-19/Egypt/MASRI-C5-017/2020 | L | 1358 | Q | 1 | 20200525 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 1358 | T | 1 | 20220812 |
| EPI_ISL_984295 | NSP3 | hCoV-19/Belgium/UZA-UA-2532/2021 | L | 1358 | insLIFVLLLEVQI | 1 | 20210127 |
| EPI_ISL_5441243 | NSP3 | hCoV-19/USA/ID-IBL-758886/2021 | L | 1358 | Y | 3 | 20210918 |
| EPI_ISL_19803564 | NSP3 | hCoV-19/USA/WI-WSLH-2500767/2025 | L | 1358 | S | 80 | 20250211 |
| EPI_ISL_18385487 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17170260/2023 | L | 1358 | stop | 1 | 20230925 |
| EPI_ISL_867143 | NSP3 | hCoV-19/England/OXON-F4B680/2021 | L | 1358 | E | 1 | 20210103 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | L | 1358 | R | 1 | 20210812 |
| EPI_ISL_18937071 | NSP3 | hCoV-19/USA/NJ-CDC-LC1096956/2024 | L | 1358 | I | 126 | 20240208 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1358 | P | 2 | 20220210 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | L | 1358 | C | 1 | 20220128 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1358 | K | 1 | 20210318 |
| EPI_ISL_17275378 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45904/2023 | L | 1359 | stop | 1 | 20230213 |
| EPI_ISL_15647052 | NSP3 | hCoV-19/Germany/BW-RKI-I-1019983/2022 | L | 1359 | V | 25 | 20221020 |
| EPI_ISL_10082630 | NSP3 | hCoV-19/USA/ID-IBL-789866/2022 | L | 1359 | H | 1 | 20220127 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1359 | del | 80 | 20230624 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | L | 1359 | R | 4 | 20230106 |
| EPI_ISL_12215607 | NSP3 | hCoV-19/France/IDF-AphpSA-ZJ000589/2022 | L | 1359 | C | 3 | 20220102 |
| EPI_ISL_5998351 | NSP3 | hCoV-19/England/QEUH-28C296B/2021 | L | 1359 | Q | 2 | 20211028 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | L | 1359 | N | 1 | 20211011 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | L | 1359 | insstopQ | 1 | 20220623 |
| EPI_ISL_951443 | NSP3 | hCoV-19/England/OXON-F562CA/2021 | L | 1359 | S | 1 | 20210113 |
| EPI_ISL_18473436 | NSP3 | hCoV-19/Singapore/R79MR67/2023 | L | 1359 | P | 17 | 20231026 |
| EPI_ISL_19487703 | NSP3 | hCoV-19/Ireland/LK-UHL-689075/2024 | L | 1359 | I | 98 | 20240810 |
| EPI_ISL_839476 | NSP3 | hCoV-19/England/MILK-B5ADE7/2020 | L | 1359 | G | 1 | 20201106 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | L | 1359 | Y | 9 | 20220128 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1359 | K | 5 | 20220210 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | L | 1359 | T | 1 | 20221205 |
| EPI_ISL_8619240 | NSP3 | hCoV-19/Germany/NI-IOV-60387200/2021 | L | 1359 | F | 1 | 20211223 |
| EPI_ISL_18546546 | NSP3 | hCoV-19/USA/TX-HMH-M-135130/2023 | L | 1359 | A | 41 | 20231020 |
| EPI_ISL_17351415 | NSP3 | hCoV-19/USA/NY-CDC-LC1030818/2023 | L | 1359 | J | 10 | 20230316 |
| EPI_ISL_18546546 | NSP3 | hCoV-19/USA/TX-HMH-M-135130/2023 | Q | 1360 | T | 43 | 20231020 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | Q | 1360 | N | 9 | 20220128 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | Q | 1360 | E | 46 | 20230401 |
| EPI_ISL_19019133 | NSP3 | hCoV-19/France/ARA-HCL024045135101/2024 | Q | 1360 | L | 73 | 20240316 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | Q | 1360 | C | 34 | 20230401 |
| EPI_ISL_17763719 | NSP3 | hCoV-19/USA/TX-HMH-128939/2023 | Q | 1360 | K | 17 | 20230512 |
| EPI_ISL_19217059 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-13F-MM00076R/2024 | Q | 1360 | R | 234 | 20240613 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | Q | 1360 | F | 1 | 20210915 |
| EPI_ISL_13192451 | NSP3 | hCoV-19/USA/NY-SUNYQB-61210300501959/2022 | Q | 1360 | stop | 12 | 20220511 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | Q | 1360 | S | 4 | 20231211 |
| EPI_ISL_19564222 | NSP3 | hCoV-19/Australia/QLD0x014D91/2024 | Q | 1360 | H | 130 | 20241107 |
| EPI_ISL_19646667 | NSP3 | hCoV-19/Singapore/Y25R1MSC133/2024 | Q | 1360 | Z | 8 | 20241231 |
| EPI_ISL_3411094 | NSP3 | hCoV-19/USA/WA-CDC-UW21073155486/2021 | Q | 1360 | P | 1 | 20210731 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | Q | 1360 | V | 3 | 20220812 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | Q | 1360 | M | 1 | 20201214 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | Q | 1360 | G | 4 | 20220227 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | Q | 1360 | Y | 20 | 20220110 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | Q | 1360 | del | 83 | 20230624 |
| EPI_ISL_17949380 | NSP3 | hCoV-19/France/BFC-IPP15919/2023 | L | 1361 | W | 3 | 20230619 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1361 | G | 1 | 20210318 |
| EPI_ISL_8619226 | NSP3 | hCoV-19/Germany/NI-IOV-1233081/2022 | L | 1361 | A | 1 | 20220104 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1361 | del | 84 | 20230624 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | L | 1361 | insQQIXXS | 1 | 20230217 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | L | 1361 | T | 2 | 20210827 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | L | 1361 | Y | 6 | 20220623 |
| EPI_ISL_19783444 | NSP3 | hCoV-19/England/CLIMB-CM7YRCR9/2025 | L | 1361 | F | 921 | 20250301 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | L | 1361 | insYN | 2 | 20210816 |
| EPI_ISL_4348471 | NSP3 | hCoV-19/Thailand/ChaiNat_SEQ16153/2021 | L | 1361 | stop | 2 | 20210906 |
| EPI_ISL_11887753 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0716/2021 | L | 1361 | C | 4 | 20211229 |
| EPI_ISL_18546546 | NSP3 | hCoV-19/USA/TX-HMH-M-135130/2023 | L | 1361 | I | 47 | 20231020 |
| EPI_ISL_10082630 | NSP3 | hCoV-19/USA/ID-IBL-789866/2022 | L | 1361 | N | 6 | 20220127 |
| EPI_ISL_999442 | NSP3 | hCoV-19/England/OXON-F60421/2021 | L | 1361 | Q | 2 | 20210117 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | L | 1361 | insISLLYCYN | 1 | 20210121 |
| EPI_ISL_19831350 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56849/2025 | L | 1361 | V | 234 | 20250326 |
| EPI_ISL_18274601 | NSP3 | hCoV-19/USA/MI-MDHHS-SC44641/2023 | L | 1361 | S | 20 | 20230820 |
| EPI_ISL_19453213 | NSP3 | hCoV-19/USA/CO-CDPHE-42268739/2024 | L | 1361 | M | 14 | 20240811 |
| EPI_ISL_11938292 | NSP3 | hCoV-19/England/DHSC-CYDJHPJ/2022 | C | 1362 | L | 7 | 20220216 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | C | 1362 | G | 26 | 20231226 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | C | 1362 | insV | 1 | 20210815 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | C | 1362 | K | 13 | 20230401 |
| EPI_ISL_19457117 | NSP3 | hCoV-19/Netherlands/NB-RIVM-142135/2024 | C | 1362 | Y | 312 | 20240917 |
| EPI_ISL_17713231 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200464567N2/2022 | C | 1362 | Q | 5 | 20220922 |
| EPI_ISL_18546546 | NSP3 | hCoV-19/USA/TX-HMH-M-135130/2023 | C | 1362 | V | 45 | 20231020 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | C | 1362 | I | 31 | 20230401 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | C | 1362 | del | 68 | 20230217 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | C | 1362 | N | 1 | 20220812 |
| EPI_ISL_2404761 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050921-705/2021 | C | 1362 | insYNC | 1 | 20210509 |
| EPI_ISL_15722391 | NSP3 | hCoV-19/Colombia/DC-UGRA-VG-24879/2022 | C | 1362 | W | 15 | 20220805 |
| EPI_ISL_19336913 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6825/2024 | C | 1362 | R | 129 | 20240705 |
| EPI_ISL_17884112 | NSP3 | hCoV-19/Japan/PG-530236/2023 | C | 1362 | insTF | 1 | 20230525 |
| EPI_ISL_17759556 | NSP3 | hCoV-19/USA/UT-UPHL-24227/2023 | C | 1362 | S | 10 | 20230328 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | C | 1362 | T | 3 | 20220721 |
| EPI_ISL_19573962 | NSP3 | hCoV-19/Germany/BE-RKI-I-1146186/2024 | C | 1362 | F | 225 | 20241028 |
| EPI_ISL_17670446 | NSP3 | hCoV-19/Singapore/R31MR195/2023 | C | 1362 | stop | 3 | 20230510 |
| EPI_ISL_839476 | NSP3 | hCoV-19/England/MILK-B5ADE7/2020 | C | 1362 | M | 1 | 20201106 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1362 | A | 1 | 20210318 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1363 | del | 72 | 20231211 |
| EPI_ISL_19691814 | NSP3 | hCoV-19/Canada/ON-PHL-202502132/2025 | T | 1363 | I | 3802 | 20250115 |
| EPI_ISL_19506529 | NSP3 | hCoV-19/Australia/TAS008329/2024 | T | 1363 | N | 415 | 20241014 |
| EPI_ISL_5441243 | NSP3 | hCoV-19/USA/ID-IBL-758886/2021 | T | 1363 | insL | 2 | 20210918 |
| EPI_ISL_11938292 | NSP3 | hCoV-19/England/DHSC-CYDJHPJ/2022 | T | 1363 | M | 1 | 20220216 |
| EPI_ISL_7134226 | NSP3 | hCoV-19/Israel/CVL-22844/2021 | T | 1363 | insLL | 1 | 20211114 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | T | 1363 | H | 13 | 20230401 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | T | 1363 | V | 8 | 20230315 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1363 | L | 7 | 20220210 |
| EPI_ISL_18546546 | NSP3 | hCoV-19/USA/TX-HMH-M-135130/2023 | T | 1363 | Y | 45 | 20231020 |
| EPI_ISL_15428112 | NSP3 | hCoV-19/USA/FL-BPHL-14466/2022 | T | 1363 | P | 2 | 20220103 |
| EPI_ISL_19683489 | NSP3 | hCoV-19/Canada/AB-ABPHL-130354/2024 | T | 1363 | A | 731 | 20241224 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | T | 1363 | stop | 19 | 20220623 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | T | 1363 | insI | 1 | 20210705 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | T | 1363 | K | 1 | 20210915 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | T | 1363 | F | 4 | 20230106 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | T | 1363 | S | 38 | 20230401 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | T | 1363 | E | 2 | 20220811 |
| EPI_ISL_1730559 | NSP3 | hCoV-19/Scotland/OXON-F80036/2021 | T | 1363 | insstop | 1 | 20210401 |
| EPI_ISL_2707330 | NSP3 | hCoV-19/England/OXON-F836AA/2021 | F | 1364 | stop | 2 | 20210609 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | F | 1364 | K | 15 | 20220110 |
| EPI_ISL_15175433 | NSP3 | hCoV-19/France/ARA-HCL122029867601/2022 | F | 1364 | S | 173 | 20220917 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | F | 1364 | H | 1 | 20230217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1364 | N | 2 | 20201214 |
| EPI_ISL_18424106 | NSP3 | hCoV-19/USA/TX-HMH-134494/2023 | F | 1364 | Y | 18 | 20230928 |
| EPI_ISL_19536745 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YF3PT/2024 | F | 1364 | L | 159 | 20241028 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | F | 1364 | T | 19 | 20230624 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | F | 1364 | insYstopK | 2 | 20220105 |
| EPI_ISL_15262287 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL-2207/2022 | F | 1364 | C | 11 | 20220918 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | F | 1364 | del | 73 | 20231211 |
| EPI_ISL_13242837 | NSP3 | hCoV-19/USA/WA-UW-22042713471/2022 | F | 1364 | G | 8 | 20220427 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | F | 1364 | E | 3 | 20220623 |
| EPI_ISL_19639557 | NSP3 | hCoV-19/USA/DE-CDC-LC1126311/2024 | F | 1364 | I | 21 | 20241203 |
| EPI_ISL_18693056 | NSP3 | hCoV-19/USA/MD-MDH-9340/2023 | F | 1364 | V | 38 | 20231125 |
| EPI_ISL_18424106 | NSP3 | hCoV-19/USA/TX-HMH-134494/2023 | T | 1365 | F | 4 | 20230928 |
| EPI_ISL_17527150 | NSP3 | hCoV-19/Sweden/03_SE600_000200512752N2/2022 | T | 1365 | insXX | 1 | 20221229 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | T | 1365 | Q | 1 | 20210905 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | T | 1365 | C | 18 | 20230401 |
| EPI_ISL_11938292 | NSP3 | hCoV-19/England/DHSC-CYDJHPJ/2022 | T | 1365 | insVIHRHXXXXX | 1 | 20220216 |
| EPI_ISL_951385 | NSP3 | hCoV-19/England/OXON-F53D80/2021 | T | 1365 | insY | 2 | 20210105 |
| EPI_ISL_19825099 | NSP3 | hCoV-19/USA/CA-PFZ05043/2025 | T | 1365 | I | 6761 | 20250325 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | T | 1365 | insstopKY | 8 | 20211227 |
| EPI_ISL_2158005 | NSP3 | hCoV-19/Turkey/HSGM-11195/2021 | T | 1365 | P | 1 | 20210311 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | T | 1365 | L | 39 | 20230401 |
| EPI_ISL_19004980 | NSP3 | hCoV-19/Pakistan/KMU_PHRL_1208/2024 | T | 1365 | N | 13 | 20240307 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | T | 1365 | insL | 1 | 20210806 |
| EPI_ISL_1097309 | NSP3 | hCoV-19/Belgium/UZA-UA-CV1004514317/2021 | T | 1365 | V | 5 | 20210126 |
| EPI_ISL_13114356 | NSP3 | hCoV-19/USA/TX-HMH-M-98449/2022 | T | 1365 | stop | 3 | 20220524 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | T | 1365 | M | 1 | 20210827 |
| EPI_ISL_17713231 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200464567N2/2022 | T | 1365 | E | 3 | 20220922 |
| EPI_ISL_18542815 | NSP3 | hCoV-19/Italy/FVG-TS-65347208/2023 | T | 1365 | S | 22 | 20231113 |
| EPI_ISL_19687921 | NSP3 | hCoV-19/Slovenia/IMI-V1-741/2025 | T | 1365 | del | 518 | 20250114 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | T | 1365 | Y | 31 | 20220110 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | T | 1365 | K | 2 | 20210915 |
| EPI_ISL_19758092 | NSP3 | hCoV-19/Singapore/Y25R9MSC35/2025 | T | 1365 | A | 738 | 20250225 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | T | 1365 | R | 2 | 20230106 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | R | 1366 | stop | 10 | 20220105 |
| EPI_ISL_18822050 | NSP3 | hCoV-19/USA/LA-EVTL20920/2024 | R | 1366 | G | 149 | 20240111 |
| EPI_ISL_10197825 | NSP3 | hCoV-19/Spain/CT-HUB04058/2022 | R | 1366 | insSRLT | 1 | 20220211 |
| EPI_ISL_19746814 | NSP3 | hCoV-19/USA/SD-SDPHL-3933/2025 | R | 1366 | I | 41 | 20250120 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | R | 1366 | del | 74 | 20231211 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | R | 1366 | B | 1 | 20210705 |
| EPI_ISL_19690695 | NSP3 | hCoV-19/Netherlands/OV-RIVM-144896/2025 | R | 1366 | K | 1445 | 20250110 |
| EPI_ISL_2707330 | NSP3 | hCoV-19/England/OXON-F836AA/2021 | R | 1366 | H | 2 | 20210609 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | R | 1366 | N | 2 | 20230106 |
| EPI_ISL_19043857 | NSP3 | hCoV-19/Henan/KFCDC0012/2024 | R | 1366 | T | 16 | 20240409 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | R | 1366 | F | 1 | 20210915 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | R | 1366 | Y | 29 | 20230401 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | R | 1366 | L | 8 | 20230315 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | R | 1366 | E | 10 | 20220118 |
| EPI_ISL_19797192 | NSP3 | hCoV-19/Ireland/CO-CUH-SC0017/2025 | R | 1366 | S | 54 | 20250221 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | S | 1367 | F | 26 | 20220110 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | S | 1367 | del | 69 | 20231211 |
| EPI_ISL_18975870 | NSP3 | hCoV-19/USA/UT-UPHL-240207513388/2024 | S | 1367 | G | 71 | 20240127 |
| EPI_ISL_17713231 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200464567N2/2022 | S | 1367 | K | 10 | 20220922 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | S | 1367 | insstopI | 1 | 20210805 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | S | 1367 | stop | 4 | 20210915 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | S | 1367 | L | 17 | 20230401 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | S | 1367 | E | 4 | 20230315 |
| EPI_ISL_19637455 | NSP3 | hCoV-19/Russia/SPE-RII-MH213244S/2024 | S | 1367 | N | 1454 | 20241118 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | S | 1367 | Y | 2 | 20230106 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | S | 1367 | insYKFstopNstop | 1 | 20211225 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | S | 1367 | T | 5 | 20231212 |
| EPI_ISL_19336810 | NSP3 | hCoV-19/Brazil/PR-415706461/2024 | S | 1367 | C | 33 | 20240612 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | S | 1367 | Q | 1 | 20220305 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | S | 1367 | V | 11 | 20220118 |
| EPI_ISL_19453588 | NSP3 | hCoV-19/Australia/QLD0x014ACA/2024 | S | 1367 | R | 101 | 20240912 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | S | 1367 | A | 3 | 20230217 |
| EPI_ISL_19666311 | NSP3 | hCoV-19/Chile/ML-ISPC-98123/2024 | S | 1367 | I | 408 | 20241206 |
| EPI_ISL_19186527 | NSP3 | hCoV-19/USA/OH-USAFSAM-S22666/2024 | T | 1368 | F | 1 | 20240519 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | T | 1368 | Q | 11 | 20220118 |
| EPI_ISL_19479218 | NSP3 | hCoV-19/USA/NJ-CDC-LC1123694/2024 | T | 1368 | K | 188 | 20240930 |
| EPI_ISL_19823440 | NSP3 | hCoV-19/Japan/FR021-0246/2025 | T | 1368 | A | 1905 | 20250305 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | T | 1368 | H | 4 | 20230217 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | T | 1368 | E | 1 | 20210905 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | T | 1368 | S | 3 | 20211225 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1368 | del | 66 | 20231211 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1368 | W | 2 | 20220210 |
| EPI_ISL_1036640 | NSP3 | hCoV-19/USA/WY-WPHL-20165048/2020 | T | 1368 | R | 1 | 20201214 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | T | 1368 | N | 1 | 20210621 |
| EPI_ISL_12658793 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-120821-1264/2021 | T | 1368 | insKFstop | 1 | 20211208 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | T | 1368 | Y | 32 | 20230401 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | T | 1368 | V | 7 | 20230315 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | T | 1368 | L | 20 | 20230401 |
| EPI_ISL_15157242 | NSP3 | hCoV-19/India/GA-NCCS-3055200216547/2021 | T | 1368 | insFstop | 1 | 20211208 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | T | 1368 | stop | 26 | 20220110 |
| EPI_ISL_19803821 | NSP3 | hCoV-19/USA/WI-WSLH-2500690/2025 | T | 1368 | I | 883 | 20250205 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | N | 1369 | E | 4 | 20220120 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | N | 1369 | Q | 3 | 20230315 |
| EPI_ISL_17695755 | NSP3 | hCoV-19/Malaysia/MKAI-6800451/2023 | N | 1369 | K | 23 | 20230507 |
| EPI_ISL_19573117 | NSP3 | hCoV-19/Italy/EMR-IZSLER-346706-007-01/2024 | N | 1369 | B | 17 | 20241028 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | N | 1369 | del | 66 | 20231211 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | N | 1369 | G | 2 | 20210827 |
| EPI_ISL_19082608 | NSP3 | hCoV-19/USA/TX-HMH-M-140552/2024 | N | 1369 | I | 13 | 20240314 |
| EPI_ISL_16986675 | NSP3 | hCoV-19/USA/VA-CDC-LC1009414/2023 | N | 1369 | D | 29 | 20230207 |
| EPI_ISL_17713231 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200464567N2/2022 | N | 1369 | L | 5 | 20220922 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | N | 1369 | stop | 14 | 20230401 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | N | 1369 | insI | 1 | 20210807 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1369 | F | 1 | 20210318 |
| EPI_ISL_13257326 | NSP3 | hCoV-19/USA/NY-PRL-220608_01G15/2022 | N | 1369 | Y | 5 | 20220607 |
| EPI_ISL_19695435 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147468/2025 | N | 1369 | T | 146 | 20250111 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | N | 1369 | insF | 1 | 20220105 |
| EPI_ISL_18565120 | NSP3 | hCoV-19/South Korea/KDCA274598/2023 | N | 1369 | H | 33 | 20231101 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | N | 1369 | M | 1 | 20201214 |
| EPI_ISL_19822831 | NSP3 | hCoV-19/Denmark/DCGC-692101/2025 | N | 1369 | S | 442 | 20250310 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | S | 1370 | N | 2 | 20220801 |
| EPI_ISL_10082630 | NSP3 | hCoV-19/USA/ID-IBL-789866/2022 | S | 1370 | insL | 1 | 20220127 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | S | 1370 | K | 2 | 20210905 |
| EPI_ISL_5441243 | NSP3 | hCoV-19/USA/ID-IBL-758886/2021 | S | 1370 | insstop | 2 | 20210918 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | S | 1370 | T | 22 | 20230217 |
| EPI_ISL_19767736 | NSP3 | hCoV-19/USA/HI-TAMC_4024/2025 | S | 1370 | F | 2346 | 20250218 |
| EPI_ISL_19082608 | NSP3 | hCoV-19/USA/TX-HMH-M-140552/2024 | S | 1370 | L | 17 | 20240314 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | S | 1370 | C | 43 | 20230401 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | S | 1370 | R | 1 | 20220305 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | S | 1370 | I | 3 | 20230315 |
| EPI_ISL_1097309 | NSP3 | hCoV-19/Belgium/UZA-UA-CV1004514317/2021 | S | 1370 | V | 3 | 20210126 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | S | 1370 | stop | 33 | 20220110 |
| EPI_ISL_19503747 | NSP3 | hCoV-19/Russia/TAM-RII-MH202068S/2024 | S | 1370 | Y | 88 | 20240912 |
| EPI_ISL_19433121 | NSP3 | hCoV-19/USA/CO-CDPHE-42226194/2024 | S | 1370 | P | 49 | 20240731 |
| EPI_ISL_17665995 | NSP3 | hCoV-19/England/PHEC-YYEZ1MB/2023 | S | 1370 | A | 13 | 20230430 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | S | 1370 | del | 69 | 20231211 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | S | 1370 | Q | 13 | 20230401 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | S | 1370 | insG | 1 | 20210815 |
| EPI_ISL_9078962 | NSP3 | hCoV-19/USA/TN-CDC-ASC210595559/2022 | S | 1370 | H | 3 | 20220106 |
| EPI_ISL_10924594 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11813/2022 | R | 1371 | N | 10 | 20220228 |
| EPI_ISL_16258485 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2024/2022 | R | 1371 | F | 2 | 20220801 |
| EPI_ISL_19485149 | NSP3 | hCoV-19/Luxembourg/LNS0053956/2024 | R | 1371 | K | 396 | 20240919 |
| EPI_ISL_18433112 | NSP3 | hCoV-19/Slovenia/17-005477-CE/2023 | R | 1371 | G | 20 | 20230922 |
| EPI_ISL_7629977 | NSP3 | hCoV-19/Kazakhstan/KZY-NRL-1329/2021 | R | 1371 | L | 5 | 20211008 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | R | 1371 | V | 30 | 20230401 |
| EPI_ISL_19747302 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y8CU7/2025 | R | 1371 | I | 130 | 20250210 |
| EPI_ISL_16258483 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2071/2022 | R | 1371 | D | 1 | 20220728 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | R | 1371 | del | 94 | 20231211 |
| EPI_ISL_19600814 | NSP3 | hCoV-19/USA/CA-CDPH-500143564/2024 | R | 1371 | S | 59 | 20240925 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | R | 1371 | A | 2 | 20220305 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | R | 1371 | insGFIstopLFE | 1 | 20210817 |
| EPI_ISL_19082608 | NSP3 | hCoV-19/USA/TX-HMH-M-140552/2024 | R | 1371 | E | 19 | 20240314 |
| EPI_ISL_10397222 | NSP3 | hCoV-19/Turkey/HSGM-G1581/2022 | R | 1371 | W | 2 | 20220214 |
| EPI_ISL_12955480 | NSP3 | hCoV-19/Russia/LIP-CRIE-7731254614/2022 | R | 1371 | T | 5 | 20220217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 1371 | P | 2 | 20220210 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | R | 1371 | Q | 22 | 20230624 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | R | 1371 | stop | 15 | 20230315 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | R | 1371 | H | 1 | 20210905 |
| EPI_ISL_19738444 | NSP3 | hCoV-19/Chile/LR-6748/2025 | I | 1372 | V | 241 | 20250119 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | I | 1372 | del | 97 | 20231211 |
| EPI_ISL_13843042 | NSP3 | hCoV-19/Japan/OPHO-Hb69-291/2022 | I | 1372 | N | 5 | 20220706 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | I | 1372 | E | 2 | 20220210 |
| EPI_ISL_16258483 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2071/2022 | I | 1372 | Y | 1 | 20220728 |
| EPI_ISL_1490120 | NSP3 | hCoV-19/South Korea/KDCA2620/2021 | I | 1372 | M | 1 | 20210324 |
| EPI_ISL_19082608 | NSP3 | hCoV-19/USA/TX-HMH-M-140552/2024 | I | 1372 | L | 80 | 20240314 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | I | 1372 | C | 1 | 20210915 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | I | 1372 | F | 33 | 20230217 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | I | 1372 | A | 1 | 20210621 |
| EPI_ISL_11291788 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP/2022 | I | 1372 | P | 1 | 20220219 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | I | 1372 | T | 23 | 20221210 |
| EPI_ISL_15184672 | NSP3 | hCoV-19/Canada/BC-BCCDC-515371/2022 | I | 1372 | J | 2 | 20220902 |
| EPI_ISL_18679527 | NSP3 | hCoV-19/USA/CA-LACPHL-AY03973/2023 | I | 1372 | S | 9 | 20231120 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | I | 1372 | stop | 2 | 20230117 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | I | 1372 | K | 2 | 20220812 |
| EPI_ISL_16258483 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2071/2022 | K | 1373 | Y | 31 | 20220728 |
| EPI_ISL_19819795 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YE6U5/2025 | K | 1373 | N | 94 | 20250314 |
| EPI_ISL_17427521 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2867/2023 | K | 1373 | Q | 3 | 20230401 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | K | 1373 | I | 53 | 20231226 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | K | 1373 | V | 20 | 20230624 |
| EPI_ISL_18385484 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482893/2023 | K | 1373 | T | 288 | 20231004 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | K | 1373 | L | 41 | 20230401 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | K | 1373 | G | 2 | 20220812 |
| EPI_ISL_19573054 | NSP3 | hCoV-19/Thailand/NIC_BKK_1969/2024 | K | 1373 | R | 996 | 20241110 |
| EPI_ISL_19181465 | NSP3 | hCoV-19/Singapore/R29MQ195/2024 | K | 1373 | del | 117 | 20240515 |
| EPI_ISL_19543982 | NSP3 | hCoV-19/Canada/BC-BCCDC-747562/2024 | K | 1373 | E | 32 | 20241027 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | K | 1373 | P | 2 | 20210705 |
| EPI_ISL_17763811 | NSP3 | hCoV-19/USA/TX-HMH-129015/2023 | K | 1373 | S | 4 | 20230511 |
| EPI_ISL_15343378 | NSP3 | hCoV-19/Switzerland/BS-UHB-381e2ac7/2022 | K | 1373 | stop | 6 | 20220810 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | A | 1374 | L | 41 | 20230401 |
| EPI_ISL_19808363 | NSP3 | hCoV-19/Canada/ON-PHL-202504721/2025 | A | 1374 | V | 4910 | 20250306 |
| EPI_ISL_7454418 | NSP3 | hCoV-19/Sweden/UUH-000200245126N2/2021 | A | 1374 | insXX | 1 | 20211125 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | A | 1374 | I | 1 | 20200715 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | A | 1374 | del | 122 | 20231211 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | A | 1374 | N | 19 | 20230624 |
| EPI_ISL_14941328 | NSP3 | hCoV-19/USA/GA-CDC-QDX40869218/2022 | A | 1374 | G | 2 | 20220828 |
| EPI_ISL_17713231 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200464567N2/2022 | A | 1374 | stop | 3 | 20220922 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | A | 1374 | insIstop | 1 | 20220210 |
| EPI_ISL_19619193 | NSP3 | hCoV-19/Italy/LOM_Unimi-5760-24/2024 | A | 1374 | T | 146 | 20241203 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | A | 1374 | R | 2 | 20210905 |
| EPI_ISL_10082630 | NSP3 | hCoV-19/USA/ID-IBL-789866/2022 | A | 1374 | H | 8 | 20220127 |
| EPI_ISL_867153 | NSP3 | hCoV-19/England/OXON-F4C090/2020 | A | 1374 | Q | 1 | 20201229 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | A | 1374 | E | 112 | 20231212 |
| EPI_ISL_19456915 | NSP3 | hCoV-19/Netherlands/UT-RIVM-142093/2024 | A | 1374 | S | 48 | 20240913 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | A | 1374 | Y | 1 | 20210705 |
| EPI_ISL_19133082 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGY3E/2024 | A | 1374 | K | 5 | 20240427 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | S | 1375 | E | 30 | 20230401 |
| EPI_ISL_17146628 | NSP3 | hCoV-19/USA/MN-CDC-VSX-A073909/2023 | S | 1375 | T | 18 | 20230215 |
| EPI_ISL_1167125 | NSP3 | hCoV-19/Senegal/SN-MBO-201859/2021 | S | 1375 | insI | 1 | 20210127 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | S | 1375 | I | 4 | 20210915 |
| EPI_ISL_454539 | NSP3 | hCoV-19/India/MH-NIV-5815-1/2020 | S | 1375 | W | 1 | 20200412 |
| EPI_ISL_15856122 | NSP3 | hCoV-19/Trinidad and Tobago/399938/2022 | S | 1375 | N | 68 | 20221108 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | S | 1375 | del | 134 | 20231211 |
| EPI_ISL_16276670 | NSP3 | hCoV-19/USA/CA-CDC-LC0960907/2022 | S | 1375 | C | 59 | 20221210 |
| EPI_ISL_19382473 | NSP3 | hCoV-19/Canada/AB-ABPHL-122180/2024 | S | 1375 | Y | 145 | 20240823 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | S | 1375 | L | 14 | 20240218 |
| EPI_ISL_19826301 | NSP3 | hCoV-19/Canada/ON-HSC-202501571-v1/2025 | S | 1375 | F | 11741 | 20250329 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | S | 1375 | A | 147 | 20250329 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | S | 1375 | D | 23 | 20220105 |
| EPI_ISL_14311814 | NSP3 | hCoV-19/USA/DE-DHSS-B1131806/2021 | S | 1375 | H | 3 | 20210905 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | S | 1375 | V | 21 | 20230624 |
| EPI_ISL_16814937 | NSP3 | hCoV-19/United Arab Emirates/BTC-5601/2021 | S | 1375 | Q | 1 | 20210601 |
| EPI_ISL_3003679 | NSP3 | hCoV-19/Scotland/OXON-FA07D1/2021 | S | 1375 | R | 4 | 20210701 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | S | 1375 | stop | 1 | 20230117 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | S | 1375 | insKYR | 1 | 20200721 |
| EPI_ISL_16258483 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2071/2022 | S | 1375 | K | 3 | 20220728 |
| EPI_ISL_19518149 | NSP3 | hCoV-19/Finland/THL-06672/2024 | S | 1375 | P | 190 | 20240912 |
| EPI_ISL_839476 | NSP3 | hCoV-19/England/MILK-B5ADE7/2020 | S | 1375 | G | 1 | 20201106 |
| EPI_ISL_10523160 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-9828/2022 | M | 1376 | F | 5 | 20220209 |
| EPI_ISL_10082630 | NSP3 | hCoV-19/USA/ID-IBL-789866/2022 | M | 1376 | C | 7 | 20220127 |
| EPI_ISL_18603516 | NSP3 | hCoV-19/USA/GA-GPHL-1043/2023 | M | 1376 | V | 168 | 20231025 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | M | 1376 | stop | 2 | 20220812 |
| EPI_ISL_11438702 | NSP3 | hCoV-19/Ukraine/46-69013/2022 | M | 1376 | N | 1 | 20220121 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | M | 1376 | S | 1 | 20210318 |
| EPI_ISL_19481834 | NSP3 | hCoV-19/Brazil/GO-LACENGO-520576032/2024 | M | 1376 | K | 16 | 20240903 |
| EPI_ISL_18577977 | NSP3 | hCoV-19/England/CLIMB-CM7YKID9/2023 | M | 1376 | T | 72 | 20231016 |
| EPI_ISL_19755640 | NSP3 | hCoV-19/USA/IL-RIPHL_15333_G/2025 | M | 1376 | I | 1365 | 20250212 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | M | 1376 | insY | 1 | 20220120 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | M | 1376 | Y | 26 | 20220105 |
| EPI_ISL_518032 | NSP3 | hCoV-19/India/KA-IB68/2020 | M | 1376 | P | 1 | 20200621 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | M | 1376 | A | 3 | 20230117 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | M | 1376 | L | 67 | 20240218 |
| EPI_ISL_16077948 | NSP3 | hCoV-19/Spain/AS-252293734/2022 | M | 1376 | Q | 3 | 20221121 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | M | 1376 | H | 1 | 20200715 |
| EPI_ISL_18116015 | NSP3 | hCoV-19/Qatar/NIC-10-VI-0085782/2023 | M | 1376 | R | 12 | 20230810 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | M | 1376 | del | 155 | 20231211 |
| EPI_ISL_18454295 | NSP3 | hCoV-19/Thailand/NIC_SKA_8195/2023 | P | 1377 | H | 3 | 20231020 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | P | 1377 | V | 2 | 20210827 |
| EPI_ISL_19802313 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10957/2025 | P | 1377 | Q | 477 | 20250312 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | P | 1377 | R | 45 | 20240218 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | P | 1377 | Y | 24 | 20220105 |
| EPI_ISL_11291788 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP/2022 | P | 1377 | F | 7 | 20220219 |
| EPI_ISL_19551612 | NSP3 | hCoV-19/Canada/ON-PHL-202421358/2024 | P | 1377 | L | 91 | 20241108 |
| EPI_ISL_19826063 | NSP3 | hCoV-19/Singapore/Y25R15MSC47/2025 | P | 1377 | T | 311 | 20250407 |
| EPI_ISL_16394746 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2434/2022 | P | 1377 | E | 3 | 20221219 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | P | 1377 | del | 163 | 20231211 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | P | 1377 | N | 6 | 20230117 |
| EPI_ISL_19733163 | NSP3 | hCoV-19/USA/AZ-ASPHL-0104/2025 | P | 1377 | S | 727 | 20250204 |
| EPI_ISL_16405682 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1102/2022 | P | 1377 | stop | 6 | 20221210 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | P | 1377 | G | 1 | 20231212 |
| EPI_ISL_3079018 | NSP3 | hCoV-19/England/OXON-FA2809/2021 | P | 1377 | D | 1 | 20210705 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | P | 1377 | M | 2 | 20210621 |
| EPI_ISL_9923138 | NSP3 | hCoV-19/USA/UT-UPHL-220213229640/2022 | P | 1377 | C | 3 | 20220204 |
| EPI_ISL_16077948 | NSP3 | hCoV-19/Spain/AS-252293734/2022 | P | 1377 | A | 8 | 20221121 |
| EPI_ISL_11737592 | NSP3 | hCoV-19/India/KA-SLS-SEQ-10182/2021 | P | 1377 | I | 3 | 20211020 |
| EPI_ISL_12584117 | NSP3 | hCoV-19/Turkey/HSGM-G8671/2022 | P | 1377 | K | 4 | 20220407 |
| EPI_ISL_19429576 | NSP3 | hCoV-19/Spain/CL-COV48890/2024 | P | 1377 | insT | 24 | 20240816 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | T | 1378 | D | 2 | 20220105 |
| EPI_ISL_19641451 | NSP3 | hCoV-19/USA/NE-L384226011/2024 | T | 1378 | N | 784 | 20241220 |
| EPI_ISL_11767822 | NSP3 | hCoV-19/India/KA-SLS-7307/2021 | T | 1378 | J | 1 | 20210901 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | T | 1378 | A | 74 | 20250329 |
| EPI_ISL_11737569 | NSP3 | hCoV-19/India/KA-SLS-SEQ-10157/2021 | T | 1378 | Y | 1 | 20211019 |
| EPI_ISL_16394746 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2434/2022 | T | 1378 | K | 11 | 20221219 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | T | 1378 | M | 2 | 20220210 |
| EPI_ISL_19342163 | NSP3 | hCoV-19/Jordan/MOH-CPHL1080/2024 | T | 1378 | V | 8 | 20240218 |
| EPI_ISL_19706149 | NSP3 | hCoV-19/South Korea/KDCA296824/2025 | T | 1378 | I | 340 | 20250102 |
| EPI_ISL_19433678 | NSP3 | hCoV-19/USA/UT-UPHL-240920179295/2024 | T | 1378 | insM | 1 | 20240902 |
| EPI_ISL_11737576 | NSP3 | hCoV-19/India/KA-SLS-SEQ-10165/2021 | T | 1378 | stop | 1 | 20211019 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | T | 1378 | S | 61 | 20231212 |
| EPI_ISL_11743774 | NSP3 | hCoV-19/India/KA-SLS-SEQ-9057/2021 | T | 1378 | F | 3 | 20211007 |
| EPI_ISL_19361746 | NSP3 | hCoV-19/USA/PA-PHL2-A-G02-0130/2024 | T | 1378 | P | 1987 | 20240101 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1378 | del | 151 | 20231211 |
| EPI_ISL_19262549 | NSP3 | hCoV-19/USA/UT-UPHL-240709429665/2024 | T | 1378 | insMSY | 2 | 20240626 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | T | 1378 | Q | 4 | 20220506 |
| EPI_ISL_12174847 | NSP3 | hCoV-19/USA/NY-PBRI-C22A020/2022 | T | 1378 | C | 1 | 20220411 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | T | 1378 | L | 55 | 20240307 |
| EPI_ISL_16258472 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1977/2022 | T | 1378 | R | 4 | 20220812 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | T | 1379 | E | 1 | 20210905 |
| EPI_ISL_19814290 | NSP3 | hCoV-19/Luxembourg/LNS3989345/2025 | T | 1379 | A | 168 | 20250127 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | T | 1379 | K | 46 | 20230624 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | T | 1379 | P | 3 | 20231226 |
| EPI_ISL_1662309 | NSP3 | hCoV-19/India/CT-ILSGS00363/2021 | T | 1379 | F | 1 | 20210204 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | T | 1379 | Y | 1 | 20220105 |
| EPI_ISL_1051831 | NSP3 | hCoV-19/England/OXON-F653C5/2021 | T | 1379 | insR | 1 | 20210114 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | T | 1379 | G | 1 | 20220305 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | T | 1379 | stop | 2 | 20230117 |
| EPI_ISL_18791280 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048449/2023 | T | 1379 | del | 150 | 20231211 |
| EPI_ISL_19803192 | NSP3 | hCoV-19/France/IDF-IPP03536/2025 | T | 1379 | I | 2788 | 20250310 |
| EPI_ISL_1979092 | NSP3 | hCoV-19/Wales/OXON-F8183D/2021 | T | 1379 | insFVstopRLHL | 1 | 20210411 |
| EPI_ISL_19561876 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YR4F8/2024 | T | 1379 | N | 184 | 20241101 |
| EPI_ISL_8162655 | NSP3 | hCoV-19/USA/CO-CDPHE-2102420532/2021 | T | 1379 | insT | 2 | 20211203 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | T | 1379 | L | 84 | 20240307 |
| EPI_ISL_13724566 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-116/2022 | T | 1379 | V | 2 | 20220608 |
| EPI_ISL_11737598 | NSP3 | hCoV-19/India/KA-SLS-SEQ-10191/2021 | T | 1379 | Q | 2 | 20211020 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | T | 1379 | D | 2 | 20210817 |
| EPI_ISL_17372589 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2632/2022 | T | 1379 | R | 6 | 20221224 |
| EPI_ISL_19433678 | NSP3 | hCoV-19/USA/UT-UPHL-240920179295/2024 | T | 1379 | S | 44 | 20240902 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | I | 1380 | S | 4 | 20221231 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | I | 1380 | insstop | 1 | 20200729 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | I | 1380 | stop | 47 | 20230117 |
| EPI_ISL_16378747 | NSP3 | hCoV-19/Singapore/17025/2022 | I | 1380 | J | 5 | 20221227 |
| EPI_ISL_19345701 | NSP3 | hCoV-19/Canada/ON-KHS-03715-v1/2024 | I | 1380 | V | 77 | 20240808 |
| EPI_ISL_19244255 | NSP3 | hCoV-19/Netherlands/NH-RIVM-138916/2024 | I | 1380 | M | 274 | 20240620 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | I | 1380 | E | 29 | 20230401 |
| EPI_ISL_12174847 | NSP3 | hCoV-19/USA/NY-PBRI-C22A020/2022 | I | 1380 | R | 4 | 20220411 |
| EPI_ISL_19785008 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13789/2024 | I | 1380 | del | 175 | 20241202 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | I | 1380 | L | 27 | 20231226 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | I | 1380 | T | 36 | 20240307 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1380 | N | 4 | 20220210 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | I | 1380 | F | 4 | 20210414 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | I | 1380 | C | 3 | 20230217 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | I | 1380 | Y | 7 | 20230217 |
| EPI_ISL_12291383 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1117/2022 | I | 1380 | H | 1 | 20220125 |
| EPI_ISL_19409456 | NSP3 | hCoV-19/Hubei/HCDC-HG6954/2024 | I | 1380 | K | 26 | 20240819 |
| EPI_ISL_18468740 | NSP3 | hCoV-19/Bulgaria/2252/2022 | A | 1381 | Q | 48 | 20221205 |
| EPI_ISL_14992996 | NSP3 | hCoV-19/India/KA-SLS-SEQ-42081/2022 | A | 1381 | I | 5 | 20220716 |
| EPI_ISL_17275324 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45849/2023 | A | 1381 | G | 5 | 20230217 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | A | 1381 | L | 40 | 20230401 |
| EPI_ISL_9329804 | NSP3 | hCoV-19/India/KA-RFNB-4154/2022 | A | 1381 | insTVSYT | 1 | 20220119 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | A | 1381 | stop | 6 | 20230117 |
| EPI_ISL_14976162 | NSP3 | hCoV-19/India/KA-SLS-41185/2022 | A | 1381 | K | 6 | 20220704 |
| EPI_ISL_9719304 | NSP3 | hCoV-19/Germany/HH-RKI-I-503553/2022 | A | 1381 | Y | 5 | 20220128 |
| EPI_ISL_18065822 | NSP3 | hCoV-19/USA/AZ-ASPHL-2016/2023 | A | 1381 | P | 7 | 20230724 |
| EPI_ISL_17432242 | NSP3 | hCoV-19/Singapore/R23MR60/2023 | A | 1381 | E | 19 | 20230403 |
| EPI_ISL_17156055 | NSP3 | hCoV-19/Spain/MD-H12O-2382/2023 | A | 1381 | N | 2 | 20230211 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | A | 1381 | C | 5 | 20210905 |
| EPI_ISL_19785008 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13789/2024 | A | 1381 | del | 180 | 20241202 |
| EPI_ISL_11370187 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-45/2022 | A | 1381 | M | 1 | 20220220 |
| EPI_ISL_19755515 | NSP3 | hCoV-19/USA/CO-CDPHE-43017715/2025 | A | 1381 | T | 698 | 20250209 |
| EPI_ISL_16814937 | NSP3 | hCoV-19/United Arab Emirates/BTC-5601/2021 | A | 1381 | insF | 1 | 20210601 |
| EPI_ISL_18688127 | NSP3 | hCoV-19/England/CLIMB-CM7YEAWF/2023 | A | 1381 | S | 105 | 20231219 |
| EPI_ISL_3003609 | NSP3 | hCoV-19/England/OXON-F8C920/2021 | A | 1381 | D | 3 | 20210629 |
| EPI_ISL_19775288 | NSP3 | hCoV-19/Brazil/PA-IEC-25-004873/2025 | A | 1381 | V | 1804 | 20250122 |
| EPI_ISL_16394748 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2413/2022 | A | 1381 | R | 2 | 20221205 |
| EPI_ISL_9418907 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-8150/2021 | K | 1382 | stop | 6 | 20211218 |
| EPI_ISL_19785008 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13789/2024 | K | 1382 | del | 194 | 20241202 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | K | 1382 | W | 1 | 20210827 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | K | 1382 | T | 50 | 20231226 |
| EPI_ISL_14885724 | NSP3 | hCoV-19/Germany/NW-RKI-I-966237/2022 | K | 1382 | M | 7 | 20220829 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | K | 1382 | F | 2 | 20220506 |
| EPI_ISL_19802156 | NSP3 | hCoV-19/USA/CA-PFZ04808/2025 | K | 1382 | N | 9019 | 20250222 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | K | 1382 | G | 2 | 20210805 |
| EPI_ISL_2342536 | NSP3 | hCoV-19/Italy/CAM-IZSM-RD00182728/2020 | K | 1382 | D | 1 | 20201226 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | K | 1382 | H | 1 | 20230217 |
| EPI_ISL_17372589 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2632/2022 | K | 1382 | V | 11 | 20221224 |
| EPI_ISL_14680603 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-1402CTD014/2022 | K | 1382 | insFFAIVVFF | 3 | 20220202 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | K | 1382 | L | 24 | 20240307 |
| EPI_ISL_19499194 | NSP3 | hCoV-19/USA/TX-HMH-M-146381/2024 | K | 1382 | Q | 126 | 20240915 |
| EPI_ISL_19176930 | NSP3 | hCoV-19/England/CLIMB-CM7YMADX/2024 | K | 1382 | E | 68 | 20240422 |
| EPI_ISL_19826747 | NSP3 | hCoV-19/USA/MN-MDH-46610/2025 | K | 1382 | R | 409 | 20250401 |
| EPI_ISL_18468740 | NSP3 | hCoV-19/Bulgaria/2252/2022 | K | 1382 | Y | 4 | 20221205 |
| EPI_ISL_12174847 | NSP3 | hCoV-19/USA/NY-PBRI-C22A020/2022 | K | 1382 | S | 6 | 20220411 |
| EPI_ISL_11370187 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-45/2022 | K | 1382 | A | 3 | 20220220 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | N | 1383 | E | 4 | 20221231 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | N | 1383 | L | 3 | 20230217 |
| EPI_ISL_17162474 | NSP3 | hCoV-19/Zambia/CHAZ-CHS2988/2022 | N | 1383 | Y | 202 | 20221228 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | N | 1383 | stop | 2 | 20210701 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | N | 1383 | V | 4 | 20240307 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | N | 1383 | insYC | 1 | 20210319 |
| EPI_ISL_19309164 | NSP3 | hCoV-19/Spain/PV-HUD-70623844/2024 | N | 1383 | I | 16 | 20240726 |
| EPI_ISL_2466523 | NSP3 | hCoV-19/USA/OH-2747/2021 | N | 1383 | C | 1 | 20210504 |
| EPI_ISL_19785008 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13789/2024 | N | 1383 | del | 227 | 20241202 |
| EPI_ISL_19621395 | NSP3 | hCoV-19/Spain/GU-GUT-82966048/2024 | N | 1383 | K | 47 | 20241102 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | N | 1383 | G | 5 | 20230116 |
| EPI_ISL_19677116 | NSP3 | hCoV-19/Italy/LOM_ASSTMonza_6000455787_080700/2024 | N | 1383 | S | 193 | 20241210 |
| EPI_ISL_1051850 | NSP3 | hCoV-19/England/OXON-F65802/2021 | N | 1383 | insstop | 1 | 20210113 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | N | 1383 | insIKLKV | 1 | 20211222 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | N | 1383 | A | 27 | 20220811 |
| EPI_ISL_16814947 | NSP3 | hCoV-19/United Arab Emirates/BTC-5769/2021 | N | 1383 | insILCY | 1 | 20210617 |
| EPI_ISL_19479101 | NSP3 | hCoV-19/Netherlands/OV-RIVM-142672/2024 | N | 1383 | H | 1108 | 20240924 |
| EPI_ISL_17724574 | NSP3 | hCoV-19/Singapore/R34MR88/2023 | N | 1383 | B | 10 | 20230519 |
| EPI_ISL_18550678 | NSP3 | hCoV-19/USA/CA-CDPH-500124530/2023 | N | 1383 | T | 25 | 20230821 |
| EPI_ISL_9923138 | NSP3 | hCoV-19/USA/UT-UPHL-220213229640/2022 | N | 1383 | insNN | 1 | 20220204 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | N | 1383 | P | 2 | 20230117 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | N | 1383 | F | 4 | 20220721 |
| EPI_ISL_14205661 | NSP3 | hCoV-19/USA/PA-Curative-485728/2022 | N | 1383 | D | 6 | 20220718 |
| EPI_ISL_951266 | NSP3 | hCoV-19/England/OXON-F4FCB7/2021 | N | 1383 | Q | 2 | 20210111 |
| EPI_ISL_12174847 | NSP3 | hCoV-19/USA/NY-PBRI-C22A020/2022 | N | 1383 | R | 7 | 20220411 |
| EPI_ISL_19785008 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13789/2024 | T | 1384 | del | 196 | 20241202 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | T | 1384 | insRstop | 1 | 20210905 |
| EPI_ISL_10924594 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11813/2022 | T | 1384 | V | 13 | 20220228 |
| EPI_ISL_19032579 | NSP3 | hCoV-19/USA/KY-KSPHL-08188/2024 | T | 1384 | P | 4 | 20240312 |
| EPI_ISL_1979092 | NSP3 | hCoV-19/Wales/OXON-F8183D/2021 | T | 1384 | H | 1 | 20210411 |
| EPI_ISL_18980477 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-022235/2024 | T | 1384 | N | 53 | 20240206 |
| EPI_ISL_19831330 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56829/2025 | T | 1384 | S | 1148 | 20250330 |
| EPI_ISL_17372589 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2632/2022 | T | 1384 | F | 6 | 20221224 |
| EPI_ISL_1730590 | NSP3 | hCoV-19/Wales/OXON-F80A92/2021 | T | 1384 | E | 1 | 20210408 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | T | 1384 | L | 49 | 20230401 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | T | 1384 | insR | 1 | 20230217 |
| EPI_ISL_15003375 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1271/2021 | T | 1384 | K | 1 | 20210926 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | T | 1384 | Y | 2 | 20220105 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | T | 1384 | R | 1 | 20210520 |
| EPI_ISL_18468740 | NSP3 | hCoV-19/Bulgaria/2252/2022 | T | 1384 | C | 4 | 20221205 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1384 | W | 1 | 20220210 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | T | 1384 | Q | 2 | 20220305 |
| EPI_ISL_19750144 | NSP3 | hCoV-19/Canada/AB-ABPHL-131176/2025 | T | 1384 | I | 239 | 20250203 |
| EPI_ISL_8827492 | NSP3 | hCoV-19/Nigeria/MRL-OS-1917/2021 | T | 1384 | insT | 1 | 20210321 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | T | 1384 | insG | 1 | 20210806 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | T | 1384 | G | 24 | 20230624 |
| EPI_ISL_19415725 | NSP3 | hCoV-19/Italy/EMR-IZSLER-271024-004-01/2024 | T | 1384 | A | 24 | 20240812 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | T | 1384 | J | 1 | 20230410 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | T | 1384 | stop | 1 | 20211225 |
| EPI_ISL_17708637 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000039701SP/2022 | V | 1385 | insXXXXX | 1 | 20220324 |
| EPI_ISL_19803215 | NSP3 | hCoV-19/env/Germany/BY-LGL-6511733/2025 | V | 1385 | I | 964 | 20250305 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | V | 1385 | insstop | 1 | 20220105 |
| EPI_ISL_18255145 | NSP3 | hCoV-19/Pakistan/PACP-B13-S05/2023 | V | 1385 | L | 113 | 20230313 |
| EPI_ISL_19673845 | NSP3 | hCoV-19/Sichuan/GYCDC-cx586A/2024 | V | 1385 | A | 169 | 20240922 |
| EPI_ISL_14976162 | NSP3 | hCoV-19/India/KA-SLS-41185/2022 | V | 1385 | K | 2 | 20220704 |
| EPI_ISL_17712897 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000175651SP/2022 | V | 1385 | insXX | 38 | 20220804 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1385 | R | 1 | 20230101 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | V | 1385 | D | 3 | 20220305 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | V | 1385 | Y | 3 | 20230117 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | V | 1385 | C | 32 | 20230401 |
| EPI_ISL_19267139 | NSP3 | hCoV-19/France/HDF-IPP07600/2024 | V | 1385 | F | 76 | 20240624 |
| EPI_ISL_5626289 | NSP3 | hCoV-19/France/HDF-HMN-21082270507/2021 | V | 1385 | M | 1 | 20210824 |
| EPI_ISL_16815163 | NSP3 | hCoV-19/United Arab Emirates/BTC-6114/2021 | V | 1385 | insIWDYKRDAPAHIST | 1 | 20210628 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | V | 1385 | T | 12 | 20220811 |
| EPI_ISL_16258472 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1977/2022 | V | 1385 | stop | 2 | 20220812 |
| EPI_ISL_9923138 | NSP3 | hCoV-19/USA/UT-UPHL-220213229640/2022 | V | 1385 | S | 2 | 20220204 |
| EPI_ISL_19785008 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13789/2024 | V | 1385 | del | 191 | 20241202 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | V | 1385 | H | 2 | 20210414 |
| EPI_ISL_17708832 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000124146SP/2022 | V | 1385 | insXXX | 10 | 20220407 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | V | 1385 | G | 47 | 20230624 |
| EPI_ISL_2965796 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-GSEQ-4055/2021 | V | 1385 | N | 1 | 20210531 |
| EPI_ISL_6628516 | NSP3 | hCoV-19/USA/UT-UPHL-211115323957/2021 | V | 1385 | insVF | 1 | 20210925 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | K | 1386 | insYC | 1 | 20210525 |
| EPI_ISL_12294087 | NSP3 | hCoV-19/Thailand/NIC_BKK_17023/2022 | K | 1386 | I | 7 | 20220408 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | K | 1386 | F | 1 | 20210817 |
| EPI_ISL_8525494 | NSP3 | hCoV-19/Senegal/2232/2020 | K | 1386 | W | 2 | 20200402 |
| EPI_ISL_18351978 | NSP3 | hCoV-19/USA/MS-MSPHL-0735/2023 | K | 1386 | stop | 8 | 20230914 |
| EPI_ISL_8975141 | NSP3 | hCoV-19/Yunnan/FCYY8171/2021 | K | 1386 | Y | 11 | 20210817 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | K | 1386 | D | 3 | 20240307 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 1386 | L | 14 | 20230116 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | K | 1386 | A | 4 | 20220227 |
| EPI_ISL_19824737 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-032041/2025 | K | 1386 | E | 110 | 20250326 |
| EPI_ISL_17624425 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200353282N2/2022 | K | 1386 | insXX | 6 | 20220210 |
| EPI_ISL_19670060 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-144803/2024 | K | 1386 | R | 462 | 20241215 |
| EPI_ISL_19623503 | NSP3 | hCoV-19/USA/AZ-ASPHL-1950/2024 | K | 1386 | N | 839 | 20241203 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | K | 1386 | H | 2 | 20220210 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | K | 1386 | del | 203 | 20241226 |
| EPI_ISL_19147473 | NSP3 | hCoV-19/Spain/AS-HUCA-232439022/2024 | K | 1386 | Q | 30 | 20240509 |
| EPI_ISL_463900 | NSP3 | hCoV-19/Shaoxing/08/2020 | K | 1386 | insstop | 1 | 20200207 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 1386 | V | 4 | 20230101 |
| EPI_ISL_19784687 | NSP3 | hCoV-19/Japan/FR067-0284/2024 | K | 1386 | M | 15 | 20241219 |
| EPI_ISL_17474675 | NSP3 | hCoV-19/Pakistan/BATCH-02-SAMPLE02/2023 | K | 1386 | G | 19 | 20230225 |
| EPI_ISL_17723815 | NSP3 | hCoV-19/South Korea/KDCA237701/2023 | K | 1386 | T | 35 | 20230506 |
| EPI_ISL_18468740 | NSP3 | hCoV-19/Bulgaria/2252/2022 | K | 1386 | S | 4 | 20221205 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1387 | P | 1 | 20220210 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | S | 1387 | Y | 2 | 20240307 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | S | 1387 | M | 1 | 20201214 |
| EPI_ISL_19639948 | NSP3 | hCoV-19/USA/MN-MDH-44541/2024 | S | 1387 | G | 264 | 20241206 |
| EPI_ISL_17500646 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13647/2023 | S | 1387 | T | 30 | 20230318 |
| EPI_ISL_16258472 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1977/2022 | S | 1387 | stop | 1 | 20220812 |
| EPI_ISL_19495705 | NSP3 | hCoV-19/Canada/BC-BCCDC-740252/2024 | S | 1387 | I | 116 | 20240929 |
| EPI_ISL_479573 | NSP3 | hCoV-19/India/MH-NIV-SARI-4487/2020 | S | 1387 | Q | 1 | 20200412 |
| EPI_ISL_9719304 | NSP3 | hCoV-19/Germany/HH-RKI-I-503553/2022 | S | 1387 | insYF | 1 | 20220128 |
| EPI_ISL_13392927 | NSP3 | hCoV-19/Thailand/NIC_SPK_20042/2022 | S | 1387 | V | 11 | 20220603 |
| EPI_ISL_19374099 | NSP3 | hCoV-19/Japan/SUPCRC-6617/2024 | S | 1387 | C | 23 | 20240725 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | S | 1387 | del | 190 | 20241226 |
| EPI_ISL_9719304 | NSP3 | hCoV-19/Germany/HH-RKI-I-503553/2022 | S | 1387 | D | 2 | 20220128 |
| EPI_ISL_17474675 | NSP3 | hCoV-19/Pakistan/BATCH-02-SAMPLE02/2023 | S | 1387 | A | 14 | 20230225 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | S | 1387 | L | 33 | 20230401 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | S | 1387 | F | 5 | 20220210 |
| EPI_ISL_19643604 | NSP3 | hCoV-19/USA/TX-HMH-M-146674/2024 | S | 1387 | N | 195 | 20241010 |
| EPI_ISL_15262287 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL-2207/2022 | S | 1387 | K | 3 | 20220918 |
| EPI_ISL_17372614 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2643/2022 | S | 1387 | R | 37 | 20221231 |
| EPI_ISL_18255145 | NSP3 | hCoV-19/Pakistan/PACP-B13-S05/2023 | S | 1387 | H | 5 | 20230313 |
| EPI_ISL_8578797 | NSP3 | hCoV-19/Pakistan/AKU-DEC-RUN3-MIN-10/2021 | S | 1387 | E | 2 | 20211203 |
| EPI_ISL_17603087 | NSP3 | hCoV-19/Thailand/NIC_CBI_1257/2023 | V | 1388 | S | 14 | 20230410 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | V | 1388 | M | 1 | 20210621 |
| EPI_ISL_5308733 | NSP3 | hCoV-19/Sweden/UUH-000200166306/2021 | V | 1388 | insR | 1 | 20210909 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1388 | K | 1 | 20220210 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | V | 1388 | C | 3 | 20211211 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | V | 1388 | del | 191 | 20241226 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | V | 1388 | L | 69 | 20240307 |
| EPI_ISL_15740692 | NSP3 | hCoV-19/Iceland/L-2133/2022 | V | 1388 | G | 50 | 20221102 |
| EPI_ISL_19147473 | NSP3 | hCoV-19/Spain/AS-HUCA-232439022/2024 | V | 1388 | F | 45 | 20240509 |
| EPI_ISL_19817199 | NSP3 | hCoV-19/England/CLIMB-CM7YMJOA/2025 | V | 1388 | A | 171 | 20250315 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | V | 1388 | R | 3 | 20211225 |
| EPI_ISL_3504509 | NSP3 | hCoV-19/Sweden/UUH-000200116050/2021 | V | 1388 | W | 1 | 20210810 |
| EPI_ISL_16177078 | NSP3 | hCoV-19/Italy/LOM_Auxo_12158397/2022 | V | 1388 | D | 14 | 20221213 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | V | 1388 | insF | 1 | 20240307 |
| EPI_ISL_5441243 | NSP3 | hCoV-19/USA/ID-IBL-758886/2021 | V | 1388 | stop | 2 | 20210918 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | V | 1388 | T | 3 | 20220811 |
| EPI_ISL_3421844 | NSP3 | hCoV-19/England/OXON-FA8B19/2020 | V | 1388 | Y | 1 | 20201222 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | V | 1388 | insstop | 28 | 20230401 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | V | 1388 | insS | 1 | 20220210 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | V | 1388 | Q | 1 | 20220105 |
| EPI_ISL_19784008 | NSP3 | hCoV-19/USA/NJ-CDC-LC1134749/2025 | V | 1388 | I | 881 | 20250303 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | G | 1389 | N | 36 | 20230624 |
| EPI_ISL_19806428 | NSP3 | hCoV-19/Canada/ON-HRL-20251019069157-v1/2025 | G | 1389 | S | 3498 | 20250302 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1389 | H | 1 | 20220210 |
| EPI_ISL_19744199 | NSP3 | hCoV-19/Wales/CLIMB-CM7YK5FT/2025 | G | 1389 | V | 374 | 20250205 |
| EPI_ISL_11823807 | NSP3 | hCoV-19/Pakistan/AKU-10/2022 | G | 1389 | E | 2 | 20220213 |
| EPI_ISL_950937 | NSP3 | hCoV-19/England/OXON-F46E7E/2020 | G | 1389 | insWF | 1 | 20201222 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | G | 1389 | insstopI | 1 | 20210815 |
| EPI_ISL_10851659 | NSP3 | hCoV-19/Pakistan/AKU-JAN-RUN2-10/2022 | G | 1389 | stop | 8 | 20220108 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | G | 1389 | del | 153 | 20241226 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | G | 1389 | P | 1 | 20210621 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | G | 1389 | W | 3 | 20240307 |
| EPI_ISL_13306878 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG3801/2022 | G | 1389 | I | 2 | 20220427 |
| EPI_ISL_18594144 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69533133/2023 | G | 1389 | D | 18 | 20231121 |
| EPI_ISL_10138351 | NSP3 | hCoV-19/Thailand/NIC_BKK_SEQ4858/2022 | G | 1389 | R | 4 | 20220117 |
| EPI_ISL_15814028 | NSP3 | hCoV-19/Belgium/AZDelta-2244-12334/2022 | G | 1389 | A | 14 | 20221107 |
| EPI_ISL_17821637 | NSP3 | hCoV-19/Brazil/RS-LMM74543/2023 | G | 1389 | L | 5 | 20230429 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | G | 1389 | Q | 30 | 20230401 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | G | 1389 | F | 2 | 20230217 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | G | 1389 | T | 2 | 20221225 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | G | 1389 | insWHI | 1 | 20230217 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | G | 1389 | K | 1 | 20210817 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | G | 1389 | Y | 6 | 20230117 |
| EPI_ISL_19749672 | NSP3 | hCoV-19/USA/NY-CDC-QDX31410827/2025 | G | 1389 | C | 1202 | 20250204 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | G | 1389 | insstop | 2 | 20211211 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | K | 1390 | insH | 1 | 20210716 |
| EPI_ISL_17821637 | NSP3 | hCoV-19/Brazil/RS-LMM74543/2023 | K | 1390 | S | 13 | 20230429 |
| EPI_ISL_17592045 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3033/2023 | K | 1390 | V | 6 | 20230406 |
| EPI_ISL_12296480 | NSP3 | hCoV-19/France/IDF-AphpSA-OL000513/2021 | K | 1390 | W | 1 | 20211213 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | K | 1390 | Q | 11 | 20230117 |
| EPI_ISL_17372583 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2638/2022 | K | 1390 | stop | 9 | 20221228 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | K | 1390 | F | 5 | 20230217 |
| EPI_ISL_19585956 | NSP3 | hCoV-19/USA/NY-URMC-O9S1S560-1/2024 | K | 1390 | T | 38 | 20240914 |
| EPI_ISL_19368165 | NSP3 | hCoV-19/Canada/NL-NML-727038/2024 | K | 1390 | N | 753 | 20240810 |
| EPI_ISL_19572932 | NSP3 | hCoV-19/South Korea/KDCA296398/2024 | K | 1390 | R | 214 | 20241104 |
| EPI_ISL_14846542 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-139/2022 | K | 1390 | D | 1 | 20220506 |
| EPI_ISL_17759302 | NSP3 | hCoV-19/USA/UT-UPHL-891668/2023 | K | 1390 | G | 4 | 20230315 |
| EPI_ISL_1051831 | NSP3 | hCoV-19/England/OXON-F653C5/2021 | K | 1390 | H | 1 | 20210114 |
| EPI_ISL_10240341 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20701947595_IZSM_COLLI_TIGEM/2022 | K | 1390 | Y | 5 | 20220211 |
| EPI_ISL_15631546 | NSP3 | hCoV-19/Morocco/FMP468/2022 | K | 1390 | A | 4 | 20220114 |
| EPI_ISL_2420360 | NSP3 | hCoV-19/Switzerland/ZH-UZH-IMV-3ba4983e/2021 | K | 1390 | P | 2 | 20210524 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | K | 1390 | I | 17 | 20240307 |
| EPI_ISL_19010529 | NSP3 | hCoV-19/USA/CA-KP001869/2024 | K | 1390 | E | 247 | 20240317 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1390 | L | 2 | 20220210 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | K | 1390 | del | 134 | 20241226 |
| EPI_ISL_18468740 | NSP3 | hCoV-19/Bulgaria/2252/2022 | F | 1391 | stop | 6 | 20221205 |
| EPI_ISL_15631546 | NSP3 | hCoV-19/Morocco/FMP468/2022 | F | 1391 | E | 2 | 20220114 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | F | 1391 | W | 2 | 20220210 |
| EPI_ISL_19685996 | NSP3 | hCoV-19/Spain/MC-HCUVA-81234886/2024 | F | 1391 | S | 38 | 20241211 |
| EPI_ISL_7795735 | NSP3 | hCoV-19/Brazil/MG-FUNED-210101003972/2021 | F | 1391 | A | 1 | 20211206 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | F | 1391 | insVstopRLHLIIstopSHLIFLNstopstop | 1 | 20210701 |
| EPI_ISL_984295 | NSP3 | hCoV-19/Belgium/UZA-UA-2532/2021 | F | 1391 | insLIFLNstopstop | 1 | 20210127 |
| EPI_ISL_19832203 | NSP3 | hCoV-19/USA/MI-UM-10062640331/2025 | F | 1391 | L | 630 | 20250228 |
| EPI_ISL_13123415 | NSP3 | hCoV-19/Finland/VI-1983/2022 | F | 1391 | R | 7 | 20220204 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | F | 1391 | del | 103 | 20241226 |
| EPI_ISL_19065553 | NSP3 | hCoV-19/South Korea/KDCA290822/2024 | F | 1391 | C | 21 | 20240313 |
| EPI_ISL_4311671 | NSP3 | hCoV-19/England/PHEC-Z304Z3B5/2021 | F | 1391 | T | 1 | 20210827 |
| EPI_ISL_19280434 | NSP3 | hCoV-19/Italy/LOM-UNIBS-07169705/2024 | F | 1391 | I | 116 | 20240715 |
| EPI_ISL_14661374 | NSP3 | hCoV-19/USA/UT-UPHL-220822982752/2022 | F | 1391 | H | 4 | 20220726 |
| EPI_ISL_18989693 | NSP3 | hCoV-19/USA/HI-H2327960/2024 | F | 1391 | V | 54 | 20240205 |
| EPI_ISL_463900 | NSP3 | hCoV-19/Shaoxing/08/2020 | F | 1391 | D | 1 | 20200207 |
| EPI_ISL_18966981 | NSP3 | hCoV-19/South Korea/KDCA286926/2024 | F | 1391 | Y | 33 | 20240213 |
| EPI_ISL_951266 | NSP3 | hCoV-19/England/OXON-F4FCB7/2021 | F | 1391 | insLP | 1 | 20210111 |
| EPI_ISL_12296480 | NSP3 | hCoV-19/France/IDF-AphpSA-OL000513/2021 | F | 1391 | insYILstop | 1 | 20211213 |
| EPI_ISL_15306496 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-115997/2022 | F | 1391 | N | 2 | 20220917 |
| EPI_ISL_19768733 | NSP3 | hCoV-19/USA/TX-USAFSAM-S23459/2025 | C | 1392 | Y | 273 | 20250212 |
| EPI_ISL_11507524 | NSP3 | hCoV-19/Turkey/HSGM-G7395/2022 | C | 1392 | G | 6 | 20220311 |
| EPI_ISL_1249228 | NSP3 | hCoV-19/England/OXON-F716EB/2021 | C | 1392 | insstopE | 2 | 20210201 |
| EPI_ISL_7509775 | NSP3 | hCoV-19/USA/CA-CSMC669/2020 | C | 1392 | H | 1 | 20200910 |
| EPI_ISL_19696819 | NSP3 | hCoV-19/Turkey/HSGM-AA000468/2024 | C | 1392 | S | 24 | 20240222 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | C | 1392 | del | 100 | 20241226 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | C | 1392 | P | 4 | 20220227 |
| EPI_ISL_16833704 | NSP3 | hCoV-19/Thailand/DMSc-13891/2022 | C | 1392 | insLGTQL | 1 | 20220625 |
| EPI_ISL_19831395 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56895/2025 | C | 1392 | F | 5310 | 20250403 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | C | 1392 | stop | 2 | 20211225 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1392 | K | 1 | 20220210 |
| EPI_ISL_11833035 | NSP3 | hCoV-19/Turkey/HSGM-GS91/2022 | C | 1392 | insLEA | 1 | 20220308 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | C | 1392 | V | 9 | 20230116 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | C | 1392 | insSstopR | 1 | 20220120 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | C | 1392 | insstop | 1 | 20211222 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | C | 1392 | I | 11 | 20240307 |
| EPI_ISL_19094102 | NSP3 | hCoV-19/Spain/VC-CVA_CLIN-123230/2024 | C | 1392 | W | 21 | 20240102 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | C | 1392 | L | 91 | 20230412 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | C | 1392 | T | 1 | 20211222 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | C | 1392 | R | 6 | 20230117 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | L | 1393 | A | 2 | 20220305 |
| EPI_ISL_13175963 | NSP3 | hCoV-19/Turkey/HSGM-IST-00389/2022 | L | 1393 | R | 5 | 20220509 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 1393 | del | 100 | 20241226 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | L | 1393 | F | 2 | 20210525 |
| EPI_ISL_19793468 | NSP3 | hCoV-19/Spain/CB-HUMV-8778037/2025 | L | 1393 | J | 38 | 20250224 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | L | 1393 | T | 13 | 20221225 |
| EPI_ISL_17666347 | NSP3 | hCoV-19/England/PHEC-YYEZPWU/2023 | L | 1393 | P | 6 | 20230426 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | L | 1393 | G | 1 | 20220811 |
| EPI_ISL_19542193 | NSP3 | hCoV-19/USA/NY-UB-ECMC-01397/2024 | L | 1393 | V | 18 | 20240425 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | L | 1393 | M | 1 | 20220210 |
| EPI_ISL_19482827 | NSP3 | hCoV-19/Canada/ON-PHL-202415968/2024 | L | 1393 | I | 324 | 20241001 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | L | 1393 | S | 6 | 20230412 |
| EPI_ISL_15631546 | NSP3 | hCoV-19/Morocco/FMP468/2022 | L | 1393 | C | 4 | 20220114 |
| EPI_ISL_3215013 | NSP3 | hCoV-19/USA/SC-DGL-1675800/2021 | L | 1393 | insstop | 1 | 20210716 |
| EPI_ISL_17474693 | NSP3 | hCoV-19/Pakistan/BATCH-02-SAMPLE20/2023 | L | 1393 | stop | 38 | 20230320 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | L | 1393 | W | 4 | 20220227 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | L | 1393 | K | 2 | 20230117 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | L | 1393 | N | 1 | 20240307 |
| EPI_ISL_16966689 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-769/2023 | L | 1393 | Q | 19 | 20230105 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | E | 1394 | L | 1 | 20210428 |
| EPI_ISL_19750266 | NSP3 | hCoV-19/USA/CA-CDC-2-8210455/2024 | E | 1394 | D | 342 | 20241104 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | E | 1394 | S | 11 | 20220721 |
| EPI_ISL_18492850 | NSP3 | hCoV-19/Canada/AB-ABPHL-106303/2023 | E | 1394 | Z | 4 | 20231023 |
| EPI_ISL_19597527 | NSP3 | hCoV-19/Canada/BC-BCCDC-752739/2024 | E | 1394 | G | 64 | 20241115 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | E | 1394 | del | 108 | 20241226 |
| EPI_ISL_17474693 | NSP3 | hCoV-19/Pakistan/BATCH-02-SAMPLE20/2023 | E | 1394 | Q | 15 | 20230320 |
| EPI_ISL_13784000 | NSP3 | hCoV-19/USA/WI-MCRI-010121/2022 | E | 1394 | W | 2 | 20220620 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | E | 1394 | P | 1 | 20210817 |
| EPI_ISL_12955321 | NSP3 | hCoV-19/Russia/KIR-CRIE-7730596897/2022 | E | 1394 | H | 3 | 20220212 |
| EPI_ISL_19082287 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140778/2024 | E | 1394 | K | 17 | 20240405 |
| EPI_ISL_18958340 | NSP3 | hCoV-19/Peru/LIM-INS-48698/2023 | E | 1394 | V | 20 | 20231212 |
| EPI_ISL_19555851 | NSP3 | hCoV-19/USA/CO-CDPHE-42410720/2024 | E | 1394 | A | 21 | 20241030 |
| EPI_ISL_15631546 | NSP3 | hCoV-19/Morocco/FMP468/2022 | E | 1394 | F | 5 | 20220114 |
| EPI_ISL_14495331 | NSP3 | hCoV-19/India/KA-SLS36082/2022 | E | 1394 | stop | 11 | 20220512 |
| EPI_ISL_5333150 | NSP3 | hCoV-19/Russia/ORE-RII-MH36143S/2021 | E | 1394 | N | 3 | 20211009 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | E | 1394 | R | 81 | 20230412 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | E | 1394 | I | 2 | 20240307 |
| EPI_ISL_19368968 | NSP3 | hCoV-19/South Korea/KDCA294625/2024 | A | 1395 | T | 148 | 20240805 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | A | 1395 | F | 6 | 20230217 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | A | 1395 | Y | 4 | 20210621 |
| EPI_ISL_12296480 | NSP3 | hCoV-19/France/IDF-AphpSA-OL000513/2021 | A | 1395 | stop | 2 | 20211213 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | A | 1395 | del | 107 | 20241226 |
| EPI_ISL_19592972 | NSP3 | hCoV-19/USA/NY-SUNYQB-XL2976/2024 | A | 1395 | V | 498 | 20241121 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | A | 1395 | R | 8 | 20230117 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | A | 1395 | insRstopIL | 2 | 20210809 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | A | 1395 | K | 5 | 20221225 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | A | 1395 | P | 2 | 20220721 |
| EPI_ISL_19039015 | NSP3 | hCoV-19/USA/HI-H2328364/2024 | A | 1395 | S | 97 | 20240307 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | A | 1395 | E | 3 | 20211225 |
| EPI_ISL_19542085 | NSP3 | hCoV-19/Russia/SPE-RII-MH206553S/2024 | A | 1395 | D | 10 | 20241023 |
| EPI_ISL_7509775 | NSP3 | hCoV-19/USA/CA-CSMC669/2020 | A | 1395 | I | 1 | 20200910 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | A | 1395 | G | 9 | 20230412 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | A | 1395 | C | 24 | 20220105 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | A | 1395 | L | 15 | 20240307 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | S | 1396 | H | 6 | 20220104 |
| EPI_ISL_19786326 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56585/2025 | S | 1396 | L | 1996 | 20250227 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | S | 1396 | K | 5 | 20240307 |
| EPI_ISL_17969939 | NSP3 | hCoV-19/South Korea/KDCA247865/2023 | S | 1396 | T | 24 | 20230615 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | S | 1396 | E | 2 | 20210816 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | S | 1396 | F | 5 | 20230412 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | S | 1396 | R | 5 | 20220105 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | S | 1396 | I | 8 | 20220227 |
| EPI_ISL_16751791 | NSP3 | hCoV-19/France/OCC-CHU-TLS-2300711233/2023 | S | 1396 | V | 6 | 20230107 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | S | 1396 | Q | 2 | 20210915 |
| EPI_ISL_13647579 | NSP3 | hCoV-19/USA/KS-KSU-2825/2022 | S | 1396 | C | 2 | 20220620 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | S | 1396 | insMY | 1 | 20230217 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | S | 1396 | Y | 1 | 20220811 |
| EPI_ISL_15631546 | NSP3 | hCoV-19/Morocco/FMP468/2022 | S | 1396 | G | 6 | 20220114 |
| EPI_ISL_19773064 | NSP3 | hCoV-19/USA/NJ-CDC-LC1134358/2025 | S | 1396 | P | 15 | 20250224 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | S | 1396 | insstopILSRGF | 1 | 20210805 |
| EPI_ISL_17097936 | NSP3 | hCoV-19/Italy/LOM-ASST-69306863/2023 | S | 1396 | stop | 65 | 20230228 |
| EPI_ISL_11832961 | NSP3 | hCoV-19/Turkey/HSGM-GS45/2022 | S | 1396 | insEAS | 1 | 20220308 |
| EPI_ISL_19773577 | NSP3 | hCoV-19/USA/CA-CDPH-500145735/2025 | S | 1396 | A | 552 | 20250117 |
| EPI_ISL_12296480 | NSP3 | hCoV-19/France/IDF-AphpSA-OL000513/2021 | S | 1396 | W | 1 | 20211213 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | S | 1396 | N | 3 | 20220721 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | S | 1396 | del | 127 | 20241226 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | F | 1397 | G | 1 | 20220811 |
| EPI_ISL_19826623 | NSP3 | hCoV-19/USA/NY-PRL-250408_83B01/2025 | F | 1397 | L | 750 | 20250330 |
| EPI_ISL_19446233 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA11965-P0/2024 | F | 1397 | S | 61 | 20240905 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | F | 1397 | del | 127 | 20241226 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | F | 1397 | Q | 1 | 20220305 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | F | 1397 | P | 1 | 20220117 |
| EPI_ISL_5511695 | NSP3 | hCoV-19/USA/ID-IBL-758631/2021 | F | 1397 | insIIstop | 3 | 20210915 |
| EPI_ISL_11191129 | NSP3 | hCoV-19/Indonesia/SU-NIHRD-WGS_22_01862/2022 | F | 1397 | N | 4 | 20220124 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | F | 1397 | H | 1 | 20200729 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | F | 1397 | A | 5 | 20220227 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | F | 1397 | T | 3 | 20211225 |
| EPI_ISL_18638658 | NSP3 | hCoV-19/Russia/TYU-RII-MH150285S/2023 | F | 1397 | C | 14 | 20231031 |
| EPI_ISL_950937 | NSP3 | hCoV-19/England/OXON-F46E7E/2020 | F | 1397 | insFR | 1 | 20201222 |
| EPI_ISL_19544585 | NSP3 | hCoV-19/Chile/VS-76890/2024 | F | 1397 | V | 155 | 20240923 |
| EPI_ISL_19528772 | NSP3 | hCoV-19/Chile/MA-ISPC-81565/2024 | F | 1397 | I | 30 | 20241012 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | F | 1397 | R | 2 | 20210809 |
| EPI_ISL_18748369 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00018992_01/2023 | F | 1397 | Y | 15 | 20230820 |
| EPI_ISL_18385484 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482893/2023 | F | 1397 | stop | 5 | 20231004 |
| EPI_ISL_9095804 | NSP3 | hCoV-19/USA/ID-IBL-782309/2022 | F | 1397 | insT | 1 | 20220105 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | F | 1397 | insstop | 1 | 20220120 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | F | 1397 | E | 2 | 20210621 |
| EPI_ISL_18055966 | NSP3 | hCoV-19/Japan/PG-549994/2023 | N | 1398 | K | 25 | 20230629 |
| EPI_ISL_17151141 | NSP3 | hCoV-19/USA/CA-CDPH-500089490/2022 | N | 1398 | T | 28 | 20221107 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | N | 1398 | F | 1 | 20240307 |
| EPI_ISL_18936212 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00060/2023 | N | 1398 | stop | 11 | 20230412 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | N | 1398 | R | 24 | 20211227 |
| EPI_ISL_3178883 | NSP3 | hCoV-19/England/OXON-FA63F5/2020 | N | 1398 | V | 1 | 20201011 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | N | 1398 | G | 6 | 20220219 |
| EPI_ISL_15156917 | NSP3 | hCoV-19/Spain/ML-ISCIII-223280/2022 | N | 1398 | Y | 6 | 20220719 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | N | 1398 | del | 69 | 20241226 |
| EPI_ISL_7509669 | NSP3 | hCoV-19/USA/CA-CSMC551/2020 | N | 1398 | insHAFLLY | 1 | 20201014 |
| EPI_ISL_14807584 | NSP3 | hCoV-19/USA/WA-UW-22081674912/2022 | N | 1398 | I | 22 | 20220816 |
| EPI_ISL_3299568 | NSP3 | hCoV-19/Sweden/UUH-000199812604N2/2021 | N | 1398 | L | 2 | 20210428 |
| EPI_ISL_15379871 | NSP3 | hCoV-19/Germany/BE-ChVir-LB-220930-86968/2022 | N | 1398 | B | 8 | 20220920 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1398 | P | 1 | 20210318 |
| EPI_ISL_19817937 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U842-1/2025 | N | 1398 | S | 304 | 20250314 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | N | 1398 | E | 1 | 20220116 |
| EPI_ISL_19611504 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-04L-MM00058R/2024 | N | 1398 | H | 1 | 20241204 |
| EPI_ISL_19819897 | NSP3 | hCoV-19/Canada/ON-HRL-20251019266171-v1/2025 | N | 1398 | D | 135 | 20250311 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | N | 1398 | Q | 2 | 20230117 |
| EPI_ISL_18760654 | NSP3 | hCoV-19/Spain/PV-HUD-96115911/2024 | Y | 1399 | H | 40 | 20240107 |
| EPI_ISL_496792 | NSP3 | hCoV-19/Panama/334687/2020 | Y | 1399 | R | 1 | 20200331 |
| EPI_ISL_19505889 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y8GRR/2024 | Y | 1399 | C | 26 | 20241009 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | Y | 1399 | N | 3 | 20240307 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | Y | 1399 | I | 8 | 20230117 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | Y | 1399 | W | 23 | 20230624 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | Y | 1399 | T | 3 | 20221225 |
| EPI_ISL_17591342 | NSP3 | hCoV-19/Spain/CT-HUVH-E35744/2023 | Y | 1399 | F | 81 | 20230418 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1399 | L | 11 | 20230101 |
| EPI_ISL_18385485 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482866/2023 | Y | 1399 | stop | 28 | 20230921 |
| EPI_ISL_18233653 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48066/2023 | Y | 1399 | D | 13 | 20230809 |
| EPI_ISL_1097309 | NSP3 | hCoV-19/Belgium/UZA-UA-CV1004514317/2021 | Y | 1399 | insVstopRLHstopI | 1 | 20210126 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | Y | 1399 | V | 2 | 20211228 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1399 | P | 1 | 20220210 |
| EPI_ISL_14287973 | NSP3 | hCoV-19/USA/ID-IBL-838923/2022 | Y | 1399 | K | 2 | 20220721 |
| EPI_ISL_17690648 | NSP3 | hCoV-19/South Korea/KDCA235351/2023 | Y | 1399 | S | 3 | 20230425 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | Y | 1399 | del | 72 | 20241226 |
| EPI_ISL_1447828 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-6696/2021 | L | 1400 | E | 1 | 20210317 |
| EPI_ISL_16654151 | NSP3 | hCoV-19/Chile/NB-3084/2023 | L | 1400 | M | 25 | 20230109 |
| EPI_ISL_3759986 | NSP3 | hCoV-19/USA/ID-IBL-747474/2021 | L | 1400 | insstopLF | 2 | 20210809 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | L | 1400 | P | 1 | 20240307 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | L | 1400 | insstopRLHLIIstop | 2 | 20220222 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1400 | T | 1 | 20220210 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | L | 1400 | insstopKLHLTIstop | 1 | 20210915 |
| EPI_ISL_12610947 | NSP3 | hCoV-19/Pakistan/AKU-APR-R2-MIN-20/2022 | L | 1400 | stop | 10 | 20220314 |
| EPI_ISL_19533759 | NSP3 | hCoV-19/USA/CO-CDPHE-42383642/2024 | L | 1400 | S | 8 | 20241022 |
| EPI_ISL_19411489 | NSP3 | hCoV-19/South Korea/KDCA295188/2024 | L | 1400 | W | 2 | 20240820 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | L | 1400 | I | 27 | 20230117 |
| EPI_ISL_19482526 | NSP3 | hCoV-19/Brazil/TO-LABINFTEC-170562001/2023 | L | 1400 | V | 110 | 20230620 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | L | 1400 | Y | 2 | 20220811 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | L | 1400 | K | 2 | 20220305 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 1400 | del | 71 | 20241226 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | L | 1400 | A | 4 | 20220227 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | L | 1400 | N | 2 | 20211228 |
| EPI_ISL_19757051 | NSP3 | hCoV-19/Sweden/X-65006086PK/2025 | L | 1400 | F | 724 | 20250202 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | K | 1401 | F | 2 | 20210114 |
| EPI_ISL_19545918 | NSP3 | hCoV-19/Spain/VC-CVA_GRAL-126219/2024 | K | 1401 | E | 40 | 20240921 |
| EPI_ISL_19484666 | NSP3 | hCoV-19/Canada/NS-NSH-738454/2024 | K | 1401 | R | 467 | 20241004 |
| EPI_ISL_19503547 | NSP3 | hCoV-19/Russia/VOR-RII-MH202209S/2024 | K | 1401 | Q | 72 | 20240903 |
| EPI_ISL_17711372 | NSP3 | hCoV-19/Thailand/NIC_AYA_POS1698/2023 | K | 1401 | H | 5 | 20230501 |
| EPI_ISL_19385150 | NSP3 | hCoV-19/Hubei/HCDC-YC6801/2024 | K | 1401 | N | 204 | 20240813 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | K | 1401 | del | 88 | 20241226 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | K | 1401 | stop | 72 | 20230401 |
| EPI_ISL_17804017 | NSP3 | hCoV-19/Italy/LOM-69391470/2023 | K | 1401 | G | 1 | 20230602 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | K | 1401 | L | 24 | 20211227 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | K | 1401 | S | 9 | 20240307 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | K | 1401 | I | 6 | 20220120 |
| EPI_ISL_19562030 | NSP3 | hCoV-19/Spain/MD-HGUGM-65983974/2024 | K | 1401 | T | 47 | 20241018 |
| EPI_ISL_1051831 | NSP3 | hCoV-19/England/OXON-F653C5/2021 | K | 1401 | insstopstop | 1 | 20210114 |
| EPI_ISL_1097309 | NSP3 | hCoV-19/Belgium/UZA-UA-CV1004514317/2021 | K | 1401 | C | 1 | 20210126 |
| EPI_ISL_19661626 | NSP3 | hCoV-19/New Zealand/24YA7820/2024 | K | 1401 | M | 20 | 20241212 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | K | 1401 | insstopSL | 1 | 20230117 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | K | 1401 | V | 8 | 20240708 |
| EPI_ISL_16258488 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2003/2022 | K | 1401 | Y | 3 | 20220815 |
| EPI_ISL_1097309 | NSP3 | hCoV-19/Belgium/UZA-UA-CV1004514317/2021 | S | 1402 | I | 3 | 20210126 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | S | 1402 | T | 15 | 20240708 |
| EPI_ISL_19770385 | NSP3 | hCoV-19/Spain/AS-HUCA-232518204/2025 | S | 1402 | stop | 5 | 20250303 |
| EPI_ISL_15329103 | NSP3 | hCoV-19/Netherlands/NB-MVD-CWGS2203617/2022 | S | 1402 | Y | 1 | 20220926 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | S | 1402 | R | 66 | 20230401 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | S | 1402 | E | 2 | 20210114 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | S | 1402 | insstop | 1 | 20210428 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | S | 1402 | Q | 1 | 20210518 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | S | 1402 | P | 20 | 20230217 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | S | 1402 | C | 1 | 20220116 |
| EPI_ISL_15631546 | NSP3 | hCoV-19/Morocco/FMP468/2022 | S | 1402 | N | 1 | 20220114 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | S | 1402 | M | 1 | 20220210 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | S | 1402 | F | 6 | 20220120 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | S | 1402 | H | 7 | 20220222 |
| EPI_ISL_16964656 | NSP3 | hCoV-19/Japan/PG-412454/2022 | S | 1402 | A | 14 | 20221210 |
| EPI_ISL_17955980 | NSP3 | hCoV-19/USA/TX-HMH-129512/2023 | S | 1402 | L | 60 | 20230615 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | S | 1402 | del | 112 | 20241226 |
| EPI_ISL_17709042 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000100754SP/2022 | S | 1402 | V | 15 | 20220505 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | S | 1402 | K | 3 | 20240307 |
| EPI_ISL_19001684 | NSP3 | hCoV-19/South Korea/KDCA288238/2024 | P | 1403 | A | 4 | 20240220 |
| EPI_ISL_11825798 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K037141/2022 | P | 1403 | insIKDFGGF | 1 | 20220305 |
| EPI_ISL_17804017 | NSP3 | hCoV-19/Italy/LOM-69391470/2023 | P | 1403 | N | 3 | 20230602 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | P | 1403 | I | 2 | 20221211 |
| EPI_ISL_19761769 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U291-1/2025 | P | 1403 | T | 135 | 20250212 |
| EPI_ISL_19550262 | NSP3 | hCoV-19/Sichuan/GZZCDC-012/2024 | P | 1403 | H | 239 | 20240704 |
| EPI_ISL_17723783 | NSP3 | hCoV-19/South Korea/KDCA237668/2023 | P | 1403 | F | 3 | 20230506 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | P | 1403 | C | 1 | 20230217 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | P | 1403 | G | 1 | 20210414 |
| EPI_ISL_19392699 | NSP3 | hCoV-19/Liaoning/LNCDC-312-2/2024 | P | 1403 | R | 51 | 20240820 |
| EPI_ISL_12955756 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733749339/2022 | P | 1403 | Y | 3 | 20220227 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | P | 1403 | del | 96 | 20241226 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | P | 1403 | V | 7 | 20210801 |
| EPI_ISL_19824254 | NSP3 | hCoV-19/USA/IL-RIPHL_124031_G/2025 | P | 1403 | S | 4756 | 20250313 |
| EPI_ISL_479573 | NSP3 | hCoV-19/India/MH-NIV-SARI-4487/2020 | P | 1403 | E | 1 | 20200412 |
| EPI_ISL_16258488 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2003/2022 | P | 1403 | D | 5 | 20220815 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | P | 1403 | M | 1 | 20220811 |
| EPI_ISL_19798064 | NSP3 | hCoV-19/Spain/CT-HUB-09377/2025 | P | 1403 | L | 1271 | 20250109 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | P | 1403 | insL | 1 | 20230101 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1403 | K | 2 | 20220210 |
| EPI_ISL_15329103 | NSP3 | hCoV-19/Netherlands/NB-MVD-CWGS2203617/2022 | P | 1403 | stop | 5 | 20220926 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | N | 1404 | G | 24 | 20230401 |
| EPI_ISL_18730079 | NSP3 | hCoV-19/Canada/AB-ABPHL-111920/2023 | N | 1404 | K | 58 | 20231226 |
| EPI_ISL_12955340 | NSP3 | hCoV-19/Russia/MAG-CRIE-7730613297/2022 | N | 1404 | D | 7 | 20220212 |
| EPI_ISL_5511695 | NSP3 | hCoV-19/USA/ID-IBL-758631/2021 | N | 1404 | insstopstopILstopFGFYYstopV | 4 | 20210915 |
| EPI_ISL_15329103 | NSP3 | hCoV-19/Netherlands/NB-MVD-CWGS2203617/2022 | N | 1404 | V | 1 | 20220926 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | N | 1404 | P | 1 | 20220210 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | N | 1404 | insI | 1 | 20200729 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1404 | M | 1 | 20210318 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | N | 1404 | F | 9 | 20220227 |
| EPI_ISL_1051831 | NSP3 | hCoV-19/England/OXON-F653C5/2021 | N | 1404 | Q | 1 | 20210114 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | N | 1404 | insC | 1 | 20230217 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | N | 1404 | Y | 21 | 20240307 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | N | 1404 | H | 62 | 20230401 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | N | 1404 | del | 117 | 20241226 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | N | 1404 | R | 5 | 20230217 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | N | 1404 | L | 4 | 20211228 |
| EPI_ISL_3421909 | NSP3 | hCoV-19/England/OXON-FA9626/2021 | N | 1404 | insGFYYstopV | 1 | 20210712 |
| EPI_ISL_19602922 | NSP3 | hCoV-19/Thailand/MTM_01_1892/2024 | N | 1404 | S | 339 | 20240821 |
| EPI_ISL_15631546 | NSP3 | hCoV-19/Morocco/FMP468/2022 | N | 1404 | A | 3 | 20220114 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1404 | I | 20 | 20230101 |
| EPI_ISL_19351739 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242778/2024 | N | 1404 | stop | 17 | 20240708 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | N | 1404 | insstop | 1 | 20210114 |
| EPI_ISL_13512405 | NSP3 | hCoV-19/Singapore/7277/2022 | N | 1404 | B | 11 | 20220621 |
| EPI_ISL_5345801 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-58188/2021 | N | 1404 | insNFstop | 1 | 20210824 |
| EPI_ISL_17990593 | NSP3 | hCoV-19/Sweden/O-14_SE300_DC23-005459/2023 | N | 1404 | T | 15 | 20230713 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | F | 1405 | insstopT | 9 | 20230106 |
| EPI_ISL_16069198 | NSP3 | hCoV-19/USA/NV-ASC-210988921/2022 | F | 1405 | Y | 10 | 20221109 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | F | 1405 | E | 2 | 20210428 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | F | 1405 | stop | 3 | 20221211 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1405 | D | 1 | 20220210 |
| EPI_ISL_16258494 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2033/2022 | F | 1405 | I | 16 | 20220812 |
| EPI_ISL_19324874 | NSP3 | hCoV-19/Spain/PV-HUD-97028932/2024 | F | 1405 | S | 15 | 20240804 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | F | 1405 | insFstopT | 34 | 20230401 |
| EPI_ISL_5345801 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-58188/2021 | F | 1405 | T | 1 | 20210824 |
| EPI_ISL_5511691 | NSP3 | hCoV-19/USA/ID-IBL-758629/2021 | F | 1405 | insIstopLFEVTstopFFstopT | 2 | 20210916 |
| EPI_ISL_19435846 | NSP3 | hCoV-19/Sweden/X-42105880PK/2024 | F | 1405 | L | 123 | 20240913 |
| EPI_ISL_17711372 | NSP3 | hCoV-19/Thailand/NIC_AYA_POS1698/2023 | F | 1405 | C | 73 | 20230501 |
| EPI_ISL_16258482 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2062/2022 | F | 1405 | M | 2 | 20220730 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | F | 1405 | del | 110 | 20241226 |
| EPI_ISL_12955654 | NSP3 | hCoV-19/Russia/MOW-CRIE-7732913955/2022 | F | 1405 | V | 7 | 20220220 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | F | 1405 | N | 1 | 20240307 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | F | 1405 | insIIstop | 60 | 20230401 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | F | 1405 | insLNstopstopILstopFGFYYstopVFAstopVLstop | 1 | 20220117 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | S | 1406 | G | 2 | 20211228 |
| EPI_ISL_842174 | NSP3 | hCoV-19/England/QEUH-A8C8FB/2020 | S | 1406 | H | 2 | 20201016 |
| EPI_ISL_19413143 | NSP3 | hCoV-19/USA/IL-RIPHL_123424_G/2024 | S | 1406 | P | 705 | 20240827 |
| EPI_ISL_16258472 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1977/2022 | S | 1406 | N | 6 | 20220812 |
| EPI_ISL_3003375 | NSP3 | hCoV-19/England/OXON-F8B208/2020 | S | 1406 | E | 2 | 20201129 |
| EPI_ISL_3003375 | NSP3 | hCoV-19/England/OXON-F8B208/2020 | S | 1406 | insLYstopC | 2 | 20201129 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | S | 1406 | V | 9 | 20211228 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | S | 1406 | M | 1 | 20221225 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1406 | L | 6 | 20230101 |
| EPI_ISL_9904938 | NSP3 | hCoV-19/Italy/VEN-OR01P18488/2021 | S | 1406 | insstopTD | 1 | 20211202 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | S | 1406 | del | 132 | 20241226 |
| EPI_ISL_18495570 | NSP3 | hCoV-19/Gansu/QYCDC-883/2023 | S | 1406 | A | 259 | 20230829 |
| EPI_ISL_17744303 | NSP3 | hCoV-19/USA/MO-20MU10213NPS/2021 | S | 1406 | stop | 3 | 20211230 |
| EPI_ISL_19794258 | NSP3 | hCoV-19/Singapore/Y25R12MSC66/2025 | S | 1406 | F | 9234 | 20250313 |
| EPI_ISL_19573243 | NSP3 | hCoV-19/USA/CT-DPH-1253816001/2024 | S | 1406 | T | 23 | 20241007 |
| EPI_ISL_19822336 | NSP3 | hCoV-19/New Zealand/25YA0779/2025 | S | 1406 | Y | 153 | 20250312 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | S | 1406 | I | 25 | 20230401 |
| EPI_ISL_1305524 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-31001/2021 | S | 1406 | insXTD | 1 | 20210302 |
| EPI_ISL_18917491 | NSP3 | hCoV-19/Canada/AB-ABPHL-114708/2024 | S | 1406 | C | 8 | 20240209 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | S | 1406 | R | 2 | 20220120 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | S | 1406 | D | 46 | 20230401 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | K | 1407 | L | 3 | 20230217 |
| EPI_ISL_12753381 | NSP3 | hCoV-19/Russia/LIP-CRIE-7728244992/2022 | K | 1407 | Y | 1 | 20220207 |
| EPI_ISL_16339042 | NSP3 | hCoV-19/South Korea/KDCA179633/2022 | K | 1407 | E | 26 | 20221202 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | K | 1407 | D | 2 | 20230117 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | K | 1407 | H | 65 | 20230401 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | K | 1407 | Q | 28 | 20230624 |
| EPI_ISL_18512006 | NSP3 | hCoV-19/USA/RI-RISHL-060889/2023 | K | 1407 | N | 30 | 20231002 |
| EPI_ISL_1833056 | NSP3 | hCoV-19/Scotland/OXON-F515F3/2020 | K | 1407 | G | 1 | 20201229 |
| EPI_ISL_5235652 | NSP3 | hCoV-19/USA/FL-CDC-ASC210084102/2021 | K | 1407 | insC | 1 | 20210912 |
| EPI_ISL_19748150 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00021334_01/2024 | K | 1407 | T | 12 | 20240610 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | K | 1407 | S | 5 | 20240307 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | K | 1407 | del | 116 | 20241226 |
| EPI_ISL_19232175 | NSP3 | hCoV-19/Japan/FR066-0057/2024 | K | 1407 | I | 11 | 20240604 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | K | 1407 | V | 1 | 20210518 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | K | 1407 | stop | 51 | 20230401 |
| EPI_ISL_17804017 | NSP3 | hCoV-19/Italy/LOM-69391470/2023 | K | 1407 | A | 5 | 20230602 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1407 | W | 1 | 20201214 |
| EPI_ISL_19501739 | NSP3 | hCoV-19/France/BRE-IPP11398/2024 | K | 1407 | R | 137 | 20240923 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | K | 1407 | C | 1 | 20221224 |
| EPI_ISL_1051831 | NSP3 | hCoV-19/England/OXON-F653C5/2021 | K | 1407 | F | 2 | 20210114 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | L | 1408 | S | 2 | 20220110 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | L | 1408 | Y | 53 | 20230401 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | L | 1408 | A | 2 | 20240307 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 1408 | del | 118 | 20241226 |
| EPI_ISL_19479185 | NSP3 | hCoV-19/USA/NJ-CDC-LC1123468/2024 | L | 1408 | V | 24 | 20240928 |
| EPI_ISL_19498391 | NSP3 | hCoV-19/Hong Kong/VB24318468/2024 | L | 1408 | M | 239 | 20241010 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | L | 1408 | stop | 3 | 20210812 |
| EPI_ISL_2191605 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-32960/2020 | L | 1408 | insXKY | 1 | 20201216 |
| EPI_ISL_7178782 | NSP3 | hCoV-19/USA/TN-CDC-ASC210425896/2021 | L | 1408 | insMAIFIQ | 1 | 20211118 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1408 | E | 1 | 20201214 |
| EPI_ISL_19412215 | NSP3 | hCoV-19/Italy/LOM_IZSLER_273910_5/2024 | L | 1408 | Q | 11 | 20240816 |
| EPI_ISL_18857890 | NSP3 | hCoV-19/India/KA-RFNB-20978/2023 | L | 1408 | P | 15 | 20231229 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | L | 1408 | F | 20 | 20220126 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | L | 1408 | T | 5 | 20230117 |
| EPI_ISL_17294398 | NSP3 | hCoV-19/South Korea/KDCA221668/2023 | L | 1408 | R | 12 | 20230303 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | L | 1408 | C | 1 | 20210817 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | L | 1408 | I | 6 | 20230217 |
| EPI_ISL_16258494 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2033/2022 | L | 1408 | G | 2 | 20220812 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | I | 1409 | A | 1 | 20201214 |
| EPI_ISL_16258498 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1984/2022 | I | 1409 | S | 3 | 20220730 |
| EPI_ISL_19831280 | NSP3 | hCoV-19/Japan/FR050-0089/2025 | I | 1409 | L | 201 | 20250407 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | I | 1409 | C | 4 | 20220116 |
| EPI_ISL_16552264 | NSP3 | hCoV-19/Austria/AGES-195562/2022 | I | 1409 | K | 6 | 20220718 |
| EPI_ISL_5511695 | NSP3 | hCoV-19/USA/ID-IBL-758631/2021 | I | 1409 | insstopSTQP | 8 | 20210915 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | I | 1409 | del | 149 | 20241226 |
| EPI_ISL_19662358 | NSP3 | hCoV-19/Singapore/R67MQ74/2024 | I | 1409 | T | 443 | 20241216 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | I | 1409 | Y | 54 | 20230401 |
| EPI_ISL_5933493 | NSP3 | hCoV-19/Chile/LR-UACH-00407/2021 | I | 1409 | insMSLLQP | 1 | 20211027 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | I | 1409 | E | 2 | 20240307 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 1409 | D | 2 | 20230101 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | I | 1409 | N | 2 | 20220623 |
| EPI_ISL_19680402 | NSP3 | hCoV-19/Japan/TKYnat18273/2024 | I | 1409 | M | 91 | 20241229 |
| EPI_ISL_19752436 | NSP3 | hCoV-19/Poland/WSSEGorzow-25S0021/2025 | I | 1409 | V | 1340 | 20250219 |
| EPI_ISL_10602028 | NSP3 | hCoV-19/USA/AZ-TG1247111/2022 | I | 1409 | insKYY | 1 | 20220207 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | I | 1409 | R | 7 | 20221224 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | I | 1409 | stop | 2 | 20210812 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | I | 1409 | P | 1 | 20220117 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | I | 1409 | insQP | 1 | 20221225 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | I | 1409 | F | 25 | 20230401 |
| EPI_ISL_17432113 | NSP3 | hCoV-19/Singapore/R22MR499/2023 | I | 1409 | J | 12 | 20230329 |
| EPI_ISL_17630599 | NSP3 | hCoV-19/Canada/ON-PHL-23-23064/2023 | N | 1410 | D | 60 | 20230501 |
| EPI_ISL_19589624 | NSP3 | hCoV-19/Philippines/PH-RITM-4738/2024 | N | 1410 | T | 317 | 20241009 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | N | 1410 | L | 12 | 20240307 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | N | 1410 | A | 1 | 20210414 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | N | 1410 | K | 72 | 20230624 |
| EPI_ISL_16814942 | NSP3 | hCoV-19/United Arab Emirates/BTC-5883/2021 | N | 1410 | insLNstopstop | 2 | 20210617 |
| EPI_ISL_16092769 | NSP3 | hCoV-19/Singapore/15279/2022 | N | 1410 | B | 6 | 20221115 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | N | 1410 | R | 2 | 20220210 |
| EPI_ISL_17275325 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45850/2023 | N | 1410 | Q | 2 | 20230217 |
| EPI_ISL_15827873 | NSP3 | hCoV-19/USA/NY-PRL-221114_01I18/2022 | N | 1410 | I | 10 | 20221108 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | N | 1410 | E | 22 | 20230401 |
| EPI_ISL_18938487 | NSP3 | hCoV-19/USA/CA-LACPHL-AY05384/2024 | N | 1410 | H | 23 | 20240123 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | N | 1410 | F | 63 | 20230401 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | N | 1410 | V | 2 | 20220811 |
| EPI_ISL_19793782 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-10C-MM00123R/2025 | N | 1410 | S | 1536 | 20250310 |
| EPI_ISL_3178738 | NSP3 | hCoV-19/England/OXON-FA55A5/2021 | N | 1410 | insNstopVFAstopVLstopSTQPL | 1 | 20210716 |
| EPI_ISL_16258498 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1984/2022 | N | 1410 | G | 2 | 20220730 |
| EPI_ISL_18068288 | NSP3 | hCoV-19/South Korea/KDCA254853/2023 | N | 1410 | Y | 8 | 20230715 |
| EPI_ISL_15329103 | NSP3 | hCoV-19/Netherlands/NB-MVD-CWGS2203617/2022 | N | 1410 | stop | 8 | 20220926 |
| EPI_ISL_16258494 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2033/2022 | N | 1410 | C | 2 | 20220812 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | N | 1410 | del | 143 | 20241226 |
| EPI_ISL_19332929 | NSP3 | hCoV-19/Norway/1288/2024 | I | 1411 | T | 118 | 20240204 |
| EPI_ISL_17275331 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45856/2023 | I | 1411 | S | 20 | 20230217 |
| EPI_ISL_13812262 | NSP3 | hCoV-19/USA/ID-IBL-831339/2022 | I | 1411 | stop | 6 | 20220623 |
| EPI_ISL_18311658 | NSP3 | hCoV-19/USA/HI-H2324593/2023 | I | 1411 | L | 155 | 20230810 |
| EPI_ISL_14584696 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16381/2022 | I | 1411 | N | 7 | 20220726 |
| EPI_ISL_984265 | NSP3 | hCoV-19/Belgium/UZA-UA-7094/2021 | I | 1411 | insT | 1 | 20210122 |
| EPI_ISL_19497459 | NSP3 | hCoV-19/env/Romania/IVN-I71/2023 | I | 1411 | Y | 5 | 20230801 |
| EPI_ISL_16242024 | NSP3 | hCoV-19/Japan/RIMD15782/2022 | I | 1411 | F | 23 | 20220728 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | I | 1411 | insTTN | 4 | 20220227 |
| EPI_ISL_951124 | NSP3 | hCoV-19/England/OXON-F4AFA4/2021 | I | 1411 | P | 1 | 20210105 |
| EPI_ISL_7777508 | NSP3 | hCoV-19/USA/NC-WFSM-1085-1040/2021 | I | 1411 | A | 1 | 20211207 |
| EPI_ISL_17844327 | NSP3 | hCoV-19/USA/un-KDHE-2328460/2022 | I | 1411 | M | 51 | 20220803 |
| EPI_ISL_10082630 | NSP3 | hCoV-19/USA/ID-IBL-789866/2022 | I | 1411 | insstop | 2 | 20220127 |
| EPI_ISL_2157983 | NSP3 | hCoV-19/Turkey/HSGM-11586/2021 | I | 1411 | insIIC | 1 | 20210311 |
| EPI_ISL_8179180 | NSP3 | hCoV-19/USA/WI-CDC-ASC210625270/2021 | I | 1411 | insPPALQR | 1 | 20211215 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | I | 1411 | G | 2 | 20220811 |
| EPI_ISL_3299301 | NSP3 | hCoV-19/Sweden/UUH-000199329575/2021 | I | 1411 | insXX | 1 | 20210422 |
| EPI_ISL_10220294 | NSP3 | hCoV-19/France/GES-HMN-22022040848/2022 | I | 1411 | D | 1 | 20220110 |
| EPI_ISL_16354122 | NSP3 | hCoV-19/Italy/LOM-ASST-69251961/2022 | I | 1411 | R | 2 | 20221227 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | I | 1411 | del | 122 | 20241226 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | I | 1411 | insNstopstop | 57 | 20230401 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | I | 1411 | C | 3 | 20240307 |
| EPI_ISL_19826287 | NSP3 | hCoV-19/Canada/ON-HSC-202501557-v1/2025 | I | 1411 | V | 845 | 20250325 |
| EPI_ISL_17506920 | NSP3 | hCoV-19/Sweden/03_SE600_000200342817N2/2022 | I | 1411 | J | 3 | 20220127 |
| EPI_ISL_14783129 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004421168/2022 | I | 1411 | insXXXXX | 1 | 20220210 |
| EPI_ISL_17207344 | NSP3 | hCoV-19/Singapore/R19MR38/2023 | I | 1412 | J | 10 | 20230302 |
| EPI_ISL_17711372 | NSP3 | hCoV-19/Thailand/NIC_AYA_POS1698/2023 | I | 1412 | L | 55 | 20230501 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 1412 | insstop | 1 | 20230101 |
| EPI_ISL_3790633 | NSP3 | hCoV-19/Sweden/10038346/2021 | I | 1412 | Q | 1 | 20210323 |
| EPI_ISL_19802599 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11041/2025 | I | 1412 | T | 733387 | 20250307 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | I | 1412 | Y | 1 | 20220210 |
| EPI_ISL_18468743 | NSP3 | hCoV-19/Bulgaria/s6948/2022 | I | 1412 | R | 5 | 20220426 |
| EPI_ISL_961352 | NSP3 | hCoV-19/Belgium/UZA-UA-2102/2021 | I | 1412 | insFLNstopstopILstop | 1 | 20210125 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | I | 1412 | stop | 12 | 20220117 |
| EPI_ISL_468152 | NSP3 | hCoV-19/Romania/Bucuresti-14251/2020 | I | 1412 | insstopSTQPLLstop | 1 | 20200416 |
| EPI_ISL_19718678 | NSP3 | hCoV-19/USA/CO-CDPHE-42909565/2025 | I | 1412 | V | 525 | 20250128 |
| EPI_ISL_16258494 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2033/2022 | I | 1412 | S | 6 | 20220812 |
| EPI_ISL_7777508 | NSP3 | hCoV-19/USA/NC-WFSM-1085-1040/2021 | I | 1412 | D | 1 | 20211207 |
| EPI_ISL_2754069 | NSP3 | hCoV-19/USA/WY-WYPHL-21044038/2021 | I | 1412 | A | 5 | 20210612 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | I | 1412 | del | 92 | 20241226 |
| EPI_ISL_8812970 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-102921-1222/2021 | I | 1412 | insstopstopILstop | 2 | 20211029 |
| EPI_ISL_951124 | NSP3 | hCoV-19/England/OXON-F4AFA4/2021 | I | 1412 | insLstop | 1 | 20210105 |
| EPI_ISL_16258498 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1984/2022 | I | 1412 | C | 2 | 20220730 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | I | 1412 | F | 3 | 20240307 |
| EPI_ISL_19810437 | NSP3 | hCoV-19/Portugal/PT52417/2025 | I | 1412 | M | 342 | 20250225 |
| EPI_ISL_15388719 | NSP3 | hCoV-19/Italy/EMR_AUSL_C101-22-37/2022 | I | 1412 | K | 13 | 20221008 |
| EPI_ISL_18980823 | NSP3 | hCoV-19/USA/TX-HMH-M-139938/2024 | I | 1412 | N | 8 | 20240224 |
| EPI_ISL_5511691 | NSP3 | hCoV-19/USA/ID-IBL-758629/2021 | I | 1412 | G | 2 | 20210916 |
| EPI_ISL_999176 | NSP3 | hCoV-19/England/OXON-F580DD/2021 | I | 1412 | insQPLLstop | 1 | 20210118 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | I | 1412 | H | 3 | 20210521 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | I | 1413 | insCLPR | 2 | 20211225 |
| EPI_ISL_19824745 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-031569/2025 | I | 1413 | M | 22 | 20250313 |
| EPI_ISL_15740369 | NSP3 | hCoV-19/Singapore/14480/2022 | I | 1413 | J | 5 | 20221103 |
| EPI_ISL_18468743 | NSP3 | hCoV-19/Bulgaria/s6948/2022 | I | 1413 | insLPR | 1 | 20220426 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | I | 1413 | insstopSHL | 2 | 20211228 |
| EPI_ISL_18468743 | NSP3 | hCoV-19/Bulgaria/s6948/2022 | I | 1413 | C | 1 | 20220426 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | I | 1413 | A | 3 | 20220811 |
| EPI_ISL_18980823 | NSP3 | hCoV-19/USA/TX-HMH-M-139938/2024 | I | 1413 | L | 137 | 20240224 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | I | 1413 | insTIKCLPR | 44 | 20230401 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | I | 1413 | insstopS | 4 | 20210816 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | I | 1413 | insLVFTIKCLPR | 1 | 20210802 |
| EPI_ISL_19700450 | NSP3 | hCoV-19/Israel/ICH-741227223/2025 | I | 1413 | T | 665 | 20250111 |
| EPI_ISL_19429099 | NSP3 | hCoV-19/USA/NY-URMC-O8S1Q917-1/2024 | I | 1413 | F | 291 | 20240831 |
| EPI_ISL_19671446 | NSP3 | hCoV-19/Finland/THL-09792/2024 | I | 1413 | S | 81 | 20241204 |
| EPI_ISL_1249105 | NSP3 | hCoV-19/England/OXON-F6D187/2021 | I | 1413 | E | 1 | 20210210 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | I | 1413 | del | 88 | 20241226 |
| EPI_ISL_19194335 | NSP3 | hCoV-19/Japan/FR302-0746/2024 | I | 1413 | N | 12 | 20240520 |
| EPI_ISL_14627150 | NSP3 | hCoV-19/USA/CA-HLX-STM-K4UYSJW2J/2022 | I | 1413 | Y | 8 | 20220808 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | I | 1413 | stop | 22 | 20230401 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | I | 1413 | K | 3 | 20240307 |
| EPI_ISL_4309011 | NSP3 | hCoV-19/England/PHEC-Y30AY0D6/2021 | I | 1413 | insFTIKCLPR | 1 | 20210916 |
| EPI_ISL_19015382 | NSP3 | hCoV-19/USA/NY-SUNYQB-X9165/2024 | I | 1413 | V | 165 | 20240305 |
| EPI_ISL_19718670 | NSP3 | hCoV-19/USA/CO-CDPHE-42909549/2025 | W | 1414 | C | 1512 | 20250127 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | W | 1414 | H | 4 | 20210816 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | W | 1414 | Y | 6 | 20220120 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | W | 1414 | I | 5 | 20211228 |
| EPI_ISL_19800184 | NSP3 | hCoV-19/Japan/FR048-0068/2025 | W | 1414 | L | 390 | 20250225 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | W | 1414 | Q | 33 | 20210419 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | W | 1414 | A | 3 | 20220811 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | W | 1414 | del | 82 | 20241226 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | W | 1414 | F | 108 | 20230401 |
| EPI_ISL_11593185 | NSP3 | hCoV-19/England/LSPA-3C3106B/2022 | W | 1414 | G | 19 | 20220324 |
| EPI_ISL_17815999 | NSP3 | hCoV-19/Singapore/R41MR73/2023 | W | 1414 | stop | 69 | 20230612 |
| EPI_ISL_18980823 | NSP3 | hCoV-19/USA/TX-HMH-M-139938/2024 | W | 1414 | V | 27 | 20240224 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | W | 1414 | D | 1 | 20220210 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | W | 1414 | R | 46 | 20240307 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | W | 1414 | insLQRRL | 1 | 20210817 |
| EPI_ISL_19228091 | NSP3 | hCoV-19/Singapore/R37MQ83/2024 | W | 1414 | S | 10 | 20240603 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | W | 1414 | T | 6 | 20220227 |
| EPI_ISL_999011 | NSP3 | hCoV-19/England/OXON-F53A3E/2021 | F | 1415 | K | 1 | 20210104 |
| EPI_ISL_15329103 | NSP3 | hCoV-19/Netherlands/NB-MVD-CWGS2203617/2022 | F | 1415 | A | 1 | 20220926 |
| EPI_ISL_19177214 | NSP3 | hCoV-19/Guam/GU_PHL_355060/2024 | F | 1415 | S | 72 | 20240506 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | F | 1415 | del | 77 | 20241226 |
| EPI_ISL_3178778 | NSP3 | hCoV-19/England/OXON-FA58F7/2021 | F | 1415 | insNCV | 1 | 20210717 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | F | 1415 | stop | 15 | 20220117 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | F | 1415 | R | 4 | 20220227 |
| EPI_ISL_16447644 | NSP3 | hCoV-19/Italy/LOM-ASST-69257702/2023 | F | 1415 | I | 6 | 20230102 |
| EPI_ISL_17711372 | NSP3 | hCoV-19/Thailand/NIC_AYA_POS1698/2023 | F | 1415 | C | 27 | 20230501 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1415 | H | 2 | 20210318 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | F | 1415 | T | 17 | 20221018 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | F | 1415 | insGFYYstopVFAstopVLstopSTQPLLstopVFstop | 40 | 20220910 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | F | 1415 | G | 1 | 20220110 |
| EPI_ISL_17431949 | NSP3 | hCoV-19/Singapore/R22MR242/2023 | F | 1415 | Y | 16 | 20230327 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1415 | P | 2 | 20220210 |
| EPI_ISL_10820011 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-79367/2022 | F | 1415 | insstopTDKYYN | 5 | 20220112 |
| EPI_ISL_600434 | NSP3 | hCoV-19/Bangladesh/203/2020 | F | 1415 | insstopTDKYYNLV | 1 | 20200409 |
| EPI_ISL_1309764 | NSP3 | hCoV-19/England/OXON-F76358/2021 | F | 1415 | insstopVFAstopVLstopSTQPLLstopVFstop | 1 | 20210215 |
| EPI_ISL_19323587 | NSP3 | hCoV-19/env/Germany/BY-LGL-6304463/2024 | F | 1415 | V | 59 | 20240724 |
| EPI_ISL_8718063 | NSP3 | hCoV-19/USA/ID-IBL-781558/2022 | F | 1415 | insYYstopVFAstopVLstopSTQPLLstopVFstop | 3 | 20220103 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | F | 1415 | L | 73 | 20240307 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | L | 1416 | G | 19 | 20230401 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | L | 1416 | N | 49 | 20230401 |
| EPI_ISL_18980823 | NSP3 | hCoV-19/USA/TX-HMH-M-139938/2024 | L | 1416 | T | 15 | 20240224 |
| EPI_ISL_19750100 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00021915_01/2024 | L | 1416 | F | 103 | 20240827 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | L | 1416 | M | 1 | 20211228 |
| EPI_ISL_18672038 | NSP3 | hCoV-19/Henan/KFCDC044/2023 | L | 1416 | I | 11 | 20231118 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | L | 1416 | P | 1 | 20210812 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | L | 1416 | stop | 20 | 20230401 |
| EPI_ISL_1475636 | NSP3 | hCoV-19/England/OXON-F79F9D/2021 | L | 1416 | insQPLLstopVFstopC | 1 | 20210302 |
| EPI_ISL_19192500 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16022/2024 | L | 1416 | Y | 18 | 20240324 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | L | 1416 | insYstopVFAstopVLstopSTQP | 8 | 20230315 |
| EPI_ISL_16354122 | NSP3 | hCoV-19/Italy/LOM-ASST-69251961/2022 | L | 1416 | C | 65 | 20221227 |
| EPI_ISL_19701364 | NSP3 | hCoV-19/Spain/AS-HUCA-232508111/2025 | L | 1416 | J | 4 | 20250127 |
| EPI_ISL_12145034 | NSP3 | hCoV-19/Turkey/HSGM-G8419/2022 | L | 1416 | Q | 1 | 20220312 |
| EPI_ISL_19705649 | NSP3 | hCoV-19/USA/CO-CDPHE-42867799/2025 | L | 1416 | S | 139 | 20250122 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | L | 1416 | E | 1 | 20210817 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | L | 1416 | V | 20 | 20240307 |
| EPI_ISL_842177 | NSP3 | hCoV-19/England/QEUH-A8CA31/2020 | L | 1416 | insNstopstop | 1 | 20201016 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | L | 1416 | A | 1 | 20210815 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | L | 1416 | H | 2 | 20210801 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 1416 | del | 70 | 20241226 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | L | 1416 | D | 1 | 20210806 |
| EPI_ISL_10045285 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344723/2022 | L | 1416 | K | 2 | 20220207 |
| EPI_ISL_8194882 | NSP3 | hCoV-19/Egypt/NRC-6352/2020 | L | 1417 | H | 2 | 20200726 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | L | 1417 | S | 5 | 20230117 |
| EPI_ISL_14589161 | NSP3 | hCoV-19/Japan/RIMD12579/2022 | L | 1417 | R | 5 | 20220715 |
| EPI_ISL_2903001 | NSP3 | hCoV-19/England/OXON-F876C4/2020 | L | 1417 | insW | 1 | 20201012 |
| EPI_ISL_19534888 | NSP3 | hCoV-19/Japan/EIS10-943/2024 | L | 1417 | V | 189 | 20241011 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 1417 | del | 65 | 20241226 |
| EPI_ISL_19003361 | NSP3 | hCoV-19/Brazil/GO-FIOCRUZ-1484/2024 | L | 1417 | Q | 3 | 20240118 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1417 | D | 1 | 20201214 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | L | 1417 | N | 5 | 20240307 |
| EPI_ISL_19227797 | NSP3 | hCoV-19/Singapore/R36MQ83/2024 | L | 1417 | J | 27 | 20240603 |
| EPI_ISL_19817213 | NSP3 | hCoV-19/England/CLIMB-CM7YKKPI/2025 | L | 1417 | I | 132 | 20250319 |
| EPI_ISL_19651445 | NSP3 | hCoV-19/Brazil/RS-FIOCRUZ-12746/2024 | L | 1417 | P | 125 | 20241121 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | L | 1417 | C | 2 | 20220110 |
| EPI_ISL_16258494 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2033/2022 | L | 1417 | W | 2 | 20220812 |
| EPI_ISL_2903267 | NSP3 | hCoV-19/England/OXON-F895E3/2020 | L | 1417 | A | 5 | 20201002 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | L | 1417 | G | 2 | 20211228 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | L | 1417 | Y | 5 | 20220811 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1417 | F | 46 | 20230624 |
| EPI_ISL_12215607 | NSP3 | hCoV-19/France/IDF-AphpSA-ZJ000589/2022 | L | 1417 | M | 2 | 20220102 |
| EPI_ISL_8317487 | NSP3 | hCoV-19/Czech Republic/NRL_18091/2021 | L | 1417 | insRQQ | 6 | 20211125 |
| EPI_ISL_19750100 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00021915_01/2024 | L | 1417 | T | 109 | 20240827 |
| EPI_ISL_19143499 | NSP3 | hCoV-19/Pakistan/GRH42499/2024 | L | 1418 | stop | 14 | 20240307 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1418 | T | 4 | 20220210 |
| EPI_ISL_18397071 | NSP3 | hCoV-19/Croatia/45546/2023 | L | 1418 | F | 64 | 20230926 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | L | 1418 | Y | 21 | 20230401 |
| EPI_ISL_17466443 | NSP3 | hCoV-19/Chile/CO-26591/2023 | L | 1418 | C | 3 | 20230327 |
| EPI_ISL_19735401 | NSP3 | hCoV-19/Japan/TKYnat18340/2025 | L | 1418 | S | 466 | 20250201 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1418 | W | 1 | 20201214 |
| EPI_ISL_16394737 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2508/2022 | L | 1418 | E | 1 | 20221224 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | L | 1418 | N | 5 | 20221224 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | L | 1418 | P | 1 | 20210414 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 1418 | del | 66 | 20241226 |
| EPI_ISL_19242000 | NSP3 | hCoV-19/Yunnan/YNCDC-0602/2024 | L | 1418 | V | 103 | 20240325 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | L | 1418 | R | 1 | 20230117 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | L | 1418 | D | 14 | 20230401 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | L | 1418 | insFstop | 1 | 20210801 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | L | 1418 | A | 3 | 20220219 |
| EPI_ISL_15232090 | NSP3 | hCoV-19/Singapore/12047/2022 | L | 1418 | J | 5 | 20220917 |
| EPI_ISL_19750100 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00021915_01/2024 | L | 1418 | I | 176 | 20240827 |
| EPI_ISL_13964150 | NSP3 | hCoV-19/Japan/IC-12510/2022 | S | 1419 | C | 6 | 20220701 |
| EPI_ISL_17275320 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45845/2023 | S | 1419 | Q | 19 | 20230217 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | S | 1419 | N | 61 | 20230401 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | S | 1419 | del | 67 | 20241226 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | S | 1419 | stop | 74 | 20230315 |
| EPI_ISL_19288091 | NSP3 | hCoV-19/Wales/CLIMB-CM7YKO9I/2024 | S | 1419 | G | 103 | 20240710 |
| EPI_ISL_15329103 | NSP3 | hCoV-19/Netherlands/NB-MVD-CWGS2203617/2022 | S | 1419 | T | 24 | 20220926 |
| EPI_ISL_19750100 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00021915_01/2024 | S | 1419 | K | 110 | 20240827 |
| EPI_ISL_3178778 | NSP3 | hCoV-19/England/OXON-FA58F7/2021 | S | 1419 | E | 1 | 20210717 |
| EPI_ISL_7509786 | NSP3 | hCoV-19/USA/CA-CSMC680/2020 | S | 1419 | insSLIYSLstopVFstopCLIstop | 1 | 20200831 |
| EPI_ISL_19640974 | NSP3 | hCoV-19/USA/CA-PFZ02085/2024 | S | 1419 | R | 30 | 20240912 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | S | 1419 | M | 1 | 20200608 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | S | 1419 | F | 3 | 20221225 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | S | 1419 | Y | 17 | 20230401 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | S | 1419 | H | 1 | 20230117 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | S | 1419 | A | 22 | 20230624 |
| EPI_ISL_16954497 | NSP3 | hCoV-19/New Zealand/23XA0552/2023 | S | 1419 | L | 24 | 20230114 |
| EPI_ISL_16258498 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1984/2022 | S | 1419 | W | 1 | 20220730 |
| EPI_ISL_13633135 | NSP3 | hCoV-19/Sweden/03_SE600_500000063403SP/2022 | S | 1419 | P | 1 | 20220106 |
| EPI_ISL_19804765 | NSP3 | hCoV-19/USA/NY-NYULH-22462/2025 | S | 1419 | I | 774 | 20250317 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1419 | V | 6 | 20220210 |
| EPI_ISL_842121 | NSP3 | hCoV-19/England/QEUH-A6221B/2020 | V | 1420 | T | 1 | 20201012 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | V | 1420 | stop | 22 | 20230401 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | V | 1420 | del | 180 | 20241226 |
| EPI_ISL_16906764 | NSP3 | hCoV-19/USA/FL-CDC-QDX46136990/2023 | V | 1420 | G | 19 | 20230126 |
| EPI_ISL_10820011 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-79367/2022 | V | 1420 | insK | 9 | 20220112 |
| EPI_ISL_8146224 | NSP3 | hCoV-19/Sweden/UUH-500000055719SP/2021 | V | 1420 | insXX | 1 | 20211209 |
| EPI_ISL_1730594 | NSP3 | hCoV-19/England/OXON-F80C32/2021 | V | 1420 | insFstopCLIstopA | 2 | 20210410 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | V | 1420 | insFstop | 8 | 20230315 |
| EPI_ISL_5511691 | NSP3 | hCoV-19/USA/ID-IBL-758629/2021 | V | 1420 | Q | 1 | 20210916 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | V | 1420 | Y | 17 | 20230401 |
| EPI_ISL_840346 | NSP3 | hCoV-19/England/OXON-F4645E/2020 | V | 1420 | insLstopSTQPLLstopVFstopCLIstopA | 2 | 20201227 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1420 | K | 4 | 20220210 |
| EPI_ISL_1979075 | NSP3 | hCoV-19/England/OXON-F8168E/2021 | V | 1420 | insWVFstopCLIstopA | 1 | 20210421 |
| EPI_ISL_18809001 | NSP3 | hCoV-19/USA/NY-CDC-QDX90889404/2024 | V | 1420 | L | 32 | 20240102 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | V | 1420 | C | 1 | 20210817 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | V | 1420 | S | 4 | 20220811 |
| EPI_ISL_19826021 | NSP3 | hCoV-19/Singapore/Y25R15MSC82/2025 | V | 1420 | F | 202 | 20250408 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | V | 1420 | D | 3 | 20211009 |
| EPI_ISL_16808529 | NSP3 | hCoV-19/Japan/TKYmbc32440/2023 | V | 1420 | M | 5 | 20230106 |
| EPI_ISL_19804765 | NSP3 | hCoV-19/USA/NY-NYULH-22462/2025 | V | 1420 | I | 1282 | 20250317 |
| EPI_ISL_17427533 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2871/2023 | V | 1420 | R | 53 | 20230401 |
| EPI_ISL_19732700 | NSP3 | hCoV-19/Canada/ON-PHL-202503462/2025 | V | 1420 | A | 378 | 20250205 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | C | 1421 | V | 22 | 20230401 |
| EPI_ISL_19283707 | NSP3 | hCoV-19/Spain/GA-CHUAC-12668/2024 | C | 1421 | F | 459 | 20240714 |
| EPI_ISL_3178778 | NSP3 | hCoV-19/England/OXON-FA58F7/2021 | C | 1421 | Q | 2 | 20210717 |
| EPI_ISL_16258498 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1984/2022 | C | 1421 | I | 3 | 20220730 |
| EPI_ISL_17094004 | NSP3 | hCoV-19/Austria/AGES-1119258/2023 | C | 1421 | W | 6 | 20230221 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | C | 1421 | H | 1 | 20210817 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | C | 1421 | K | 3 | 20221224 |
| EPI_ISL_12934402 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-012422-1622/2022 | C | 1421 | stop | 12 | 20220124 |
| EPI_ISL_15078980 | NSP3 | hCoV-19/USA/MD-IGS-012220304128A/2022 | C | 1421 | R | 18 | 20220731 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | C | 1421 | M | 1 | 20211228 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | C | 1421 | L | 11 | 20221225 |
| EPI_ISL_19554378 | NSP3 | hCoV-19/USA/NM-NMDOH-033301/2024 | C | 1421 | S | 318 | 20241001 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1421 | P | 2 | 20210318 |
| EPI_ISL_19649588 | NSP3 | hCoV-19/Australia/QLD0x014FC0/2024 | C | 1421 | Y | 981 | 20241218 |
| EPI_ISL_17711372 | NSP3 | hCoV-19/Thailand/NIC_AYA_POS1698/2023 | C | 1421 | G | 91 | 20230501 |
| EPI_ISL_16258494 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2033/2022 | C | 1421 | N | 2 | 20220812 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | C | 1421 | A | 1 | 20211031 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | C | 1421 | del | 92 | 20241226 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | L | 1422 | insFTRST | 1 | 20210919 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | L | 1422 | T | 13 | 20221018 |
| EPI_ISL_19393136 | NSP3 | hCoV-19/Japan/FR012-0496/2024 | L | 1422 | P | 51 | 20240826 |
| EPI_ISL_16447644 | NSP3 | hCoV-19/Italy/LOM-ASST-69257702/2023 | L | 1422 | Q | 5 | 20230102 |
| EPI_ISL_16258492 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1983/2022 | L | 1422 | C | 1 | 20220726 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | L | 1422 | F | 29 | 20230401 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | L | 1422 | insXFF | 1 | 20211211 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | L | 1422 | stop | 5 | 20211228 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1422 | E | 1 | 20220210 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 1422 | del | 117 | 20241226 |
| EPI_ISL_19810582 | NSP3 | hCoV-19/USA/KY-KSPHL-0003776/2025 | L | 1422 | I | 582 | 20250202 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | L | 1422 | A | 1 | 20211031 |
| EPI_ISL_17463153 | NSP3 | hCoV-19/USA/NC-WM07615/2023 | L | 1422 | V | 11 | 20230218 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | L | 1422 | insRCFNVstopFRH | 1 | 20210905 |
| EPI_ISL_19280435 | NSP3 | hCoV-19/Italy/LOM-UNIBS-07169704/2024 | L | 1422 | M | 2 | 20240715 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | L | 1422 | Y | 3 | 20211009 |
| EPI_ISL_19770381 | NSP3 | hCoV-19/Spain/AS-HUCA-232514718/2025 | L | 1422 | J | 21 | 20250219 |
| EPI_ISL_12955778 | NSP3 | hCoV-19/Russia/PER-CRIE-7733743272/2022 | L | 1422 | R | 3 | 20220226 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | L | 1422 | S | 7 | 20221224 |
| EPI_ISL_19772270 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10614/2025 | G | 1423 | S | 767 | 20250220 |
| EPI_ISL_18412993 | NSP3 | hCoV-19/France/HDF-IPP23344/2023 | G | 1423 | R | 11 | 20231002 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | G | 1423 | insKFFNVHLAC | 1 | 20210802 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | G | 1423 | stop | 2 | 20220120 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | G | 1423 | P | 7 | 20240706 |
| EPI_ISL_842121 | NSP3 | hCoV-19/England/QEUH-A6221B/2020 | G | 1423 | M | 1 | 20201012 |
| EPI_ISL_14751814 | NSP3 | hCoV-19/Poland/EP98087/2022 | G | 1423 | T | 2 | 20220831 |
| EPI_ISL_16354122 | NSP3 | hCoV-19/Italy/LOM-ASST-69251961/2022 | G | 1423 | E | 2 | 20221227 |
| EPI_ISL_16637620 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-43578/2022 | G | 1423 | D | 8 | 20221220 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | G | 1423 | L | 69 | 20220910 |
| EPI_ISL_17372574 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2633/2022 | G | 1423 | F | 8 | 20221224 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | G | 1423 | A | 24 | 20230401 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | G | 1423 | I | 46 | 20230217 |
| EPI_ISL_19803650 | NSP3 | hCoV-19/USA/WI-WSLH-2500859/2025 | G | 1423 | C | 601 | 20250219 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | G | 1423 | H | 1 | 20210805 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | G | 1423 | Y | 7 | 20211009 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | G | 1423 | insCF | 3 | 20230106 |
| EPI_ISL_1077253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-22725/2020 | G | 1423 | W | 1 | 20201230 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | G | 1423 | N | 9 | 20230117 |
| EPI_ISL_19768641 | NSP3 | hCoV-19/Taiwan/CDC-W41951/2025 | G | 1423 | V | 381 | 20250304 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | G | 1423 | del | 140 | 20241226 |
| EPI_ISL_19833049 | NSP3 | hCoV-19/France/ARA-HCL025056183701/2025 | S | 1424 | F | 17719 | 20250404 |
| EPI_ISL_19679602 | NSP3 | hCoV-19/Canada/BC-BCCDC-762822/2024 | S | 1424 | C | 197 | 20241227 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | S | 1424 | R | 7 | 20240706 |
| EPI_ISL_16258494 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2033/2022 | S | 1424 | V | 5 | 20220812 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | S | 1424 | L | 5 | 20220210 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | S | 1424 | del | 92 | 20241226 |
| EPI_ISL_3003679 | NSP3 | hCoV-19/Scotland/OXON-FA07D1/2021 | S | 1424 | H | 3 | 20210701 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | S | 1424 | W | 1 | 20220110 |
| EPI_ISL_19280435 | NSP3 | hCoV-19/Italy/LOM-UNIBS-07169704/2024 | S | 1424 | T | 116 | 20240715 |
| EPI_ISL_3178778 | NSP3 | hCoV-19/England/OXON-FA58F7/2021 | S | 1424 | E | 1 | 20210717 |
| EPI_ISL_19621546 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000636201/2024 | S | 1424 | Y | 98 | 20241126 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | S | 1424 | N | 27 | 20230401 |
| EPI_ISL_18489232 | NSP3 | hCoV-19/Italy/LOM-69506766/2023 | S | 1424 | G | 9 | 20231026 |
| EPI_ISL_19745804 | NSP3 | hCoV-19/USA/NY-SUNYQB-XL3084/2025 | S | 1424 | A | 86 | 20250205 |
| EPI_ISL_19818617 | NSP3 | hCoV-19/USA/DE-DHSS-1284/2025 | S | 1424 | P | 220 | 20250311 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | S | 1424 | stop | 21 | 20230401 |
| EPI_ISL_18821641 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20022/2023 | S | 1424 | I | 3 | 20231218 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | L | 1425 | R | 3 | 20230117 |
| EPI_ISL_9973798 | NSP3 | hCoV-19/France/GES-HMN-22012270112/2022 | L | 1425 | C | 1 | 20220124 |
| EPI_ISL_18489232 | NSP3 | hCoV-19/Italy/LOM-69506766/2023 | L | 1425 | stop | 7 | 20231026 |
| EPI_ISL_18531518 | NSP3 | hCoV-19/Italy/LOM-69518140/2023 | L | 1425 | J | 2 | 20231113 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | L | 1425 | insFN | 1 | 20200730 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1425 | A | 2 | 20220210 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 1425 | del | 89 | 20241226 |
| EPI_ISL_16583696 | NSP3 | hCoV-19/Lebanon/GS-244/2022 | L | 1425 | insDN | 1 | 20220204 |
| EPI_ISL_3178778 | NSP3 | hCoV-19/England/OXON-FA58F7/2021 | L | 1425 | insKH | 1 | 20210717 |
| EPI_ISL_1249105 | NSP3 | hCoV-19/England/OXON-F6D187/2021 | L | 1425 | Y | 1 | 20210210 |
| EPI_ISL_12955759 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748473/2022 | L | 1425 | G | 1 | 20220227 |
| EPI_ISL_19392174 | NSP3 | hCoV-19/USA/CA-SEARCH-140949/2024 | L | 1425 | V | 106 | 20240713 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | L | 1425 | F | 45 | 20240706 |
| EPI_ISL_19705504 | NSP3 | hCoV-19/USA/MS-MSPHL-0011/2025 | L | 1425 | S | 356 | 20250115 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | L | 1425 | K | 1 | 20220210 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | L | 1425 | W | 1 | 20220116 |
| EPI_ISL_18686298 | NSP3 | hCoV-19/Xinjiang/XJCDCBAZ-369/2023 | L | 1425 | I | 38 | 20231026 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | L | 1425 | M | 4 | 20220227 |
| EPI_ISL_999011 | NSP3 | hCoV-19/England/OXON-F53A3E/2021 | L | 1425 | Q | 1 | 20210104 |
| EPI_ISL_19733793 | NSP3 | hCoV-19/USA/HI-H2531439/2025 | I | 1426 | N | 13 | 20250129 |
| EPI_ISL_2223669 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-40486/2020 | I | 1426 | J | 1 | 20200801 |
| EPI_ISL_10820011 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-79367/2022 | I | 1426 | insN | 3 | 20220112 |
| EPI_ISL_19428738 | NSP3 | hCoV-19/USA/IL-RIPHL_22040_G/2024 | I | 1426 | S | 450 | 20240810 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | I | 1426 | D | 1 | 20210622 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | I | 1426 | A | 1 | 20211228 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | I | 1426 | P | 6 | 20220227 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | I | 1426 | F | 34 | 20240706 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | I | 1426 | del | 89 | 20241226 |
| EPI_ISL_19752288 | NSP3 | hCoV-19/Ireland/D-SVUH-FBB20700-009/2025 | I | 1426 | V | 232 | 20250128 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | I | 1426 | Q | 1 | 20201214 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | I | 1426 | stop | 5 | 20230106 |
| EPI_ISL_19761848 | NSP3 | hCoV-19/Australia/QLD0x0152AD/2025 | I | 1426 | T | 1586 | 20250215 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | I | 1426 | Y | 5 | 20211228 |
| EPI_ISL_19203272 | NSP3 | hCoV-19/Australia/NSW-ICPMR-54095/2024 | I | 1426 | M | 14 | 20240528 |
| EPI_ISL_19588662 | NSP3 | hCoV-19/Brazil/MG-FIOCRUZ-12343/2024 | I | 1426 | L | 198 | 20241030 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | Y | 1427 | insAPstop | 1 | 20210805 |
| EPI_ISL_842121 | NSP3 | hCoV-19/England/QEUH-A6221B/2020 | Y | 1427 | Q | 1 | 20201012 |
| EPI_ISL_18098907 | NSP3 | hCoV-19/USA/TX-HMH-M-130489/2023 | Y | 1427 | F | 45 | 20230725 |
| EPI_ISL_19437543 | NSP3 | hCoV-19/Japan/FR062-0495/2024 | Y | 1427 | C | 65 | 20240913 |
| EPI_ISL_11355295 | NSP3 | hCoV-19/France/GES-ChNa-210063151501/2021 | Y | 1427 | insCYNCVLLLEV | 1 | 20210803 |
| EPI_ISL_5013302 | NSP3 | hCoV-19/Spain/PV-HUD- 65130615/2021 | Y | 1427 | insSN | 1 | 20210907 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | Y | 1427 | stop | 25 | 20230401 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | Y | 1427 | V | 70 | 20220910 |
| EPI_ISL_18982146 | NSP3 | hCoV-19/USA/IL-RIPHL_122761_G/2024 | Y | 1427 | I | 12 | 20240215 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | Y | 1427 | P | 1 | 20211211 |
| EPI_ISL_2903057 | NSP3 | hCoV-19/England/OXON-F87E80/2021 | Y | 1427 | W | 1 | 20210615 |
| EPI_ISL_11355266 | NSP3 | hCoV-19/France/GES-ChNa-210065839301/2021 | Y | 1427 | T | 1 | 20210813 |
| EPI_ISL_455323 | NSP3 | hCoV-19/Spain/AN-ISCIII-201636/2020 | Y | 1427 | D | 1 | 20200306 |
| EPI_ISL_19280435 | NSP3 | hCoV-19/Italy/LOM-UNIBS-07169704/2024 | Y | 1427 | N | 12 | 20240715 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | Y | 1427 | insW | 1 | 20210802 |
| EPI_ISL_10924594 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11813/2022 | Y | 1427 | R | 14 | 20220228 |
| EPI_ISL_19806200 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YR6JS/2025 | Y | 1427 | H | 1056 | 20250309 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1427 | E | 1 | 20210318 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1427 | K | 2 | 20220210 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | Y | 1427 | A | 1 | 20211228 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | Y | 1427 | L | 11 | 20220811 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | Y | 1427 | del | 82 | 20241226 |
| EPI_ISL_17294398 | NSP3 | hCoV-19/South Korea/KDCA221668/2023 | Y | 1427 | S | 7 | 20230303 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | S | 1428 | del | 82 | 20241226 |
| EPI_ISL_16258472 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1977/2022 | S | 1428 | Q | 4 | 20220812 |
| EPI_ISL_19003694 | NSP3 | hCoV-19/USA/OH-ODH-SC4030974/2024 | S | 1428 | F | 8 | 20240304 |
| EPI_ISL_18900463 | NSP3 | hCoV-19/Japan/PG-592984/2024 | S | 1428 | Y | 4 | 20240119 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | S | 1428 | W | 1 | 20210817 |
| EPI_ISL_19791181 | NSP3 | hCoV-19/Brazil/MS-FIOCRUZ-FMS784/2025 | S | 1428 | L | 3843 | 20250228 |
| EPI_ISL_1051720 | NSP3 | hCoV-19/England/OXON-F6334F/2021 | S | 1428 | E | 1 | 20210128 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | S | 1428 | R | 4 | 20230106 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | S | 1428 | stop | 17 | 20230315 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | S | 1428 | C | 27 | 20230217 |
| EPI_ISL_19408675 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA11876-P0/2024 | S | 1428 | A | 153 | 20240825 |
| EPI_ISL_19332449 | NSP3 | hCoV-19/USA/CA-CDPH-6000020249/2024 | S | 1428 | T | 309 | 20240721 |
| EPI_ISL_19707197 | NSP3 | hCoV-19/Canada/ON-KHS-00264-v1/2025 | S | 1428 | P | 230 | 20250113 |
| EPI_ISL_17181483 | NSP3 | hCoV-19/USA/TX-HMH-M-126032/2023 | S | 1428 | N | 5 | 20230220 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | S | 1428 | insY | 1 | 20210401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1428 | K | 2 | 20220210 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | T | 1429 | Y | 24 | 20230217 |
| EPI_ISL_16985075 | NSP3 | hCoV-19/Germany/NI-IOV-60584473/2023 | T | 1429 | K | 2 | 20230116 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | T | 1429 | R | 1 | 20200730 |
| EPI_ISL_12839395 | NSP3 | hCoV-19/Thailand/DMSc-10093/2022 | T | 1429 | M | 33 | 20220505 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | T | 1429 | G | 1 | 20211031 |
| EPI_ISL_3046639 | NSP3 | hCoV-19/USA/RI-RKL_006_RISEQ-55_KD0049/2021 | T | 1429 | C | 1 | 20210207 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | T | 1429 | insN | 1 | 20211011 |
| EPI_ISL_19788327 | NSP3 | hCoV-19/USA/AZ-ASPHL-0170/2025 | T | 1429 | I | 3160 | 20250313 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | T | 1429 | V | 9 | 20220219 |
| EPI_ISL_19721887 | NSP3 | hCoV-19/USA/WI-WSLH-2500320/2025 | T | 1429 | N | 701 | 20250110 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | T | 1429 | Q | 2 | 20220104 |
| EPI_ISL_16354122 | NSP3 | hCoV-19/Italy/LOM-ASST-69251961/2022 | T | 1429 | P | 73 | 20221227 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 1429 | L | 4 | 20210801 |
| EPI_ISL_16726458 | NSP3 | hCoV-19/Peru/LOR-INS-38436/2022 | T | 1429 | F | 10 | 20221227 |
| EPI_ISL_19821824 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136134/2025 | T | 1429 | A | 175 | 20250325 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | T | 1429 | H | 4 | 20230106 |
| EPI_ISL_8803987 | NSP3 | hCoV-19/India/MH-NCCS-2750000371177/2021 | T | 1429 | insQ | 1 | 20210719 |
| EPI_ISL_18856332 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200676407N2/2024 | T | 1429 | S | 12 | 20240117 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | T | 1429 | E | 71 | 20220910 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | T | 1429 | del | 88 | 20241226 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | A | 1430 | N | 25 | 20230217 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | A | 1430 | E | 2 | 20210905 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | A | 1430 | K | 92 | 20230401 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | A | 1430 | del | 96 | 20241226 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | A | 1430 | L | 4 | 20220110 |
| EPI_ISL_1475687 | NSP3 | hCoV-19/England/OXON-F7CA6C/2021 | A | 1430 | insEK | 2 | 20210310 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | A | 1430 | Y | 3 | 20211228 |
| EPI_ISL_19753442 | NSP3 | hCoV-19/New Zealand/25YA0521/2025 | A | 1430 | V | 498 | 20250210 |
| EPI_ISL_19700483 | NSP3 | hCoV-19/Israel/ICH-741227273/2025 | A | 1430 | S | 588 | 20250116 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | A | 1430 | H | 1 | 20220210 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | A | 1430 | Q | 19 | 20230401 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | A | 1430 | W | 1 | 20220811 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | A | 1430 | I | 1 | 20221225 |
| EPI_ISL_19768779 | NSP3 | hCoV-19/USA/PA-CDC-QDX31855755/2025 | A | 1430 | T | 648 | 20250213 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | A | 1430 | F | 4 | 20211228 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | A | 1430 | C | 14 | 20230315 |
| EPI_ISL_4978380 | NSP3 | hCoV-19/USA/ID-IBL-756754/2021 | A | 1430 | insK | 1 | 20210905 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | A | 1430 | R | 9 | 20230217 |
| EPI_ISL_17081528 | NSP3 | hCoV-19/Bahrain/CDL-23210002122/2023 | A | 1430 | G | 5 | 20230120 |
| EPI_ISL_15656095 | NSP3 | hCoV-19/Georgia/Tb-s6381/2022 | A | 1430 | P | 5 | 20221023 |
| EPI_ISL_10308766 | NSP3 | hCoV-19/USA/TN-ASC-210643336/2022 | A | 1430 | insTID | 1 | 20220121 |
| EPI_ISL_19789334 | NSP3 | hCoV-19/Greece/PHLnetwork_6468/2024 | A | 1430 | D | 33 | 20241220 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | A | 1430 | M | 1 | 20210919 |
| EPI_ISL_17670198 | NSP3 | hCoV-19/Singapore/R31MR106/2023 | A | 1431 | G | 11 | 20230510 |
| EPI_ISL_19768126 | NSP3 | hCoV-19/USA/CA-GBW-GKPLAAAA43433/2025 | A | 1431 | T | 447 | 20250228 |
| EPI_ISL_18856332 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200676407N2/2024 | A | 1431 | insA | 1 | 20240117 |
| EPI_ISL_11355295 | NSP3 | hCoV-19/France/GES-ChNa-210063151501/2021 | A | 1431 | E | 3 | 20210803 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | A | 1431 | R | 3 | 20211031 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | A | 1431 | P | 41 | 20230624 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | A | 1431 | H | 2 | 20220116 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | A | 1431 | insLVFstopCLIstopACL | 1 | 20210114 |
| EPI_ISL_8146157 | NSP3 | hCoV-19/Sweden/UUH-500000069993SP/2021 | A | 1431 | insstopVXXXXXXXX | 1 | 20211209 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | A | 1431 | C | 53 | 20230401 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | A | 1431 | F | 8 | 20230106 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | A | 1431 | N | 2 | 20210805 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | A | 1431 | I | 6 | 20220811 |
| EPI_ISL_19148696 | NSP3 | hCoV-19/USA/MN-MDH-41620/2024 | A | 1431 | S | 213 | 20240505 |
| EPI_ISL_19821809 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136299/2025 | A | 1431 | V | 10085 | 20250325 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | A | 1431 | L | 22 | 20230315 |
| EPI_ISL_18431880 | NSP3 | hCoV-19/Canada/BC-BCCDC-657905/2023 | A | 1431 | D | 75 | 20231003 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | A | 1431 | del | 94 | 20241226 |
| EPI_ISL_8355332 | NSP3 | hCoV-19/France/IDF-HMN-21122200437/2021 | L | 1432 | T | 3 | 20211213 |
| EPI_ISL_18708559 | NSP3 | hCoV-19/Canada/ON-KHS-09819-v1/2023 | L | 1432 | F | 285 | 20231218 |
| EPI_ISL_577666 | NSP3 | hCoV-19/India/MH-NIV-206415/2020 | L | 1432 | R | 1 | 20200910 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1432 | P | 1 | 20201214 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | L | 1432 | insLstopVFstopCLIstop | 11 | 20230401 |
| EPI_ISL_18062837 | NSP3 | hCoV-19/Uganda/UVRI_461870/2023 | L | 1432 | stop | 43 | 20230619 |
| EPI_ISL_18401757 | NSP3 | hCoV-19/Hubei/HCDC-JZ3225/2023 | L | 1432 | K | 3 | 20231009 |
| EPI_ISL_10082630 | NSP3 | hCoV-19/USA/ID-IBL-789866/2022 | L | 1432 | insLW | 1 | 20220127 |
| EPI_ISL_1077253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-22725/2020 | L | 1432 | G | 1 | 20201230 |
| EPI_ISL_19273524 | NSP3 | hCoV-19/USA/WA-GBW-GKPLAAAA31468/2024 | L | 1432 | S | 108 | 20240703 |
| EPI_ISL_15031210 | NSP3 | hCoV-19/Singapore/11880/2022 | L | 1432 | J | 2 | 20220912 |
| EPI_ISL_18912847 | NSP3 | hCoV-19/USA/CA-SEARCH-139531/2023 | L | 1432 | I | 101 | 20231208 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 1432 | del | 97 | 20241226 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | L | 1432 | Q | 1 | 20230217 |
| EPI_ISL_9549224 | NSP3 | hCoV-19/USA/NY-NYCPHL-010257/2022 | L | 1432 | C | 3 | 20220124 |
| EPI_ISL_19354818 | NSP3 | hCoV-19/USA/NJ-PHEL-V24008299/2024 | L | 1432 | V | 86 | 20240720 |
| EPI_ISL_1387222 | NSP3 | hCoV-19/England/OXON-F6C470/2021 | L | 1432 | insP | 1 | 20210126 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | G | 1433 | T | 13 | 20230315 |
| EPI_ISL_19491346 | NSP3 | hCoV-19/Spain/CL-COV49321/2024 | G | 1433 | L | 34 | 20240926 |
| EPI_ISL_5333157 | NSP3 | hCoV-19/Russia/ORE-RII-MH36158S/2021 | G | 1433 | M | 1 | 20211011 |
| EPI_ISL_18995034 | NSP3 | hCoV-19/Japan/PG-599415/2024 | G | 1433 | D | 227 | 20240210 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | G | 1433 | Y | 3 | 20230217 |
| EPI_ISL_19776542 | NSP3 | hCoV-19/Denmark/DCGC-691912/2025 | G | 1433 | C | 618 | 20250127 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | G | 1433 | P | 20 | 20230401 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | G | 1433 | del | 103 | 20241226 |
| EPI_ISL_13307934 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2190/2022 | G | 1433 | N | 9 | 20220527 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1433 | Q | 1 | 20220210 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | G | 1433 | stop | 83 | 20230116 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 1433 | R | 11 | 20230101 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | G | 1433 | A | 18 | 20230401 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | G | 1433 | I | 2 | 20220811 |
| EPI_ISL_19794258 | NSP3 | hCoV-19/Singapore/Y25R12MSC66/2025 | G | 1433 | S | 386 | 20250313 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | G | 1433 | H | 20 | 20230624 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | G | 1433 | insFstopCLIstopACLLT | 2 | 20211103 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | G | 1433 | K | 2 | 20211011 |
| EPI_ISL_19595368 | NSP3 | hCoV-19/Yunnan/YNCDC-1224/2024 | G | 1433 | V | 133 | 20240530 |
| EPI_ISL_13967250 | NSP3 | hCoV-19/Finland/THL-202214924/2022 | V | 1434 | D | 4 | 20220617 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | V | 1434 | K | 1 | 20221225 |
| EPI_ISL_8718063 | NSP3 | hCoV-19/USA/ID-IBL-781558/2022 | V | 1434 | insW | 1 | 20220103 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | V | 1434 | N | 4 | 20220811 |
| EPI_ISL_11355408 | NSP3 | hCoV-19/France/GES-ChNa-210059743501/2021 | V | 1434 | insXMLIstopACLLTVLVTEKAIstopT | 1 | 20210716 |
| EPI_ISL_15387278 | NSP3 | hCoV-19/Morocco/FMP404/2021 | V | 1434 | insFTEKAIstopT | 1 | 20211227 |
| EPI_ISL_19788234 | NSP3 | hCoV-19/Brazil/SP-FIOCRUZ-341/2025 | V | 1434 | G | 678 | 20250128 |
| EPI_ISL_19507700 | NSP3 | hCoV-19/Italy/LOM-UNIBS-09264259/2024 | V | 1434 | A | 121 | 20240926 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | V | 1434 | T | 76 | 20220910 |
| EPI_ISL_19082488 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140304/2024 | V | 1434 | F | 486 | 20240305 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | V | 1434 | insFstopCLIstopVR | 1 | 20210801 |
| EPI_ISL_11355295 | NSP3 | hCoV-19/France/GES-ChNa-210063151501/2021 | V | 1434 | H | 1 | 20210803 |
| EPI_ISL_10924577 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11776/2022 | V | 1434 | Q | 6 | 20220227 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | V | 1434 | C | 16 | 20230401 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | V | 1434 | R | 22 | 20230401 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | V | 1434 | Y | 3 | 20230106 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | V | 1434 | stop | 7 | 20210801 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | V | 1434 | J | 1 | 20210401 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | V | 1434 | del | 115 | 20241226 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | V | 1434 | insstop | 1 | 20200721 |
| EPI_ISL_19819580 | NSP3 | hCoV-19/Australia/SA2505845/2025 | V | 1434 | I | 431 | 20250325 |
| EPI_ISL_18564567 | NSP3 | hCoV-19/South Korea/KDCA274018/2023 | V | 1434 | L | 43 | 20231030 |
| EPI_ISL_13307934 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2190/2022 | L | 1435 | Q | 2 | 20220527 |
| EPI_ISL_19721829 | NSP3 | hCoV-19/USA/WI-WSLH-2500257/2025 | L | 1435 | S | 165 | 20250107 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | L | 1435 | insFstop | 1 | 20200729 |
| EPI_ISL_19092184 | NSP3 | hCoV-19/USA/UT-UPHL-240124448454/2024 | L | 1435 | V | 33 | 20240109 |
| EPI_ISL_19631492 | NSP3 | hCoV-19/Italy/SIC-AOUP-UNIPA_109422/2024 | L | 1435 | F | 204 | 20241108 |
| EPI_ISL_19507700 | NSP3 | hCoV-19/Italy/LOM-UNIBS-09264259/2024 | L | 1435 | I | 36 | 20240926 |
| EPI_ISL_16807781 | NSP3 | hCoV-19/Singapore/R9MR65/2023 | L | 1435 | J | 21 | 20230129 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 1435 | del | 147 | 20240904 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1435 | D | 1 | 20201214 |
| EPI_ISL_5990601 | NSP3 | hCoV-19/USA/WA-PHL-005218/2021 | L | 1435 | Y | 2 | 20211014 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | L | 1435 | insstopC | 1 | 20220104 |
| EPI_ISL_1730534 | NSP3 | hCoV-19/Northern Ireland/OXON-F7F79F/2021 | L | 1435 | E | 1 | 20210401 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1435 | M | 20 | 20230624 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | L | 1435 | R | 2 | 20230217 |
| EPI_ISL_1909923 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH019/2021 | L | 1435 | T | 1 | 20210314 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | L | 1435 | W | 2 | 20230106 |
| EPI_ISL_12955340 | NSP3 | hCoV-19/Russia/MAG-CRIE-7730613297/2022 | L | 1435 | stop | 7 | 20220212 |
| EPI_ISL_11415692 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC58LAMS/2022 | L | 1435 | C | 7 | 20220131 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | L | 1435 | A | 2 | 20210919 |
| EPI_ISL_12371287 | NSP3 | hCoV-19/Pakistan/AKU-MARCH-R2-MIN-19/2021 | L | 1435 | K | 3 | 20211229 |
| EPI_ISL_17028516 | NSP3 | hCoV-19/Chile/AR-ISPC-96965/2021 | L | 1435 | insEVQILELKHLCR | 1 | 20210511 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | L | 1435 | insE | 9 | 20230217 |
| EPI_ISL_17606677 | NSP3 | hCoV-19/Australia/SA535315/2023 | M | 1436 | R | 15 | 20230423 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | M | 1436 | Y | 3 | 20221225 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | M | 1436 | H | 1 | 20210428 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | M | 1436 | E | 13 | 20230217 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | M | 1436 | L | 227 | 20241226 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | M | 1436 | S | 23 | 20230624 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | M | 1436 | stop | 1 | 20210212 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | M | 1436 | F | 25 | 20230401 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | M | 1436 | Q | 38 | 20230217 |
| EPI_ISL_5054148 | NSP3 | hCoV-19/Senegal/cTE BM 0259/2020 | M | 1436 | insstopC | 1 | 20200626 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | M | 1436 | C | 3 | 20211228 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | M | 1436 | del | 153 | 20240904 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | M | 1436 | D | 3 | 20220219 |
| EPI_ISL_19470096 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17286065/2024 | M | 1436 | K | 24 | 20240917 |
| EPI_ISL_19809902 | NSP3 | hCoV-19/USA/NY-PRL-250325_81A04/2025 | M | 1436 | V | 578 | 20250314 |
| EPI_ISL_19831309 | NSP3 | hCoV-19/Hong Kong/VB25111042/2025 | M | 1436 | I | 1511 | 20250331 |
| EPI_ISL_19655294 | NSP3 | hCoV-19/Japan/FR062-0543/2024 | M | 1436 | T | 544 | 20241225 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | M | 1436 | N | 5 | 20220210 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | S | 1437 | K | 23 | 20230624 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | S | 1437 | M | 39 | 20220910 |
| EPI_ISL_19092912 | NSP3 | hCoV-19/South Korea/KDCA292128/2024 | S | 1437 | Y | 421 | 20240409 |
| EPI_ISL_15320932 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N13/2022 | S | 1437 | I | 2 | 20220812 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1437 | insL | 1 | 20230101 |
| EPI_ISL_10891816 | NSP3 | hCoV-19/Indonesia/BT-NIHRD-MI_22_01053/2022 | S | 1437 | stop | 5 | 20220105 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | S | 1437 | V | 16 | 20230217 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | S | 1437 | R | 6 | 20230217 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | S | 1437 | N | 22 | 20230401 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | S | 1437 | del | 156 | 20240904 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | S | 1437 | Q | 18 | 20230217 |
| EPI_ISL_19499596 | NSP3 | hCoV-19/USA/TX-HMH-M-146215/2024 | S | 1437 | A | 122 | 20240912 |
| EPI_ISL_19229980 | NSP3 | hCoV-19/Sichuan/CDCDC-19-CX1103/2024 | S | 1437 | T | 31 | 20240519 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1437 | D | 3 | 20220210 |
| EPI_ISL_19821781 | NSP3 | hCoV-19/USA/MD-CDC-LC1136235/2025 | S | 1437 | F | 7231 | 20250324 |
| EPI_ISL_19466374 | NSP3 | hCoV-19/USA/NY-PRL-241001_84D11/2024 | S | 1437 | P | 93 | 20240917 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | S | 1437 | L | 11 | 20240706 |
| EPI_ISL_16997863 | NSP3 | hCoV-19/Italy/MAR_UNIVPM_Marche_45639_WG/2023 | S | 1437 | C | 44 | 20230110 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | N | 1438 | E | 6 | 20230217 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | N | 1438 | R | 6 | 20230106 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | N | 1438 | V | 11 | 20241226 |
| EPI_ISL_19007999 | NSP3 | hCoV-19/Italy/LOM-UniMI203/2022 | N | 1438 | stop | 5 | 20220118 |
| EPI_ISL_18945087 | NSP3 | hCoV-19/France/IDF-IPP03279/2024 | N | 1438 | I | 40 | 20240212 |
| EPI_ISL_6164941 | NSP3 | hCoV-19/USA/OK-CDC-ASC210344781/2021 | N | 1438 | C | 7 | 20211010 |
| EPI_ISL_18787735 | NSP3 | hCoV-19/Canada/AB-ABPHL-112713/2024 | N | 1438 | T | 51 | 20240107 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | N | 1438 | G | 3 | 20210621 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | N | 1438 | Q | 12 | 20230217 |
| EPI_ISL_19784508 | NSP3 | hCoV-19/Australia/QLD0x01537B/2025 | N | 1438 | D | 237 | 20250224 |
| EPI_ISL_19737419 | NSP3 | hCoV-19/USA/MN-MDH-46135/2025 | N | 1438 | S | 388 | 20250202 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | N | 1438 | W | 1 | 20210817 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | N | 1438 | P | 1 | 20211031 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | N | 1438 | H | 87 | 20230624 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | N | 1438 | L | 23 | 20230401 |
| EPI_ISL_8147162 | NSP3 | hCoV-19/Sweden/UUH-500000074495SP/2021 | N | 1438 | insXX | 1 | 20211216 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | N | 1438 | Z | 1 | 20230217 |
| EPI_ISL_17393627 | NSP3 | hCoV-19/USA/FL-CDC-LC1032231/2023 | N | 1438 | B | 9 | 20230322 |
| EPI_ISL_7677297 | NSP3 | hCoV-19/Russia/KDA-RII-MH37765S/2021 | N | 1438 | F | 3 | 20211031 |
| EPI_ISL_13112750 | NSP3 | hCoV-19/Turkey/HSGM-IST-00126/2022 | N | 1438 | Y | 10 | 20220424 |
| EPI_ISL_19753366 | NSP3 | hCoV-19/South Korea/KDCA296968/2025 | N | 1438 | K | 123 | 20250203 |
| EPI_ISL_15320932 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N13/2022 | N | 1438 | A | 4 | 20220812 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | N | 1438 | del | 209 | 20240904 |
| EPI_ISL_15688612 | NSP3 | hCoV-19/Chile/AT-121802/2022 | L | 1439 | insLELKHLCRLLstopQ | 1 | 20221020 |
| EPI_ISL_12215607 | NSP3 | hCoV-19/France/IDF-AphpSA-ZJ000589/2022 | L | 1439 | A | 4 | 20220102 |
| EPI_ISL_17496037 | NSP3 | hCoV-19/Singapore/R23MR275/2023 | L | 1439 | J | 2 | 20230403 |
| EPI_ISL_4006747 | NSP3 | hCoV-19/Sweden/UUH-000200103218/2021 | L | 1439 | insXXX | 1 | 20210722 |
| EPI_ISL_13392927 | NSP3 | hCoV-19/Thailand/NIC_SPK_20042/2022 | L | 1439 | E | 2 | 20220603 |
| EPI_ISL_17028507 | NSP3 | hCoV-19/Chile/AT-ISPC-96312/2021 | L | 1439 | insLELKHLCRLLstopXXX | 1 | 20210516 |
| EPI_ISL_19787809 | NSP3 | hCoV-19/USA/CA-CDC-2-8272302/2025 | L | 1439 | S | 198 | 20250102 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | L | 1439 | H | 1 | 20220104 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | L | 1439 | M | 1 | 20230217 |
| EPI_ISL_19785104 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13833/2024 | L | 1439 | V | 237 | 20241205 |
| EPI_ISL_19810315 | NSP3 | hCoV-19/Japan/FR029-0017/2025 | L | 1439 | insGTWC | 1 | 20250301 |
| EPI_ISL_17028503 | NSP3 | hCoV-19/Chile/AT-ISPC-96299/2021 | L | 1439 | insLELKHLCRLXXXXX | 1 | 20210516 |
| EPI_ISL_8524379 | NSP3 | hCoV-19/Turkey/HSGM-F13714/2021 | L | 1439 | insG | 1 | 20211230 |
| EPI_ISL_2348980 | NSP3 | hCoV-19/Greece/119922/2021 | L | 1439 | insLELKHLXX | 1 | 20210213 |
| EPI_ISL_15320932 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N13/2022 | L | 1439 | Y | 3 | 20220812 |
| EPI_ISL_4617962 | NSP3 | hCoV-19/Germany/BY-RKI-I-261456/2021 | L | 1439 | C | 3 | 20210921 |
| EPI_ISL_19414504 | NSP3 | hCoV-19/Israel/SMC-7118357/2024 | L | 1439 | F | 105 | 20240831 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | L | 1439 | del | 170 | 20240904 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | L | 1439 | R | 6 | 20240706 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 1439 | insLELLIstop | 1 | 20230104 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | L | 1439 | T | 20 | 20230624 |
| EPI_ISL_9519796 | NSP3 | hCoV-19/France/GES-HMN-22012190658/2022 | L | 1439 | K | 7 | 20220110 |
| EPI_ISL_19637531 | NSP3 | hCoV-19/Russia/ULY-RII-MH213383S/2024 | L | 1439 | I | 143 | 20241112 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | L | 1439 | insstopFS | 1 | 20210805 |
| EPI_ISL_14038196 | NSP3 | hCoV-19/Chile/BI-86921/2022 | L | 1439 | insLELKHLCRLLstopQXX | 1 | 20220712 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | L | 1439 | insK | 1 | 20210919 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | L | 1439 | D | 2 | 20220219 |
| EPI_ISL_19700699 | NSP3 | hCoV-19/Japan/FR019-0042/2024 | L | 1439 | stop | 40 | 20241226 |
| EPI_ISL_3556836 | NSP3 | hCoV-19/USA/ID-IBL-632543/2020 | L | 1439 | G | 1 | 20200717 |
| EPI_ISL_12754235 | NSP3 | hCoV-19/USA/MS-MSPHL-94/2021 | L | 1439 | insLELKHLCRLLstop | 2 | 20210714 |
| EPI_ISL_18828033 | NSP3 | hCoV-19/USA/PA-CDC-LC1087415/2024 | G | 1440 | A | 22 | 20240111 |
| EPI_ISL_14152353 | NSP3 | hCoV-19/USA/OR-OSPHL06449/2022 | G | 1440 | insRH | 1 | 20220709 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | G | 1440 | T | 7 | 20220219 |
| EPI_ISL_15320932 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N13/2022 | G | 1440 | I | 4 | 20220812 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | G | 1440 | insE | 1 | 20230217 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | G | 1440 | F | 1 | 20200608 |
| EPI_ISL_10767321 | NSP3 | hCoV-19/Germany/HH-RKI-I-583285/2022 | G | 1440 | insTQA | 5 | 20220219 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | G | 1440 | N | 24 | 20230401 |
| EPI_ISL_19712422 | NSP3 | hCoV-19/Romania/B-587755/2025 | G | 1440 | S | 784 | 20250128 |
| EPI_ISL_13440395 | NSP3 | hCoV-19/USA/CA-LACPHL-AF11031/2022 | G | 1440 | insVKRV | 1 | 20220519 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | G | 1440 | E | 10 | 20230217 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | G | 1440 | L | 42 | 20230106 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | G | 1440 | del | 183 | 20240904 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | G | 1440 | J | 1 | 20230217 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | G | 1440 | Q | 5 | 20230217 |
| EPI_ISL_19823394 | NSP3 | hCoV-19/Japan/FR021-0292/2025 | G | 1440 | C | 1658 | 20250324 |
| EPI_ISL_18994941 | NSP3 | hCoV-19/Japan/PG-599317/2024 | G | 1440 | R | 29 | 20240210 |
| EPI_ISL_17292494 | NSP3 | hCoV-19/Germany/BE-ChVir41998/2023 | G | 1440 | insKFW | 1 | 20230307 |
| EPI_ISL_12215594 | NSP3 | hCoV-19/France/IDF-AphpSA-KM000592/2022 | G | 1440 | stop | 3 | 20220103 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | G | 1440 | Y | 1 | 20211011 |
| EPI_ISL_19708095 | NSP3 | hCoV-19/USA/IA-SHL-2569402/2025 | G | 1440 | D | 1530 | 20250127 |
| EPI_ISL_19195688 | NSP3 | hCoV-19/USA/CA-GBW-GKPLAAAA14581/2024 | G | 1440 | V | 196 | 20240531 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1440 | K | 2 | 20220210 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | M | 1441 | P | 1 | 20220811 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | M | 1441 | F | 30 | 20240706 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | M | 1441 | Y | 2 | 20220219 |
| EPI_ISL_18584984 | NSP3 | hCoV-19/Slovakia/ruvzke-KE_23_00005-H05-KE_23_00000301/2023 | M | 1441 | K | 101 | 20231010 |
| EPI_ISL_19812736 | NSP3 | hCoV-19/USA/CO-CDPHE-43254808/2025 | M | 1441 | T | 571 | 20250318 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | M | 1441 | Q | 49 | 20220910 |
| EPI_ISL_19785101 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-13827/2024 | M | 1441 | L | 312 | 20241205 |
| EPI_ISL_1291798 | NSP3 | hCoV-19/Spain/PV-HUD-66623961/2021 | M | 1441 | D | 1 | 20210130 |
| EPI_ISL_7986463 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG1696/2021 | M | 1441 | W | 1 | 20211121 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | M | 1441 | stop | 3 | 20230217 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | M | 1441 | E | 2 | 20220110 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | M | 1441 | del | 172 | 20240904 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | M | 1441 | S | 4 | 20230407 |
| EPI_ISL_19709311 | NSP3 | hCoV-19/USA/CA-PFZ03751/2024 | M | 1441 | insNAR | 1 | 20241211 |
| EPI_ISL_6691456 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG960/2021 | M | 1441 | A | 2 | 20210920 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | M | 1441 | C | 1 | 20210805 |
| EPI_ISL_8329839 | NSP3 | hCoV-19/Pakistan/DUHS20/2021 | M | 1441 | insCFRCFNVstopFRHA | 5 | 20211225 |
| EPI_ISL_18501048 | NSP3 | hCoV-19/Sweden/K-23-260348/2023 | M | 1441 | insTPAW | 1 | 20231022 |
| EPI_ISL_19810315 | NSP3 | hCoV-19/Japan/FR029-0017/2025 | M | 1441 | V | 468 | 20250301 |
| EPI_ISL_19648539 | NSP3 | hCoV-19/USA/MN-MDH-44644/2024 | M | 1441 | R | 59 | 20241217 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | M | 1441 | H | 3 | 20221201 |
| EPI_ISL_12215594 | NSP3 | hCoV-19/France/IDF-AphpSA-KM000592/2022 | M | 1441 | N | 1 | 20220103 |
| EPI_ISL_19829251 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11245/2025 | M | 1441 | I | 55212 | 20250325 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1442 | N | 2 | 20220210 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | P | 1442 | insFRH | 1 | 20210805 |
| EPI_ISL_1249139 | NSP3 | hCoV-19/England/OXON-F6DD29/2021 | P | 1442 | I | 1 | 20210212 |
| EPI_ISL_583501 | NSP3 | hCoV-19/Brazil/SP-407/2020 | P | 1442 | V | 1 | 20200708 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | P | 1442 | F | 4 | 20211228 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | P | 1442 | R | 8 | 20240706 |
| EPI_ISL_1909923 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH019/2021 | P | 1442 | Y | 1 | 20210314 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | P | 1442 | C | 18 | 20230401 |
| EPI_ISL_19771584 | NSP3 | hCoV-19/USA/NY-PRL-250304_81F06/2025 | P | 1442 | L | 1663 | 20250226 |
| EPI_ISL_19527055 | NSP3 | hCoV-19/Thailand/CU-AMV156/2024 | P | 1442 | H | 683 | 20240715 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | P | 1442 | K | 13 | 20230217 |
| EPI_ISL_3421716 | NSP3 | hCoV-19/England/OXON-FA736D/2020 | P | 1442 | insstopC | 1 | 20201117 |
| EPI_ISL_12215594 | NSP3 | hCoV-19/France/IDF-AphpSA-KM000592/2022 | P | 1442 | stop | 5 | 20220103 |
| EPI_ISL_17884710 | NSP3 | hCoV-19/Sweden/O-9478712176/2023 | P | 1442 | insLRLG | 2 | 20230607 |
| EPI_ISL_19781513 | NSP3 | hCoV-19/Japan/FR047-0015/2025 | P | 1442 | S | 1783 | 20250225 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | P | 1442 | E | 2 | 20230106 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | P | 1442 | insM | 1 | 20230407 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | P | 1442 | del | 176 | 20240904 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | P | 1442 | G | 2 | 20210919 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | P | 1442 | A | 9 | 20230407 |
| EPI_ISL_4440077 | NSP3 | hCoV-19/Ukraine/46-62271/2021 | P | 1442 | D | 1 | 20210622 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | P | 1442 | insW | 1 | 20220210 |
| EPI_ISL_19541007 | NSP3 | hCoV-19/USA/UT-UPHL-241108580941/2024 | P | 1442 | T | 53 | 20241030 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | S | 1443 | C | 32 | 20240706 |
| EPI_ISL_479746 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0075/2020 | S | 1443 | insYCTCLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20200617 |
| EPI_ISL_19481204 | NSP3 | hCoV-19/Hubei/HCDC-HS7394/2024 | S | 1443 | Y | 130 | 20241011 |
| EPI_ISL_1909923 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH019/2021 | S | 1443 | G | 1 | 20210314 |
| EPI_ISL_16258488 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2003/2022 | S | 1443 | E | 2 | 20220815 |
| EPI_ISL_16077951 | NSP3 | hCoV-19/Spain/AS-252293518/2022 | S | 1443 | stop | 2 | 20221121 |
| EPI_ISL_19507999 | NSP3 | hCoV-19/England/CLIMB-CM7Y81R1/2024 | S | 1443 | A | 44 | 20240923 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | S | 1443 | H | 13 | 20230217 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | S | 1443 | W | 2 | 20211228 |
| EPI_ISL_15320932 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-N13/2022 | S | 1443 | I | 5 | 20220812 |
| EPI_ISL_1051641 | NSP3 | hCoV-19/England/OXON-F61F5C/2021 | S | 1443 | M | 1 | 20210129 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | S | 1443 | K | 4 | 20220811 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | S | 1443 | D | 5 | 20230217 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | S | 1443 | R | 2 | 20220110 |
| EPI_ISL_19613697 | NSP3 | hCoV-19/Honduras/CP-338/2024 | S | 1443 | del | 171 | 20240904 |
| EPI_ISL_2438600 | NSP3 | hCoV-19/Pakistan/NIH-Sam12/2021 | S | 1443 | N | 1 | 20210528 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | S | 1443 | L | 10 | 20230217 |
| EPI_ISL_9396156 | NSP3 | hCoV-19/Spain/AS-232221377/2021 | S | 1443 | V | 2 | 20211226 |
| EPI_ISL_15574472 | NSP3 | hCoV-19/Luxembourg/LNS7206660/2022 | S | 1443 | P | 13 | 20221017 |
| EPI_ISL_19796296 | NSP3 | hCoV-19/Australia/SA2469932/2025 | S | 1443 | F | 1701 | 20250227 |
| EPI_ISL_18403606 | NSP3 | hCoV-19/Netherlands/NH-RIVM-131976/2023 | S | 1443 | T | 62 | 20230829 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | Y | 1444 | del | 120 | 20230415 |
| EPI_ISL_1475579 | NSP3 | hCoV-19/England/OXON-F78D3A/2021 | Y | 1444 | N | 2 | 20210225 |
| EPI_ISL_1109979 | NSP3 | hCoV-19/France/PAC-IHU-3383-1/2021 | Y | 1444 | A | 2 | 20210218 |
| EPI_ISL_8762975 | NSP3 | hCoV-19/Indonesia/BT-NIHRD-MI.22.00698/2022 | Y | 1444 | D | 2 | 20220104 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | Y | 1444 | R | 16 | 20230401 |
| EPI_ISL_13483312 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-101543/2022 | Y | 1444 | insVEC | 1 | 20220616 |
| EPI_ISL_19806922 | NSP3 | hCoV-19/Spain/CL-UCHV-49855/2025 | Y | 1444 | H | 1109 | 20250127 |
| EPI_ISL_12215594 | NSP3 | hCoV-19/France/IDF-AphpSA-KM000592/2022 | Y | 1444 | I | 2 | 20220103 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | Y | 1444 | Q | 2 | 20230217 |
| EPI_ISL_19552203 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12149-P1/2024 | Y | 1444 | C | 251 | 20241031 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | Y | 1444 | T | 3 | 20220210 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | Y | 1444 | E | 21 | 20230624 |
| EPI_ISL_19361773 | NSP3 | hCoV-19/USA/MN-MDH-42466/2024 | Y | 1444 | S | 16 | 20240808 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | Y | 1444 | L | 23 | 20230217 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | Y | 1444 | V | 38 | 20220910 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | Y | 1444 | F | 21 | 20240706 |
| EPI_ISL_3079102 | NSP3 | hCoV-19/Scotland/OXON-FA2F6E/2021 | Y | 1444 | K | 1 | 20210708 |
| EPI_ISL_14999057 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1086/2021 | Y | 1444 | stop | 2 | 20210902 |
| EPI_ISL_17530292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1727/2023 | C | 1445 | del | 115 | 20230410 |
| EPI_ISL_950888 | NSP3 | hCoV-19/England/OXON-F46342/2020 | C | 1445 | A | 2 | 20201227 |
| EPI_ISL_12449862 | NSP3 | hCoV-19/Norway/18663/2022 | C | 1445 | G | 21 | 20220412 |
| EPI_ISL_19230069 | NSP3 | hCoV-19/Hubei/HCDC-JZ5642/2024 | C | 1445 | R | 9 | 20240619 |
| EPI_ISL_12584117 | NSP3 | hCoV-19/Turkey/HSGM-G8671/2022 | C | 1445 | Q | 2 | 20220407 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | C | 1445 | T | 4 | 20220110 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | C | 1445 | P | 2 | 20230217 |
| EPI_ISL_18093482 | NSP3 | hCoV-19/USA/CO-CDPHE-41085789/2023 | C | 1445 | I | 22 | 20230624 |
| EPI_ISL_18403048 | NSP3 | hCoV-19/Israel/ICH-741199532/2023 | C | 1445 | S | 27 | 20231008 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | C | 1445 | L | 53 | 20230101 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | C | 1445 | H | 2 | 20211031 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1445 | V | 3 | 20220210 |
| EPI_ISL_18238183 | NSP3 | hCoV-19/Netherlands/NH-RIVM-131034/2023 | C | 1445 | Y | 6 | 20230827 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | C | 1445 | N | 2 | 20240706 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | C | 1445 | stop | 8 | 20230106 |
| EPI_ISL_16258488 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2003/2022 | C | 1445 | insstopECR | 1 | 20220815 |
| EPI_ISL_18443177 | NSP3 | hCoV-19/Bulgaria/325/2023 | C | 1445 | W | 7 | 20230111 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | C | 1445 | insFstopCLIstopACLLT | 1 | 20211009 |
| EPI_ISL_12836560 | NSP3 | hCoV-19/env/USA/CA-SEARCH-87180/2022 | C | 1445 | F | 7 | 20220406 |
| EPI_ISL_19796002 | NSP3 | hCoV-19/Denmark/DCGC-691981/2025 | T | 1446 | N | 594 | 20250303 |
| EPI_ISL_3178955 | NSP3 | hCoV-19/Wales/OXON-FA6D06/2020 | T | 1446 | insT | 1 | 20201120 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | T | 1446 | F | 18 | 20230401 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1446 | Y | 4 | 20230101 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | T | 1446 | insNVstopFRHAFLLYstop | 1 | 20210816 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | T | 1446 | insH | 1 | 20200729 |
| EPI_ISL_842174 | NSP3 | hCoV-19/England/QEUH-A8C8FB/2020 | T | 1446 | E | 1 | 20201016 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | T | 1446 | L | 14 | 20230407 |
| EPI_ISL_19618088 | NSP3 | hCoV-19/USA/WI-WSLH-2402260/2024 | T | 1446 | V | 43 | 20240829 |
| EPI_ISL_950888 | NSP3 | hCoV-19/England/OXON-F46342/2020 | T | 1446 | D | 2 | 20201227 |
| EPI_ISL_19825125 | NSP3 | hCoV-19/USA/CA-PFZ04937/2025 | T | 1446 | A | 515 | 20250320 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | T | 1446 | C | 4 | 20230106 |
| EPI_ISL_4141065 | NSP3 | hCoV-19/USA/FL-CDC-ASC210118510/2021 | T | 1446 | insDSFPS | 1 | 20210817 |
| EPI_ISL_10082630 | NSP3 | hCoV-19/USA/ID-IBL-789866/2022 | T | 1446 | H | 1 | 20220127 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | T | 1446 | M | 3 | 20211103 |
| EPI_ISL_17500646 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13647/2023 | T | 1446 | stop | 4 | 20230318 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | T | 1446 | R | 6 | 20230217 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | T | 1446 | del | 167 | 20230415 |
| EPI_ISL_9399675 | NSP3 | hCoV-19/England/HSLL-345DD6A/2022 | T | 1446 | P | 1 | 20220125 |
| EPI_ISL_19390348 | NSP3 | hCoV-19/USA/MI-UM-L379503846/2024 | T | 1446 | S | 52 | 20240722 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | T | 1446 | insP | 1 | 20200730 |
| EPI_ISL_479743 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0072/2020 | T | 1446 | insGYREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEMCIRDSYCT | 6 | 20200617 |
| EPI_ISL_14633327 | NSP3 | hCoV-19/New Zealand/22XA1165/2022 | T | 1446 | K | 45 | 20220801 |
| EPI_ISL_19829556 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022731_01/2025 | T | 1446 | I | 4788 | 20250214 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | G | 1447 | P | 1 | 20201214 |
| EPI_ISL_19654685 | NSP3 | hCoV-19/Switzerland/VS-ICH-2241140431/2024 | G | 1447 | del | 243 | 20241122 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 1447 | insL | 1 | 20230101 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | G | 1447 | Y | 6 | 20221201 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | G | 1447 | insVstop | 14 | 20230401 |
| EPI_ISL_19008009 | NSP3 | hCoV-19/USA/LA-EVTL21580/2024 | G | 1447 | R | 20 | 20240228 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | G | 1447 | N | 63 | 20230401 |
| EPI_ISL_19317692 | NSP3 | hCoV-19/USA/TX-HMH-M-142146/2024 | G | 1447 | stop | 4 | 20240706 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | G | 1447 | F | 4 | 20230217 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | G | 1447 | E | 3 | 20220131 |
| EPI_ISL_1703758 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-264/2021 | G | 1447 | T | 1 | 20210218 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1447 | K | 2 | 20220210 |
| EPI_ISL_19816572 | NSP3 | hCoV-19/South Korea/KDCA297195/2025 | G | 1447 | V | 1069 | 20250310 |
| EPI_ISL_16995039 | NSP3 | hCoV-19/Japan/TKYmbc35851/2023 | G | 1447 | A | 13 | 20230131 |
| EPI_ISL_19818620 | NSP3 | hCoV-19/USA/DE-DHSS-1287/2025 | G | 1447 | S | 2284 | 20250315 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | G | 1447 | H | 3 | 20230106 |
| EPI_ISL_18857573 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-0033/2024 | G | 1447 | C | 398 | 20240109 |
| EPI_ISL_18443177 | NSP3 | hCoV-19/Bulgaria/325/2023 | G | 1447 | Q | 5 | 20230111 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | G | 1447 | L | 44 | 20230217 |
| EPI_ISL_19707689 | NSP3 | hCoV-19/Japan/TKYnat18280/2025 | G | 1447 | D | 1960 | 20250106 |
| EPI_ISL_19166357 | NSP3 | hCoV-19/China/ZCMU-S176-1787-319906/2021 | G | 1447 | insYREGYC | 1 | 20210801 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 1447 | W | 5 | 20230101 |
| EPI_ISL_1097025 | NSP3 | hCoV-19/Egypt/MASRI-004/2020 | G | 1447 | insLLT | 1 | 20200608 |
| EPI_ISL_17275364 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45890/2023 | Y | 1448 | insstop | 1 | 20230217 |
| EPI_ISL_19654685 | NSP3 | hCoV-19/Switzerland/VS-ICH-2241140431/2024 | Y | 1448 | del | 469 | 20241122 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | Y | 1448 | L | 14 | 20230217 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | Y | 1448 | insstopQRILLS | 1 | 20230217 |
| EPI_ISL_18788373 | NSP3 | hCoV-19/Sweden/O-14_SE300_DC24-000011/2024 | Y | 1448 | D | 14 | 20240112 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | Y | 1448 | I | 3 | 20211228 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | Y | 1448 | V | 10 | 20230401 |
| EPI_ISL_19507696 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10149703/2024 | Y | 1448 | S | 9 | 20240925 |
| EPI_ISL_3464683 | NSP3 | hCoV-19/USA/ID-IBL-637518/2020 | Y | 1448 | E | 1 | 20200730 |
| EPI_ISL_19507697 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293263/2024 | Y | 1448 | stop | 15 | 20241011 |
| EPI_ISL_19735668 | NSP3 | hCoV-19/Japan/FR014-0045/2025 | Y | 1448 | C | 332 | 20250116 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1448 | Q | 4 | 20230101 |
| EPI_ISL_19805539 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U570-1/2025 | Y | 1448 | H | 1603 | 20250220 |
| EPI_ISL_18443177 | NSP3 | hCoV-19/Bulgaria/325/2023 | Y | 1448 | R | 4 | 20230111 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | Y | 1448 | M | 1 | 20230217 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | Y | 1448 | A | 2 | 20220131 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | Y | 1448 | W | 5 | 20221201 |
| EPI_ISL_8804033 | NSP3 | hCoV-19/India/GA-NCCS-211990064/2021 | Y | 1448 | T | 3 | 20210718 |
| EPI_ISL_19557412 | NSP3 | hCoV-19/France/IDF-IPP12332/2024 | Y | 1448 | N | 80 | 20241028 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | Y | 1448 | insXX | 1 | 20211227 |
| EPI_ISL_18625013 | NSP3 | hCoV-19/France/CVL-ChuTo-285369/2023 | Y | 1448 | F | 30 | 20231121 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | R | 1449 | F | 1 | 20210701 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | R | 1449 | stop | 13 | 20230217 |
| EPI_ISL_17425909 | NSP3 | hCoV-19/India/MH-CSIR-2919/2023 | R | 1449 | T | 32 | 20230401 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | R | 1449 | Q | 10 | 20230217 |
| EPI_ISL_12005435 | NSP3 | hCoV-19/Thailand/NIC_TRG_13945/2022 | R | 1449 | N | 3 | 20220315 |
| EPI_ISL_19654685 | NSP3 | hCoV-19/Switzerland/VS-ICH-2241140431/2024 | R | 1449 | del | 149 | 20241122 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | R | 1449 | insstopILS | 1 | 20211011 |
| EPI_ISL_1909923 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH019/2021 | R | 1449 | C | 1 | 20210314 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | R | 1449 | A | 8 | 20230108 |
| EPI_ISL_951086 | NSP3 | hCoV-19/England/OXON-F49F87/2021 | R | 1449 | Y | 1 | 20210104 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | R | 1449 | L | 11 | 20221201 |
| EPI_ISL_19784206 | NSP3 | hCoV-19/USA/NC-CDC-LC1134729/2025 | R | 1449 | G | 2274 | 20250310 |
| EPI_ISL_17211171 | NSP3 | hCoV-19/env/France/NAQ-CHUL-51-5/2022 | R | 1449 | insRRLF | 2 | 20220908 |
| EPI_ISL_19772676 | NSP3 | hCoV-19/Canada/QC-L00850136001/2025 | R | 1449 | I | 166 | 20250302 |
| EPI_ISL_12573676 | NSP3 | hCoV-19/USA/ID-IBL-816443/2022 | R | 1449 | E | 2 | 20220427 |
| EPI_ISL_19624306 | NSP3 | hCoV-19/Slovenia/IMI-V0-6902/2024 | R | 1449 | K | 362 | 20241202 |
| EPI_ISL_19556149 | NSP3 | hCoV-19/Japan/FR302-1441/2024 | R | 1449 | S | 160 | 20240930 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | E | 1450 | R | 35 | 20240710 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | E | 1450 | H | 16 | 20230401 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | E | 1450 | I | 2 | 20230217 |
| EPI_ISL_19727332 | NSP3 | hCoV-19/USA/NY-PRL-250211_82G07/2025 | E | 1450 | G | 394 | 20250202 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | E | 1450 | S | 3 | 20230217 |
| EPI_ISL_19510966 | NSP3 | hCoV-19/USA/LA-EVTL23041/2024 | E | 1450 | A | 405 | 20240911 |
| EPI_ISL_19780463 | NSP3 | hCoV-19/USA/NY-PRL-250311_82E11/2025 | E | 1450 | K | 835 | 20250227 |
| EPI_ISL_17247006 | NSP3 | hCoV-19/Slovenia/6833/2023 | E | 1450 | stop | 51 | 20230213 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | E | 1450 | F | 2 | 20220131 |
| EPI_ISL_18364591 | NSP3 | hCoV-19/USA/CA-SLOPH-C2165/2023 | E | 1450 | insTRG | 1 | 20230910 |
| EPI_ISL_18443177 | NSP3 | hCoV-19/Bulgaria/325/2023 | E | 1450 | L | 6 | 20230111 |
| EPI_ISL_19654685 | NSP3 | hCoV-19/Switzerland/VS-ICH-2241140431/2024 | E | 1450 | del | 143 | 20241122 |
| EPI_ISL_951086 | NSP3 | hCoV-19/England/OXON-F49F87/2021 | E | 1450 | N | 1 | 20210104 |
| EPI_ISL_19826006 | NSP3 | hCoV-19/Singapore/Y25R15MSC121/2025 | E | 1450 | D | 780 | 20250408 |
| EPI_ISL_1909923 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH019/2021 | E | 1450 | Y | 1 | 20210314 |
| EPI_ISL_14213483 | NSP3 | hCoV-19/Denmark/DCGC-556714/2022 | E | 1450 | Z | 27 | 20220725 |
| EPI_ISL_18965451 | NSP3 | hCoV-19/USA/MN-MDH-40774/2024 | E | 1450 | V | 136 | 20240205 |
| EPI_ISL_18493404 | NSP3 | hCoV-19/France/BFC-IPP25846/2023 | E | 1450 | Q | 32 | 20231030 |
| EPI_ISL_17711036 | NSP3 | hCoV-19/Netherlands/NH-RIVM-130137/2023 | G | 1451 | R | 39 | 20230313 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 1451 | P | 5 | 20230108 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | G | 1451 | del | 140 | 20230415 |
| EPI_ISL_19748971 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00022414_01/2024 | G | 1451 | S | 498 | 20241122 |
| EPI_ISL_17275364 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45890/2023 | G | 1451 | I | 1 | 20230217 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | G | 1451 | T | 2 | 20211031 |
| EPI_ISL_8807016 | NSP3 | hCoV-19/India/GA-NCCS-3055100258338/2021 | G | 1451 | K | 7 | 20211009 |
| EPI_ISL_8194882 | NSP3 | hCoV-19/Egypt/NRC-6352/2020 | G | 1451 | insC | 2 | 20200726 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | G | 1451 | L | 29 | 20240710 |
| EPI_ISL_17853606 | NSP3 | hCoV-19/USA/TX-CDC-LC1042933/2023 | G | 1451 | A | 146 | 20230515 |
| EPI_ISL_19670928 | NSP3 | hCoV-19/New Caledonia/CHTv14-3630259/2024 | G | 1451 | V | 644 | 20241228 |
| EPI_ISL_950888 | NSP3 | hCoV-19/England/OXON-F46342/2020 | G | 1451 | E | 1 | 20201227 |
| EPI_ISL_18643241 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69542895/2023 | G | 1451 | F | 8 | 20231213 |
| EPI_ISL_19676772 | NSP3 | hCoV-19/Australia/QLD0x0150B2/2025 | G | 1451 | C | 909 | 20250101 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | G | 1451 | N | 5 | 20220131 |
| EPI_ISL_19810416 | NSP3 | hCoV-19/Singapore/Y25R13MSC20/2025 | G | 1451 | D | 680 | 20250321 |
| EPI_ISL_5923229 | NSP3 | hCoV-19/Senegal/SN-IRVAC-016/2021 | G | 1451 | insYLNSTNVTIASYREG | 1 | 20210716 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | Y | 1452 | del | 128 | 20230415 |
| EPI_ISL_17275364 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45890/2023 | Y | 1452 | L | 7 | 20230217 |
| EPI_ISL_18540813 | NSP3 | hCoV-19/Spain/AN-PMC-38594/2023 | Y | 1452 | C | 21 | 20231019 |
| EPI_ISL_1909923 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH019/2021 | Y | 1452 | P | 1 | 20210314 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | Y | 1452 | Q | 1 | 20230407 |
| EPI_ISL_1051641 | NSP3 | hCoV-19/England/OXON-F61F5C/2021 | Y | 1452 | W | 1 | 20210129 |
| EPI_ISL_19470096 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17286065/2024 | Y | 1452 | D | 1 | 20240917 |
| EPI_ISL_19226513 | NSP3 | hCoV-19/Lithuania/MB240416_0057/2024 | Y | 1452 | H | 43 | 20240409 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | Y | 1452 | I | 6 | 20230217 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | Y | 1452 | R | 3 | 20221201 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | Y | 1452 | F | 68 | 20240710 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | Y | 1452 | insELYstop | 11 | 20230401 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | Y | 1452 | T | 3 | 20211121 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | Y | 1452 | V | 5 | 20211228 |
| EPI_ISL_5639792 | NSP3 | hCoV-19/Georgia/Tb-S1456/2021 | Y | 1452 | N | 1 | 20210927 |
| EPI_ISL_18443177 | NSP3 | hCoV-19/Bulgaria/325/2023 | Y | 1452 | E | 4 | 20230111 |
| EPI_ISL_18321968 | NSP3 | hCoV-19/USA/TX-HMH-M-133816/2023 | Y | 1452 | stop | 8 | 20230913 |
| EPI_ISL_3242922 | NSP3 | hCoV-19/USA/ID-IBL-640883/2020 | Y | 1452 | insstopTLL | 1 | 20200809 |
| EPI_ISL_8807016 | NSP3 | hCoV-19/India/GA-NCCS-3055100258338/2021 | Y | 1452 | A | 6 | 20211009 |
| EPI_ISL_12955405 | NSP3 | hCoV-19/Russia/LIP-CRIE-7730694373/2022 | Y | 1452 | S | 6 | 20220215 |
| EPI_ISL_19800324 | NSP3 | hCoV-19/Japan/FR032-0059/2025 | L | 1453 | F | 559 | 20250205 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | L | 1453 | C | 11 | 20230401 |
| EPI_ISL_12215594 | NSP3 | hCoV-19/France/IDF-AphpSA-KM000592/2022 | L | 1453 | Y | 2 | 20220103 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | L | 1453 | del | 133 | 20240710 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1453 | D | 1 | 20210318 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | L | 1453 | A | 2 | 20230407 |
| EPI_ISL_19505746 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGYFA/2024 | L | 1453 | W | 20 | 20240926 |
| EPI_ISL_17622382 | NSP3 | hCoV-19/Italy/LOM-ASST-69359235/2023 | L | 1453 | T | 12 | 20230502 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | L | 1453 | I | 8 | 20211011 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | L | 1453 | insLYWLQR | 7 | 20230401 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | L | 1453 | R | 3 | 20220116 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 1453 | stop | 9 | 20230101 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | L | 1453 | G | 1 | 20210319 |
| EPI_ISL_19385427 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YEZ99/2024 | L | 1453 | V | 29 | 20240708 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | L | 1453 | insLYWLQRRLF | 3 | 20210310 |
| EPI_ISL_19328696 | NSP3 | hCoV-19/USA/NM-NMDOH-022350/2024 | L | 1453 | S | 386 | 20240701 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | L | 1453 | H | 1 | 20211031 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | L | 1453 | insFELYstopC | 1 | 20210915 |
| EPI_ISL_10035431 | NSP3 | hCoV-19/Netherlands/OV-RIVM-86917/2022 | L | 1453 | insNHQ | 1 | 20220204 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | L | 1453 | insLYWLQRRG | 1 | 20210812 |
| EPI_ISL_18220683 | NSP3 | hCoV-19/Luxembourg/LNS3432299/2023 | L | 1453 | M | 33 | 20230817 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | N | 1454 | L | 8 | 20220117 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1454 | insKVV | 3 | 20230108 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | N | 1454 | R | 14 | 20230401 |
| EPI_ISL_1077253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-22725/2020 | N | 1454 | M | 1 | 20201230 |
| EPI_ISL_19463262 | NSP3 | hCoV-19/Poland/0385WSN2024_wsseol/2024 | N | 1454 | D | 230 | 20240919 |
| EPI_ISL_5923236 | NSP3 | hCoV-19/Senegal/SN-IR1-0074232/2021 | N | 1454 | insSTNVTIATYCSYREGYLN | 2 | 20211025 |
| EPI_ISL_18842632 | NSP3 | hCoV-19/Sweden/G-24-500544/2024 | N | 1454 | Y | 50 | 20240102 |
| EPI_ISL_8718063 | NSP3 | hCoV-19/USA/ID-IBL-781558/2022 | N | 1454 | insL | 1 | 20220103 |
| EPI_ISL_12321621 | NSP3 | hCoV-19/Turkey/HSGM-GS2272/2022 | N | 1454 | G | 2 | 20220405 |
| EPI_ISL_19458866 | NSP3 | hCoV-19/France/HDF-IPP10565/2024 | N | 1454 | T | 99 | 20240822 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | N | 1454 | C | 1 | 20210812 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | N | 1454 | F | 3 | 20211031 |
| EPI_ISL_18992232 | NSP3 | hCoV-19/Mexico/YUC_CIAD_01000616/2024 | N | 1454 | H | 128 | 20240212 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | N | 1454 | del | 131 | 20240710 |
| EPI_ISL_19472503 | NSP3 | hCoV-19/Wales/CLIMB-CM7YKZMB/2024 | N | 1454 | S | 221 | 20240919 |
| EPI_ISL_12320497 | NSP3 | hCoV-19/Turkey/HSGM-GS2198/2022 | N | 1454 | E | 14 | 20220401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1454 | V | 1 | 20210318 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | N | 1454 | Q | 2 | 20230407 |
| EPI_ISL_19788448 | NSP3 | hCoV-19/Japan/7GA-057/2025 | N | 1454 | K | 245 | 20250226 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | N | 1454 | stop | 9 | 20211228 |
| EPI_ISL_18700968 | NSP3 | hCoV-19/Singapore/R92MR193/2023 | N | 1454 | B | 15 | 20231213 |
| EPI_ISL_18714322 | NSP3 | hCoV-19/USA/OH-ODH-SC3033654/2023 | N | 1454 | I | 9 | 20231130 |
| EPI_ISL_718256 | NSP3 | hCoV-19/Slovakia/UKBA-408/2020 | S | 1455 | insNG | 1 | 20201130 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | S | 1455 | N | 2 | 20230217 |
| EPI_ISL_19804881 | NSP3 | hCoV-19/USA/RI-USAFSAM-S23499/2025 | S | 1455 | P | 107 | 20250220 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | S | 1455 | G | 3 | 20221225 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | S | 1455 | D | 1 | 20210915 |
| EPI_ISL_1309760 | NSP3 | hCoV-19/England/OXON-F7614F/2021 | S | 1455 | R | 1 | 20210213 |
| EPI_ISL_18443177 | NSP3 | hCoV-19/Bulgaria/325/2023 | S | 1455 | stop | 6 | 20230111 |
| EPI_ISL_12215607 | NSP3 | hCoV-19/France/IDF-AphpSA-ZJ000589/2022 | S | 1455 | I | 2 | 20220102 |
| EPI_ISL_8424640 | NSP3 | hCoV-19/USA/OH-CDC-MMB12026525/2021 | S | 1455 | insPRE | 1 | 20211208 |
| EPI_ISL_19696459 | NSP3 | hCoV-19/Tunisia/CNH-9651/2024 | S | 1455 | Y | 153 | 20241016 |
| EPI_ISL_19821923 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136040/2025 | S | 1455 | F | 4547 | 20250327 |
| EPI_ISL_19656900 | NSP3 | hCoV-19/Germany/BE-RKI-I-1146998/2024 | S | 1455 | A | 215 | 20241209 |
| EPI_ISL_2460141 | NSP3 | hCoV-19/India/DL-NCDC-1109186/2021 | S | 1455 | insTNV | 2 | 20210224 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | S | 1455 | V | 6 | 20220117 |
| EPI_ISL_18781569 | NSP3 | hCoV-19/Japan/PG-588318/2023 | S | 1455 | T | 100 | 20231222 |
| EPI_ISL_3790456 | NSP3 | hCoV-19/Sweden/10037873/2021 | S | 1455 | K | 2 | 20210322 |
| EPI_ISL_12694397 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726471913/2022 | S | 1455 | H | 3 | 20220128 |
| EPI_ISL_17305756 | NSP3 | hCoV-19/USA/CA-HLX-STM-KCANJERCB/2023 | S | 1455 | C | 17 | 20230302 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | S | 1455 | L | 20 | 20230401 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | S | 1455 | del | 131 | 20240710 |
| EPI_ISL_8803760 | NSP3 | hCoV-19/India/GA-NCCS-3055100219829/2021 | S | 1455 | E | 2 | 20210731 |
| EPI_ISL_19039086 | NSP3 | hCoV-19/Japan/PG-566466/2023 | S | 1455 | insQGG | 1 | 20230823 |
| EPI_ISL_10868215 | NSP3 | hCoV-19/USA/UT-UPHL-220304036065/2022 | S | 1455 | insV | 1 | 20220219 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | T | 1456 | H | 1 | 20210817 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | T | 1456 | del | 139 | 20240710 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | T | 1456 | V | 10 | 20220117 |
| EPI_ISL_8806458 | NSP3 | hCoV-19/India/GA-NCCS-3055100230611/2021 | T | 1456 | insMHYC | 1 | 20210820 |
| EPI_ISL_10924594 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11813/2022 | T | 1456 | Q | 10 | 20220228 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | T | 1456 | M | 1 | 20230407 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | T | 1456 | C | 21 | 20230401 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1456 | L | 18 | 20230101 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | T | 1456 | insMSLLQ | 4 | 20210328 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | T | 1456 | R | 1 | 20210915 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1456 | Y | 7 | 20220210 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | T | 1456 | K | 1 | 20220110 |
| EPI_ISL_19781674 | NSP3 | hCoV-19/USA/NE-RP251946/2025 | T | 1456 | N | 315 | 20250303 |
| EPI_ISL_19470096 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17286065/2024 | T | 1456 | A | 123 | 20240917 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | T | 1456 | F | 11 | 20230401 |
| EPI_ISL_19828175 | NSP3 | hCoV-19/Australia/QLD0x0154CC/2025 | T | 1456 | I | 29190 | 20250401 |
| EPI_ISL_17022648 | NSP3 | hCoV-19/Chile/RM-118687/2021 | T | 1456 | G | 2 | 20210629 |
| EPI_ISL_19090685 | NSP3 | hCoV-19/Japan/FR021-0204/2024 | T | 1456 | P | 18 | 20240307 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | T | 1456 | stop | 2 | 20211031 |
| EPI_ISL_19323969 | NSP3 | hCoV-19/USA/MS-MSPHL-0268/2024 | T | 1456 | S | 61 | 20240722 |
| EPI_ISL_15830952 | NSP3 | hCoV-19/Israel/SMC-7109402/2022 | N | 1457 | Q | 7 | 20221113 |
| EPI_ISL_19769249 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422245930/2025 | N | 1457 | T | 130 | 20250120 |
| EPI_ISL_19773216 | NSP3 | hCoV-19/USA/IL-CDC-LC1134496/2025 | N | 1457 | B | 7 | 20250226 |
| EPI_ISL_18908612 | NSP3 | hCoV-19/USA/NY-CDC-LC1094518/2024 | N | 1457 | Y | 78 | 20240130 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | N | 1457 | R | 12 | 20220811 |
| EPI_ISL_8803760 | NSP3 | hCoV-19/India/GA-NCCS-3055100219829/2021 | N | 1457 | insstop | 1 | 20210731 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | N | 1457 | E | 23 | 20240710 |
| EPI_ISL_19527499 | NSP3 | hCoV-19/Spain/CT-HCB-4272/2024 | N | 1457 | K | 86 | 20240904 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | N | 1457 | insXXX | 1 | 20230614 |
| EPI_ISL_4279328 | NSP3 | hCoV-19/Brazil/SP-BT2021082506/2021 | N | 1457 | insstopX | 1 | 20210824 |
| EPI_ISL_10740233 | NSP3 | hCoV-19/Singapore/2261/2022 | N | 1457 | insA | 1 | 20220228 |
| EPI_ISL_13961934 | NSP3 | hCoV-19/Morocco/FMP-431/2021 | N | 1457 | L | 10 | 20211228 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | N | 1457 | F | 1 | 20210817 |
| EPI_ISL_19334598 | NSP3 | hCoV-19/Egypt/CPHL-EGY24137/2024 | N | 1457 | I | 25 | 20240624 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | N | 1457 | del | 85 | 20230415 |
| EPI_ISL_17603085 | NSP3 | hCoV-19/Thailand/NIC_CBI_1251/2023 | N | 1457 | V | 2 | 20230411 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | N | 1457 | H | 4 | 20220104 |
| EPI_ISL_19820096 | NSP3 | hCoV-19/Canada/ON-SHL-202501335/2025 | N | 1457 | S | 371 | 20250322 |
| EPI_ISL_19795343 | NSP3 | hCoV-19/USA/NY-CDC-LC1135426/2025 | N | 1457 | D | 169 | 20250313 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | N | 1457 | stop | 3 | 20221225 |
| EPI_ISL_8803782 | NSP3 | hCoV-19/India/MH-NCCS-55424/2021 | N | 1457 | A | 1 | 20210731 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1457 | P | 5 | 20220210 |
| EPI_ISL_10406964 | NSP3 | hCoV-19/Poland/WSSEGorzow-22S1544/2022 | N | 1457 | insKVGG | 2 | 20220216 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | N | 1457 | M | 1 | 20211222 |
| EPI_ISL_19527917 | NSP3 | hCoV-19/Germany/BB-RKI-I-1145781/2024 | V | 1458 | F | 183 | 20241014 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1458 | T | 8 | 20230108 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | V | 1458 | K | 2 | 20211121 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | V | 1458 | del | 71 | 20230415 |
| EPI_ISL_12296480 | NSP3 | hCoV-19/France/IDF-AphpSA-OL000513/2021 | V | 1458 | M | 6 | 20211213 |
| EPI_ISL_10924594 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11813/2022 | V | 1458 | R | 10 | 20220228 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | V | 1458 | P | 3 | 20211228 |
| EPI_ISL_3790456 | NSP3 | hCoV-19/Sweden/10037873/2021 | V | 1458 | stop | 1 | 20210322 |
| EPI_ISL_18780198 | NSP3 | hCoV-19/Sichuan/LSZCDC-1222-10/2023 | V | 1458 | G | 130 | 20231214 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | V | 1458 | Y | 6 | 20220116 |
| EPI_ISL_19803215 | NSP3 | hCoV-19/env/Germany/BY-LGL-6511733/2025 | V | 1458 | A | 711 | 20250305 |
| EPI_ISL_19738440 | NSP3 | hCoV-19/Chile/MA-1066/2025 | V | 1458 | I | 5459 | 20250102 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | V | 1458 | S | 10 | 20221018 |
| EPI_ISL_1925034 | NSP3 | hCoV-19/USA/MI-CDC-QDX24042289/2021 | V | 1458 | E | 1 | 20210415 |
| EPI_ISL_17478145 | NSP3 | hCoV-19/USA/TX-CDC-QDX48587224/2023 | V | 1458 | D | 7 | 20230330 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1458 | Q | 3 | 20220210 |
| EPI_ISL_8807016 | NSP3 | hCoV-19/India/GA-NCCS-3055100258338/2021 | V | 1458 | C | 7 | 20211009 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | V | 1458 | L | 185 | 20240710 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | T | 1459 | H | 6 | 20220116 |
| EPI_ISL_19521155 | NSP3 | hCoV-19/Wales/CLIMB-CM7YFHPZ/2024 | T | 1459 | A | 176 | 20241014 |
| EPI_ISL_12321714 | NSP3 | hCoV-19/Turkey/HSGM-GS2663/2022 | T | 1459 | P | 3 | 20220405 |
| EPI_ISL_430719 | NSP3 | hCoV-19/Spain/MD-H12-LP29/2020 | T | 1459 | stop | 1 | 20200311 |
| EPI_ISL_1184558 | NSP3 | hCoV-19/Sri Lanka/Genelabs_CA53555/2021 | T | 1459 | M | 2 | 20210205 |
| EPI_ISL_19822547 | NSP3 | hCoV-19/Belgium/Sciensano-LS-S3781/2025 | T | 1459 | I | 1294 | 20250304 |
| EPI_ISL_1167192 | NSP3 | hCoV-19/Egypt/MASRI-C5-020/2020 | T | 1459 | Q | 1 | 20200913 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | T | 1459 | C | 4 | 20220104 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | T | 1459 | V | 21 | 20230217 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | T | 1459 | del | 71 | 20230415 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | T | 1459 | insstopTP | 1 | 20220117 |
| EPI_ISL_14718232 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19515/2022 | T | 1459 | K | 1 | 20220805 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | T | 1459 | R | 6 | 20221018 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | T | 1459 | W | 3 | 20210520 |
| EPI_ISL_17530305 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13901/2023 | T | 1459 | L | 100 | 20230404 |
| EPI_ISL_19230247 | NSP3 | hCoV-19/Henan/XCCDC061316/2024 | T | 1459 | S | 13 | 20240615 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | T | 1459 | F | 2 | 20210817 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | T | 1459 | insK | 1 | 20210919 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | T | 1459 | Y | 21 | 20240710 |
| EPI_ISL_1077253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-22725/2020 | T | 1459 | G | 1 | 20201230 |
| EPI_ISL_3756896 | NSP3 | hCoV-19/USA/ID-IBL-746949/2021 | T | 1459 | insEKA | 1 | 20210806 |
| EPI_ISL_18724670 | NSP3 | hCoV-19/Spain/GA-SCQ_279936/2023 | T | 1459 | N | 30 | 20231025 |
| EPI_ISL_19768630 | NSP3 | hCoV-19/Taiwan/CDC-F94662/2025 | I | 1460 | V | 2732 | 20250304 |
| EPI_ISL_1184558 | NSP3 | hCoV-19/Sri Lanka/Genelabs_CA53555/2021 | I | 1460 | A | 1 | 20210205 |
| EPI_ISL_19351715 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242808/2024 | I | 1460 | stop | 22 | 20240710 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1460 | P | 1 | 20220210 |
| EPI_ISL_19645544 | NSP3 | hCoV-19/Sichuan/DZCDC-CX0144/2024 | I | 1460 | F | 43 | 20240510 |
| EPI_ISL_17836683 | NSP3 | hCoV-19/Shanghai/SCDC-XG06-8220/2023 | I | 1460 | M | 45 | 20230606 |
| EPI_ISL_17530305 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13901/2023 | I | 1460 | N | 6 | 20230404 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | I | 1460 | G | 1 | 20211031 |
| EPI_ISL_10594085 | NSP3 | hCoV-19/Sweden/7113234723/2022 | I | 1460 | K | 3 | 20220208 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | I | 1460 | del | 74 | 20230415 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | I | 1460 | L | 60 | 20230217 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | I | 1460 | Q | 2 | 20220811 |
| EPI_ISL_19690311 | NSP3 | hCoV-19/Luxembourg/LNS2460109/2024 | I | 1460 | S | 79 | 20241227 |
| EPI_ISL_19742476 | NSP3 | hCoV-19/Poland/Kce-18/2025 | I | 1460 | T | 4608 | 20250115 |
| EPI_ISL_1752060 | NSP3 | hCoV-19/Germany/BY-MVP-000003945/2021 | I | 1460 | J | 2 | 20210214 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | I | 1460 | Y | 53 | 20230401 |
| EPI_ISL_18546525 | NSP3 | hCoV-19/USA/TX-HMH-M-135109/2023 | I | 1460 | insQPTVL | 1 | 20231020 |
| EPI_ISL_10891816 | NSP3 | hCoV-19/Indonesia/BT-NIHRD-MI_22_01053/2022 | I | 1460 | C | 1 | 20220105 |
| EPI_ISL_19824766 | NSP3 | hCoV-19/France/ARA-RELAB-HCL725000040601/2025 | A | 1461 | V | 3833 | 20250319 |
| EPI_ISL_16127625 | NSP3 | hCoV-19/Spain/CT-BST-9927129440/2022 | A | 1461 | P | 30 | 20221128 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | A | 1461 | K | 7 | 20221018 |
| EPI_ISL_17530305 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13901/2023 | A | 1461 | R | 3 | 20230404 |
| EPI_ISL_17022648 | NSP3 | hCoV-19/Chile/RM-118687/2021 | A | 1461 | D | 2 | 20210629 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | A | 1461 | stop | 6 | 20211228 |
| EPI_ISL_19623850 | NSP3 | hCoV-19/South Korea/KDCA296558/2024 | A | 1461 | G | 6 | 20241121 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | A | 1461 | N | 1 | 20220811 |
| EPI_ISL_8806464 | NSP3 | hCoV-19/India/MH-NCCS-2749001909933/2021 | A | 1461 | M | 4 | 20210830 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | A | 1461 | I | 4 | 20220116 |
| EPI_ISL_19831790 | NSP3 | hCoV-19/Ireland/D-SVUH-FBA98558-033/2025 | A | 1461 | T | 1718 | 20250406 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | A | 1461 | C | 21 | 20230401 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | A | 1461 | del | 68 | 20230415 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | A | 1461 | L | 14 | 20220117 |
| EPI_ISL_19657747 | NSP3 | hCoV-19/Canada/AB-ABPHL-129094/2024 | A | 1461 | S | 72 | 20241213 |
| EPI_ISL_19566267 | NSP3 | hCoV-19/Colombia/ANT-LDSP5685/2024 | A | 1461 | E | 89 | 20241126 |
| EPI_ISL_8806458 | NSP3 | hCoV-19/India/GA-NCCS-3055100230611/2021 | A | 1461 | Y | 2 | 20210820 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | A | 1461 | insK | 1 | 20211015 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | A | 1461 | W | 50 | 20230401 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | A | 1461 | F | 19 | 20220910 |
| EPI_ISL_6274989 | NSP3 | hCoV-19/England/NORW-30BE90F/2021 | A | 1461 | Q | 6 | 20211031 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | T | 1462 | del | 77 | 20230415 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | T | 1462 | F | 53 | 20230401 |
| EPI_ISL_19468112 | NSP3 | hCoV-19/Peru/LIM-INS-50199/2024 | T | 1462 | N | 173 | 20240619 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | T | 1462 | insY | 1 | 20210121 |
| EPI_ISL_19820155 | NSP3 | hCoV-19/USA/NY-PRL-250401_82D10/2025 | T | 1462 | I | 2839 | 20250317 |
| EPI_ISL_8806458 | NSP3 | hCoV-19/India/GA-NCCS-3055100230611/2021 | T | 1462 | W | 1 | 20210820 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | T | 1462 | stop | 1 | 20221225 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | T | 1462 | V | 17 | 20220910 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | T | 1462 | H | 23 | 20230401 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 1462 | R | 5 | 20230116 |
| EPI_ISL_12291379 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1113/2022 | T | 1462 | G | 3 | 20220123 |
| EPI_ISL_4440101 | NSP3 | hCoV-19/Ukraine/68-62556/2021 | T | 1462 | insPFRIA | 1 | 20210614 |
| EPI_ISL_18546525 | NSP3 | hCoV-19/USA/TX-HMH-M-135109/2023 | T | 1462 | L | 29 | 20231020 |
| EPI_ISL_17760107 | NSP3 | hCoV-19/USA/WA-UW-19688/2023 | T | 1462 | S | 36 | 20230314 |
| EPI_ISL_19795069 | NSP3 | hCoV-19/French Guiana/IPG202500030/2025 | T | 1462 | A | 271 | 20250305 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | T | 1462 | Q | 4 | 20210917 |
| EPI_ISL_11402573 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-14/2022 | T | 1462 | insR | 1 | 20220203 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1462 | insRCLNR | 1 | 20230108 |
| EPI_ISL_18717861 | NSP3 | hCoV-19/England/CLIMB-CM7YJ4CX/2023 | T | 1462 | P | 59 | 20231223 |
| EPI_ISL_17530305 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13901/2023 | T | 1462 | C | 4 | 20230404 |
| EPI_ISL_5881212 | NSP3 | hCoV-19/Thailand/Loei_SEQ19155/2021 | T | 1462 | Y | 1 | 20211001 |
| EPI_ISL_15389059 | NSP3 | hCoV-19/Morocco/FMP432/2022 | Y | 1463 | I | 2 | 20220110 |
| EPI_ISL_2707316 | NSP3 | hCoV-19/England/OXON-F83561/2021 | Y | 1463 | K | 2 | 20210609 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1463 | V | 2 | 20230108 |
| EPI_ISL_19430868 | NSP3 | hCoV-19/Taiwan/S058/2024 | Y | 1463 | D | 108 | 20240410 |
| EPI_ISL_17622382 | NSP3 | hCoV-19/Italy/LOM-ASST-69359235/2023 | Y | 1463 | S | 9 | 20230502 |
| EPI_ISL_8243747 | NSP3 | hCoV-19/Turkey/HSGM-F11839/2021 | Y | 1463 | insC | 1 | 20211223 |
| EPI_ISL_19363426 | NSP3 | hCoV-19/Japan/FR049-0758/2024 | Y | 1463 | C | 121 | 20240805 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | Y | 1463 | del | 90 | 20240414 |
| EPI_ISL_19507700 | NSP3 | hCoV-19/Italy/LOM-UNIBS-09264259/2024 | Y | 1463 | stop | 5 | 20240926 |
| EPI_ISL_17530305 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13901/2023 | Y | 1463 | F | 13 | 20230404 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | Y | 1463 | L | 22 | 20230217 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | Y | 1463 | P | 4 | 20210917 |
| EPI_ISL_19828714 | NSP3 | hCoV-19/Italy/PUG_UNIBA_APU-Ba1369/2025 | Y | 1463 | H | 1492 | 20250329 |
| EPI_ISL_12784758 | NSP3 | hCoV-19/Greece/22161/2022 | Y | 1463 | N | 24 | 20220408 |
| EPI_ISL_999140 | NSP3 | hCoV-19/England/OXON-F568B9/2021 | Y | 1463 | insGLA | 1 | 20210114 |
| EPI_ISL_2460141 | NSP3 | hCoV-19/India/DL-NCDC-1109186/2021 | Y | 1463 | G | 2 | 20210224 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | Y | 1463 | R | 5 | 20220210 |
| EPI_ISL_8803733 | NSP3 | hCoV-19/India/GA-NCCS-3055200157771/2021 | Y | 1463 | T | 1 | 20210804 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | C | 1464 | K | 1 | 20220117 |
| EPI_ISL_19643660 | NSP3 | hCoV-19/USA/TX-HMH-M-146847/2024 | C | 1464 | S | 306 | 20241029 |
| EPI_ISL_8172925 | NSP3 | hCoV-19/Moldova/Nr-103014/2021 | C | 1464 | N | 3 | 20211111 |
| EPI_ISL_17564122 | NSP3 | hCoV-19/South Korea/KDCA230962/2023 | C | 1464 | Y | 27 | 20230409 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | C | 1464 | T | 54 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1464 | I | 3 | 20220210 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | C | 1464 | Q | 1 | 20221225 |
| EPI_ISL_18546525 | NSP3 | hCoV-19/USA/TX-HMH-M-135109/2023 | C | 1464 | L | 16 | 20231020 |
| EPI_ISL_14584697 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16383/2022 | C | 1464 | W | 7 | 20220726 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | C | 1464 | del | 116 | 20230529 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | C | 1464 | V | 17 | 20230401 |
| EPI_ISL_999140 | NSP3 | hCoV-19/England/OXON-F568B9/2021 | C | 1464 | A | 1 | 20210114 |
| EPI_ISL_18561415 | NSP3 | hCoV-19/Russia/ME-RII-MH148987S/2023 | C | 1464 | G | 15 | 20231030 |
| EPI_ISL_17286577 | NSP3 | hCoV-19/USA/CA-CDC-QDX47771763/2023 | C | 1464 | R | 10 | 20230308 |
| EPI_ISL_8718063 | NSP3 | hCoV-19/USA/ID-IBL-781558/2022 | C | 1464 | M | 1 | 20220103 |
| EPI_ISL_18797564 | NSP3 | hCoV-19/USA/MS-MSPHL-0045/2024 | C | 1464 | stop | 16 | 20240104 |
| EPI_ISL_5085301 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-44907/2020 | C | 1464 | insNLL | 1 | 20200727 |
| EPI_ISL_15709553 | NSP3 | hCoV-19/env/USA/CA-SEARCH-91577/2022 | C | 1464 | F | 11 | 20220510 |
| EPI_ISL_5093198 | NSP3 | hCoV-19/USA/MN-CDC-IBX556915046997/2021 | C | 1464 | insK | 1 | 20210928 |
| EPI_ISL_19499821 | NSP3 | hCoV-19/USA/TX-HMH-M-146587/2024 | T | 1465 | S | 99 | 20241006 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | T | 1465 | L | 58 | 20230401 |
| EPI_ISL_1309760 | NSP3 | hCoV-19/England/OXON-F7614F/2021 | T | 1465 | H | 1 | 20210213 |
| EPI_ISL_6721978 | NSP3 | hCoV-19/Chile/LR-UACH-00718/2021 | T | 1465 | insLL | 1 | 20211116 |
| EPI_ISL_4530215 | NSP3 | hCoV-19/England/PHEC-3G075G43/2021 | T | 1465 | K | 2 | 20210919 |
| EPI_ISL_8718063 | NSP3 | hCoV-19/USA/ID-IBL-781558/2022 | T | 1465 | Y | 1 | 20220103 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | T | 1465 | F | 8 | 20240414 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | T | 1465 | C | 2 | 20210817 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | T | 1465 | R | 1 | 20200701 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | T | 1465 | M | 4 | 20211121 |
| EPI_ISL_8803780 | NSP3 | hCoV-19/India/MH-NCCS-2749001808687/2021 | T | 1465 | insLLY | 2 | 20210812 |
| EPI_ISL_11370187 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-45/2022 | T | 1465 | D | 2 | 20220220 |
| EPI_ISL_19081576 | NSP3 | hCoV-19/Russia/MO-RII-MH184553S/2024 | T | 1465 | A | 210 | 20240403 |
| EPI_ISL_19550834 | NSP3 | hCoV-19/USA/CA-SCPHL-24WGS00932/2024 | T | 1465 | V | 65 | 20241027 |
| EPI_ISL_8806464 | NSP3 | hCoV-19/India/MH-NCCS-2749001909933/2021 | T | 1465 | insLLYWFXX | 1 | 20210830 |
| EPI_ISL_19352976 | NSP3 | hCoV-19/USA/HI-H2330524/2024 | T | 1465 | del | 177 | 20240717 |
| EPI_ISL_19640094 | NSP3 | hCoV-19/USA/CA-CDPH-6000021365/2024 | T | 1465 | N | 65 | 20241116 |
| EPI_ISL_14440983 | NSP3 | hCoV-19/India/TN-ICMR-NIRT-INSACOG-W92/2022 | T | 1465 | G | 3 | 20220202 |
| EPI_ISL_12032531 | NSP3 | hCoV-19/USA/KS-KSU-1965/2022 | T | 1465 | insV | 21 | 20220204 |
| EPI_ISL_8804033 | NSP3 | hCoV-19/India/GA-NCCS-211990064/2021 | T | 1465 | insLLYWXXX | 1 | 20210718 |
| EPI_ISL_4440101 | NSP3 | hCoV-19/Ukraine/68-62556/2021 | T | 1465 | W | 1 | 20210614 |
| EPI_ISL_17347104 | NSP3 | hCoV-19/Singapore/R21MR210/2023 | T | 1465 | P | 7 | 20230321 |
| EPI_ISL_19833199 | NSP3 | hCoV-19/Poland/Kce-45/2025 | T | 1465 | I | 176985 | 20250411 |
| EPI_ISL_19563090 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-143574/2024 | G | 1466 | del | 727 | 20241024 |
| EPI_ISL_19807196 | NSP3 | hCoV-19/Canada/ON-KHS-202500700-v1/2025 | G | 1466 | S | 315 | 20250221 |
| EPI_ISL_19780186 | NSP3 | hCoV-19/France/GES-RELAB-IPP03031/2025 | G | 1466 | D | 338 | 20250219 |
| EPI_ISL_1960932 | NSP3 | hCoV-19/USA/LA-EVTL2563/2021 | G | 1466 | I | 2 | 20210406 |
| EPI_ISL_4325655 | NSP3 | hCoV-19/Nigeria/NCDC-NR370/2021 | G | 1466 | insRSEEHT | 1 | 20210908 |
| EPI_ISL_9849479 | NSP3 | hCoV-19/India/MH-RFIP08891/2022 | G | 1466 | insRCYVHGHTIATYCTG | 1 | 20220125 |
| EPI_ISL_19088069 | NSP3 | hCoV-19/England/CLIMB-CM7YGWKK/2024 | G | 1466 | N | 26 | 20240408 |
| EPI_ISL_9682968 | NSP3 | hCoV-19/India/MH-RFIP06127/2021 | G | 1466 | insVNEMKHLL | 1 | 20210211 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | G | 1466 | Y | 6 | 20230401 |
| EPI_ISL_14969296 | NSP3 | hCoV-19/Japan/TKYnat5806/2022 | G | 1466 | A | 10 | 20220812 |
| EPI_ISL_16365848 | NSP3 | hCoV-19/Chile/VS-135638/2022 | G | 1466 | F | 9 | 20221212 |
| EPI_ISL_13520244 | NSP3 | hCoV-19/India/MH-RFIP12296/2022 | G | 1466 | insR | 4 | 20220521 |
| EPI_ISL_6624703 | NSP3 | hCoV-19/USA/CA-CDC-FG-169171/2021 | G | 1466 | insSSRAAPSLR | 2 | 20211110 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | G | 1466 | W | 3 | 20210919 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | G | 1466 | L | 26 | 20230401 |
| EPI_ISL_8718063 | NSP3 | hCoV-19/USA/ID-IBL-781558/2022 | G | 1466 | insFY | 1 | 20220103 |
| EPI_ISL_19133673 | NSP3 | hCoV-19/Brazil/GO-FIOCRUZ-6796/2024 | G | 1466 | C | 37 | 20240327 |
| EPI_ISL_2903257 | NSP3 | hCoV-19/England/OXON-F894E6/2020 | G | 1466 | H | 1 | 20201001 |
| EPI_ISL_19784478 | NSP3 | hCoV-19/Australia/QLD0x015348/2025 | G | 1466 | V | 318 | 20250226 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1466 | Q | 2 | 20220210 |
| EPI_ISL_16272402 | NSP3 | hCoV-19/USA/NY-PRL-221214_00N02/2022 | G | 1466 | insL | 3 | 20221213 |
| EPI_ISL_14047101 | NSP3 | hCoV-19/Denmark/DCGC-552532/2022 | G | 1466 | R | 17 | 20220718 |
| EPI_ISL_2556545 | NSP3 | hCoV-19/India/DL-NCDC-1709321/2021 | G | 1466 | insHQL | 2 | 20210321 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | G | 1466 | stop | 49 | 20220910 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | G | 1466 | E | 3 | 20210520 |
| EPI_ISL_10697707 | NSP3 | hCoV-19/USA/KS-KSU-1399/2022 | G | 1466 | K | 1 | 20220124 |
| EPI_ISL_8049871 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-GSEQ-6630/2021 | G | 1466 | T | 3 | 20211103 |
| EPI_ISL_8882770 | NSP3 | hCoV-19/India/MH-NCCS-2750000361492/2021 | G | 1466 | insLYLVVFVLVVstop | 1 | 20210703 |
| EPI_ISL_12688854 | NSP3 | hCoV-19/France/BFC-HMN-22042220626/2022 | S | 1467 | stop | 2 | 20220419 |
| EPI_ISL_10720733 | NSP3 | hCoV-19/USA/KS-KSU-1337/2022 | S | 1467 | G | 5 | 20220121 |
| EPI_ISL_19013267 | NSP3 | hCoV-19/Japan/PG-596399/2024 | S | 1467 | P | 211 | 20240202 |
| EPI_ISL_11145200 | NSP3 | hCoV-19/USA/MN-UMGC-29792/2021 | S | 1467 | V | 12 | 20211230 |
| EPI_ISL_16334900 | NSP3 | hCoV-19/France/ARA-HCL022207039001/2022 | S | 1467 | C | 50 | 20221211 |
| EPI_ISL_18951439 | NSP3 | hCoV-19/USA/MS-MSPHL-0156/2024 | S | 1467 | T | 302 | 20240213 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | S | 1467 | K | 2 | 20220117 |
| EPI_ISL_18412000 | NSP3 | hCoV-19/Finland/THL-07851/2023 | S | 1467 | Y | 85 | 20231009 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1467 | E | 2 | 20220210 |
| EPI_ISL_18293204 | NSP3 | hCoV-19/South Korea/KDCA263353/2023 | S | 1467 | D | 2 | 20230827 |
| EPI_ISL_4186417 | NSP3 | hCoV-19/USA/NE-CDC-ASC210247352/2021 | S | 1467 | insCNSGGSHGLGLWVLRPQAVCHGAGX | 2 | 20210724 |
| EPI_ISL_19563090 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-143574/2024 | S | 1467 | A | 361 | 20241024 |
| EPI_ISL_8718063 | NSP3 | hCoV-19/USA/ID-IBL-781558/2022 | S | 1467 | H | 3 | 20220103 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | S | 1467 | L | 35 | 20230401 |
| EPI_ISL_19817916 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U820-1/2025 | S | 1467 | F | 11576 | 20250313 |
| EPI_ISL_2460141 | NSP3 | hCoV-19/India/DL-NCDC-1109186/2021 | S | 1467 | insQX | 2 | 20210224 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | S | 1467 | N | 2 | 20230217 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | S | 1467 | I | 17 | 20220910 |
| EPI_ISL_19114549 | NSP3 | hCoV-19/Norway/2565/2024 | S | 1467 | del | 660 | 20240315 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | S | 1467 | R | 4 | 20220210 |
| EPI_ISL_16365848 | NSP3 | hCoV-19/Chile/VS-135638/2022 | S | 1467 | Q | 12 | 20221212 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | S | 1467 | W | 2 | 20210817 |
| EPI_ISL_19526906 | NSP3 | hCoV-19/Japan/FR084-0178/2024 | I | 1468 | L | 341 | 20241016 |
| EPI_ISL_12291379 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1113/2022 | I | 1468 | A | 2 | 20220123 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | I | 1468 | H | 1 | 20220703 |
| EPI_ISL_19722428 | NSP3 | hCoV-19/Denmark/DCGC-691720/2025 | I | 1468 | V | 1225 | 20250120 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | I | 1468 | insQ | 1 | 20211121 |
| EPI_ISL_12036547 | NSP3 | hCoV-19/USA/KS-KSU-1842/2022 | I | 1468 | N | 4 | 20220201 |
| EPI_ISL_10720733 | NSP3 | hCoV-19/USA/KS-KSU-1337/2022 | I | 1468 | C | 2 | 20220121 |
| EPI_ISL_19438844 | NSP3 | hCoV-19/USA/CO-CDPHE-42243135/2024 | I | 1468 | M | 376 | 20240807 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | I | 1468 | del | 222 | 20230529 |
| EPI_ISL_10697708 | NSP3 | hCoV-19/USA/KS-KSU-1402/2022 | I | 1468 | Q | 10 | 20220124 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | I | 1468 | T | 1551 | 20250209 |
| EPI_ISL_2375846 | NSP3 | hCoV-19/Brazil/RS-LMM54273/2021 | I | 1468 | E | 2 | 20210419 |
| EPI_ISL_6361101 | NSP3 | hCoV-19/England/MILK-29DDB75/2021 | I | 1468 | insSQP | 1 | 20211108 |
| EPI_ISL_13147913 | NSP3 | hCoV-19/Paraguay/431101/2022 | I | 1468 | S | 5 | 20220302 |
| EPI_ISL_15165735 | NSP3 | hCoV-19/Australia/NSW-ICPMR-33651/2022 | I | 1468 | K | 20 | 20220911 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | I | 1468 | Y | 20 | 20230401 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | I | 1468 | R | 23 | 20220704 |
| EPI_ISL_15850342 | NSP3 | hCoV-19/Singapore/15065/2022 | I | 1468 | J | 15 | 20221116 |
| EPI_ISL_12754256 | NSP3 | hCoV-19/USA/MS-MSPHL-322/2021 | I | 1468 | insXXXXXX | 1 | 20210323 |
| EPI_ISL_17585745 | NSP3 | hCoV-19/Egypt/ARMY-CU148/2022 | I | 1468 | F | 7 | 20221106 |
| EPI_ISL_6802406 | NSP3 | hCoV-19/England/MILK-2B43DCD/2021 | P | 1469 | C | 1 | 20211120 |
| EPI_ISL_17585745 | NSP3 | hCoV-19/Egypt/ARMY-CU148/2022 | P | 1469 | Y | 57 | 20221106 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | P | 1469 | stop | 25 | 20220910 |
| EPI_ISL_19829622 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022840_01/2025 | P | 1469 | L | 850 | 20250318 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | P | 1469 | insLFELYstop | 2 | 20220704 |
| EPI_ISL_16575560 | NSP3 | hCoV-19/Japan/65691/2022 | P | 1469 | V | 3 | 20220624 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | P | 1469 | insS | 1 | 20210816 |
| EPI_ISL_10720733 | NSP3 | hCoV-19/USA/KS-KSU-1337/2022 | P | 1469 | N | 2 | 20220121 |
| EPI_ISL_19746845 | NSP3 | hCoV-19/USA/SD-SDPHL-3966/2025 | P | 1469 | S | 2516034 | 20250201 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | P | 1469 | del | 196 | 20230529 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | P | 1469 | I | 2 | 20210801 |
| EPI_ISL_15690211 | NSP3 | hCoV-19/Canada/ON-PHL-22-48734/2022 | P | 1469 | insGSRT | 1 | 20221027 |
| EPI_ISL_19522286 | NSP3 | hCoV-19/Taiwan/CDC-F94499/2024 | P | 1469 | H | 300 | 20241028 |
| EPI_ISL_18832478 | NSP3 | hCoV-19/Spain/MD-HGUGM-64224408/2024 | P | 1469 | A | 47 | 20240102 |
| EPI_ISL_11402573 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-14/2022 | P | 1469 | G | 4 | 20220203 |
| EPI_ISL_15330695 | NSP3 | hCoV-19/England/PHEP-YYFASUP/2022 | P | 1469 | insDLG | 1 | 20220927 |
| EPI_ISL_16365848 | NSP3 | hCoV-19/Chile/VS-135638/2022 | P | 1469 | F | 1122 | 20221212 |
| EPI_ISL_12309089 | NSP3 | hCoV-19/Russia/IVA-CRIE-S_7724155735/2022 | P | 1469 | Q | 4 | 20220124 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | P | 1469 | W | 16 | 20230401 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | P | 1469 | R | 9 | 20220704 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | P | 1469 | insYFFTLLLQL | 1 | 20230108 |
| EPI_ISL_16575560 | NSP3 | hCoV-19/Japan/65691/2022 | P | 1469 | insstopILstop | 1 | 20220624 |
| EPI_ISL_18581463 | NSP3 | hCoV-19/USA/NY-URMC-N9S1L333-1/2023 | P | 1469 | T | 409 | 20231107 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | P | 1469 | K | 3 | 20220219 |
| EPI_ISL_10523160 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-9828/2022 | C | 1470 | V | 7 | 20220209 |
| EPI_ISL_13738080 | NSP3 | hCoV-19/India/CH-IMTECH-INSACOG-0621-A224/2022 | C | 1470 | insAA | 1 | 20220613 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | C | 1470 | W | 3 | 20220219 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | C | 1470 | T | 27 | 20230217 |
| EPI_ISL_6721985 | NSP3 | hCoV-19/Chile/LR-UACH-00728/2021 | C | 1470 | A | 3 | 20211113 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | C | 1470 | insL | 2 | 20220104 |
| EPI_ISL_14609170 | NSP3 | hCoV-19/USA/TX-HMH-M-112291/2022 | C | 1470 | L | 13 | 20220812 |
| EPI_ISL_16561304 | NSP3 | hCoV-19/Austria/AGES-1106953/2022 | C | 1470 | G | 4 | 20220815 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | C | 1470 | insV | 1 | 20200729 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | C | 1470 | del | 166 | 20230529 |
| EPI_ISL_19520556 | NSP3 | hCoV-19/USA/NV-SNPHL-2410220112/2024 | C | 1470 | R | 42 | 20241022 |
| EPI_ISL_18226364 | NSP3 | hCoV-19/env/India/MH-FMR_B6-67a/2023 | C | 1470 | F | 30 | 20230502 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | C | 1470 | E | 1 | 20210319 |
| EPI_ISL_18726658 | NSP3 | hCoV-19/France/ARA-HCL023196880501/2023 | C | 1470 | S | 21 | 20231214 |
| EPI_ISL_12584117 | NSP3 | hCoV-19/Turkey/HSGM-G8671/2022 | C | 1470 | stop | 7 | 20220407 |
| EPI_ISL_19481902 | NSP3 | hCoV-19/USA/GA-GPHL-0805/2024 | C | 1470 | Y | 46 | 20240727 |
| EPI_ISL_11370187 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-45/2022 | C | 1470 | P | 4 | 20220220 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | C | 1470 | insLSstopWFRFFRQ | 1 | 20200721 |
| EPI_ISL_19814168 | NSP3 | hCoV-19/Luxembourg/LNS7045302/2025 | S | 1471 | I | 121 | 20250111 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | S | 1471 | D | 3 | 20220219 |
| EPI_ISL_12032543 | NSP3 | hCoV-19/USA/KS-KSU-1717/2022 | S | 1471 | Q | 1 | 20220128 |
| EPI_ISL_19821092 | NSP3 | hCoV-19/USA/CA-LACPHL-AY11208/2025 | S | 1471 | G | 380 | 20250326 |
| EPI_ISL_18166158 | NSP3 | hCoV-19/Sichuan/LZCDC-130-S2/2023 | S | 1471 | R | 33 | 20230729 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | S | 1471 | L | 7 | 20230315 |
| EPI_ISL_1703657 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-266/2021 | S | 1471 | K | 1 | 20210216 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | S | 1471 | stop | 2 | 20220105 |
| EPI_ISL_8803782 | NSP3 | hCoV-19/India/MH-NCCS-55424/2021 | S | 1471 | F | 3 | 20210731 |
| EPI_ISL_18535629 | NSP3 | hCoV-19/South Korea/KDCA272746/2023 | S | 1471 | T | 42 | 20231101 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | S | 1471 | Y | 14 | 20230401 |
| EPI_ISL_19008660 | NSP3 | hCoV-19/env/Germany/BY-LGL-6175670/2024 | S | 1471 | N | 9 | 20240228 |
| EPI_ISL_19096003 | NSP3 | hCoV-19/Singapore/R22MQ176/2024 | S | 1471 | V | 15 | 20240424 |
| EPI_ISL_17585714 | NSP3 | hCoV-19/Egypt/ARMY-CU116/2022 | S | 1471 | insXX | 1 | 20221005 |
| EPI_ISL_18499573 | NSP3 | hCoV-19/France/BFC-IPP26222/2023 | S | 1471 | insAAA | 1 | 20231031 |
| EPI_ISL_9206657 | NSP3 | hCoV-19/USA/UT-UPHL-220119323519/2022 | S | 1471 | insSQ | 1 | 20220110 |
| EPI_ISL_18255149 | NSP3 | hCoV-19/Pakistan/PACP-B13_S09/2023 | S | 1471 | H | 15 | 20230316 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | S | 1471 | del | 171 | 20230529 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | S | 1471 | P | 16 | 20220910 |
| EPI_ISL_19703902 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09918/2025 | S | 1471 | C | 45 | 20250108 |
| EPI_ISL_1500667 | NSP3 | hCoV-19/USA/KS-KSU-2569/2021 | S | 1471 | A | 1 | 20210204 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | S | 1471 | W | 1 | 20210801 |
| EPI_ISL_4530215 | NSP3 | hCoV-19/England/PHEC-3G075G43/2021 | V | 1472 | insC | 1 | 20210919 |
| EPI_ISL_11534526 | NSP3 | hCoV-19/USA/CA-SEARCH-79852/2022 | V | 1472 | insTCF | 1 | 20220124 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | V | 1472 | insstopA | 1 | 20211228 |
| EPI_ISL_19243264 | NSP3 | hCoV-19/Japan/7565054_S7/2024 | V | 1472 | G | 17 | 20240624 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1472 | insTRN | 1 | 20230108 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | V | 1472 | T | 8 | 20230401 |
| EPI_ISL_12291381 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1115/2022 | V | 1472 | P | 1 | 20220118 |
| EPI_ISL_5095421 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688764_CAM_IZSM_COLLI_TIGEM/2021 | V | 1472 | M | 1 | 20210929 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | V | 1472 | R | 1 | 20210628 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1472 | N | 3 | 20220210 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | V | 1472 | insLstop | 14 | 20230401 |
| EPI_ISL_16860896 | NSP3 | hCoV-19/USA/NJ-CDC-LC1000710/2023 | V | 1472 | K | 4 | 20230126 |
| EPI_ISL_753698 | NSP3 | hCoV-19/Indonesia/SN-NIHRD-PME1701/2020 | V | 1472 | insSCSV | 1 | 20200617 |
| EPI_ISL_19763522 | NSP3 | hCoV-19/USA/NV-SNPHL-835051/2025 | V | 1472 | F | 168 | 20250223 |
| EPI_ISL_8882735 | NSP3 | hCoV-19/India/GA-NCCS-C55446/2021 | V | 1472 | insstop | 1 | 20210628 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | V | 1472 | S | 6 | 20230415 |
| EPI_ISL_15292695 | NSP3 | hCoV-19/India/GA-NCCS-564088184/2021 | V | 1472 | C | 1 | 20211105 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | V | 1472 | stop | 28 | 20230401 |
| EPI_ISL_17560593 | NSP3 | hCoV-19/USA/VA-GBW-H20-317-8903/2023 | V | 1472 | L | 24 | 20230417 |
| EPI_ISL_18255149 | NSP3 | hCoV-19/Pakistan/PACP-B13_S09/2023 | V | 1472 | Y | 12 | 20230316 |
| EPI_ISL_3790456 | NSP3 | hCoV-19/Sweden/10037873/2021 | V | 1472 | insLYWFYTLstop | 1 | 20210322 |
| EPI_ISL_9533413 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-336735/2022 | V | 1472 | D | 3 | 20220124 |
| EPI_ISL_19687917 | NSP3 | hCoV-19/Slovenia/IMI-V1-987/2025 | V | 1472 | I | 554 | 20250120 |
| EPI_ISL_19777588 | NSP3 | hCoV-19/USA/AZ-ASPHL-1977/2024 | V | 1472 | A | 209 | 20241220 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | V | 1472 | del | 144 | 20230529 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | C | 1473 | stop | 2 | 20230106 |
| EPI_ISL_11717959 | NSP3 | hCoV-19/Japan/PG-212801/2022 | C | 1473 | G | 7 | 20220221 |
| EPI_ISL_15229524 | NSP3 | hCoV-19/Singapore/12371/2022 | C | 1473 | R | 10 | 20220923 |
| EPI_ISL_19562640 | NSP3 | hCoV-19/Spain/CT-HUVH-EXE312390/2024 | C | 1473 | Y | 40 | 20241114 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | C | 1473 | H | 2 | 20210628 |
| EPI_ISL_18346901 | NSP3 | hCoV-19/Japan/PG-570553/2023 | C | 1473 | S | 62 | 20230823 |
| EPI_ISL_2375846 | NSP3 | hCoV-19/Brazil/RS-LMM54273/2021 | C | 1473 | E | 1 | 20210419 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | C | 1473 | P | 1 | 20210319 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | C | 1473 | T | 4 | 20220219 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | C | 1473 | A | 5 | 20221018 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | C | 1473 | D | 3 | 20230415 |
| EPI_ISL_15292695 | NSP3 | hCoV-19/India/GA-NCCS-564088184/2021 | C | 1473 | insF | 1 | 20211105 |
| EPI_ISL_14174326 | NSP3 | hCoV-19/Wales/PHWC-PKBYMR/2022 | C | 1473 | V | 14 | 20220708 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | C | 1473 | del | 106 | 20230529 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | C | 1473 | L | 29 | 20220910 |
| EPI_ISL_16728008 | NSP3 | hCoV-19/Sweden/38614832XXP/2022 | C | 1473 | W | 8 | 20221222 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | C | 1473 | I | 7 | 20220812 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | C | 1473 | insFGIYSFHstopVF | 1 | 20210817 |
| EPI_ISL_18933939 | NSP3 | hCoV-19/USA/RI-RISHL2400818/2024 | C | 1473 | F | 62 | 20240211 |
| EPI_ISL_13574342 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2569/2022 | L | 1474 | R | 3 | 20220609 |
| EPI_ISL_1167192 | NSP3 | hCoV-19/Egypt/MASRI-C5-020/2020 | L | 1474 | insRHstopNTstopS | 1 | 20200913 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | L | 1474 | del | 112 | 20230529 |
| EPI_ISL_13310981 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2220/2022 | L | 1474 | Y | 3 | 20220530 |
| EPI_ISL_8706747 | NSP3 | hCoV-19/England/NEWC-2FD8E8A/2021 | L | 1474 | E | 1 | 20211223 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 1474 | Q | 1 | 20220812 |
| EPI_ISL_19816171 | NSP3 | hCoV-19/USA/CA-SEARCH-233365/2024 | L | 1474 | P | 5 | 20240422 |
| EPI_ISL_12321856 | NSP3 | hCoV-19/Malaysia/IMR_CV04092/2022 | L | 1474 | C | 8 | 20220327 |
| EPI_ISL_10924502 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11594/2022 | L | 1474 | M | 5 | 20220226 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | L | 1474 | K | 6 | 20230106 |
| EPI_ISL_18255149 | NSP3 | hCoV-19/Pakistan/PACP-B13_S09/2023 | L | 1474 | N | 2 | 20230316 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | L | 1474 | stop | 3 | 20220105 |
| EPI_ISL_1000668 | NSP3 | hCoV-19/Brazil/SP-BT13044/2021 | L | 1474 | S | 1 | 20210123 |
| EPI_ISL_19079681 | NSP3 | hCoV-19/South Korea/KDCA291235/2024 | L | 1474 | V | 22 | 20240325 |
| EPI_ISL_19786241 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12639-P0/2025 | L | 1474 | H | 17 | 20250228 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | L | 1474 | A | 2 | 20220219 |
| EPI_ISL_19819963 | NSP3 | hCoV-19/Canada/ON-KHS-202500817-v1/2025 | L | 1474 | I | 184 | 20250318 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | L | 1474 | T | 1 | 20220210 |
| EPI_ISL_18672981 | NSP3 | hCoV-19/Spain/RI-CIBIR-306654338-Run51/2023 | L | 1474 | J | 6 | 20230927 |
| EPI_ISL_19793775 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-11C-MM00011R/2025 | L | 1474 | F | 28 | 20250311 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | S | 1475 | stop | 22 | 20220910 |
| EPI_ISL_5095421 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688764_CAM_IZSM_COLLI_TIGEM/2021 | S | 1475 | D | 1 | 20210929 |
| EPI_ISL_19539825 | NSP3 | hCoV-19/Denmark/DCGC-690327/2024 | S | 1475 | I | 462 | 20241028 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | S | 1475 | L | 9 | 20230401 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | S | 1475 | del | 112 | 20230529 |
| EPI_ISL_4465090 | NSP3 | hCoV-19/USA/CA-CDC-QDX28360484/2021 | S | 1475 | V | 7 | 20210831 |
| EPI_ISL_19705502 | NSP3 | hCoV-19/USA/MS-MSPHL-0009/2025 | S | 1475 | C | 70 | 20250121 |
| EPI_ISL_18278926 | NSP3 | hCoV-19/Singapore/R57MR58/2023 | S | 1475 | K | 19 | 20230810 |
| EPI_ISL_19623984 | NSP3 | hCoV-19/Japan/FR302-1559/2024 | S | 1475 | N | 306 | 20241108 |
| EPI_ISL_1077253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-22725/2020 | S | 1475 | E | 1 | 20201230 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | S | 1475 | Y | 1 | 20211121 |
| EPI_ISL_10561057 | NSP3 | hCoV-19/Australia/VIC13527/2020 | S | 1475 | insC | 1 | 20200730 |
| EPI_ISL_6250458 | NSP3 | hCoV-19/Chile/LR-UACH-00640/2021 | S | 1475 | A | 1 | 20211106 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | S | 1475 | M | 1 | 20201214 |
| EPI_ISL_1627991 | NSP3 | hCoV-19/Poland/NIPH-NIH_ECDC-2785/2021 | S | 1475 | H | 3 | 20210323 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | S | 1475 | insstop | 1 | 20210114 |
| EPI_ISL_19507698 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293837/2024 | S | 1475 | R | 54 | 20241012 |
| EPI_ISL_3299467 | NSP3 | hCoV-19/Sweden/UUH-000199595175/2021 | S | 1475 | insY | 1 | 20210428 |
| EPI_ISL_11020766 | NSP3 | hCoV-19/France/BRE-IPP13618/2022 | S | 1475 | F | 4 | 20220219 |
| EPI_ISL_19368019 | NSP3 | hCoV-19/USA/CO-CDPHE-42160673/2024 | S | 1475 | G | 2506 | 20240718 |
| EPI_ISL_17350294 | NSP3 | hCoV-19/Canada/SK-RRPL-607942/2023 | S | 1475 | T | 11 | 20230309 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | S | 1475 | insstopWFRFFR | 26 | 20230401 |
| EPI_ISL_15875700 | NSP3 | hCoV-19/Russia/MOW-PMVL-DZ-29266479550/2021 | G | 1476 | insTR | 1 | 20211227 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1476 | Y | 4 | 20220210 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | G | 1476 | T | 7 | 20221018 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1476 | E | 1 | 20210318 |
| EPI_ISL_1167192 | NSP3 | hCoV-19/Egypt/MASRI-C5-020/2020 | G | 1476 | insstop | 1 | 20200913 |
| EPI_ISL_1078960 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-24406/2021 | G | 1476 | insstopILstopTPIL | 1 | 20210116 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | G | 1476 | del | 118 | 20230529 |
| EPI_ISL_5274433 | NSP3 | hCoV-19/England/PHEC-3K048K01/2021 | G | 1476 | insFILstopTPIL | 1 | 20210930 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | G | 1476 | W | 3 | 20230315 |
| EPI_ISL_19824494 | NSP3 | hCoV-19/Japan/FR022-0005/2025 | G | 1476 | C | 133 | 20250108 |
| EPI_ISL_10924502 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11594/2022 | G | 1476 | L | 7 | 20220226 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | G | 1476 | K | 19 | 20220910 |
| EPI_ISL_12658793 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-120821-1264/2021 | G | 1476 | stop | 42 | 20211208 |
| EPI_ISL_17465618 | NSP3 | hCoV-19/USA/CA-CDC-LC1035588/2023 | G | 1476 | R | 1 | 20230330 |
| EPI_ISL_1077253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-22725/2020 | G | 1476 | insY | 1 | 20201230 |
| EPI_ISL_19697627 | NSP3 | hCoV-19/Japan/FR048-0005/2025 | G | 1476 | S | 2567 | 20250121 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | G | 1476 | F | 3 | 20220104 |
| EPI_ISL_19591883 | NSP3 | hCoV-19/Japan/FR021-1078/2024 | G | 1476 | V | 176 | 20241119 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | G | 1476 | H | 28 | 20230401 |
| EPI_ISL_17249974 | NSP3 | hCoV-19/USA/HI-CDC-QDX47594976/2023 | G | 1476 | A | 40 | 20230302 |
| EPI_ISL_12658805 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1285/2022 | G | 1476 | P | 1 | 20220105 |
| EPI_ISL_19640739 | NSP3 | hCoV-19/Canada/NL-NML-757591/2024 | G | 1476 | D | 396 | 20241212 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | L | 1477 | P | 4 | 20210328 |
| EPI_ISL_19373378 | NSP3 | hCoV-19/Mexico/PUE_InDRE_FB953/2024 | L | 1477 | F | 65 | 20240412 |
| EPI_ISL_12320497 | NSP3 | hCoV-19/Turkey/HSGM-GS2198/2022 | L | 1477 | Y | 3 | 20220401 |
| EPI_ISL_17730171 | NSP3 | hCoV-19/India/CT-ILS-GS20499/2023 | L | 1477 | stop | 4 | 20230412 |
| EPI_ISL_17523837 | NSP3 | hCoV-19/USA/TX-HMH-M-127770/2023 | L | 1477 | J | 5 | 20230403 |
| EPI_ISL_19413739 | NSP3 | hCoV-19/Japan/FR021-0825/2024 | L | 1477 | S | 84 | 20240902 |
| EPI_ISL_19330705 | NSP3 | hCoV-19/Japan/7463904_S16/2024 | L | 1477 | V | 51 | 20240722 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | L | 1477 | del | 107 | 20230529 |
| EPI_ISL_12658793 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-120821-1264/2021 | L | 1477 | W | 38 | 20211208 |
| EPI_ISL_19656392 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3067/2024 | L | 1477 | I | 39 | 20240813 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | L | 1477 | M | 1 | 20220210 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 1477 | E | 1 | 20220812 |
| EPI_ISL_13719239 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2600/2022 | D | 1478 | I | 7 | 20220610 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | D | 1478 | T | 1 | 20211228 |
| EPI_ISL_10081740 | NSP3 | hCoV-19/USA/TN-ASC-210577570/2021 | D | 1478 | Q | 4 | 20211231 |
| EPI_ISL_12658793 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-120821-1264/2021 | D | 1478 | F | 39 | 20211208 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1478 | C | 1 | 20210318 |
| EPI_ISL_18256282 | NSP3 | hCoV-19/USA/TX-HMH-M-132346/2023 | D | 1478 | Y | 39 | 20230823 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | D | 1478 | stop | 12 | 20230401 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | D | 1478 | K | 1 | 20221018 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | D | 1478 | N | 14 | 20230315 |
| EPI_ISL_19637195 | NSP3 | hCoV-19/Italy/LOM-UNIBS-11269701/2024 | D | 1478 | A | 3 | 20241113 |
| EPI_ISL_2375846 | NSP3 | hCoV-19/Brazil/RS-LMM54273/2021 | D | 1478 | H | 1 | 20210419 |
| EPI_ISL_1167192 | NSP3 | hCoV-19/Egypt/MASRI-C5-020/2020 | D | 1478 | insstopRTstopANTstopstopstopKPNY | 1 | 20200913 |
| EPI_ISL_16940966 | NSP3 | hCoV-19/Germany/BW-RKI-I-1105587/2023 | D | 1478 | V | 8 | 20230202 |
| EPI_ISL_18832779 | NSP3 | hCoV-19/Finland/THL-00920/2024 | D | 1478 | E | 65 | 20240107 |
| EPI_ISL_18041141 | NSP3 | hCoV-19/Uruguay/DLSP_1088/2023 | D | 1478 | del | 105 | 20230529 |
| EPI_ISL_2903044 | NSP3 | hCoV-19/England/OXON-F87D0B/2021 | D | 1478 | P | 1 | 20210621 |
| EPI_ISL_13574302 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2509/2022 | D | 1478 | R | 7 | 20220608 |
| EPI_ISL_18184439 | NSP3 | hCoV-19/Mexico/GUA_UNAM_01031840/2022 | D | 1478 | B | 8 | 20220816 |
| EPI_ISL_19507698 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293837/2024 | D | 1478 | G | 13 | 20241012 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | D | 1478 | L | 2 | 20220812 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | D | 1478 | S | 32 | 20230401 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | S | 1479 | L | 11 | 20220228 |
| EPI_ISL_12658793 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-120821-1264/2021 | S | 1479 | R | 38 | 20211208 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | S | 1479 | del | 104 | 20240812 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1479 | D | 2 | 20220210 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | S | 1479 | W | 1 | 20210817 |
| EPI_ISL_18439248 | NSP3 | hCoV-19/South Korea/KDCA268819/2023 | S | 1479 | C | 2 | 20230925 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | S | 1479 | N | 5 | 20220131 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | S | 1479 | I | 8 | 20230401 |
| EPI_ISL_18980823 | NSP3 | hCoV-19/USA/TX-HMH-M-139938/2024 | S | 1479 | F | 71 | 20240224 |
| EPI_ISL_18968846 | NSP3 | hCoV-19/Belgium/Sciensano-LS-S2157/2024 | S | 1479 | T | 43 | 20240213 |
| EPI_ISL_19715437 | NSP3 | hCoV-19/Spain/EX-BA_37205946/2025 | S | 1479 | A | 47 | 20250102 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | S | 1479 | H | 3 | 20220104 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | S | 1479 | Y | 161 | 20230217 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | S | 1479 | V | 3 | 20211228 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | S | 1479 | K | 20 | 20220910 |
| EPI_ISL_17349643 | NSP3 | hCoV-19/USA/FL-ASC-210971312/2023 | S | 1479 | P | 8 | 20230318 |
| EPI_ISL_18258746 | NSP3 | hCoV-19/France/IDF-APHPSU_PSL-662306032217/2023 | L | 1480 | V | 27 | 20230612 |
| EPI_ISL_5095421 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688764_CAM_IZSM_COLLI_TIGEM/2021 | L | 1480 | C | 1 | 20210929 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | L | 1480 | T | 1 | 20230217 |
| EPI_ISL_19507698 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17293837/2024 | L | 1480 | F | 81 | 20241012 |
| EPI_ISL_15643696 | NSP3 | hCoV-19/Germany/BW-RKI-I-1016472/2022 | L | 1480 | I | 59 | 20221017 |
| EPI_ISL_11064663 | NSP3 | hCoV-19/France/OCC-CHU-TLS-2205212450/2022 | L | 1480 | A | 9 | 20220221 |
| EPI_ISL_19201865 | NSP3 | hCoV-19/Spain/PV-HUB-56161375/2024 | L | 1480 | S | 124 | 20240607 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | L | 1480 | R | 2 | 20211228 |
| EPI_ISL_8882802 | NSP3 | hCoV-19/India/GA-NCCS-VH74938/2021 | L | 1480 | insA | 1 | 20210614 |
| EPI_ISL_19426619 | NSP3 | hCoV-19/Italy/EMR-IZSLER-240677-003-01/2024 | L | 1480 | J | 6 | 20240725 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1480 | M | 1 | 20201214 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 1480 | P | 2 | 20220812 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | L | 1480 | del | 97 | 20240812 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | L | 1480 | Y | 2 | 20230315 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | L | 1480 | K | 1 | 20211015 |
| EPI_ISL_19330705 | NSP3 | hCoV-19/Japan/7463904_S16/2024 | L | 1480 | stop | 7 | 20240722 |
| EPI_ISL_19468449 | NSP3 | hCoV-19/USA/MN-MDH-43266/2024 | D | 1481 | G | 256 | 20240804 |
| EPI_ISL_18779621 | NSP3 | hCoV-19/USA/FL-CDC-LC1080130/2023 | D | 1481 | B | 25 | 20231226 |
| EPI_ISL_19757266 | NSP3 | hCoV-19/Australia/QLD-PHV-FSS-151F6/2025 | D | 1481 | N | 1008 | 20250129 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | D | 1481 | stop | 14 | 20230401 |
| EPI_ISL_19826413 | NSP3 | hCoV-19/Canada/ON-SHL-202501483/2025 | D | 1481 | E | 2025 | 20250328 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | D | 1481 | R | 34 | 20230401 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | D | 1481 | I | 3 | 20220131 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | D | 1481 | V | 7 | 20221018 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | D | 1481 | L | 3 | 20211121 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | D | 1481 | C | 1 | 20230315 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | D | 1481 | P | 11 | 20220812 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1481 | K | 2 | 20220210 |
| EPI_ISL_12658793 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-120821-1264/2021 | D | 1481 | F | 39 | 20211208 |
| EPI_ISL_19775311 | NSP3 | hCoV-19/Germany/BE-RKI-I-1147856/2025 | D | 1481 | Y | 495 | 20250213 |
| EPI_ISL_2833823 | NSP3 | hCoV-19/Kuwait/KCCC-95954-3431518/2021 | D | 1481 | T | 1 | 20210628 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | D | 1481 | S | 4 | 20230217 |
| EPI_ISL_19222386 | NSP3 | hCoV-19/Ireland/CO-CUH-SC0265/2024 | D | 1481 | A | 30 | 20240622 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | D | 1481 | del | 111 | 20240812 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1481 | M | 1 | 20210318 |
| EPI_ISL_19464572 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55179/2024 | D | 1481 | H | 184 | 20240916 |
| EPI_ISL_13018793 | NSP3 | hCoV-19/Portugal/PT35683/2022 | D | 1481 | Q | 2 | 20220516 |
| EPI_ISL_2382994 | NSP3 | hCoV-19/India/MH-NCCS-2748000333696/2021 | T | 1482 | H | 2 | 20210409 |
| EPI_ISL_3756896 | NSP3 | hCoV-19/USA/ID-IBL-746949/2021 | T | 1482 | L | 3 | 20210806 |
| EPI_ISL_5095421 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688764_CAM_IZSM_COLLI_TIGEM/2021 | T | 1482 | C | 2 | 20210929 |
| EPI_ISL_3242922 | NSP3 | hCoV-19/USA/ID-IBL-640883/2020 | T | 1482 | insP | 1 | 20200809 |
| EPI_ISL_7547075 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101121-1040/2021 | T | 1482 | insstopKLYKLP | 1 | 20211011 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | T | 1482 | V | 2 | 20211121 |
| EPI_ISL_5463112 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688972/2021 | T | 1482 | D | 1 | 20211008 |
| EPI_ISL_12658793 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-120821-1264/2021 | T | 1482 | R | 39 | 20211208 |
| EPI_ISL_19820178 | NSP3 | hCoV-19/USA/NY-PRL-250401_81G11/2025 | T | 1482 | I | 10704 | 20250319 |
| EPI_ISL_17692349 | NSP3 | hCoV-19/Italy/LOM-69371810/2023 | T | 1482 | S | 12 | 20230517 |
| EPI_ISL_8693624 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG1594/2021 | T | 1482 | Y | 1 | 20211020 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | T | 1482 | G | 2 | 20211228 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | T | 1482 | K | 3 | 20211011 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | T | 1482 | del | 110 | 20240812 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | T | 1482 | P | 9 | 20220910 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | T | 1482 | W | 5 | 20220228 |
| EPI_ISL_1167192 | NSP3 | hCoV-19/Egypt/MASRI-C5-020/2020 | T | 1482 | Q | 1 | 20200913 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | T | 1482 | stop | 1 | 20210815 |
| EPI_ISL_19674345 | NSP3 | hCoV-19/Australia/SA2300136/2024 | T | 1482 | N | 418 | 20241231 |
| EPI_ISL_19666641 | NSP3 | hCoV-19/Singapore/R63MQ76/2024 | T | 1482 | A | 645 | 20241115 |
| EPI_ISL_17585742 | NSP3 | hCoV-19/Egypt/ARMY-CU145/2022 | T | 1482 | insXXXX | 1 | 20220913 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | T | 1482 | F | 7 | 20220104 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | Y | 1483 | V | 2 | 20211121 |
| EPI_ISL_12771890 | NSP3 | hCoV-19/Russia/KIR-CRIE-7726742211/2022 | Y | 1483 | K | 3 | 20220202 |
| EPI_ISL_14193235 | NSP3 | hCoV-19/Italy/SIC-CQRC-3422051636-22/2022 | Y | 1483 | C | 7 | 20220714 |
| EPI_ISL_10778268 | NSP3 | hCoV-19/USA/AZ-TG1254154/2022 | Y | 1483 | N | 6 | 20220210 |
| EPI_ISL_1249143 | NSP3 | hCoV-19/England/OXON-F6DE44/2021 | Y | 1483 | T | 1 | 20210210 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | Y | 1483 | F | 34 | 20230315 |
| EPI_ISL_5511695 | NSP3 | hCoV-19/USA/ID-IBL-758631/2021 | Y | 1483 | I | 4 | 20210915 |
| EPI_ISL_10436702 | NSP3 | hCoV-19/India/OR-ILSGS15335/2022 | Y | 1483 | H | 47 | 20220206 |
| EPI_ISL_10082630 | NSP3 | hCoV-19/USA/ID-IBL-789866/2022 | Y | 1483 | L | 5 | 20220127 |
| EPI_ISL_19243264 | NSP3 | hCoV-19/Japan/7565054_S7/2024 | Y | 1483 | D | 5 | 20240624 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | Y | 1483 | G | 1 | 20201214 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | Y | 1483 | del | 103 | 20240812 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | Y | 1483 | W | 1 | 20220131 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | Y | 1483 | P | 4 | 20210917 |
| EPI_ISL_5854760 | NSP3 | hCoV-19/Nigeria/MRL-OS-2079/2021 | Y | 1483 | S | 16 | 20210630 |
| EPI_ISL_3756896 | NSP3 | hCoV-19/USA/ID-IBL-746949/2021 | Y | 1483 | insVstopILstopT | 1 | 20210806 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | Y | 1483 | E | 1 | 20211228 |
| EPI_ISL_14718232 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19515/2022 | Y | 1483 | stop | 3 | 20220805 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | P | 1484 | Y | 6 | 20220228 |
| EPI_ISL_5274433 | NSP3 | hCoV-19/England/PHEC-3K048K01/2021 | P | 1484 | insFH | 2 | 20210930 |
| EPI_ISL_12955191 | NSP3 | hCoV-19/Russia/KIR-CRIE-7729064471/2022 | P | 1484 | R | 31 | 20220209 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | P | 1484 | stop | 1 | 20211121 |
| EPI_ISL_17709635 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000167744SP/2022 | P | 1484 | I | 7 | 20220616 |
| EPI_ISL_12529742 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-Vijaya-68228718/2022 | P | 1484 | Q | 1 | 20220416 |
| EPI_ISL_19817943 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U848-1/2025 | P | 1484 | S | 1063 | 20250314 |
| EPI_ISL_12753112 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726728054/2022 | P | 1484 | N | 2 | 20220204 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | P | 1484 | F | 3 | 20220131 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | P | 1484 | C | 1 | 20210319 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | P | 1484 | K | 1 | 20211228 |
| EPI_ISL_18114358 | NSP3 | hCoV-19/Spain/GA-SCQ-168290_2/2023 | P | 1484 | T | 44 | 20230420 |
| EPI_ISL_18114393 | NSP3 | hCoV-19/USA/OH-ODH-SC3031737/2023 | P | 1484 | H | 22 | 20230702 |
| EPI_ISL_19767076 | NSP3 | hCoV-19/Gansu/PLCDC-0011/2025 | P | 1484 | L | 285 | 20250301 |
| EPI_ISL_1249143 | NSP3 | hCoV-19/England/OXON-F6DE44/2021 | P | 1484 | E | 1 | 20210210 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | P | 1484 | V | 1 | 20220104 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | P | 1484 | del | 103 | 20240812 |
| EPI_ISL_19541393 | NSP3 | hCoV-19/Italy/LAZ-UCBM-2024-5/2024 | P | 1484 | A | 3 | 20241010 |
| EPI_ISL_5054148 | NSP3 | hCoV-19/Senegal/cTE BM 0259/2020 | P | 1484 | insstopSF | 1 | 20200626 |
| EPI_ISL_18255177 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-25/2023 | S | 1485 | N | 39 | 20230411 |
| EPI_ISL_19827111 | NSP3 | hCoV-19/Chile/ML-ISPC-26304/2025 | S | 1485 | F | 5319 | 20250326 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | S | 1485 | L | 28 | 20220910 |
| EPI_ISL_19201362 | NSP3 | hCoV-19/Spain/PV-HUB-41430683/2024 | S | 1485 | Y | 128 | 20240513 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | S | 1485 | I | 7 | 20230401 |
| EPI_ISL_3790633 | NSP3 | hCoV-19/Sweden/10038346/2021 | S | 1485 | insF | 3 | 20210323 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | S | 1485 | del | 101 | 20240812 |
| EPI_ISL_18790278 | NSP3 | hCoV-19/France/ARA-HCL023201743601/2023 | S | 1485 | P | 13 | 20231221 |
| EPI_ISL_19445679 | NSP3 | hCoV-19/USA/NY-CDC-LC1121245/2024 | S | 1485 | A | 243 | 20240909 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | S | 1485 | insYHFIF | 1 | 20210813 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | S | 1485 | R | 2 | 20230217 |
| EPI_ISL_7637663 | NSP3 | hCoV-19/Greece/311925/2021 | S | 1485 | H | 2 | 20211116 |
| EPI_ISL_12291339 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1071/2022 | S | 1485 | K | 4 | 20220126 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1485 | E | 4 | 20220210 |
| EPI_ISL_18603933 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-26K-MM00038R/2023 | S | 1485 | C | 25 | 20231126 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | S | 1485 | T | 10 | 20220228 |
| EPI_ISL_12801393 | NSP3 | hCoV-19/USA/NC-WFSM-1085-4148/2022 | S | 1485 | stop | 1 | 20220505 |
| EPI_ISL_14718232 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19515/2022 | S | 1485 | D | 1 | 20220805 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | S | 1485 | Q | 1 | 20211015 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | S | 1485 | V | 1 | 20210319 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | L | 1486 | insLstop | 4 | 20210915 |
| EPI_ISL_14298967 | NSP3 | hCoV-19/Turkey/HSGM-IST-03859/2022 | L | 1486 | A | 3 | 20220705 |
| EPI_ISL_18972128 | NSP3 | hCoV-19/USA/UT-UPHL-240307187193/2024 | L | 1486 | S | 49 | 20240302 |
| EPI_ISL_16553484 | NSP3 | hCoV-19/USA/ID-IBL-871632/2022 | L | 1486 | V | 14 | 20221228 |
| EPI_ISL_17547773 | NSP3 | hCoV-19/Belgium/UGent-877/2023 | L | 1486 | I | 14 | 20230327 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1486 | T | 3 | 20220210 |
| EPI_ISL_8693619 | NSP3 | hCoV-19/India/MH-KasturbaMCGM-ICMR-INSACOG-WG1589/2021 | L | 1486 | W | 1 | 20211017 |
| EPI_ISL_918021 | NSP3 | hCoV-19/Scotland/QEUH-109C0D9/2021 | L | 1486 | J | 1 | 20210118 |
| EPI_ISL_12658793 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-120821-1264/2021 | L | 1486 | insF | 34 | 20211208 |
| EPI_ISL_3360889 | NSP3 | hCoV-19/England/QEUH-1A72619/2021 | L | 1486 | K | 1 | 20210728 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | L | 1486 | D | 2 | 20230217 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | L | 1486 | insstop | 1 | 20220120 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | L | 1486 | insG | 1 | 20210806 |
| EPI_ISL_8221860 | NSP3 | hCoV-19/Germany/SH-RKI-I-389926/2021 | L | 1486 | insTLVK | 1 | 20211207 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1486 | E | 1 | 20210318 |
| EPI_ISL_18451965 | NSP3 | hCoV-19/USA/NJ-GBW-H20-346-6819/2023 | L | 1486 | stop | 5 | 20231020 |
| EPI_ISL_5324097 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00362273_CAM_IZSM_COLLI_TIGEM/2021 | L | 1486 | insXAH | 1 | 20210918 |
| EPI_ISL_17062645 | NSP3 | hCoV-19/Thailand/NIC_CMI_520/2023 | L | 1486 | F | 53 | 20230110 |
| EPI_ISL_8706747 | NSP3 | hCoV-19/England/NEWC-2FD8E8A/2021 | L | 1486 | M | 2 | 20211223 |
| EPI_ISL_18255177 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-25/2023 | L | 1486 | Y | 35 | 20230411 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | L | 1486 | del | 91 | 20240812 |
| EPI_ISL_6938276 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-101220-799/2020 | L | 1486 | R | 2 | 20201012 |
| EPI_ISL_3078866 | NSP3 | hCoV-19/England/OXON-FA1415/2021 | L | 1486 | G | 1 | 20210709 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | E | 1487 | stop | 25 | 20221018 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | E | 1487 | insF | 1 | 20211011 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | E | 1487 | del | 97 | 20240812 |
| EPI_ISL_18762576 | NSP3 | hCoV-19/Netherlands/FR-RIVM-136137/2023 | E | 1487 | A | 41 | 20231228 |
| EPI_ISL_19340890 | NSP3 | hCoV-19/Japan/FR046-0165/2024 | E | 1487 | R | 32 | 20240722 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | E | 1487 | F | 1 | 20220210 |
| EPI_ISL_19715322 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGUBA/2025 | E | 1487 | K | 219 | 20250108 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | E | 1487 | L | 9 | 20230401 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | E | 1487 | T | 1 | 20201214 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1487 | C | 2 | 20220210 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | E | 1487 | N | 24 | 20220910 |
| EPI_ISL_18311950 | NSP3 | hCoV-19/Canada/AB-ABPHL-101789/2023 | E | 1487 | G | 26 | 20230910 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | E | 1487 | Y | 2 | 20210806 |
| EPI_ISL_19340810 | NSP3 | hCoV-19/South Korea/KDCA294072/2024 | E | 1487 | V | 18 | 20240722 |
| EPI_ISL_8706747 | NSP3 | hCoV-19/England/NEWC-2FD8E8A/2021 | E | 1487 | S | 2 | 20211223 |
| EPI_ISL_17977850 | NSP3 | hCoV-19/Canada/ON-PHL-23-26604/2023 | E | 1487 | Z | 10 | 20230705 |
| EPI_ISL_17512477 | NSP3 | hCoV-19/Norway/1612/2023 | E | 1487 | D | 25 | 20230124 |
| EPI_ISL_18255177 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-25/2023 | E | 1487 | H | 35 | 20230411 |
| EPI_ISL_19627644 | NSP3 | hCoV-19/Slovenia/1002253/2024 | E | 1487 | Q | 55 | 20241009 |
| EPI_ISL_17105739 | NSP3 | hCoV-19/Germany/BY-LGL-5794367/2023 | T | 1488 | L | 23 | 20230123 |
| EPI_ISL_9911825 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344002/2022 | T | 1488 | D | 1 | 20220206 |
| EPI_ISL_17585723 | NSP3 | hCoV-19/Egypt/ARMY-CU125/2022 | T | 1488 | insXX | 1 | 20221014 |
| EPI_ISL_19736266 | NSP3 | hCoV-19/France/un-HMN-035-0014-G-E/2024 | T | 1488 | A | 61 | 20240211 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | T | 1488 | F | 33 | 20230401 |
| EPI_ISL_9770053 | NSP3 | hCoV-19/USA/AZ-TG1216171/2021 | T | 1488 | Y | 2 | 20211227 |
| EPI_ISL_11935516 | NSP3 | hCoV-19/England/DHSC-CYDA4R6/2022 | T | 1488 | insTRTN | 1 | 20220102 |
| EPI_ISL_17994376 | NSP3 | hCoV-19/Japan/PG-544983/2023 | T | 1488 | S | 14 | 20230627 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | T | 1488 | G | 18 | 20220910 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | T | 1488 | R | 3 | 20221018 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | T | 1488 | C | 6 | 20230407 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | T | 1488 | stop | 4 | 20230401 |
| EPI_ISL_19782972 | NSP3 | hCoV-19/Canada/BC-BCCDC-768882/2025 | T | 1488 | I | 1230 | 20250218 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | T | 1488 | H | 2 | 20210805 |
| EPI_ISL_12999237 | NSP3 | hCoV-19/Russia/LIP-CRIE-7730694259/2022 | T | 1488 | P | 3 | 20220215 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | T | 1488 | del | 96 | 20240812 |
| EPI_ISL_18535391 | NSP3 | hCoV-19/Liaoning/LNCDC-426-1/2023 | T | 1488 | N | 418 | 20231026 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | T | 1488 | K | 4 | 20210917 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1488 | V | 4 | 20220210 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | I | 1489 | L | 63 | 20230217 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | I | 1489 | P | 1 | 20211121 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | I | 1489 | S | 3 | 20220812 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1489 | H | 1 | 20210318 |
| EPI_ISL_19077268 | NSP3 | hCoV-19/USA/WI-WSLH-2400846/2024 | I | 1489 | V | 156 | 20240219 |
| EPI_ISL_19620688 | NSP3 | hCoV-19/Canada/ON-PHL-202424402/2024 | I | 1489 | M | 190 | 20241208 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | I | 1489 | N | 1 | 20220104 |
| EPI_ISL_17105739 | NSP3 | hCoV-19/Germany/BY-LGL-5794367/2023 | I | 1489 | Y | 27 | 20230123 |
| EPI_ISL_19799751 | NSP3 | hCoV-19/USA/TX-HMH-M-147415/2025 | I | 1489 | T | 1043 | 20250130 |
| EPI_ISL_14611175 | NSP3 | hCoV-19/Chile/AT-99245/2022 | I | 1489 | F | 1 | 20220809 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | I | 1489 | del | 93 | 20240812 |
| EPI_ISL_8803782 | NSP3 | hCoV-19/India/MH-NCCS-55424/2021 | I | 1489 | stop | 1 | 20210731 |
| EPI_ISL_12394260 | NSP3 | hCoV-19/Canada/UN-322931/2022 | I | 1489 | A | 1 | 20220113 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | I | 1489 | insLK | 1 | 20210917 |
| EPI_ISL_19232241 | NSP3 | hCoV-19/Spain/VC-VAHNSI-09_1060/2024 | I | 1489 | R | 295 | 20240410 |
| EPI_ISL_19623503 | NSP3 | hCoV-19/USA/AZ-ASPHL-1950/2024 | I | 1489 | K | 190 | 20241203 |
| EPI_ISL_18458982 | NSP3 | hCoV-19/USA/TX-TAMGHRC-UTHBCS_02908/2023 | I | 1489 | J | 19 | 20230914 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | Q | 1490 | C | 1 | 20230407 |
| EPI_ISL_5463112 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688972/2021 | Q | 1490 | V | 1 | 20211008 |
| EPI_ISL_5804091 | NSP3 | hCoV-19/Denmark/DCGC-193158/2021 | Q | 1490 | Z | 2 | 20211023 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Q | 1490 | T | 6 | 20230108 |
| EPI_ISL_17407380 | NSP3 | hCoV-19/Germany/NW-RKI-I-1128801/2023 | Q | 1490 | K | 37 | 20230325 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | Q | 1490 | S | 8 | 20220228 |
| EPI_ISL_14611175 | NSP3 | hCoV-19/Chile/AT-99245/2022 | Q | 1490 | A | 3 | 20220809 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | Q | 1490 | H | 16 | 20221018 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | Q | 1490 | insstop | 1 | 20210801 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | Q | 1490 | I | 2 | 20211121 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | Q | 1490 | del | 120 | 20240812 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | Q | 1490 | F | 1 | 20200807 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | Q | 1490 | N | 7 | 20220203 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1490 | G | 2 | 20220210 |
| EPI_ISL_16818706 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS_89396/2023 | Q | 1490 | stop | 35 | 20230119 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | Q | 1490 | Y | 6 | 20230217 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | Q | 1490 | D | 1 | 20210801 |
| EPI_ISL_14298908 | NSP3 | hCoV-19/Turkey/HSGM-IST-03660/2022 | Q | 1490 | P | 4 | 20220702 |
| EPI_ISL_11227829 | NSP3 | hCoV-19/France/IDF-SLS-762111027571/2021 | Q | 1490 | E | 2 | 20211108 |
| EPI_ISL_19340810 | NSP3 | hCoV-19/South Korea/KDCA294072/2024 | Q | 1490 | L | 9 | 20240722 |
| EPI_ISL_10753224 | NSP3 | hCoV-19/India/KA-SEQ_13681_S160_R1_001/2022 | Q | 1490 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20220205 |
| EPI_ISL_17275295 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45820/2023 | Q | 1490 | R | 7 | 20230217 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | I | 1491 | H | 2 | 20220104 |
| EPI_ISL_8906183 | NSP3 | hCoV-19/Canada/BC-BCCDC-305437/2021 | I | 1491 | S | 4 | 20211211 |
| EPI_ISL_8706747 | NSP3 | hCoV-19/England/NEWC-2FD8E8A/2021 | I | 1491 | P | 2 | 20211223 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | I | 1491 | del | 119 | 20240812 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | I | 1491 | stop | 6 | 20220228 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | I | 1491 | C | 2 | 20220812 |
| EPI_ISL_19050550 | NSP3 | hCoV-19/Wales/CLIMB-CM7YRWYY/2024 | I | 1491 | F | 6 | 20240327 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | I | 1491 | M | 4 | 20211228 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | I | 1491 | Y | 8 | 20230401 |
| EPI_ISL_19743952 | NSP3 | hCoV-19/Liaoning/LNCDC-007-5/2025 | I | 1491 | V | 2313 | 20250109 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1491 | D | 1 | 20220210 |
| EPI_ISL_19617931 | NSP3 | hCoV-19/USA/WI-WSLH-2403083/2024 | I | 1491 | T | 39 | 20241113 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | I | 1491 | G | 1 | 20210319 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 1491 | N | 19 | 20230108 |
| EPI_ISL_12260824 | NSP3 | hCoV-19/France/CVL-HMN-22032290818/2022 | I | 1491 | J | 3 | 20220117 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | I | 1491 | R | 1 | 20210917 |
| EPI_ISL_17279634 | NSP3 | hCoV-19/USA/CA-ASC-210886653/2023 | I | 1491 | L | 75 | 20230314 |
| EPI_ISL_14856683 | NSP3 | hCoV-19/Japan/TKYmbc2546/2022 | T | 1492 | insXXX | 1 | 20220708 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1492 | Y | 11 | 20230108 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | T | 1492 | del | 116 | 20240812 |
| EPI_ISL_15258146 | NSP3 | hCoV-19/USA/NC-MCPH-CLT-012357/2022 | T | 1492 | A | 30 | 20220922 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | T | 1492 | Q | 2 | 20220210 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | T | 1492 | W | 5 | 20220228 |
| EPI_ISL_19753183 | NSP3 | hCoV-19/USA/CA-PFZ04332/2025 | T | 1492 | I | 1447 | 20250204 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1492 | M | 2 | 20210318 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | T | 1492 | insFHLLNGIstopLLLAstop | 3 | 20210310 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | T | 1492 | V | 5 | 20230217 |
| EPI_ISL_15280311 | NSP3 | hCoV-19/Japan/PG-359503/2022 | T | 1492 | H | 4 | 20220906 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | T | 1492 | K | 1 | 20230401 |
| EPI_ISL_18725218 | NSP3 | hCoV-19/Australia/NSW-ICPMR-52158/2023 | T | 1492 | N | 94 | 20231207 |
| EPI_ISL_5324097 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00362273_CAM_IZSM_COLLI_TIGEM/2021 | T | 1492 | R | 1 | 20210918 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | T | 1492 | F | 3 | 20220104 |
| EPI_ISL_12753380 | NSP3 | hCoV-19/Russia/LIP-CRIE-7728245938/2022 | T | 1492 | P | 11 | 20220207 |
| EPI_ISL_19349074 | NSP3 | hCoV-19/USA/TX-HMH-M-143784/2024 | T | 1492 | S | 15 | 20240728 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | T | 1492 | L | 22 | 20220910 |
| EPI_ISL_15422014 | NSP3 | hCoV-19/India/MH-RFIP15165/2022 | I | 1493 | insstopGTTLPKGFY | 1 | 20220830 |
| EPI_ISL_19550329 | NSP3 | hCoV-19/Sichuan/GYCDC-CX493/2024 | I | 1493 | L | 63 | 20240817 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | I | 1493 | F | 23 | 20230407 |
| EPI_ISL_12771890 | NSP3 | hCoV-19/Russia/KIR-CRIE-7726742211/2022 | I | 1493 | N | 15 | 20220202 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | I | 1493 | R | 1 | 20210805 |
| EPI_ISL_19542144 | NSP3 | hCoV-19/Russia/TYU-RII-MH206764S/2024 | I | 1493 | V | 461 | 20241022 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | I | 1493 | C | 2 | 20230217 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 1493 | H | 12 | 20230108 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1493 | K | 3 | 20220210 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | I | 1493 | stop | 1 | 20211121 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | I | 1493 | del | 110 | 20240812 |
| EPI_ISL_10050052 | NSP3 | hCoV-19/USA/NY-CDCBI-CRSP_FTZPRUP7XWPW6H7D/2022 | I | 1493 | T | 5 | 20220207 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1493 | E | 1 | 20210318 |
| EPI_ISL_19793775 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-11C-MM00011R/2025 | I | 1493 | M | 9 | 20250311 |
| EPI_ISL_16829092 | NSP3 | hCoV-19/Italy/LOM-ASST-69283205/2023 | I | 1493 | S | 7 | 20230130 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | I | 1493 | P | 1 | 20211011 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | I | 1493 | insLQP | 1 | 20211228 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | I | 1493 | G | 2 | 20201214 |
| EPI_ISL_16669253 | NSP3 | hCoV-19/Switzerland/VD-CHUV-GEN14914/2023 | I | 1493 | insS | 9 | 20230106 |
| EPI_ISL_11893344 | NSP3 | hCoV-19/USA/ND-NDDH-13985/2022 | I | 1493 | J | 2 | 20220126 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | S | 1494 | insstopLQ | 6 | 20220812 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | S | 1494 | E | 1 | 20201102 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | S | 1494 | del | 106 | 20240812 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | S | 1494 | N | 8 | 20220704 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | S | 1494 | K | 2 | 20211121 |
| EPI_ISL_8264759 | NSP3 | hCoV-19/USA/OH-CDC-ASC210633636/2021 | S | 1494 | insP | 1 | 20211217 |
| EPI_ISL_14313292 | NSP3 | hCoV-19/USA/TX-HMH-M-110168/2022 | S | 1494 | F | 15 | 20220729 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1494 | Y | 5 | 20220210 |
| EPI_ISL_19821971 | NSP3 | hCoV-19/USA/NY-CDC-LC1136325/2025 | S | 1494 | L | 1655 | 20250328 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | S | 1494 | C | 2 | 20220812 |
| EPI_ISL_9700098 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS.22.01380/2022 | S | 1494 | V | 1 | 20220118 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | S | 1494 | H | 8 | 20220120 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | S | 1494 | Q | 4 | 20210716 |
| EPI_ISL_1396798 | NSP3 | hCoV-19/France/IDF-HMN-21032110112/2021 | S | 1494 | W | 1 | 20210311 |
| EPI_ISL_19820059 | NSP3 | hCoV-19/Canada/ON-PHL-202504998/2025 | S | 1494 | A | 98 | 20250323 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | S | 1494 | R | 9 | 20230217 |
| EPI_ISL_19800141 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-GSB-1812-9363/2025 | S | 1494 | T | 14 | 20250227 |
| EPI_ISL_19447229 | NSP3 | hCoV-19/USA/NY-SUNYQB-XL2755/2024 | S | 1494 | P | 40 | 20240920 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | S | 1494 | G | 3 | 20220131 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | S | 1494 | stop | 7 | 20221018 |
| EPI_ISL_15280311 | NSP3 | hCoV-19/Japan/PG-359503/2022 | S | 1494 | I | 4 | 20220906 |
| EPI_ISL_16395660 | NSP3 | hCoV-19/Israel/ICH-741194732/2022 | S | 1495 | insS | 2 | 20221221 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | S | 1495 | W | 6 | 20210817 |
| EPI_ISL_15388687 | NSP3 | hCoV-19/Morocco/FMP418/2022 | S | 1495 | N | 11 | 20220118 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | S | 1495 | stop | 13 | 20220910 |
| EPI_ISL_14313292 | NSP3 | hCoV-19/USA/TX-HMH-M-110168/2022 | S | 1495 | I | 16 | 20220729 |
| EPI_ISL_19685996 | NSP3 | hCoV-19/Spain/MC-HCUVA-81234886/2024 | S | 1495 | F | 1191 | 20241211 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | S | 1495 | V | 3 | 20211228 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | S | 1495 | L | 20 | 20230217 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | S | 1495 | del | 105 | 20240812 |
| EPI_ISL_13246371 | NSP3 | hCoV-19/Germany/RP-RKI-I-851403/2022 | S | 1495 | C | 26 | 20220528 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | S | 1495 | G | 3 | 20230217 |
| EPI_ISL_2903213 | NSP3 | hCoV-19/England/OXON-F88EAD/2020 | S | 1495 | E | 1 | 20201128 |
| EPI_ISL_19063948 | NSP3 | hCoV-19/Canada/ON-PHL-202407149/2024 | S | 1495 | Y | 39 | 20240416 |
| EPI_ISL_19831372 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56871/2025 | S | 1495 | P | 644 | 20250310 |
| EPI_ISL_18257631 | NSP3 | hCoV-19/Thailand/NIC_LPG_7780/2023 | S | 1495 | T | 15 | 20230814 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | S | 1495 | K | 1 | 20210716 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | S | 1495 | H | 3 | 20210812 |
| EPI_ISL_19827129 | NSP3 | hCoV-19/Chile/CO-ISPC-27041/2025 | S | 1495 | A | 184 | 20250330 |
| EPI_ISL_18773522 | NSP3 | hCoV-19/Brazil/RJ-LNN11816/2023 | F | 1496 | I | 4 | 20230928 |
| EPI_ISL_18879879 | NSP3 | hCoV-19/Indonesia/JK-BIOKES-W00263/2024 | F | 1496 | Y | 9 | 20240116 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | F | 1496 | A | 2 | 20220811 |
| EPI_ISL_18487406 | NSP3 | hCoV-19/Russia/SPE-RII-MH146961S/2023 | F | 1496 | C | 8 | 20231015 |
| EPI_ISL_18856297 | NSP3 | hCoV-19/USA/NC-1085-10550/2024 | F | 1496 | S | 37 | 20240122 |
| EPI_ISL_19589223 | NSP3 | hCoV-19/USA/NE-NM-L383166209/2024 | F | 1496 | L | 312 | 20241114 |
| EPI_ISL_5463112 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688972/2021 | F | 1496 | K | 1 | 20211008 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | F | 1496 | H | 2 | 20230401 |
| EPI_ISL_12061146 | NSP3 | hCoV-19/USA/UT-UPHL-220414187537/2022 | F | 1496 | insLPAADLDDFS | 1 | 20220127 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | F | 1496 | del | 88 | 20240812 |
| EPI_ISL_19003959 | NSP3 | hCoV-19/USA/CO-CDPHE-41756765/2024 | F | 1496 | V | 19 | 20240301 |
| EPI_ISL_5411335 | NSP3 | hCoV-19/Pakistan/UOL-IMBB/2021-20 | F | 1496 | stop | 2 | 20210921 |
| EPI_ISL_11532243 | NSP3 | hCoV-19/USA/UT-UPHL-220326498946/2022 | F | 1496 | insDFS | 1 | 20220122 |
| EPI_ISL_15280311 | NSP3 | hCoV-19/Japan/PG-359503/2022 | F | 1496 | N | 3 | 20220906 |
| EPI_ISL_1752671 | NSP3 | hCoV-19/Czech Republic/184954-21Ncs/2021 | F | 1496 | insYS | 1 | 20210331 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | F | 1496 | M | 1 | 20210716 |
| EPI_ISL_16829092 | NSP3 | hCoV-19/Italy/LOM-ASST-69283205/2023 | F | 1496 | G | 10 | 20230130 |
| EPI_ISL_3728083 | NSP3 | hCoV-19/England/QEUH-1C43855/2021 | F | 1496 | insSLG | 1 | 20210818 |
| EPI_ISL_3556836 | NSP3 | hCoV-19/USA/ID-IBL-632543/2020 | F | 1496 | insstop | 1 | 20200717 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | F | 1496 | R | 1 | 20210917 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | K | 1497 | C | 1 | 20211015 |
| EPI_ISL_13242837 | NSP3 | hCoV-19/USA/WA-UW-22042713471/2022 | K | 1497 | V | 2 | 20220427 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | K | 1497 | A | 1 | 20220812 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | K | 1497 | del | 87 | 20240812 |
| EPI_ISL_5411335 | NSP3 | hCoV-19/Pakistan/UOL-IMBB/2021-20 | K | 1497 | H | 1 | 20210921 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | K | 1497 | Y | 9 | 20220704 |
| EPI_ISL_18973509 | NSP3 | hCoV-19/USA/OH-ODH-SC4030861/2024 | K | 1497 | T | 29 | 20240221 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | K | 1497 | F | 12 | 20220812 |
| EPI_ISL_14367002 | NSP3 | hCoV-19/India/MH-NCCS-526033/2022 | K | 1497 | insGIstopLLLAstopLQSGF | 2 | 20220105 |
| EPI_ISL_15280311 | NSP3 | hCoV-19/Japan/PG-359503/2022 | K | 1497 | S | 3 | 20220906 |
| EPI_ISL_19531603 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJA8K/2024 | K | 1497 | R | 171 | 20241022 |
| EPI_ISL_19215081 | NSP3 | hCoV-19/Puerto Rico/S-6832/2024 | K | 1497 | N | 58 | 20240513 |
| EPI_ISL_14287993 | NSP3 | hCoV-19/USA/ID-IBL-839199/2022 | K | 1497 | insstop | 1 | 20220721 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1497 | W | 1 | 20210318 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | K | 1497 | Q | 12 | 20220910 |
| EPI_ISL_17721567 | NSP3 | hCoV-19/Italy/LOM-69378004/2023 | K | 1497 | stop | 67 | 20230522 |
| EPI_ISL_16684119 | NSP3 | hCoV-19/Brazil/RJ-LNN11263/2023 | K | 1497 | E | 15 | 20230105 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1497 | P | 1 | 20220210 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | K | 1497 | L | 4 | 20230217 |
| EPI_ISL_15292351 | NSP3 | hCoV-19/India/MH-NCCS-P116200003057/2021 | K | 1497 | M | 8 | 20211221 |
| EPI_ISL_19562544 | NSP3 | hCoV-19/env/Germany/BY-LGL-6399459/2024 | K | 1497 | I | 11 | 20241028 |
| EPI_ISL_19277160 | NSP3 | hCoV-19/France/HDF-IPP07358/2024 | W | 1498 | L | 46 | 20240624 |
| EPI_ISL_3756841 | NSP3 | hCoV-19/USA/ID-IBL-747075/2021 | W | 1498 | I | 4 | 20210807 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | W | 1498 | E | 1 | 20230217 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | W | 1498 | insstopF | 1 | 20210716 |
| EPI_ISL_19749776 | NSP3 | hCoV-19/USA/MA-CDC-LC1132656/2025 | W | 1498 | C | 521 | 20250211 |
| EPI_ISL_5441243 | NSP3 | hCoV-19/USA/ID-IBL-758886/2021 | W | 1498 | Q | 1 | 20210918 |
| EPI_ISL_2903213 | NSP3 | hCoV-19/England/OXON-F88EAD/2020 | W | 1498 | insLCRLL | 1 | 20201128 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | W | 1498 | insLS | 1 | 20200807 |
| EPI_ISL_12146245 | NSP3 | hCoV-19/Turkey/HSGM-GS1608/2022 | W | 1498 | Y | 4 | 20220401 |
| EPI_ISL_1752671 | NSP3 | hCoV-19/Czech Republic/184954-21Ncs/2021 | W | 1498 | A | 1 | 20210331 |
| EPI_ISL_2903213 | NSP3 | hCoV-19/England/OXON-F88EAD/2020 | W | 1498 | H | 1 | 20201128 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | W | 1498 | insLII | 1 | 20210817 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | W | 1498 | M | 58 | 20230401 |
| EPI_ISL_18118923 | NSP3 | hCoV-19/England/CLIMB-CM7YKU1Q/2023 | W | 1498 | S | 11 | 20230728 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | W | 1498 | del | 109 | 20240812 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | W | 1498 | V | 2 | 20220812 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | W | 1498 | T | 2 | 20210319 |
| EPI_ISL_14287993 | NSP3 | hCoV-19/USA/ID-IBL-839199/2022 | W | 1498 | F | 5 | 20220721 |
| EPI_ISL_13622799 | NSP3 | hCoV-19/Turkey/HSGM-IST-02640/2022 | W | 1498 | K | 5 | 20220622 |
| EPI_ISL_19284647 | NSP3 | hCoV-19/Puerto Rico/S-7117/2024 | W | 1498 | stop | 9 | 20240618 |
| EPI_ISL_19685980 | NSP3 | hCoV-19/France/PAC-RELAB-HCL725000008801/2025 | W | 1498 | R | 253 | 20250102 |
| EPI_ISL_18763673 | NSP3 | hCoV-19/England/CLIMB-CM7YRO16/2024 | W | 1498 | G | 16 | 20240104 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | W | 1498 | N | 2 | 20211103 |
| EPI_ISL_3299528 | NSP3 | hCoV-19/Sweden/UUH-000199563181/2021 | D | 1499 | insstopLLWLSC | 1 | 20210428 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | D | 1499 | del | 111 | 20240812 |
| EPI_ISL_14997814 | NSP3 | hCoV-19/Finland/THL-2218476/2022 | D | 1499 | A | 3 | 20220826 |
| EPI_ISL_18723796 | NSP3 | hCoV-19/Peru/LIM-INS-47564/2023 | D | 1499 | B | 12 | 20231122 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | D | 1499 | F | 12 | 20220704 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | D | 1499 | K | 4 | 20230217 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | D | 1499 | insstopL | 3 | 20210717 |
| EPI_ISL_19052405 | NSP3 | hCoV-19/USA/CA-SEARCH-230620/2023 | D | 1499 | Y | 588 | 20231003 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | D | 1499 | V | 12 | 20231226 |
| EPI_ISL_8803782 | NSP3 | hCoV-19/India/MH-NCCS-55424/2021 | D | 1499 | stop | 2 | 20210731 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | D | 1499 | R | 2 | 20220811 |
| EPI_ISL_12934456 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-022322-1676/2022 | D | 1499 | I | 9 | 20220223 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | D | 1499 | W | 1 | 20210919 |
| EPI_ISL_19829184 | NSP3 | hCoV-19/USA/AL-CDC-LC1136473/2025 | D | 1499 | N | 439 | 20250403 |
| EPI_ISL_16829092 | NSP3 | hCoV-19/Italy/LOM-ASST-69283205/2023 | D | 1499 | E | 9 | 20230130 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | D | 1499 | S | 3 | 20220210 |
| EPI_ISL_5411335 | NSP3 | hCoV-19/Pakistan/UOL-IMBB/2021-20 | D | 1499 | P | 3 | 20210921 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | D | 1499 | T | 1 | 20201102 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | D | 1499 | L | 7 | 20220812 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | D | 1499 | G | 68 | 20230401 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | D | 1499 | H | 23 | 20220812 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | D | 1499 | C | 1 | 20200807 |
| EPI_ISL_14287993 | NSP3 | hCoV-19/USA/ID-IBL-839199/2022 | L | 1500 | C | 1 | 20220721 |
| EPI_ISL_16270410 | NSP3 | hCoV-19/Canada/AB-ABPHL-87491/2022 | L | 1500 | V | 48 | 20221130 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 1500 | Q | 2 | 20211006 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | L | 1500 | del | 97 | 20240812 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | L | 1500 | insFFS | 12 | 20220812 |
| EPI_ISL_14433342 | NSP3 | hCoV-19/Finland/THL-202216161/2022 | L | 1500 | stop | 11 | 20220715 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | L | 1500 | F | 70 | 20230401 |
| EPI_ISL_14611175 | NSP3 | hCoV-19/Chile/AT-99245/2022 | L | 1500 | M | 2 | 20220809 |
| EPI_ISL_19280434 | NSP3 | hCoV-19/Italy/LOM-UNIBS-07169705/2024 | L | 1500 | S | 55 | 20240715 |
| EPI_ISL_18454303 | NSP3 | hCoV-19/Thailand/NIC_BKK_8207/2023 | L | 1500 | G | 2 | 20231021 |
| EPI_ISL_3299528 | NSP3 | hCoV-19/Sweden/UUH-000199563181/2021 | L | 1500 | R | 2 | 20210428 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | L | 1500 | Y | 9 | 20220704 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | L | 1500 | K | 1 | 20230217 |
| EPI_ISL_642429 | NSP3 | hCoV-19/England/QEUH-B116B4/2020 | L | 1500 | J | 1 | 20201102 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | L | 1500 | N | 2 | 20211011 |
| EPI_ISL_16723268 | NSP3 | hCoV-19/Netherlands/UT-AUMC-000395/2023 | L | 1500 | I | 31 | 20230118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1500 | T | 4 | 20220210 |
| EPI_ISL_1752671 | NSP3 | hCoV-19/Czech Republic/184954-21Ncs/2021 | T | 1501 | G | 2 | 20210331 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 1501 | I | 36 | 20230116 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 1501 | M | 1 | 20211006 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | T | 1501 | insLCLVAS | 1 | 20221211 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | T | 1501 | del | 90 | 20240812 |
| EPI_ISL_19024114 | NSP3 | hCoV-19/USA/KS-CDC-2-7674506/2024 | T | 1501 | N | 139 | 20240216 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | T | 1501 | H | 1 | 20210805 |
| EPI_ISL_18426852 | NSP3 | hCoV-19/Canada/ON-PHL-23-35402/2023 | T | 1501 | A | 16 | 20231009 |
| EPI_ISL_14749025 | NSP3 | hCoV-19/India/OR-ILSGS17529/2022 | T | 1501 | C | 1 | 20220202 |
| EPI_ISL_11495888 | NSP3 | hCoV-19/USA/TN-ASC-210551685/2022 | T | 1501 | Y | 3 | 20220210 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | T | 1501 | V | 12 | 20230217 |
| EPI_ISL_1167192 | NSP3 | hCoV-19/Egypt/MASRI-C5-020/2020 | T | 1501 | insD | 1 | 20200913 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | T | 1501 | Q | 1 | 20210919 |
| EPI_ISL_3452496 | NSP3 | hCoV-19/South Korea/KDCA8118/2021 | T | 1501 | P | 1 | 20210730 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | T | 1501 | S | 32 | 20230407 |
| EPI_ISL_12573676 | NSP3 | hCoV-19/USA/ID-IBL-816443/2022 | T | 1501 | stop | 3 | 20220427 |
| EPI_ISL_17585729 | NSP3 | hCoV-19/Egypt/ARMY-CU132/2022 | T | 1501 | insXX | 1 | 20221020 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | T | 1501 | R | 14 | 20230217 |
| EPI_ISL_17585756 | NSP3 | hCoV-19/Egypt/ARMY-CU159/2022 | T | 1501 | F | 6 | 20221117 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | T | 1501 | L | 22 | 20220910 |
| EPI_ISL_19742225 | NSP3 | hCoV-19/France/BFC-RELAB-IPP02242/2025 | A | 1502 | T | 729 | 20250203 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | A | 1502 | Y | 16 | 20211015 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | A | 1502 | G | 30 | 20221211 |
| EPI_ISL_19810414 | NSP3 | hCoV-19/Singapore/Y25R13MSC39/2025 | A | 1502 | V | 5780 | 20250324 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | A | 1502 | W | 1 | 20201214 |
| EPI_ISL_5257722 | NSP3 | hCoV-19/England/NEWC-20D0A14/2021 | A | 1502 | N | 10 | 20211010 |
| EPI_ISL_18686342 | NSP3 | hCoV-19/Switzerland/VD-CHUV-GEN18847/2023 | A | 1502 | D | 46 | 20231212 |
| EPI_ISL_18754314 | NSP3 | hCoV-19/Sweden/D-C018574376/2023 | A | 1502 | S | 57 | 20231218 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 1502 | I | 2 | 20211006 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | A | 1502 | insRL | 1 | 20210919 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | A | 1502 | F | 7 | 20220228 |
| EPI_ISL_16587977 | NSP3 | hCoV-19/Germany/BW-RKI-I-1080450/2022 | A | 1502 | P | 7 | 20221220 |
| EPI_ISL_17585756 | NSP3 | hCoV-19/Egypt/ARMY-CU159/2022 | A | 1502 | stop | 7 | 20221117 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | A | 1502 | del | 96 | 20240812 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | A | 1502 | Q | 1 | 20210817 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | A | 1502 | L | 11 | 20220704 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | A | 1502 | C | 67 | 20230401 |
| EPI_ISL_884294 | NSP3 | hCoV-19/Germany/NI-IOV-60137490/2020 | A | 1502 | insLLSCRVV | 1 | 20200323 |
| EPI_ISL_14749025 | NSP3 | hCoV-19/India/OR-ILSGS17529/2022 | A | 1502 | H | 1 | 20220202 |
| EPI_ISL_5463112 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688972/2021 | A | 1502 | R | 2 | 20211008 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | F | 1503 | insN | 1 | 20210805 |
| EPI_ISL_18454303 | NSP3 | hCoV-19/Thailand/NIC_BKK_8207/2023 | F | 1503 | D | 1 | 20231021 |
| EPI_ISL_7637683 | NSP3 | hCoV-19/Greece/311943/2021 | F | 1503 | H | 7 | 20211107 |
| EPI_ISL_18713429 | NSP3 | hCoV-19/Switzerland/TI-EOC-42_28520484/2023 | F | 1503 | Y | 38 | 20231206 |
| EPI_ISL_3452496 | NSP3 | hCoV-19/South Korea/KDCA8118/2021 | F | 1503 | P | 1 | 20210730 |
| EPI_ISL_3922822 | NSP3 | hCoV-19/USA/ID-IBL-638515/2020 | F | 1503 | insY | 1 | 20200801 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | F | 1503 | A | 2 | 20211006 |
| EPI_ISL_19613690 | NSP3 | hCoV-19/Honduras/AT-319/2024 | F | 1503 | del | 106 | 20240812 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | F | 1503 | N | 1 | 20210319 |
| EPI_ISL_18804846 | NSP3 | hCoV-19/USA/CA-CDPH-6000018027/2023 | F | 1503 | I | 37 | 20231217 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | F | 1503 | Q | 1 | 20211015 |
| EPI_ISL_17587175 | NSP3 | hCoV-19/Canada/QC-L00607133001/2023 | F | 1503 | V | 48 | 20230416 |
| EPI_ISL_19317624 | NSP3 | hCoV-19/USA/TX-HMH-M-142357/2024 | F | 1503 | C | 151 | 20240711 |
| EPI_ISL_14458496 | NSP3 | hCoV-19/Israel/ICH-741183967/2022 | F | 1503 | M | 7 | 20220811 |
| EPI_ISL_19831428 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56929/2025 | F | 1503 | L | 355 | 20250405 |
| EPI_ISL_14617140 | NSP3 | hCoV-19/Australia/NSW-ICPMR-32087/2022 | F | 1503 | S | 18 | 20220817 |
| EPI_ISL_12694367 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726468498/2022 | F | 1503 | W | 1 | 20220125 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | F | 1503 | stop | 6 | 20220704 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | F | 1503 | T | 1 | 20220812 |
| EPI_ISL_17585761 | NSP3 | hCoV-19/Egypt/ARMY-CU164/2022 | F | 1503 | insXX | 1 | 20220914 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | G | 1504 | R | 9 | 20220228 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | G | 1504 | L | 6 | 20220812 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | G | 1504 | E | 2 | 20210919 |
| EPI_ISL_19467385 | NSP3 | hCoV-19/USA/TX-PHH-CS-04147/2024 | G | 1504 | S | 136 | 20240815 |
| EPI_ISL_2343395 | NSP3 | hCoV-19/Greece/Z8679/2021 | G | 1504 | insXXXXXXXXXHF | 1 | 20210224 |
| EPI_ISL_7637683 | NSP3 | hCoV-19/Greece/311943/2021 | G | 1504 | F | 1 | 20211107 |
| EPI_ISL_17585728 | NSP3 | hCoV-19/Egypt/ARMY-CU131/2022 | G | 1504 | insXX | 1 | 20221019 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | G | 1504 | del | 118 | 20250209 |
| EPI_ISL_15089511 | NSP3 | hCoV-19/USA/TX-HMH-M-115384/2022 | G | 1504 | I | 5 | 20220910 |
| EPI_ISL_18612351 | NSP3 | hCoV-19/Czech Republic/NRL_s2280/2023 | G | 1504 | C | 311 | 20231101 |
| EPI_ISL_19507699 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10124026/2024 | G | 1504 | V | 30 | 20241012 |
| EPI_ISL_17585732 | NSP3 | hCoV-19/Egypt/ARMY-CU135/2022 | G | 1504 | insXLSCR | 1 | 20220903 |
| EPI_ISL_19340492 | NSP3 | hCoV-19/South Korea/KDCA293752/2024 | G | 1504 | D | 12 | 20240716 |
| EPI_ISL_18116326 | NSP3 | hCoV-19/Nepal/NPHL-S-2532/2023 | G | 1504 | W | 70 | 20230626 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | G | 1504 | H | 3 | 20211121 |
| EPI_ISL_19491350 | NSP3 | hCoV-19/Spain/CL-COV49215/2024 | G | 1504 | A | 42 | 20240826 |
| EPI_ISL_17597156 | NSP3 | hCoV-19/Thailand/NIC_BRM_1278/2023 | G | 1504 | stop | 12 | 20230407 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | G | 1504 | N | 3 | 20220321 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | L | 1505 | T | 3 | 20230614 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | L | 1505 | K | 6 | 20221018 |
| EPI_ISL_14458496 | NSP3 | hCoV-19/Israel/ICH-741183967/2022 | L | 1505 | F | 27 | 20220811 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | L | 1505 | insstopLHFLAstop | 1 | 20210805 |
| EPI_ISL_6250446 | NSP3 | hCoV-19/Chile/LR-UACH-00637/2021 | L | 1505 | A | 2 | 20211106 |
| EPI_ISL_19491350 | NSP3 | hCoV-19/Spain/CL-COV49215/2024 | L | 1505 | stop | 44 | 20240826 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | L | 1505 | H | 1 | 20210319 |
| EPI_ISL_16191856 | NSP3 | hCoV-19/Singapore/16203/2022 | L | 1505 | J | 3 | 20221210 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | L | 1505 | insS | 1 | 20210803 |
| EPI_ISL_8718063 | NSP3 | hCoV-19/USA/ID-IBL-781558/2022 | L | 1505 | insstop | 1 | 20220103 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | L | 1505 | D | 2 | 20220812 |
| EPI_ISL_19529273 | NSP3 | hCoV-19/Canada/AB-ABPHL-125768/2024 | L | 1505 | V | 39 | 20241019 |
| EPI_ISL_12866097 | NSP3 | hCoV-19/USA/TX-TCH-TCMC01875-0122/2022 | L | 1505 | Q | 5 | 20220104 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | L | 1505 | C | 6 | 20220324 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | L | 1505 | del | 114 | 20250209 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | L | 1505 | N | 8 | 20220228 |
| EPI_ISL_19390641 | NSP3 | hCoV-19/Portugal/INSA_51963/2024 | L | 1505 | S | 252 | 20240824 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | L | 1505 | insYSFHstopVF | 1 | 20200807 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | L | 1505 | P | 1 | 20210817 |
| EPI_ISL_11495888 | NSP3 | hCoV-19/USA/TN-ASC-210551685/2022 | L | 1505 | G | 2 | 20220210 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | L | 1505 | insYstopCHYCN | 1 | 20210919 |
| EPI_ISL_3299528 | NSP3 | hCoV-19/Sweden/UUH-000199563181/2021 | L | 1505 | insYSFHstopXF | 1 | 20210428 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | L | 1505 | M | 13 | 20220812 |
| EPI_ISL_18931933 | NSP3 | hCoV-19/Israel/SMC-7116923/2024 | L | 1505 | I | 31 | 20240125 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | L | 1505 | insR | 1 | 20200729 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | V | 1506 | insNVstopF | 1 | 20211011 |
| EPI_ISL_14392814 | NSP3 | hCoV-19/India/MH-NCCS-2749002170310/2021 | V | 1506 | Q | 4 | 20211105 |
| EPI_ISL_19681235 | NSP3 | hCoV-19/Germany/HB-RKI-I-1147103/2024 | V | 1506 | I | 1261 | 20241126 |
| EPI_ISL_14458496 | NSP3 | hCoV-19/Israel/ICH-741183967/2022 | V | 1506 | N | 10 | 20220811 |
| EPI_ISL_19690623 | NSP3 | hCoV-19/USA/NY-PRL-250122_81A12/2025 | V | 1506 | F | 972 | 20250107 |
| EPI_ISL_11799944 | NSP3 | hCoV-19/USA/ID-IBL-808457/2022 | V | 1506 | C | 4 | 20220323 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | V | 1506 | Y | 19 | 20221211 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | V | 1506 | del | 130 | 20250209 |
| EPI_ISL_18299989 | NSP3 | hCoV-19/Netherlands/FL-RIVM-131416/2023 | V | 1506 | G | 229 | 20230910 |
| EPI_ISL_16447640 | NSP3 | hCoV-19/Italy/LOM-ASST-69257696/2023 | V | 1506 | D | 3 | 20230103 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 1506 | W | 1 | 20220812 |
| EPI_ISL_19793642 | NSP3 | hCoV-19/USA/MN-MDH-46554/2025 | V | 1506 | A | 173 | 20250220 |
| EPI_ISL_19390864 | NSP3 | hCoV-19/Puerto Rico/CVL025712/2024 | V | 1506 | L | 72 | 20240719 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1506 | E | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1506 | K | 1 | 20210318 |
| EPI_ISL_18116326 | NSP3 | hCoV-19/Nepal/NPHL-S-2532/2023 | V | 1506 | S | 77 | 20230626 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | A | 1507 | L | 21 | 20221201 |
| EPI_ISL_17585732 | NSP3 | hCoV-19/Egypt/ARMY-CU135/2022 | A | 1507 | F | 1 | 20220903 |
| EPI_ISL_17241605 | NSP3 | hCoV-19/Israel/ICH-741196781/2023 | A | 1507 | P | 3 | 20230309 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | A | 1507 | I | 4 | 20230614 |
| EPI_ISL_9715694 | NSP3 | hCoV-19/Germany/BW-RKI-I-500174/2022 | A | 1507 | G | 21 | 20220119 |
| EPI_ISL_19800151 | NSP3 | hCoV-19/USA/IA-SHL-2600070/2025 | A | 1507 | V | 1400 | 20250317 |
| EPI_ISL_15401404 | NSP3 | hCoV-19/Japan/PG-373387/2022 | A | 1507 | Y | 3 | 20220803 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | A | 1507 | insstopL | 1 | 20210915 |
| EPI_ISL_18951446 | NSP3 | hCoV-19/USA/MS-MSPHL-0163/2024 | A | 1507 | S | 79 | 20240215 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | A | 1507 | insF | 1 | 20221211 |
| EPI_ISL_10646033 | NSP3 | hCoV-19/Switzerland/BL-ETHZ-36336993/2022 | A | 1507 | E | 6 | 20220213 |
| EPI_ISL_19826623 | NSP3 | hCoV-19/USA/NY-PRL-250408_83B01/2025 | A | 1507 | T | 342 | 20250330 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | A | 1507 | del | 121 | 20250209 |
| EPI_ISL_15416636 | NSP3 | hCoV-19/USA/ID-IBL-855071/2022 | A | 1507 | insstopC | 1 | 20220920 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | A | 1507 | N | 3 | 20211121 |
| EPI_ISL_18455254 | NSP3 | hCoV-19/env/Ukraine/80640/2023 | A | 1507 | Q | 49 | 20230918 |
| EPI_ISL_18116326 | NSP3 | hCoV-19/Nepal/NPHL-S-2532/2023 | A | 1507 | C | 83 | 20230626 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | A | 1507 | R | 6 | 20230217 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | A | 1507 | stop | 1 | 20220812 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1507 | K | 1 | 20220210 |
| EPI_ISL_17694877 | NSP3 | hCoV-19/Singapore/R32MR160/2023 | E | 1508 | G | 12 | 20230512 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | E | 1508 | K | 12 | 20230217 |
| EPI_ISL_18951446 | NSP3 | hCoV-19/USA/MS-MSPHL-0163/2024 | E | 1508 | D | 22 | 20240215 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | E | 1508 | insstopLQSGF | 1 | 20210812 |
| EPI_ISL_17560565 | NSP3 | hCoV-19/USA/CA-GBW-H20-318-8314/2023 | E | 1508 | Q | 5 | 20230416 |
| EPI_ISL_3299528 | NSP3 | hCoV-19/Sweden/UUH-000199563181/2021 | E | 1508 | T | 2 | 20210428 |
| EPI_ISL_5511689 | NSP3 | hCoV-19/USA/ID-IBL-758630/2021 | E | 1508 | insGC | 1 | 20210915 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | E | 1508 | L | 1 | 20201214 |
| EPI_ISL_18455254 | NSP3 | hCoV-19/env/Ukraine/80640/2023 | E | 1508 | S | 61 | 20230918 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | E | 1508 | F | 15 | 20230614 |
| EPI_ISL_17603446 | NSP3 | hCoV-19/USA/WI-WSLH-2300441/2023 | E | 1508 | V | 10 | 20230212 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | E | 1508 | del | 115 | 20250209 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | E | 1508 | Y | 4 | 20221201 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | E | 1508 | stop | 35 | 20230217 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | E | 1508 | insIstop | 1 | 20211121 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | E | 1508 | H | 3 | 20221211 |
| EPI_ISL_16986436 | NSP3 | hCoV-19/USA/LA-EVTL18589/2023 | E | 1508 | A | 5 | 20230131 |
| EPI_ISL_14917449 | NSP3 | hCoV-19/Denmark/DCGC-576686/2022 | E | 1508 | Z | 2 | 20220904 |
| EPI_ISL_18116326 | NSP3 | hCoV-19/Nepal/NPHL-S-2532/2023 | E | 1508 | R | 75 | 20230626 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | E | 1508 | N | 10 | 20221018 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | E | 1508 | insGF | 1 | 20210114 |
| EPI_ISL_17692352 | NSP3 | hCoV-19/Italy/LOM-69371798/2023 | W | 1509 | R | 6 | 20230517 |
| EPI_ISL_867116 | NSP3 | hCoV-19/England/OXON-F4A733/2021 | W | 1509 | N | 1 | 20210103 |
| EPI_ISL_11336290 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0476/2021 | W | 1509 | E | 1 | 20211218 |
| EPI_ISL_19256645 | NSP3 | hCoV-19/Hubei/HCDC-WH5764/2024 | W | 1509 | S | 9 | 20240626 |
| EPI_ISL_2775409 | NSP3 | hCoV-19/Brazil/PR-FIOCRUZ-HF163/2021 | W | 1509 | insQKPHVA | 1 | 20210302 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | W | 1509 | A | 1 | 20211011 |
| EPI_ISL_13818622 | NSP3 | hCoV-19/USA/CA-CDPH-RPSRH-4815068/2021 | W | 1509 | insXFGI | 1 | 20210813 |
| EPI_ISL_18116326 | NSP3 | hCoV-19/Nepal/NPHL-S-2532/2023 | W | 1509 | V | 76 | 20230626 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | W | 1509 | K | 1 | 20201214 |
| EPI_ISL_14611194 | NSP3 | hCoV-19/Chile/BI-100118/2022 | W | 1509 | Y | 10 | 20220815 |
| EPI_ISL_19764446 | NSP3 | hCoV-19/Spain/AS-HUCA-232515734/2025 | W | 1509 | L | 26 | 20250221 |
| EPI_ISL_15701702 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-39791/2022 | W | 1509 | stop | 13 | 20221021 |
| EPI_ISL_19785542 | NSP3 | hCoV-19/Brazil/PB-IEC-006949/2025 | W | 1509 | C | 3754 | 20250124 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | W | 1509 | M | 1 | 20210817 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | W | 1509 | I | 11 | 20230217 |
| EPI_ISL_14367002 | NSP3 | hCoV-19/India/MH-NCCS-526033/2022 | W | 1509 | insLQSCNCFSA | 3 | 20220105 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | W | 1509 | del | 98 | 20250209 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | W | 1509 | F | 12 | 20230614 |
| EPI_ISL_18455254 | NSP3 | hCoV-19/env/Ukraine/80640/2023 | W | 1509 | G | 58 | 20230918 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | F | 1510 | insSMSCCCNS | 1 | 20221211 |
| EPI_ISL_19373355 | NSP3 | hCoV-19/Mexico/YUC_InDRE_FB981/2024 | F | 1510 | I | 12 | 20240429 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | F | 1510 | del | 102 | 20250209 |
| EPI_ISL_1184558 | NSP3 | hCoV-19/Sri Lanka/Genelabs_CA53555/2021 | F | 1510 | P | 2 | 20210205 |
| EPI_ISL_1167192 | NSP3 | hCoV-19/Egypt/MASRI-C5-020/2020 | F | 1510 | insRF | 1 | 20200913 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | F | 1510 | insRFFRH | 1 | 20210508 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | F | 1510 | insQSCNCFSAI | 3 | 20220117 |
| EPI_ISL_3299528 | NSP3 | hCoV-19/Sweden/UUH-000199563181/2021 | F | 1510 | insGCNHA | 2 | 20210428 |
| EPI_ISL_9700098 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS.22.01380/2022 | F | 1510 | W | 2 | 20220118 |
| EPI_ISL_19105343 | NSP3 | hCoV-19/USA/MI-MIS-L374236287/2024 | F | 1510 | C | 114 | 20240209 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | F | 1510 | D | 3 | 20230217 |
| EPI_ISL_2775409 | NSP3 | hCoV-19/Brazil/PR-FIOCRUZ-HF163/2021 | F | 1510 | K | 1 | 20210302 |
| EPI_ISL_17585732 | NSP3 | hCoV-19/Egypt/ARMY-CU135/2022 | F | 1510 | Y | 10 | 20220903 |
| EPI_ISL_5348555 | NSP3 | hCoV-19/USA/ID-IBL-758467/2021 | F | 1510 | G | 1 | 20210915 |
| EPI_ISL_7637629 | NSP3 | hCoV-19/Greece/311894/2021 | F | 1510 | R | 1 | 20211115 |
| EPI_ISL_5007310 | NSP3 | hCoV-19/South Korea/KDCA12720/2021 | F | 1510 | N | 1 | 20210829 |
| EPI_ISL_19582613 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12168-P0/2024 | F | 1510 | L | 477 | 20241117 |
| EPI_ISL_19823440 | NSP3 | hCoV-19/Japan/FR021-0246/2025 | F | 1510 | S | 67 | 20250305 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | F | 1510 | H | 18 | 20230217 |
| EPI_ISL_19012038 | NSP3 | hCoV-19/Canada/ON-KHS-01592-v2/2024 | F | 1510 | V | 290 | 20240315 |
| EPI_ISL_19511259 | NSP3 | hCoV-19/Netherlands/ZH-EMC-8881/2024 | L | 1511 | V | 1314 | 20240831 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | L | 1511 | R | 1 | 20210817 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | L | 1511 | I | 23 | 20230217 |
| EPI_ISL_19192475 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16023/2024 | L | 1511 | G | 21 | 20240324 |
| EPI_ISL_19525145 | NSP3 | hCoV-19/USA/NE-NM_L382120519/2024 | L | 1511 | F | 2727 | 20241011 |
| EPI_ISL_12581338 | NSP3 | hCoV-19/Turkey/HSGM-GS2670/2022 | L | 1511 | Y | 2 | 20220405 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1511 | D | 1 | 20220210 |
| EPI_ISL_19351731 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16202/2024 | L | 1511 | W | 78 | 20240625 |
| EPI_ISL_19334615 | NSP3 | hCoV-19/Egypt/CPHL-EGY24131/2024 | L | 1511 | C | 3 | 20240625 |
| EPI_ISL_9710129 | NSP3 | hCoV-19/Chile/NB-20789/2022 | L | 1511 | M | 18 | 20220131 |
| EPI_ISL_14311863 | NSP3 | hCoV-19/USA/DE-DHSS-B1135416/2021 | L | 1511 | H | 1 | 20211011 |
| EPI_ISL_3756896 | NSP3 | hCoV-19/USA/ID-IBL-746949/2021 | L | 1511 | insK | 1 | 20210806 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | L | 1511 | Q | 5 | 20220812 |
| EPI_ISL_18385483 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69482906/2023 | L | 1511 | stop | 15 | 20231007 |
| EPI_ISL_19328857 | NSP3 | hCoV-19/USA/MD-UM-G44S50P2/2024 | L | 1511 | S | 63 | 20240627 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | L | 1511 | del | 111 | 20250209 |
| EPI_ISL_7637629 | NSP3 | hCoV-19/Greece/311894/2021 | L | 1511 | E | 1 | 20211115 |
| EPI_ISL_17372638 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2562/2023 | A | 1512 | Q | 10 | 20230116 |
| EPI_ISL_18451057 | NSP3 | hCoV-19/Israel/ICH-741199630/2023 | A | 1512 | C | 21 | 20231017 |
| EPI_ISL_17062648 | NSP3 | hCoV-19/Thailand/NIC_CMI_683/2023 | A | 1512 | V | 21 | 20230124 |
| EPI_ISL_19722466 | NSP3 | hCoV-19/Denmark/DCGC-691758/2025 | A | 1512 | S | 285 | 20250120 |
| EPI_ISL_3759988 | NSP3 | hCoV-19/USA/ID-IBL-747478/2021 | A | 1512 | H | 2 | 20210809 |
| EPI_ISL_11336290 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0476/2021 | A | 1512 | P | 3 | 20211218 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | A | 1512 | F | 18 | 20230217 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | A | 1512 | del | 191 | 20250209 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | A | 1512 | stop | 1 | 20210801 |
| EPI_ISL_19192475 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16023/2024 | A | 1512 | I | 28 | 20240324 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | A | 1512 | N | 1 | 20201214 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 1512 | R | 5 | 20211006 |
| EPI_ISL_19334615 | NSP3 | hCoV-19/Egypt/CPHL-EGY24131/2024 | A | 1512 | G | 723 | 20240625 |
| EPI_ISL_13622799 | NSP3 | hCoV-19/Turkey/HSGM-IST-02640/2022 | A | 1512 | insFVT | 1 | 20220622 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | A | 1512 | insP | 1 | 20210805 |
| EPI_ISL_2343395 | NSP3 | hCoV-19/Greece/Z8679/2021 | A | 1512 | W | 2 | 20210224 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | A | 1512 | L | 32 | 20240414 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | A | 1512 | M | 3 | 20210817 |
| EPI_ISL_18455258 | NSP3 | hCoV-19/env/Ukraine/80326/2023 | A | 1512 | T | 17 | 20230904 |
| EPI_ISL_17062648 | NSP3 | hCoV-19/Thailand/NIC_CMI_683/2023 | Y | 1513 | A | 4 | 20230124 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | Y | 1513 | S | 6 | 20221018 |
| EPI_ISL_17585731 | NSP3 | hCoV-19/Egypt/ARMY-CU134/2022 | Y | 1513 | G | 2 | 20220902 |
| EPI_ISL_6250446 | NSP3 | hCoV-19/Chile/LR-UACH-00637/2021 | Y | 1513 | V | 1 | 20211106 |
| EPI_ISL_1249105 | NSP3 | hCoV-19/England/OXON-F6D187/2021 | Y | 1513 | W | 1 | 20210210 |
| EPI_ISL_11336290 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0476/2021 | Y | 1513 | K | 1 | 20211218 |
| EPI_ISL_16537048 | NSP3 | hCoV-19/Reunion/ChuReu-722122362501/2022 | Y | 1513 | D | 3 | 20221226 |
| EPI_ISL_19334615 | NSP3 | hCoV-19/Egypt/CPHL-EGY24131/2024 | Y | 1513 | I | 128 | 20240625 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | Y | 1513 | P | 11 | 20230217 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | Y | 1513 | F | 97 | 20221211 |
| EPI_ISL_14424686 | NSP3 | hCoV-19/Russia/MOS-CRIE-7756036272/2022 | Y | 1513 | stop | 33 | 20220611 |
| EPI_ISL_19559053 | NSP3 | hCoV-19/USA/PA-PHL2-VH-A-G10-0913/2024 | Y | 1513 | H | 181 | 20240826 |
| EPI_ISL_18451057 | NSP3 | hCoV-19/Israel/ICH-741199630/2023 | Y | 1513 | R | 21 | 20231017 |
| EPI_ISL_5095421 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688764_CAM_IZSM_COLLI_TIGEM/2021 | Y | 1513 | L | 2 | 20210929 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | Y | 1513 | del | 118 | 20250209 |
| EPI_ISL_14981173 | NSP3 | hCoV-19/Italy/LAZ-UCBM-1761/2022 | Y | 1513 | N | 3 | 20220831 |
| EPI_ISL_19464124 | NSP3 | hCoV-19/USA/CA-SC-285261/2024 | Y | 1513 | C | 34 | 20240705 |
| EPI_ISL_16741724 | NSP3 | hCoV-19/Chile/ML-130448/2022 | Y | 1513 | T | 2 | 20221119 |
| EPI_ISL_12581338 | NSP3 | hCoV-19/Turkey/HSGM-GS2670/2022 | I | 1514 | H | 1 | 20220405 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | I | 1514 | W | 24 | 20240414 |
| EPI_ISL_19174994 | NSP3 | hCoV-19/Japan/FR011-0189/2024 | I | 1514 | S | 81 | 20240430 |
| EPI_ISL_12902224 | NSP3 | hCoV-19/Israel/SMC-7065403/2022 | I | 1514 | P | 2 | 20220425 |
| EPI_ISL_15693005 | NSP3 | hCoV-19/USA/ID-IBL-860691/2022 | I | 1514 | C | 1 | 20221018 |
| EPI_ISL_17370727 | NSP3 | hCoV-19/Malaysia/MGVI_GU0808/2023 | I | 1514 | insFHstop | 30 | 20230109 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | I | 1514 | Q | 5 | 20221211 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | I | 1514 | A | 2 | 20211015 |
| EPI_ISL_17585763 | NSP3 | hCoV-19/Egypt/ARMY-CU166/2022 | I | 1514 | G | 3 | 20220914 |
| EPI_ISL_19784202 | NSP3 | hCoV-19/USA/NC-CDC-LC1134719/2025 | I | 1514 | V | 4608 | 20250310 |
| EPI_ISL_17585732 | NSP3 | hCoV-19/Egypt/ARMY-CU135/2022 | I | 1514 | stop | 12 | 20220903 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | I | 1514 | del | 123 | 20250209 |
| EPI_ISL_19462139 | NSP3 | hCoV-19/Japan/FR302-1279/2024 | I | 1514 | L | 45 | 20240902 |
| EPI_ISL_18168385 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000196444SP/2022 | I | 1514 | F | 15 | 20221128 |
| EPI_ISL_19334596 | NSP3 | hCoV-19/Egypt/CPHL-EGY24127/2024 | I | 1514 | M | 11 | 20240624 |
| EPI_ISL_19622634 | NSP3 | hCoV-19/USA/NM-NMDOH-035694/2024 | I | 1514 | T | 280 | 20241108 |
| EPI_ISL_18719673 | NSP3 | hCoV-19/Canada/SK-RRPL-679600/2023 | I | 1514 | N | 20 | 20231126 |
| EPI_ISL_19334615 | NSP3 | hCoV-19/Egypt/CPHL-EGY24131/2024 | I | 1514 | Y | 125 | 20240625 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | I | 1514 | R | 1 | 20230614 |
| EPI_ISL_5007310 | NSP3 | hCoV-19/South Korea/KDCA12720/2021 | I | 1514 | D | 1 | 20210829 |
| EPI_ISL_3452496 | NSP3 | hCoV-19/South Korea/KDCA8118/2021 | I | 1514 | K | 1 | 20210730 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | L | 1515 | insN | 1 | 20210508 |
| EPI_ISL_19721512 | NSP3 | hCoV-19/USA/WI-WSLH-2403333/2024 | L | 1515 | I | 190 | 20241217 |
| EPI_ISL_18451057 | NSP3 | hCoV-19/Israel/ICH-741199630/2023 | L | 1515 | V | 65 | 20231017 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | L | 1515 | M | 6 | 20220228 |
| EPI_ISL_19323976 | NSP3 | hCoV-19/USA/MS-MSPHL-0270/2024 | L | 1515 | H | 5 | 20240723 |
| EPI_ISL_11336290 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0476/2021 | L | 1515 | T | 1 | 20211218 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | L | 1515 | C | 3 | 20220812 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | L | 1515 | insstopCLSstop | 3 | 20221201 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | L | 1515 | Y | 1 | 20200715 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | L | 1515 | K | 2 | 20210716 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | L | 1515 | insG | 8 | 20220228 |
| EPI_ISL_12902224 | NSP3 | hCoV-19/Israel/SMC-7065403/2022 | L | 1515 | G | 3 | 20220425 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | L | 1515 | insSG | 4 | 20211121 |
| EPI_ISL_18321349 | NSP3 | hCoV-19/England/WSI-33109CD9/2023 | L | 1515 | J | 2211 | 20230911 |
| EPI_ISL_19702134 | NSP3 | hCoV-19/Canada/ON-PHL-202502600/2025 | L | 1515 | F | 3909 | 20250121 |
| EPI_ISL_19438178 | NSP3 | hCoV-19/Canada/BC-BCCDC-732750/2024 | L | 1515 | R | 3 | 20240902 |
| EPI_ISL_19334615 | NSP3 | hCoV-19/Egypt/CPHL-EGY24131/2024 | L | 1515 | S | 131 | 20240625 |
| EPI_ISL_12308644 | NSP3 | hCoV-19/Russia/TVE-CRIE-7725396511/2022 | L | 1515 | N | 3 | 20220127 |
| EPI_ISL_11326422 | NSP3 | hCoV-19/France/IDF-ChVe-21470559/2021 | L | 1515 | Q | 6 | 20211121 |
| EPI_ISL_5086229 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46070/2020 | L | 1515 | insSLG | 1 | 20200723 |
| EPI_ISL_19536043 | NSP3 | hCoV-19/env/Germany/BY-LGL-6379907/2024 | L | 1515 | P | 27 | 20241023 |
| EPI_ISL_9135471 | NSP3 | hCoV-19/USA/NJ-CDC-ASC210578777/2022 | L | 1515 | insFTCT | 1 | 20220105 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | L | 1515 | del | 115 | 20250209 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | F | 1516 | T | 1 | 20220901 |
| EPI_ISL_19192488 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16006/2024 | F | 1516 | S | 95 | 20240315 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | F | 1516 | N | 1 | 20210807 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | F | 1516 | G | 1 | 20201102 |
| EPI_ISL_13294666 | NSP3 | hCoV-19/Vietnam/NHTD-OUCRU2637/2022 | F | 1516 | insSCCRFGstopFLQTIA | 1 | 20220404 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | F | 1516 | W | 6 | 20221201 |
| EPI_ISL_18530382 | NSP3 | hCoV-19/England/CLIMB-CM7YFJ7S/2023 | F | 1516 | I | 16 | 20231114 |
| EPI_ISL_19659605 | NSP3 | hCoV-19/Ireland/D-CS240416/2024 | F | 1516 | L | 580 | 20241108 |
| EPI_ISL_16062067 | NSP3 | hCoV-19/Singapore/15775/2022 | F | 1516 | V | 12 | 20221204 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | F | 1516 | H | 2 | 20230614 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1516 | K | 1 | 20220210 |
| EPI_ISL_19778949 | NSP3 | hCoV-19/South Korea/KDCA297071/2025 | F | 1516 | Y | 122 | 20250217 |
| EPI_ISL_3452496 | NSP3 | hCoV-19/South Korea/KDCA8118/2021 | F | 1516 | stop | 1 | 20210730 |
| EPI_ISL_7509775 | NSP3 | hCoV-19/USA/CA-CSMC669/2020 | F | 1516 | M | 1 | 20200910 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | F | 1516 | del | 116 | 20250209 |
| EPI_ISL_19259772 | NSP3 | hCoV-19/USA/WA-BBI-S25431/2023 | F | 1516 | C | 65 | 20231008 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | F | 1516 | Q | 26 | 20240414 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | T | 1517 | N | 28 | 20230217 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | T | 1517 | W | 15 | 20221225 |
| EPI_ISL_19425908 | NSP3 | hCoV-19/USA/TX-HMH-M-145327/2024 | T | 1517 | H | 135 | 20240820 |
| EPI_ISL_12955192 | NSP3 | hCoV-19/Russia/MAG-CRIE-7729182399/2022 | T | 1517 | P | 5 | 20220208 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | T | 1517 | C | 5 | 20221211 |
| EPI_ISL_16980137 | NSP3 | hCoV-19/Malaysia/C19UMB3760/2023 | T | 1517 | I | 24 | 20230114 |
| EPI_ISL_5511693 | NSP3 | hCoV-19/USA/ID-IBL-758888/2021 | T | 1517 | insHTNSDAPK | 1 | 20210917 |
| EPI_ISL_19192488 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16006/2024 | T | 1517 | L | 53 | 20240315 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | T | 1517 | F | 7 | 20221201 |
| EPI_ISL_18872351 | NSP3 | hCoV-19/USA/MS-MSPHL-0104/2024 | T | 1517 | A | 36 | 20240130 |
| EPI_ISL_18451057 | NSP3 | hCoV-19/Israel/ICH-741199630/2023 | T | 1517 | G | 12 | 20231017 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | T | 1517 | stop | 13 | 20230217 |
| EPI_ISL_19351731 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16202/2024 | T | 1517 | S | 92 | 20240625 |
| EPI_ISL_11686658 | NSP3 | hCoV-19/Indonesia/KU-NIHRD-WGS_22_03503/2022 | T | 1517 | K | 2 | 20220220 |
| EPI_ISL_7232059 | NSP3 | hCoV-19/USA/NM-CDC-ASC210524941/2021 | T | 1517 | insTEP | 1 | 20211105 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | T | 1517 | insP | 1 | 20210812 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | T | 1517 | del | 119 | 20250209 |
| EPI_ISL_12902224 | NSP3 | hCoV-19/Israel/SMC-7065403/2022 | T | 1517 | Y | 10 | 20220425 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | T | 1517 | R | 24 | 20240414 |
| EPI_ISL_15279957 | NSP3 | hCoV-19/USA/ID-IBL-854742/2022 | T | 1517 | Q | 7 | 20220916 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | T | 1517 | V | 12 | 20230315 |
| EPI_ISL_19756709 | NSP3 | hCoV-19/Australia/QLD0x01524A/2025 | R | 1518 | K | 4499 | 20250208 |
| EPI_ISL_17062648 | NSP3 | hCoV-19/Thailand/NIC_CMI_683/2023 | R | 1518 | P | 1 | 20230124 |
| EPI_ISL_1184558 | NSP3 | hCoV-19/Sri Lanka/Genelabs_CA53555/2021 | R | 1518 | D | 2 | 20210205 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | R | 1518 | C | 39 | 20230217 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | R | 1518 | H | 21 | 20230217 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | R | 1518 | insNYTNYH | 2 | 20210801 |
| EPI_ISL_13296620 | NSP3 | hCoV-19/Slovenia/23-023107-MB/2022 | R | 1518 | F | 1 | 20220413 |
| EPI_ISL_18681399 | NSP3 | hCoV-19/Brazil/GO-HLAGYN-2392223/2023 | R | 1518 | M | 28 | 20231106 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | R | 1518 | V | 4 | 20230108 |
| EPI_ISL_19793462 | NSP3 | hCoV-19/Spain/CB-HUMV-5447800/2025 | R | 1518 | S | 332 | 20250218 |
| EPI_ISL_16741724 | NSP3 | hCoV-19/Chile/ML-130448/2022 | R | 1518 | E | 5 | 20221119 |
| EPI_ISL_12771957 | NSP3 | hCoV-19/Russia/KIR-CRIE-7729064557/2022 | R | 1518 | T | 2 | 20220209 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | R | 1518 | insS | 1 | 20230614 |
| EPI_ISL_19555797 | NSP3 | hCoV-19/USA/CO-CDPHE-42410869/2024 | R | 1518 | G | 148 | 20241017 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | R | 1518 | del | 117 | 20250209 |
| EPI_ISL_19425908 | NSP3 | hCoV-19/USA/TX-HMH-M-145327/2024 | R | 1518 | stop | 141 | 20240820 |
| EPI_ISL_19351731 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16202/2024 | R | 1518 | L | 75 | 20240625 |
| EPI_ISL_18451057 | NSP3 | hCoV-19/Israel/ICH-741199630/2023 | R | 1518 | I | 14 | 20231017 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | R | 1518 | A | 5 | 20230217 |
| EPI_ISL_18125073 | NSP3 | hCoV-19/France/OCC-ChuMtp-99232072404/2023 | R | 1518 | N | 21 | 20230726 |
| EPI_ISL_18509200 | NSP3 | hCoV-19/Germany/BW-FR4697/2023 | R | 1518 | W | 11 | 20230827 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | F | 1519 | insSFHstopV | 1 | 20210809 |
| EPI_ISL_18451057 | NSP3 | hCoV-19/Israel/ICH-741199630/2023 | F | 1519 | insS | 13 | 20231017 |
| EPI_ISL_19548845 | NSP3 | hCoV-19/USA/GA-EHC-8227Y/2024 | F | 1519 | S | 135 | 20240905 |
| EPI_ISL_19394382 | NSP3 | hCoV-19/USA/CA-CDC-LC1118287/2024 | F | 1519 | L | 203 | 20240819 |
| EPI_ISL_9146692 | NSP3 | hCoV-19/USA/NJ-CDC-IBX444682862104/2022 | F | 1519 | insEQ | 1 | 20220103 |
| EPI_ISL_15279957 | NSP3 | hCoV-19/USA/ID-IBL-854742/2022 | F | 1519 | N | 2 | 20220916 |
| EPI_ISL_17500665 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13675/2023 | F | 1519 | Q | 2 | 20230324 |
| EPI_ISL_17500644 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13638/2023 | F | 1519 | stop | 1 | 20230316 |
| EPI_ISL_13310998 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2230/2022 | F | 1519 | A | 1 | 20220527 |
| EPI_ISL_19351731 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16202/2024 | F | 1519 | G | 70 | 20240625 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | F | 1519 | insYKLP | 7 | 20230217 |
| EPI_ISL_19282835 | NSP3 | hCoV-19/USA/MS-MSPHL-0231/2024 | F | 1519 | I | 25 | 20240510 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | F | 1519 | del | 117 | 20250209 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | F | 1519 | H | 1 | 20230108 |
| EPI_ISL_17370727 | NSP3 | hCoV-19/Malaysia/MGVI_GU0808/2023 | F | 1519 | T | 39 | 20230109 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | F | 1519 | W | 10 | 20230614 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | F | 1519 | insCST | 3 | 20210310 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | F | 1519 | P | 2 | 20220901 |
| EPI_ISL_19458686 | NSP3 | hCoV-19/France/IDF-RELAB-IPP10706/2024 | F | 1519 | C | 33 | 20240904 |
| EPI_ISL_18999772 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA10622-P0/2024 | F | 1519 | V | 295 | 20240222 |
| EPI_ISL_16741724 | NSP3 | hCoV-19/Chile/ML-130448/2022 | F | 1519 | K | 1 | 20221119 |
| EPI_ISL_18451057 | NSP3 | hCoV-19/Israel/ICH-741199630/2023 | F | 1519 | Y | 34 | 20231017 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | F | 1520 | del | 116 | 20250209 |
| EPI_ISL_12529702 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-LKDiag-DIL1180456/2022 | F | 1520 | P | 1 | 20220425 |
| EPI_ISL_17370727 | NSP3 | hCoV-19/Malaysia/MGVI_GU0808/2023 | F | 1520 | W | 40 | 20230109 |
| EPI_ISL_15135259 | NSP3 | hCoV-19/Thailand/NIC_CBI_23080/2022 | F | 1520 | stop | 2 | 20220901 |
| EPI_ISL_19501807 | NSP3 | hCoV-19/France/GES-RELAB-IPP11551/2024 | F | 1520 | L | 216 | 20240930 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | F | 1520 | S | 18 | 20230614 |
| EPI_ISL_17417888 | NSP3 | hCoV-19/Thailand/NIC_PNB_1020/2023 | F | 1520 | insELYstopCH | 1 | 20230109 |
| EPI_ISL_18255177 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-25/2023 | F | 1520 | I | 15 | 20230411 |
| EPI_ISL_13282085 | NSP3 | hCoV-19/USA/ID-IBL-631576/2020 | F | 1520 | N | 1 | 20200715 |
| EPI_ISL_19300579 | NSP3 | hCoV-19/USA/NY-GBW-GKISBBBD29731/2024 | F | 1520 | C | 4 | 20240718 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | F | 1520 | Q | 1 | 20210716 |
| EPI_ISL_12902224 | NSP3 | hCoV-19/Israel/SMC-7065403/2022 | F | 1520 | H | 4 | 20220425 |
| EPI_ISL_17422743 | NSP3 | hCoV-19/India/un-ICMR-MCL-H-7065-11248/2022 | F | 1520 | V | 9 | 20221021 |
| EPI_ISL_3556836 | NSP3 | hCoV-19/USA/ID-IBL-632543/2020 | F | 1520 | insL | 1 | 20200717 |
| EPI_ISL_16741724 | NSP3 | hCoV-19/Chile/ML-130448/2022 | F | 1520 | A | 1 | 20221119 |
| EPI_ISL_13453602 | NSP3 | hCoV-19/USA/ID-IBL-827091/2022 | F | 1520 | M | 2 | 20220609 |
| EPI_ISL_12573676 | NSP3 | hCoV-19/USA/ID-IBL-816443/2022 | F | 1520 | T | 2 | 20220427 |
| EPI_ISL_10807086 | NSP3 | hCoV-19/Chile/RM-28703/2022 | F | 1520 | insELYstopC | 4 | 20220217 |
| EPI_ISL_16365878 | NSP3 | hCoV-19/Chile/RM-136297/2022 | F | 1520 | insEL | 7 | 20221213 |
| EPI_ISL_11799943 | NSP3 | hCoV-19/USA/ID-IBL-807413/2022 | F | 1520 | insQ | 1 | 20220321 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1520 | K | 1 | 20210318 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | F | 1520 | Y | 34 | 20231226 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 1521 | W | 4 | 20211006 |
| EPI_ISL_18322048 | NSP3 | hCoV-19/USA/TX-HMH-M-134134/2023 | Y | 1521 | stop | 15 | 20230918 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | Y | 1521 | Q | 8 | 20211225 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | Y | 1521 | K | 3 | 20230614 |
| EPI_ISL_17500711 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13654/2023 | Y | 1521 | insEQYILLV | 1 | 20230321 |
| EPI_ISL_18451057 | NSP3 | hCoV-19/Israel/ICH-741199630/2023 | Y | 1521 | H | 77 | 20231017 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | Y | 1521 | E | 12 | 20240414 |
| EPI_ISL_10924488 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11809/2022 | Y | 1521 | insDILLV | 17 | 20220228 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | Y | 1521 | del | 120 | 20250209 |
| EPI_ISL_16998376 | NSP3 | hCoV-19/Ireland/D-FAW32276_25/2023 | Y | 1521 | M | 17 | 20230211 |
| EPI_ISL_2157983 | NSP3 | hCoV-19/Turkey/HSGM-11586/2021 | Y | 1521 | insVLG | 1 | 20210311 |
| EPI_ISL_18637199 | NSP3 | hCoV-19/USA/CA-HLX-STM-K7U9EW72U/2023 | Y | 1521 | C | 154 | 20231110 |
| EPI_ISL_18804992 | NSP3 | hCoV-19/USA/CA-Stanford-175_S30/2024 | Y | 1521 | N | 9 | 20240102 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | Y | 1521 | D | 7 | 20231226 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | Y | 1521 | R | 13 | 20221201 |
| EPI_ISL_17500163 | NSP3 | hCoV-19/Chile/RM-28896/2023 | Y | 1521 | A | 5 | 20230404 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1521 | insSK | 1 | 20230108 |
| EPI_ISL_19190405 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-15915/2024 | Y | 1521 | L | 195 | 20240307 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1521 | V | 2 | 20230108 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | Y | 1521 | S | 5 | 20230307 |
| EPI_ISL_17500665 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13675/2023 | Y | 1521 | I | 37 | 20230324 |
| EPI_ISL_18255177 | NSP3 | hCoV-19/Pakistan/PACP-B13-S-25/2023 | Y | 1521 | F | 45 | 20230411 |
| EPI_ISL_17781226 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000208236SP/2022 | V | 1522 | insW | 10 | 20221212 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | V | 1522 | Y | 25 | 20230307 |
| EPI_ISL_6460611 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-6459/2021 | V | 1522 | D | 1 | 20211023 |
| EPI_ISL_19614533 | NSP3 | hCoV-19/USA/IL-RIPHL_62694_G/2024 | V | 1522 | L | 112 | 20241118 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | V | 1522 | S | 28 | 20230614 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | V | 1522 | W | 5 | 20210716 |
| EPI_ISL_1912917 | NSP3 | hCoV-19/Morocco/FMP-164/2021 | V | 1522 | insQ | 1 | 20210302 |
| EPI_ISL_17500654 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13631/2023 | V | 1522 | M | 7 | 20230315 |
| EPI_ISL_17062648 | NSP3 | hCoV-19/Thailand/NIC_CMI_683/2023 | V | 1522 | T | 12 | 20230124 |
| EPI_ISL_14686409 | NSP3 | hCoV-19/Israel/SMC-7099944/2022 | V | 1522 | insQQR | 1 | 20220811 |
| EPI_ISL_15720766 | NSP3 | hCoV-19/USA/LA-OD-O-0308457169/2022 | V | 1522 | insQLVI | 1 | 20221101 |
| EPI_ISL_19721397 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17329082/2025 | V | 1522 | A | 1406 | 20250126 |
| EPI_ISL_17500655 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13622/2023 | V | 1522 | F | 3 | 20230313 |
| EPI_ISL_18451057 | NSP3 | hCoV-19/Israel/ICH-741199630/2023 | V | 1522 | stop | 29 | 20231017 |
| EPI_ISL_19190405 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-15915/2024 | V | 1522 | C | 187 | 20240307 |
| EPI_ISL_2404761 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050921-705/2021 | V | 1522 | insFLCTW | 1 | 20210509 |
| EPI_ISL_14402451 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-11502/2022 | V | 1522 | K | 3 | 20220708 |
| EPI_ISL_17530278 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14010/2023 | V | 1522 | insVI | 1 | 20230403 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | V | 1522 | del | 118 | 20250209 |
| EPI_ISL_17500742 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13717/2023 | V | 1522 | H | 17 | 20230330 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | V | 1522 | insH | 1 | 20211225 |
| EPI_ISL_17692350 | NSP3 | hCoV-19/Italy/LOM-69371804/2023 | V | 1522 | E | 11 | 20230516 |
| EPI_ISL_19816727 | NSP3 | hCoV-19/Australia/WA16891/2025 | V | 1522 | I | 554 | 20250321 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | V | 1522 | Q | 1 | 20210801 |
| EPI_ISL_12529702 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-LKDiag-DIL1180456/2022 | V | 1522 | N | 2 | 20220425 |
| EPI_ISL_19507699 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10124026/2024 | V | 1522 | G | 43 | 20241012 |
| EPI_ISL_19704257 | NSP3 | hCoV-19/India/DL-VRDL-AHRR-00030/2022 | V | 1522 | insCTW | 1 | 20220803 |
| EPI_ISL_14611187 | NSP3 | hCoV-19/Chile/RM-99931/2022 | L | 1523 | insstopXX | 1 | 20220814 |
| EPI_ISL_11336456 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0656/2021 | L | 1523 | K | 2 | 20211224 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | L | 1523 | Y | 13 | 20230217 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | L | 1523 | G | 1 | 20210717 |
| EPI_ISL_18940973 | NSP3 | hCoV-19/Brazil/CE-FIOCRUZ-178329CE/2023 | L | 1523 | P | 6 | 20231217 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | L | 1523 | del | 162 | 20250209 |
| EPI_ISL_18262870 | NSP3 | hCoV-19/England/CLIMB-CM7YE5J4/2023 | L | 1523 | J | 92 | 20230830 |
| EPI_ISL_17605351 | NSP3 | hCoV-19/Thailand/NIC_BKK_1595/2023 | L | 1523 | stop | 8 | 20230425 |
| EPI_ISL_11406934 | NSP3 | hCoV-19/Chile/RM-199759/2021 | L | 1523 | insstop | 1 | 20211228 |
| EPI_ISL_17804386 | NSP3 | hCoV-19/USA/IL-706004/2023 | L | 1523 | V | 16 | 20230601 |
| EPI_ISL_17417888 | NSP3 | hCoV-19/Thailand/NIC_PNB_1020/2023 | L | 1523 | N | 4 | 20230109 |
| EPI_ISL_18137259 | NSP3 | hCoV-19/USA/MS-MSPHL-0399/2023 | L | 1523 | H | 4 | 20230811 |
| EPI_ISL_17089174 | NSP3 | hCoV-19/Chile/AR-14576/2023 | L | 1523 | M | 5 | 20230222 |
| EPI_ISL_14818337 | NSP3 | hCoV-19/Chile/AR-104653/2022 | L | 1523 | insstopCX | 1 | 20220824 |
| EPI_ISL_11355264 | NSP3 | hCoV-19/France/GES-ChNa-210065115001/2021 | L | 1523 | insDGC | 1 | 20210811 |
| EPI_ISL_19190405 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-15915/2024 | L | 1523 | T | 186 | 20240307 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | L | 1523 | C | 52 | 20231226 |
| EPI_ISL_15348770 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-NIV2223912/2022 | L | 1523 | S | 2 | 20220921 |
| EPI_ISL_19094324 | NSP3 | hCoV-19/USA/NY-NYULH-19215/2024 | L | 1523 | F | 24 | 20240417 |
| EPI_ISL_19766986 | NSP3 | hCoV-19/USA/TX-USAFSAM-S23428/2024 | L | 1523 | I | 160 | 20241213 |
| EPI_ISL_14817739 | NSP3 | hCoV-19/Chile/RM-102089/2022 | L | 1523 | insstopCH | 4 | 20220820 |
| EPI_ISL_19507699 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10124026/2024 | L | 1523 | R | 10 | 20241012 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 1523 | A | 7 | 20211006 |
| EPI_ISL_13050793 | NSP3 | hCoV-19/Spain/CT-HUVH-R65715/2022 | L | 1523 | insSSM | 1 | 20220526 |
| EPI_ISL_13453602 | NSP3 | hCoV-19/USA/ID-IBL-827091/2022 | L | 1523 | D | 1 | 20220609 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | L | 1523 | insN | 2 | 20211228 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | G | 1524 | Y | 6 | 20240414 |
| EPI_ISL_2383001 | NSP3 | hCoV-19/India/MH-NCCS-2748000345603/2021 | G | 1524 | Q | 3 | 20210414 |
| EPI_ISL_5049920 | NSP3 | hCoV-19/Spain/CT-LabRefCat-6071080/2021 | G | 1524 | P | 6 | 20210717 |
| EPI_ISL_7509782 | NSP3 | hCoV-19/USA/CA-CSMC676/2020 | G | 1524 | insGCN | 1 | 20200914 |
| EPI_ISL_16394746 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2434/2022 | G | 1524 | I | 2 | 20221219 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | G | 1524 | L | 6 | 20230413 |
| EPI_ISL_17500655 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13622/2023 | G | 1524 | stop | 17 | 20230313 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | G | 1524 | H | 10 | 20230421 |
| EPI_ISL_17500737 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13656/2023 | G | 1524 | N | 47 | 20230321 |
| EPI_ISL_19190405 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-15915/2024 | G | 1524 | W | 195 | 20240307 |
| EPI_ISL_17500736 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13710/2023 | G | 1524 | D | 11 | 20230329 |
| EPI_ISL_17500665 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13675/2023 | G | 1524 | S | 21 | 20230324 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | G | 1524 | K | 14 | 20211225 |
| EPI_ISL_14458496 | NSP3 | hCoV-19/Israel/ICH-741183967/2022 | G | 1524 | F | 15 | 20220811 |
| EPI_ISL_8706747 | NSP3 | hCoV-19/England/NEWC-2FD8E8A/2021 | G | 1524 | insGIstopL | 5 | 20211223 |
| EPI_ISL_17546500 | NSP3 | hCoV-19/USA/ID-IBL-880572/2023 | G | 1524 | C | 5 | 20230330 |
| EPI_ISL_19623504 | NSP3 | hCoV-19/USA/AZ-ASPHL-1893/2024 | G | 1524 | E | 1129 | 20241203 |
| EPI_ISL_19454050 | NSP3 | hCoV-19/England/CLIMB-CM7YJJMQ/2024 | G | 1524 | V | 291 | 20240923 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | G | 1524 | del | 171 | 20250209 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | G | 1524 | A | 7 | 20230307 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | G | 1524 | insGLstopL | 1 | 20230217 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | G | 1524 | insIstopL | 1 | 20210801 |
| EPI_ISL_14584684 | NSP3 | hCoV-19/Indonesia/JK-NIHRD-WGS-22-16289/2022 | G | 1524 | R | 25 | 20220808 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | G | 1524 | insFLCTstop | 1 | 20210801 |
| EPI_ISL_2224824 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-41531/2020 | G | 1524 | insWLQSCNC | 1 | 20200721 |
| EPI_ISL_17500665 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13675/2023 | L | 1525 | C | 27 | 20230324 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | L | 1525 | insKDQstop | 1 | 20230217 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | L | 1525 | W | 69 | 20231226 |
| EPI_ISL_5934823 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702793090_CAM_IZSM_COLLI_TIGEM/2021 | L | 1525 | insstop | 1 | 20211015 |
| EPI_ISL_19621085 | NSP3 | hCoV-19/Japan/PG-567818/2023 | L | 1525 | M | 69 | 20230810 |
| EPI_ISL_19190405 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-15915/2024 | L | 1525 | insGCNH | 178 | 20240307 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1525 | A | 2 | 20220210 |
| EPI_ISL_11070648 | NSP3 | hCoV-19/Greece/331145/2022 | L | 1525 | N | 2 | 20220207 |
| EPI_ISL_17530297 | NSP3 | hCoV-19/India/MH-ICMR-NIV-V0285/2023 | L | 1525 | insNH | 16 | 20230405 |
| EPI_ISL_19190405 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-15915/2024 | L | 1525 | I | 212 | 20240307 |
| EPI_ISL_19753357 | NSP3 | hCoV-19/Japan/FR036-0034/2025 | L | 1525 | V | 187 | 20250213 |
| EPI_ISL_4950480 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-5609/2021 | L | 1525 | K | 1 | 20210830 |
| EPI_ISL_19590189 | NSP3 | hCoV-19/Georgia/Tb-s8284/2024 | L | 1525 | S | 280 | 20241105 |
| EPI_ISL_7796053 | NSP3 | hCoV-19/Italy/CAM-Biogem-48/2021 | L | 1525 | insSCNCF | 1 | 20210223 |
| EPI_ISL_18129418 | NSP3 | hCoV-19/USA/WI-WSLH-2301395/2023 | L | 1525 | T | 6 | 20230716 |
| EPI_ISL_19531086 | NSP3 | hCoV-19/South Africa/NICD-R08477/2024 | L | 1525 | F | 423 | 20241010 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | L | 1525 | del | 174 | 20250209 |
| EPI_ISL_5309844 | NSP3 | hCoV-19/Sweden/UUH-000200131504/2021 | L | 1525 | insAXNH | 1 | 20210826 |
| EPI_ISL_16365878 | NSP3 | hCoV-19/Chile/RM-136297/2022 | L | 1525 | Y | 12 | 20221213 |
| EPI_ISL_12529702 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-LKDiag-DIL1180456/2022 | L | 1525 | E | 2 | 20220425 |
| EPI_ISL_14458496 | NSP3 | hCoV-19/Israel/ICH-741183967/2022 | L | 1525 | insCTWIGCNH | 8 | 20220811 |
| EPI_ISL_19290337 | NSP3 | hCoV-19/Honduras/AT-238/2024 | L | 1525 | stop | 4 | 20240414 |
| EPI_ISL_17500736 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13710/2023 | L | 1525 | H | 40 | 20230329 |
| EPI_ISL_3923034 | NSP3 | hCoV-19/USA/ID-IBL-748918/2021 | L | 1525 | insE | 1 | 20210812 |
| EPI_ISL_18936287 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00129/2023 | A | 1526 | E | 2 | 20230417 |
| EPI_ISL_17430582 | NSP3 | hCoV-19/Dominican Republic/ 2134021-LNSPDD/2023 | A | 1526 | M | 12 | 20230221 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | A | 1526 | H | 7 | 20230307 |
| EPI_ISL_19802128 | NSP3 | hCoV-19/USA/CA-PFZ04766/2025 | A | 1526 | V | 2899 | 20250307 |
| EPI_ISL_14611163 | NSP3 | hCoV-19/Chile/RM-100737/2022 | A | 1526 | insY | 1 | 20220816 |
| EPI_ISL_4530142 | NSP3 | hCoV-19/England/PHEC-3G06FGEC/2021 | A | 1526 | insS | 1 | 20210919 |
| EPI_ISL_19789298 | NSP3 | hCoV-19/Greece/PHLnetwork_6425/2024 | A | 1526 | S | 931 | 20241201 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | A | 1526 | G | 19 | 20230614 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 1526 | I | 13 | 20230217 |
| EPI_ISL_14817739 | NSP3 | hCoV-19/Chile/RM-102089/2022 | A | 1526 | N | 6 | 20220820 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | A | 1526 | Y | 3 | 20230217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | A | 1526 | K | 1 | 20201214 |
| EPI_ISL_19802129 | NSP3 | hCoV-19/USA/CA-PFZ04767/2025 | A | 1526 | T | 2132 | 20250305 |
| EPI_ISL_15919341 | NSP3 | hCoV-19/Russia/KO-RII-MH109286S/2022 | A | 1526 | D | 5 | 20221021 |
| EPI_ISL_17500665 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13675/2023 | A | 1526 | R | 2 | 20230324 |
| EPI_ISL_15919340 | NSP3 | hCoV-19/Russia/KO-RII-MH109264S/2022 | A | 1526 | P | 5 | 20221017 |
| EPI_ISL_11686658 | NSP3 | hCoV-19/Indonesia/KU-NIHRD-WGS_22_03503/2022 | A | 1526 | stop | 3 | 20220220 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 1526 | C | 21 | 20230108 |
| EPI_ISL_17500690 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13689/2023 | A | 1526 | Q | 15 | 20230327 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | A | 1526 | del | 188 | 20250209 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | A | 1526 | L | 27 | 20230421 |
| EPI_ISL_17602987 | NSP3 | hCoV-19/Thailand/NIC_ATG_1218/2023 | A | 1527 | H | 3 | 20230410 |
| EPI_ISL_16365878 | NSP3 | hCoV-19/Chile/RM-136297/2022 | A | 1527 | N | 9 | 20221213 |
| EPI_ISL_3238418 | NSP3 | hCoV-19/Germany/HH-RKI-I-192998/2021 | A | 1527 | K | 2 | 20210725 |
| EPI_ISL_19824808 | NSP3 | hCoV-19/Spain/PV-HUD-62626046/2025 | A | 1527 | T | 231 | 20250401 |
| EPI_ISL_16638171 | NSP3 | hCoV-19/Austria/AGES-1169416/2022 | A | 1527 | stop | 2 | 20221226 |
| EPI_ISL_15724668 | NSP3 | hCoV-19/Turkey/KSS-MSYSH4871004740/2022 | A | 1527 | P | 1 | 20221101 |
| EPI_ISL_17089174 | NSP3 | hCoV-19/Chile/AR-14576/2023 | A | 1527 | Q | 16 | 20230222 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | A | 1527 | D | 2 | 20230614 |
| EPI_ISL_2219474 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-35038/2020 | A | 1527 | insNXXX | 1 | 20200811 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | A | 1527 | M | 8 | 20230217 |
| EPI_ISL_19821926 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136071/2025 | A | 1527 | V | 19125 | 20250327 |
| EPI_ISL_19802015 | NSP3 | hCoV-19/USA/IL-RIPHL_33494_G/2025 | A | 1527 | S | 196 | 20250309 |
| EPI_ISL_11070648 | NSP3 | hCoV-19/Greece/331145/2022 | A | 1527 | W | 2 | 20220207 |
| EPI_ISL_17463048 | NSP3 | hCoV-19/USA/ID-IBL-878498/2023 | A | 1527 | E | 12 | 20230315 |
| EPI_ISL_17500690 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13689/2023 | A | 1527 | Y | 12 | 20230327 |
| EPI_ISL_2212313 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-38573/2021 | A | 1527 | insWXXXXXXX | 1 | 20210402 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 1527 | L | 20 | 20230217 |
| EPI_ISL_427289 | NSP3 | hCoV-19/USA/OH-OSUP0014/2020 | A | 1527 | insPFVQDstopLstop | 1 | 20200331 |
| EPI_ISL_2658641 | NSP3 | hCoV-19/USA/CA-CZB-30414/2021 | A | 1527 | insNHXX | 1 | 20210321 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | A | 1527 | F | 10 | 20230307 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | A | 1527 | C | 25 | 20230421 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 1527 | G | 15 | 20230108 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | A | 1527 | del | 191 | 20250209 |
| EPI_ISL_19190405 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-15915/2024 | A | 1527 | I | 258 | 20240307 |
| EPI_ISL_8688190 | NSP3 | hCoV-19/Spain/AS-262164773/2021 | A | 1527 | R | 3 | 20211026 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 1527 | insstop | 1 | 20230108 |
| EPI_ISL_18415493 | NSP3 | hCoV-19/USA/UT-UPHL-230926338480/2023 | I | 1528 | M | 20 | 20230901 |
| EPI_ISL_19822743 | NSP3 | hCoV-19/Finland/THL-01179/2025 | I | 1528 | T | 829 | 20250303 |
| EPI_ISL_19705491 | NSP3 | hCoV-19/USA/MS-MSPHL-0365/2024 | I | 1528 | N | 16 | 20241213 |
| EPI_ISL_17299869 | NSP3 | hCoV-19/Spain/AS-232316165/2023 | I | 1528 | Y | 10 | 20230311 |
| EPI_ISL_19666566 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17321818/2025 | I | 1528 | F | 23 | 20250106 |
| EPI_ISL_16258472 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1977/2022 | I | 1528 | insR | 1 | 20220812 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | I | 1528 | insH | 7 | 20211227 |
| EPI_ISL_19110109 | NSP3 | hCoV-19/Mexico/PUE_InDRE_FB795/2024 | I | 1528 | S | 45 | 20240306 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | I | 1528 | del | 211 | 20250209 |
| EPI_ISL_19205317 | NSP3 | hCoV-19/USA/IL-RIPHL_123063_G/2024 | I | 1528 | L | 96 | 20240528 |
| EPI_ISL_10753295 | NSP3 | hCoV-19/India/KA-SEQ_13888_S294_R1_001/2022 | I | 1528 | Q | 2 | 20220202 |
| EPI_ISL_17273430 | NSP3 | hCoV-19/USA/ID-IBL-878317/2023 | I | 1528 | C | 12 | 20230307 |
| EPI_ISL_17062642 | NSP3 | hCoV-19/Thailand/NIC_RET_741/2023 | I | 1528 | J | 5 | 20230124 |
| EPI_ISL_16314971 | NSP3 | hCoV-19/USA/ID-IBL-869779/2022 | I | 1528 | A | 8 | 20221211 |
| EPI_ISL_19702868 | NSP3 | hCoV-19/USA/MN-MDH-45626/2025 | I | 1528 | V | 1461 | 20250113 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | I | 1528 | H | 3 | 20210813 |
| EPI_ISL_17372422 | NSP3 | hCoV-19/India/TN-SPHL-2857/2023 | I | 1528 | K | 4 | 20230304 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | I | 1528 | stop | 14 | 20230217 |
| EPI_ISL_5095420 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688757_CAM_IZSM_COLLI_TIGEM/2021 | I | 1528 | R | 2 | 20210929 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | I | 1528 | G | 5 | 20220228 |
| EPI_ISL_5484715 | NSP3 | hCoV-19/England/PHEC-3M0A9M08/2021 | I | 1528 | W | 1 | 20211011 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | I | 1528 | E | 2 | 20230104 |
| EPI_ISL_19541401 | NSP3 | hCoV-19/Italy/LAZ-UCBM-2024-35/2024 | M | 1529 | T | 180 | 20241019 |
| EPI_ISL_18936286 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00127/2023 | M | 1529 | C | 25 | 20230418 |
| EPI_ISL_11326419 | NSP3 | hCoV-19/France/IDF-ChVe-21465903/2021 | M | 1529 | Q | 4 | 20211120 |
| EPI_ISL_4530197 | NSP3 | hCoV-19/England/PHEC-3G074G19/2021 | M | 1529 | insHF | 1 | 20210919 |
| EPI_ISL_15514432 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-116718/2022 | M | 1529 | N | 13 | 20221001 |
| EPI_ISL_1703647 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-VOC-170/2020 | M | 1529 | A | 1 | 20201228 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | M | 1529 | del | 205 | 20250209 |
| EPI_ISL_19666566 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17321818/2025 | M | 1529 | F | 280 | 20250106 |
| EPI_ISL_17372422 | NSP3 | hCoV-19/India/TN-SPHL-2857/2023 | M | 1529 | K | 43 | 20230304 |
| EPI_ISL_18514911 | NSP3 | hCoV-19/Spain/AS-HUCA-66104/2023 | M | 1529 | H | 19 | 20231105 |
| EPI_ISL_16394746 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2434/2022 | M | 1529 | E | 4 | 20221219 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | M | 1529 | stop | 8 | 20220117 |
| EPI_ISL_2423511 | NSP3 | hCoV-19/USA/OR-OSPHL00814/2021 | M | 1529 | insC | 2 | 20210515 |
| EPI_ISL_19832959 | NSP3 | hCoV-19/Japan/FR032-0102/2025 | M | 1529 | L | 214 | 20250302 |
| EPI_ISL_13605974 | NSP3 | hCoV-19/Israel/ICH-741233985/2022 | M | 1529 | insF | 3 | 20220622 |
| EPI_ISL_9186619 | NSP3 | hCoV-19/France/GES-HMN-22012110572/2021 | M | 1529 | W | 2 | 20211227 |
| EPI_ISL_19380217 | NSP3 | hCoV-19/USA/MS-MSPHL-0309/2024 | M | 1529 | I | 1837 | 20240805 |
| EPI_ISL_9911825 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344002/2022 | M | 1529 | G | 1 | 20220206 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | M | 1529 | insLS | 1 | 20220224 |
| EPI_ISL_1415104 | NSP3 | hCoV-19/India/MH-NCCS-116645/2020 | M | 1529 | insDWLQQ | 1 | 20201123 |
| EPI_ISL_19398365 | NSP3 | hCoV-19/USA/MS-MSPHL-0344/2024 | M | 1529 | R | 21 | 20240820 |
| EPI_ISL_18674603 | NSP3 | hCoV-19/Netherlands/ZE-RIVM-135464/2023 | M | 1529 | V | 76 | 20231207 |
| EPI_ISL_18936287 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00129/2023 | M | 1529 | S | 19 | 20230417 |
| EPI_ISL_17623925 | NSP3 | hCoV-19/Thailand/NIC_BKK_1741/2023 | M | 1529 | insXX | 2 | 20230426 |
| EPI_ISL_12410765 | NSP3 | hCoV-19/France/IDF-HMN-22032290312/2022 | M | 1529 | P | 6 | 20220321 |
| EPI_ISL_12078153 | NSP3 | hCoV-19/England/PHEC-YYRG364/2022 | Q | 1530 | Z | 1 | 20220330 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | Q | 1530 | del | 191 | 20250209 |
| EPI_ISL_18546408 | NSP3 | hCoV-19/USA/TX-HMH-M-135257/2023 | Q | 1530 | H | 30 | 20231101 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | Q | 1530 | D | 8 | 20230217 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | Q | 1530 | insWLQSCN | 1 | 20210801 |
| EPI_ISL_17500665 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13675/2023 | Q | 1530 | G | 4 | 20230324 |
| EPI_ISL_8480852 | NSP3 | hCoV-19/France/BFC-HMN-21122040156/2021 | Q | 1530 | P | 1 | 20211129 |
| EPI_ISL_19666566 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17321818/2025 | Q | 1530 | L | 20 | 20250106 |
| EPI_ISL_19727695 | NSP3 | hCoV-19/USA/IL-RIPHL_123793_G/2025 | Q | 1530 | stop | 31 | 20250120 |
| EPI_ISL_13310993 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2225/2022 | Q | 1530 | Y | 13 | 20220517 |
| EPI_ISL_15116772 | NSP3 | hCoV-19/Chile/LL-106319/2022 | Q | 1530 | F | 5 | 20220829 |
| EPI_ISL_19421535 | NSP3 | hCoV-19/Uzbekistan/UZBRIV-491/2024 | Q | 1530 | K | 62 | 20240822 |
| EPI_ISL_5049897 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1638258/2021 | Q | 1530 | insstopQstop | 1 | 20210510 |
| EPI_ISL_2775409 | NSP3 | hCoV-19/Brazil/PR-FIOCRUZ-HF163/2021 | Q | 1530 | M | 1 | 20210302 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | Q | 1530 | insYILL | 1 | 20211015 |
| EPI_ISL_18081269 | NSP3 | hCoV-19/env/Germany/BY-LGL-5955508/2023 | Q | 1530 | N | 71 | 20230717 |
| EPI_ISL_11070648 | NSP3 | hCoV-19/Greece/331145/2022 | Q | 1530 | W | 3 | 20220207 |
| EPI_ISL_16365848 | NSP3 | hCoV-19/Chile/VS-135638/2022 | Q | 1530 | insPX | 3 | 20221212 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | Q | 1530 | V | 3 | 20230217 |
| EPI_ISL_19495880 | NSP3 | hCoV-19/Canada/BC-BCCDC-740428/2024 | Q | 1530 | R | 246 | 20240929 |
| EPI_ISL_3793312 | NSP3 | hCoV-19/Sweden/15135029P/2021 | Q | 1530 | insNstopSCTNG | 4 | 20210310 |
| EPI_ISL_19380217 | NSP3 | hCoV-19/USA/MS-MSPHL-0309/2024 | Q | 1530 | T | 6 | 20240805 |
| EPI_ISL_16741724 | NSP3 | hCoV-19/Chile/ML-130448/2022 | Q | 1530 | insPTX | 1 | 20221119 |
| EPI_ISL_10807087 | NSP3 | hCoV-19/Chile/VS-28683/2022 | Q | 1530 | insPT | 3 | 20220216 |
| EPI_ISL_5324097 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00362273_CAM_IZSM_COLLI_TIGEM/2021 | Q | 1530 | C | 11 | 20210918 |
| EPI_ISL_17675625 | NSP3 | hCoV-19/Brazil/MG-LBI-2489/2022 | Q | 1530 | insXL | 1 | 20220529 |
| EPI_ISL_18936287 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00129/2023 | Q | 1530 | S | 30 | 20230417 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | Q | 1530 | insSG | 1 | 20230217 |
| EPI_ISL_16599755 | NSP3 | hCoV-19/USA/TX-HMH-122848/2023 | Q | 1530 | A | 18 | 20230106 |
| EPI_ISL_16480818 | NSP3 | hCoV-19/Japan/TKYkbm69710/2022 | Q | 1530 | I | 6 | 20221208 |
| EPI_ISL_17500743 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13652/2023 | Q | 1530 | E | 12 | 20230321 |
| EPI_ISL_15518244 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2396/2022 | L | 1531 | K | 5 | 20220921 |
| EPI_ISL_9357312 | NSP3 | hCoV-19/France/IDF-HMN-22012240592/2022 | L | 1531 | R | 6 | 20220121 |
| EPI_ISL_17500687 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13850/2023 | L | 1531 | T | 16 | 20230328 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | L | 1531 | del | 201 | 20250209 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | L | 1531 | W | 23 | 20231226 |
| EPI_ISL_19803382 | NSP3 | hCoV-19/France/ARA-HCL025036150801/2025 | L | 1531 | V | 145 | 20250228 |
| EPI_ISL_14846541 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-138/2022 | L | 1531 | insQLFCST | 1 | 20220423 |
| EPI_ISL_2224824 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-41531/2020 | L | 1531 | Y | 1 | 20200721 |
| EPI_ISL_12529720 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-Star osp-12207/2022 | L | 1531 | A | 1 | 20220421 |
| EPI_ISL_3154869 | NSP3 | hCoV-19/Spain/CT-HUJ23-94751/2021 | L | 1531 | N | 3 | 20210726 |
| EPI_ISL_19666566 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17321818/2025 | L | 1531 | M | 26 | 20250106 |
| EPI_ISL_3299528 | NSP3 | hCoV-19/Sweden/UUH-000199563181/2021 | L | 1531 | insstopSCTNGP | 1 | 20210428 |
| EPI_ISL_15788897 | NSP3 | hCoV-19/Italy/ABR-IZSGC-50673/2022 | L | 1531 | G | 1 | 20221108 |
| EPI_ISL_19226511 | NSP3 | hCoV-19/Lithuania/MB240326_0101/2024 | L | 1531 | stop | 108 | 20240323 |
| EPI_ISL_8054640 | NSP3 | hCoV-19/France/IDF-HMN-21122150744/2021 | L | 1531 | E | 5 | 20211215 |
| EPI_ISL_19671416 | NSP3 | hCoV-19/Finland/THL-09762/2024 | L | 1531 | F | 409 | 20241217 |
| EPI_ISL_17500730 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13612/2023 | L | 1531 | Q | 11 | 20230310 |
| EPI_ISL_18546408 | NSP3 | hCoV-19/USA/TX-HMH-M-135257/2023 | L | 1531 | C | 70 | 20231101 |
| EPI_ISL_10943894 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8382/2022 | L | 1531 | insT | 1 | 20220206 |
| EPI_ISL_17430582 | NSP3 | hCoV-19/Dominican Republic/ 2134021-LNSPDD/2023 | L | 1531 | P | 6 | 20230221 |
| EPI_ISL_8633415 | NSP3 | hCoV-19/France/IDF-HMN-22012040886/2022 | L | 1531 | Z | 1 | 20220104 |
| EPI_ISL_11793451 | NSP3 | hCoV-19/India/KA-SEQ_14221_S82_R1_001/2022 | L | 1531 | D | 2 | 20220215 |
| EPI_ISL_962883 | NSP3 | hCoV-19/Portugal/IGC_g131/2020 | L | 1531 | insXX | 1 | 20201223 |
| EPI_ISL_18936288 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00134/2023 | L | 1531 | I | 40 | 20230419 |
| EPI_ISL_15486874 | NSP3 | hCoV-19/Israel/ICH-741189282/2022 | L | 1531 | insC | 1 | 20221010 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | L | 1531 | H | 1 | 20210716 |
| EPI_ISL_18941321 | NSP3 | hCoV-19/Hubei/HCDC-YC3868/2024 | L | 1531 | S | 40 | 20240220 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | F | 1532 | W | 5 | 20230307 |
| EPI_ISL_17500690 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13689/2023 | F | 1532 | I | 9 | 20230327 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | F | 1532 | R | 3 | 20210416 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | F | 1532 | A | 1 | 20220131 |
| EPI_ISL_2615400 | NSP3 | hCoV-19/Brazil/SP-2755/2021 | F | 1532 | stop | 1 | 20210316 |
| EPI_ISL_17372638 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2562/2023 | F | 1532 | G | 9 | 20230116 |
| EPI_ISL_15486874 | NSP3 | hCoV-19/Israel/ICH-741189282/2022 | F | 1532 | T | 6 | 20221010 |
| EPI_ISL_18839275 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YKDTA/2024 | F | 1532 | Y | 16 | 20240118 |
| EPI_ISL_18936287 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00129/2023 | F | 1532 | H | 2 | 20230417 |
| EPI_ISL_17500743 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13652/2023 | F | 1532 | C | 8 | 20230321 |
| EPI_ISL_19080337 | NSP3 | hCoV-19/Chongqing/YBCDC-1189/2023 | F | 1532 | S | 17 | 20231013 |
| EPI_ISL_6268670 | NSP3 | hCoV-19/Jordan/Biolab0250/2021 | F | 1532 | D | 6 | 20210715 |
| EPI_ISL_10546970 | NSP3 | hCoV-19/USA/TN-ASC-210603217/2022 | F | 1532 | insstopNstopS | 1 | 20220119 |
| EPI_ISL_11319630 | NSP3 | hCoV-19/Israel/SMC-7045748/2022 | F | 1532 | K | 2 | 20220212 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | F | 1532 | L | 37 | 20230217 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | F | 1532 | del | 155 | 20250209 |
| EPI_ISL_18936171 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00141/2023 | F | 1532 | V | 42 | 20230419 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | F | 1532 | Q | 1 | 20210319 |
| EPI_ISL_2389452 | NSP3 | hCoV-19/Germany/HE-RKI-I-166126/2021 | F | 1533 | stop | 1 | 20210525 |
| EPI_ISL_11326419 | NSP3 | hCoV-19/France/IDF-ChVe-21465903/2021 | F | 1533 | P | 1 | 20211120 |
| EPI_ISL_16258479 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2074/2022 | F | 1533 | H | 7 | 20220812 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | F | 1533 | Q | 9 | 20230217 |
| EPI_ISL_19190405 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-15915/2024 | F | 1533 | C | 313 | 20240307 |
| EPI_ISL_16480818 | NSP3 | hCoV-19/Japan/TKYkbm69710/2022 | F | 1533 | R | 18 | 20221208 |
| EPI_ISL_17500743 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13652/2023 | F | 1533 | N | 3 | 20230321 |
| EPI_ISL_19787719 | NSP3 | hCoV-19/Spain/EX-BA_18678840/2025 | F | 1533 | del | 146 | 20250209 |
| EPI_ISL_11070648 | NSP3 | hCoV-19/Greece/331145/2022 | F | 1533 | I | 13 | 20220207 |
| EPI_ISL_5095420 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702688757_CAM_IZSM_COLLI_TIGEM/2021 | F | 1533 | D | 1 | 20210929 |
| EPI_ISL_8706747 | NSP3 | hCoV-19/England/NEWC-2FD8E8A/2021 | F | 1533 | insWH | 5 | 20211223 |
| EPI_ISL_17530278 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14010/2023 | F | 1533 | Y | 46 | 20230403 |
| EPI_ISL_8188589 | NSP3 | hCoV-19/Nigeria/MRL-OS-3002/2021 | F | 1533 | insF | 5 | 20210511 |
| EPI_ISL_18700692 | NSP3 | hCoV-19/Singapore/R93MR160/2023 | F | 1533 | L | 113 | 20231216 |
| EPI_ISL_3238418 | NSP3 | hCoV-19/Germany/HH-RKI-I-192998/2021 | F | 1533 | K | 2 | 20210725 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | F | 1533 | T | 5 | 20230217 |
| EPI_ISL_2284638 | NSP3 | hCoV-19/South Korea/KDCA3820/2021 | F | 1533 | A | 1 | 20210504 |
| EPI_ISL_19666566 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17321818/2025 | F | 1533 | S | 296 | 20250106 |
| EPI_ISL_1144207 | NSP3 | hCoV-19/Germany/BW-RKI-I-014070/2021 | F | 1533 | insXXX | 1 | 20210126 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | F | 1533 | M | 1 | 20211227 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | F | 1533 | V | 15 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1533 | E | 1 | 20220210 |
| EPI_ISL_17661747 | NSP3 | hCoV-19/Thailand/NIC_TAK_2543/2023 | S | 1534 | C | 26 | 20230509 |
| EPI_ISL_17500665 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13675/2023 | S | 1534 | F | 5 | 20230324 |
| EPI_ISL_19594971 | NSP3 | hCoV-19/Yunnan/YNCDC-2436/2024 | S | 1534 | I | 170 | 20240912 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | S | 1534 | M | 3 | 20230307 |
| EPI_ISL_18168385 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000196444SP/2022 | S | 1534 | A | 57 | 20221128 |
| EPI_ISL_19666566 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17321818/2025 | S | 1534 | G | 450 | 20250106 |
| EPI_ISL_19729127 | NSP3 | hCoV-19/Singapore/Y25R7MSC58/2025 | S | 1534 | R | 302 | 20250205 |
| EPI_ISL_17500679 | NSP3 | hCoV-19/India/MH-ICMR-NIV-232191/2023 | S | 1534 | L | 2 | 20230401 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | S | 1534 | W | 2 | 20211006 |
| EPI_ISL_1167192 | NSP3 | hCoV-19/Egypt/MASRI-C5-020/2020 | S | 1534 | insGFWHI | 1 | 20200913 |
| EPI_ISL_16258472 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1977/2022 | S | 1534 | E | 1 | 20220812 |
| EPI_ISL_17483350 | NSP3 | hCoV-19/Japan/PG-468987/2023 | S | 1534 | T | 86 | 20230324 |
| EPI_ISL_19823312 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4194005/2025 | S | 1534 | N | 789 | 20250324 |
| EPI_ISL_13307898 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2120/2022 | S | 1534 | D | 1 | 20220526 |
| EPI_ISL_17500687 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13850/2023 | S | 1534 | stop | 24 | 20230328 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1534 | K | 13 | 20230108 |
| EPI_ISL_18936185 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00165/2023 | S | 1534 | del | 144 | 20230422 |
| EPI_ISL_19799641 | NSP3 | hCoV-19/USA/TX-HMH-M-147779/2025 | S | 1534 | Q | 82 | 20250315 |
| EPI_ISL_18936286 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00127/2023 | S | 1534 | H | 3 | 20230418 |
| EPI_ISL_17591978 | NSP3 | hCoV-19/Nepal/NPHL-S-2431/2023 | Y | 1535 | R | 2 | 20230312 |
| EPI_ISL_16188057 | NSP3 | hCoV-19/Switzerland/BL-ETHZ-38006991/2022 | Y | 1535 | A | 2 | 20221206 |
| EPI_ISL_18936185 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00165/2023 | Y | 1535 | del | 143 | 20230422 |
| EPI_ISL_19821975 | NSP3 | hCoV-19/USA/PA-CDC-LC1136171/2025 | Y | 1535 | C | 330 | 20250328 |
| EPI_ISL_19799641 | NSP3 | hCoV-19/USA/TX-HMH-M-147779/2025 | Y | 1535 | L | 100 | 20250315 |
| EPI_ISL_18936171 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00141/2023 | Y | 1535 | I | 64 | 20230419 |
| EPI_ISL_10924498 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11820/2022 | Y | 1535 | V | 6 | 20220228 |
| EPI_ISL_16271869 | NSP3 | hCoV-19/USA/LA-OD-O-5509097388/2022 | Y | 1535 | stop | 21 | 20221213 |
| EPI_ISL_18980702 | NSP3 | hCoV-19/USA/TX-HMH-M-139974/2024 | Y | 1535 | S | 8 | 20240224 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | Y | 1535 | N | 132 | 20230217 |
| EPI_ISL_19656460 | NSP3 | hCoV-19/Jordan/MOH-CPHL-4671/2024 | Y | 1535 | F | 35 | 20241219 |
| EPI_ISL_15253095 | NSP3 | hCoV-19/Bahrain/22350038233_S61_L001/2022 | Y | 1535 | K | 4 | 20220518 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | Y | 1535 | G | 2 | 20211228 |
| EPI_ISL_19190405 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-15915/2024 | Y | 1535 | T | 284 | 20240307 |
| EPI_ISL_2775409 | NSP3 | hCoV-19/Brazil/PR-FIOCRUZ-HF163/2021 | Y | 1535 | Q | 2 | 20210302 |
| EPI_ISL_19725499 | NSP3 | hCoV-19/USA/MA-MASPHL-13424/2024 | Y | 1535 | H | 257 | 20241231 |
| EPI_ISL_13422084 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2457/2022 | Y | 1535 | D | 6 | 20220607 |
| EPI_ISL_6978240 | NSP3 | hCoV-19/England/PHEC-3T034T59/2021 | Y | 1535 | insRRLC | 1 | 20211110 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 1535 | M | 8 | 20230217 |
| EPI_ISL_18936288 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00134/2023 | Y | 1535 | insG | 7 | 20230419 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | Y | 1535 | insFYstopstop | 10 | 20230401 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | Y | 1535 | W | 12 | 20230307 |
| EPI_ISL_7135507 | NSP3 | hCoV-19/USA/LA-OD-4020555/2021 | F | 1536 | insW | 1 | 20211118 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | F | 1536 | insYstopstopF | 1 | 20211219 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | F | 1536 | T | 20 | 20221201 |
| EPI_ISL_15387278 | NSP3 | hCoV-19/Morocco/FMP404/2021 | F | 1536 | M | 2 | 20211227 |
| EPI_ISL_17500730 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13612/2023 | F | 1536 | A | 2 | 20230310 |
| EPI_ISL_17500663 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13722/2023 | F | 1536 | L | 61 | 20230331 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | F | 1536 | insIGC | 1 | 20220116 |
| EPI_ISL_18936185 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00165/2023 | F | 1536 | del | 148 | 20230422 |
| EPI_ISL_1703647 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-VOC-170/2020 | F | 1536 | P | 1 | 20201228 |
| EPI_ISL_18936190 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00178/2023 | F | 1536 | H | 3 | 20230424 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | F | 1536 | N | 8 | 20230217 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | F | 1536 | insC | 1 | 20210801 |
| EPI_ISL_3299528 | NSP3 | hCoV-19/Sweden/UUH-000199563181/2021 | F | 1536 | G | 5 | 20210428 |
| EPI_ISL_19656392 | NSP3 | hCoV-19/Jordan/MOH-CPHL-3067/2024 | F | 1536 | stop | 4 | 20240813 |
| EPI_ISL_18936171 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00141/2023 | F | 1536 | Y | 23 | 20230419 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | F | 1536 | C | 13 | 20231226 |
| EPI_ISL_15388887 | NSP3 | hCoV-19/Morocco/FMP427/2022 | F | 1536 | W | 3 | 20220116 |
| EPI_ISL_3299528 | NSP3 | hCoV-19/Sweden/UUH-000199563181/2021 | F | 1536 | insstop | 5 | 20210428 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | F | 1536 | V | 7 | 20230217 |
| EPI_ISL_18924076 | NSP3 | hCoV-19/South Korea/KDCA285192/2024 | F | 1536 | I | 8 | 20240127 |
| EPI_ISL_6810518 | NSP3 | hCoV-19/Pakistan/104044/2021 | F | 1536 | E | 1 | 20210813 |
| EPI_ISL_17500743 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13652/2023 | F | 1536 | S | 21 | 20230321 |
| EPI_ISL_6023063 | NSP3 | hCoV-19/England/PHEC-3P031PDA/2021 | F | 1536 | K | 4 | 20211028 |
| EPI_ISL_2775409 | NSP3 | hCoV-19/Brazil/PR-FIOCRUZ-HF163/2021 | A | 1537 | H | 1 | 20210302 |
| EPI_ISL_17530278 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-14010/2023 | A | 1537 | stop | 3 | 20230403 |
| EPI_ISL_15292744 | NSP3 | hCoV-19/India/GA-NCCS-3055200225777/2021 | A | 1537 | Y | 31 | 20211222 |
| EPI_ISL_1703661 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-123/2021 | A | 1537 | K | 1 | 20210212 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | A | 1537 | R | 1 | 20210716 |
| EPI_ISL_19026222 | NSP3 | hCoV-19/USA/VA-VCUVAS3-ULPZ013134/2024 | A | 1537 | G | 30 | 20240304 |
| EPI_ISL_4117802 | NSP3 | hCoV-19/Thailand/Samut Prakan_SEQ7307/2021 | A | 1537 | F | 2 | 20210824 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | A | 1537 | insTKDEM | 1 | 20210716 |
| EPI_ISL_19799641 | NSP3 | hCoV-19/USA/TX-HMH-M-147779/2025 | A | 1537 | C | 107 | 20250315 |
| EPI_ISL_5887151 | NSP3 | hCoV-19/Thailand/Loei_SEQ19119/2021 | A | 1537 | M | 2 | 20210911 |
| EPI_ISL_18936190 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00178/2023 | A | 1537 | del | 166 | 20230424 |
| EPI_ISL_17721561 | NSP3 | hCoV-19/Italy/LOM-69378124/2023 | A | 1537 | P | 3 | 20230523 |
| EPI_ISL_12308689 | NSP3 | hCoV-19/Russia/KOS-CRIE-7726346439/2022 | A | 1537 | E | 19 | 20220202 |
| EPI_ISL_19783709 | NSP3 | hCoV-19/Ireland/LK-UHL-699718/2025 | A | 1537 | S | 19072 | 20250213 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | A | 1537 | L | 53 | 20230413 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | A | 1537 | N | 25 | 20221201 |
| EPI_ISL_11070648 | NSP3 | hCoV-19/Greece/331145/2022 | A | 1537 | Q | 5 | 20220207 |
| EPI_ISL_19367848 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SHS-111305/2024 | A | 1537 | T | 141 | 20240812 |
| EPI_ISL_19716952 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10028/2025 | A | 1537 | V | 197 | 20250111 |
| EPI_ISL_18936286 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00127/2023 | A | 1537 | I | 7 | 20230418 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | A | 1537 | W | 3 | 20211228 |
| EPI_ISL_19799641 | NSP3 | hCoV-19/USA/TX-HMH-M-147779/2025 | V | 1538 | S | 99 | 20250315 |
| EPI_ISL_17500690 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13689/2023 | V | 1538 | stop | 55 | 20230327 |
| EPI_ISL_19473263 | NSP3 | hCoV-19/USA/OR-CDC-QDX24342726/2024 | V | 1538 | I | 462 | 20240924 |
| EPI_ISL_5232241 | NSP3 | hCoV-19/USA/NC-CDC-ASC210121340/2021 | V | 1538 | insYYLCGLGTPDSYAACTTNKP | 1 | 20210822 |
| EPI_ISL_19783057 | NSP3 | hCoV-19/Japan/FR093-0008/2025 | V | 1538 | insSVQ | 44 | 20250303 |
| EPI_ISL_2383063 | NSP3 | hCoV-19/USA/AZ-ASPHL-2407/2020 | V | 1538 | insIVNFCALESVPTSREP | 1 | 20200804 |
| EPI_ISL_17530292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1727/2023 | V | 1538 | D | 2 | 20230410 |
| EPI_ISL_4186116 | NSP3 | hCoV-19/USA/FL-CDC-ASC210159068/2021 | V | 1538 | insQMRSKWGAAR | 1 | 20210718 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | V | 1538 | Y | 18 | 20221201 |
| EPI_ISL_19824192 | NSP3 | hCoV-19/USA/IL-RIPHL_15496_G/2025 | V | 1538 | L | 151 | 20250318 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | V | 1538 | E | 3 | 20230217 |
| EPI_ISL_6810518 | NSP3 | hCoV-19/Pakistan/104044/2021 | V | 1538 | insSSLH | 1 | 20210813 |
| EPI_ISL_18936190 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00178/2023 | V | 1538 | del | 162 | 20230424 |
| EPI_ISL_18936288 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00134/2023 | V | 1538 | M | 12 | 20230419 |
| EPI_ISL_11938236 | NSP3 | hCoV-19/England/DHSC-CYDJ7CK/2022 | V | 1538 | T | 10 | 20220214 |
| EPI_ISL_18936171 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00141/2023 | V | 1538 | F | 17 | 20230419 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | V | 1538 | insQstop | 1 | 20230217 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | V | 1538 | G | 6 | 20231226 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | V | 1538 | C | 2 | 20230413 |
| EPI_ISL_17956336 | NSP3 | hCoV-19/USA/UT-UPHL-221219823307/2022 | V | 1538 | Q | 2 | 20221122 |
| EPI_ISL_10924499 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11812/2022 | V | 1538 | insLLLEVQIL | 4 | 20220228 |
| EPI_ISL_2445018 | NSP3 | hCoV-19/USA/AZ-ASPHL-2308/2020 | V | 1538 | insPSLVQNTGVMKVTKTKCYPSELTVstop | 1 | 20200721 |
| EPI_ISL_16258472 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1977/2022 | V | 1538 | insLH | 1 | 20220812 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1538 | H | 3 | 20220210 |
| EPI_ISL_18936157 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00100/2023 | V | 1538 | insQECTSSLH | 1 | 20230415 |
| EPI_ISL_19824781 | NSP3 | hCoV-19/France/ARA-HCL025053030601/2025 | V | 1538 | A | 254 | 20250329 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | V | 1538 | W | 1 | 20210420 |
| EPI_ISL_16394775 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2460/2022 | H | 1539 | insstopVFLC | 2 | 20221207 |
| EPI_ISL_2775409 | NSP3 | hCoV-19/Brazil/PR-FIOCRUZ-HF163/2021 | H | 1539 | V | 1 | 20210302 |
| EPI_ISL_19716756 | NSP3 | hCoV-19/USA/NJ-CDC-LC1129893/2025 | H | 1539 | Y | 2648 | 20250122 |
| EPI_ISL_19656460 | NSP3 | hCoV-19/Jordan/MOH-CPHL-4671/2024 | H | 1539 | G | 11 | 20241219 |
| EPI_ISL_15292744 | NSP3 | hCoV-19/India/GA-NCCS-3055200225777/2021 | H | 1539 | stop | 28 | 20211222 |
| EPI_ISL_19092789 | NSP3 | hCoV-19/South Korea/KDCA291999/2024 | H | 1539 | N | 29 | 20240405 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | H | 1539 | L | 3 | 20240627 |
| EPI_ISL_11070648 | NSP3 | hCoV-19/Greece/331145/2022 | H | 1539 | A | 2 | 20220207 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | H | 1539 | insstopV | 2 | 20220203 |
| EPI_ISL_2650481 | NSP3 | hCoV-19/Poland/ZGS_1.147.21/2021 | H | 1539 | M | 1 | 20210121 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 1539 | K | 1 | 20220210 |
| EPI_ISL_18936185 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00165/2023 | H | 1539 | del | 155 | 20230422 |
| EPI_ISL_19799641 | NSP3 | hCoV-19/USA/TX-HMH-M-147779/2025 | H | 1539 | T | 97 | 20250315 |
| EPI_ISL_17530292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1727/2023 | H | 1539 | W | 3 | 20230410 |
| EPI_ISL_13961933 | NSP3 | hCoV-19/Morocco/FMP424/2021 | H | 1539 | I | 6 | 20211228 |
| EPI_ISL_19594514 | NSP3 | hCoV-19/Yunnan/YNCDC-2380/2024 | H | 1539 | R | 80 | 20240827 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | H | 1539 | S | 6 | 20230217 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | H | 1539 | Q | 63 | 20231226 |
| EPI_ISL_11938236 | NSP3 | hCoV-19/England/DHSC-CYDJ7CK/2022 | H | 1539 | F | 8 | 20220214 |
| EPI_ISL_8193624 | NSP3 | hCoV-19/Egypt/NRC-5521NS/2020 | H | 1539 | D | 1 | 20200601 |
| EPI_ISL_1051641 | NSP3 | hCoV-19/England/OXON-F61F5C/2021 | H | 1539 | insMYI | 1 | 20210129 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | H | 1539 | insLLVILGLCGstopstop | 1 | 20210806 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | H | 1539 | P | 1 | 20201214 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | F | 1540 | M | 3 | 20230217 |
| EPI_ISL_19454263 | NSP3 | hCoV-19/USA/NY-PRL-240925_83C12/2024 | F | 1540 | L | 111 | 20240905 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | F | 1540 | C | 4 | 20231226 |
| EPI_ISL_18831357 | NSP3 | hCoV-19/Spain/EX-BA_18618914/2024 | F | 1540 | S | 6 | 20240117 |
| EPI_ISL_18936185 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00165/2023 | F | 1540 | del | 158 | 20230422 |
| EPI_ISL_1704287 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-VOC-650/2020 | F | 1540 | W | 1 | 20201130 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | F | 1540 | I | 16 | 20240627 |
| EPI_ISL_16394775 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2460/2022 | F | 1540 | T | 3 | 20221207 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | F | 1540 | insYstopstopFLAYV | 1 | 20210809 |
| EPI_ISL_19344772 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJJ9A/2024 | F | 1540 | V | 85 | 20240804 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | F | 1540 | Q | 2 | 20230217 |
| EPI_ISL_16258497 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2068/2022 | F | 1540 | insN | 1 | 20220731 |
| EPI_ISL_11070648 | NSP3 | hCoV-19/Greece/331145/2022 | F | 1540 | P | 3 | 20220207 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | F | 1540 | A | 4 | 20230217 |
| EPI_ISL_10299165 | NSP3 | hCoV-19/USA/TN-ASC-210600649/2022 | F | 1540 | insLGNKPTNFRSLVD | 1 | 20220114 |
| EPI_ISL_18936171 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00141/2023 | F | 1540 | stop | 7 | 20230419 |
| EPI_ISL_16258497 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2068/2022 | F | 1540 | N | 2 | 20220731 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | F | 1540 | Y | 26 | 20240205 |
| EPI_ISL_1703886 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-254/2021 | F | 1540 | K | 1 | 20210216 |
| EPI_ISL_449800 | NSP3 | hCoV-19/Chile/RM-35304/2020 | F | 1540 | D | 1 | 20200401 |
| EPI_ISL_16575128 | NSP3 | hCoV-19/USA/LA-OD-O-0188905074/2023 | I | 1541 | insFLCT | 2 | 20230104 |
| EPI_ISL_19656460 | NSP3 | hCoV-19/Jordan/MOH-CPHL-4671/2024 | I | 1541 | del | 180 | 20241219 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | I | 1541 | Y | 5 | 20210809 |
| EPI_ISL_16197493 | NSP3 | hCoV-19/Italy/LOM-ASST-69240534/2022 | I | 1541 | R | 2 | 20221213 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | I | 1541 | insFstop | 10 | 20221201 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1541 | H | 1 | 20220210 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | I | 1541 | E | 1 | 20230217 |
| EPI_ISL_14448281 | NSP3 | hCoV-19/USA/LA-OD-5297642/2022 | I | 1541 | insFstopMGF | 7 | 20220803 |
| EPI_ISL_17559170 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-46730/2023 | I | 1541 | N | 5 | 20230404 |
| EPI_ISL_18487385 | NSP3 | hCoV-19/Russia/SPE-RII-MH146925S/2023 | I | 1541 | S | 63 | 20231018 |
| EPI_ISL_16528837 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12944/2022 | I | 1541 | F | 19 | 20221228 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | I | 1541 | L | 50 | 20240627 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | I | 1541 | C | 2 | 20230213 |
| EPI_ISL_19771508 | NSP3 | hCoV-19/USA/NY-PRL-250304_81E09/2025 | I | 1541 | V | 1038 | 20250225 |
| EPI_ISL_17530292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1727/2023 | I | 1541 | Q | 2 | 20230410 |
| EPI_ISL_8804008 | NSP3 | hCoV-19/India/GA-NCCS-212010080/2021 | I | 1541 | A | 7 | 20210720 |
| EPI_ISL_17956336 | NSP3 | hCoV-19/USA/UT-UPHL-221219823307/2022 | I | 1541 | M | 3 | 20221122 |
| EPI_ISL_19716952 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10028/2025 | I | 1541 | T | 455 | 20250111 |
| EPI_ISL_19334600 | NSP3 | hCoV-19/Egypt/CPHL-EGY24146/2024 | S | 1542 | G | 129 | 20240623 |
| EPI_ISL_19656460 | NSP3 | hCoV-19/Jordan/MOH-CPHL-4671/2024 | S | 1542 | del | 176 | 20241219 |
| EPI_ISL_14366959 | NSP3 | hCoV-19/India/MH-NCCS-C254921/2021 | S | 1542 | Y | 1 | 20211231 |
| EPI_ISL_15386289 | NSP3 | hCoV-19/Morocco/FMP388/2021 | S | 1542 | F | 5 | 20211227 |
| EPI_ISL_13661843 | NSP3 | hCoV-19/Spain/MD-HULP-061213331/2022 | S | 1542 | R | 7 | 20220606 |
| EPI_ISL_19772108 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10706/2025 | S | 1542 | N | 459 | 20250210 |
| EPI_ISL_19771508 | NSP3 | hCoV-19/USA/NY-PRL-250304_81E09/2025 | S | 1542 | C | 46 | 20250225 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | S | 1542 | P | 1 | 20230217 |
| EPI_ISL_15292744 | NSP3 | hCoV-19/India/GA-NCCS-3055200225777/2021 | S | 1542 | A | 31 | 20211222 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | S | 1542 | K | 5 | 20240205 |
| EPI_ISL_18936190 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00178/2023 | S | 1542 | M | 18 | 20230424 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | S | 1542 | L | 5 | 20230213 |
| EPI_ISL_16861207 | NSP3 | hCoV-19/USA/NY-CDC-LC1002331/2023 | S | 1542 | T | 8 | 20230127 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | S | 1542 | V | 3 | 20220104 |
| EPI_ISL_8805668 | NSP3 | hCoV-19/India/GA-NCCS-C27144/2021 | S | 1542 | stop | 3 | 20210913 |
| EPI_ISL_19244766 | NSP3 | hCoV-19/Germany/BB-RKI-I-1143758/2024 | S | 1542 | I | 78 | 20240614 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | S | 1542 | Q | 3 | 20230307 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | N | 1543 | G | 10 | 20221201 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | N | 1543 | H | 1 | 20211006 |
| EPI_ISL_11070648 | NSP3 | hCoV-19/Greece/331145/2022 | N | 1543 | A | 2 | 20220207 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | N | 1543 | W | 5 | 20240205 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | N | 1543 | E | 1 | 20230213 |
| EPI_ISL_16528837 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12944/2022 | N | 1543 | L | 12 | 20221228 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | N | 1543 | stop | 3 | 20210809 |
| EPI_ISL_17724834 | NSP3 | hCoV-19/Singapore/R34MR29/2023 | N | 1543 | B | 7 | 20230518 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1543 | P | 7 | 20230108 |
| EPI_ISL_9139436 | NSP3 | hCoV-19/Netherlands/NB-MVD-CWGS2200349/2022 | N | 1543 | F | 3 | 20220109 |
| EPI_ISL_19309674 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y8X9R/2024 | N | 1543 | Y | 13 | 20240722 |
| EPI_ISL_19334600 | NSP3 | hCoV-19/Egypt/CPHL-EGY24146/2024 | N | 1543 | del | 183 | 20240623 |
| EPI_ISL_16318530 | NSP3 | hCoV-19/USA/FL-CDC-QDX44485171/2022 | N | 1543 | D | 2 | 20221209 |
| EPI_ISL_19326359 | NSP3 | hCoV-19/Mexico/CMX-INER-INMEGEN-3092/2024 | N | 1543 | K | 5209 | 20240624 |
| EPI_ISL_19681133 | NSP3 | hCoV-19/England/CLIMB-CM7YKUI6/2025 | N | 1543 | S | 446 | 20250102 |
| EPI_ISL_16619642 | NSP3 | hCoV-19/USA/AZ-ASU97708/2023 | N | 1543 | I | 5 | 20230102 |
| EPI_ISL_18937512 | NSP3 | hCoV-19/USA/CA-GBW-H20-362-0301/2024 | N | 1543 | T | 27 | 20240207 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | N | 1543 | insstopSCTNGPDF | 11 | 20230401 |
| EPI_ISL_17530292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1727/2023 | N | 1543 | C | 10 | 20230410 |
| EPI_ISL_11954409 | NSP3 | hCoV-19/England/DHSC-CYYPYWT/2021 | N | 1543 | Q | 3 | 20211220 |
| EPI_ISL_18936197 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00038/2023 | S | 1544 | H | 2 | 20230408 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | S | 1544 | V | 3 | 20230217 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | S | 1544 | E | 3 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1544 | Q | 39 | 20220210 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | S | 1544 | stop | 3 | 20230117 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1544 | R | 7 | 20230108 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | S | 1544 | A | 7 | 20231226 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | S | 1544 | del | 154 | 20240627 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | S | 1544 | K | 3 | 20230418 |
| EPI_ISL_8517239 | NSP3 | hCoV-19/England/PHEC-3Z079Z56/2021 | S | 1544 | D | 1 | 20211214 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | S | 1544 | P | 9 | 20240205 |
| EPI_ISL_17821695 | NSP3 | hCoV-19/Brazil/RS-LMM74101/2022 | S | 1544 | I | 4 | 20221220 |
| EPI_ISL_17425883 | NSP3 | hCoV-19/India/MH-CSIR-2928/2023 | S | 1544 | insIIT | 1 | 20230401 |
| EPI_ISL_15116772 | NSP3 | hCoV-19/Chile/LL-106319/2022 | S | 1544 | L | 4 | 20220829 |
| EPI_ISL_19656460 | NSP3 | hCoV-19/Jordan/MOH-CPHL-4671/2024 | S | 1544 | M | 13 | 20241219 |
| EPI_ISL_19620714 | NSP3 | hCoV-19/Canada/ON-PHL-202424437/2024 | S | 1544 | F | 48 | 20241207 |
| EPI_ISL_17664534 | NSP3 | hCoV-19/Sichuan/YBCDC-XGCX174/2023 | S | 1544 | T | 5 | 20230503 |
| EPI_ISL_15253318 | NSP3 | hCoV-19/Bahrain/22970194225_S4_L001/2022 | S | 1544 | Y | 26 | 20220506 |
| EPI_ISL_18936190 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00178/2023 | S | 1544 | G | 16 | 20230424 |
| EPI_ISL_17530292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1727/2023 | S | 1544 | N | 2 | 20230410 |
| EPI_ISL_1034182 | NSP3 | hCoV-19/India/GA-NIV-VOC-153/2020 | S | 1544 | insRstop | 1 | 20201226 |
| EPI_ISL_19110817 | NSP3 | hCoV-19/Japan/PG-600141/2024 | S | 1544 | C | 7 | 20240208 |
| EPI_ISL_18532517 | NSP3 | hCoV-19/USA/UT-CDC-QDX86356417/2023 | W | 1545 | C | 42 | 20231010 |
| EPI_ISL_19656460 | NSP3 | hCoV-19/Jordan/MOH-CPHL-4671/2024 | W | 1545 | Y | 68 | 20241219 |
| EPI_ISL_14211279 | NSP3 | hCoV-19/South Africa/NCV1636/2022 | W | 1545 | R | 13 | 20220611 |
| EPI_ISL_18720568 | NSP3 | hCoV-19/Australia/WA15671/2023 | W | 1545 | L | 422 | 20231124 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | W | 1545 | F | 17 | 20230108 |
| EPI_ISL_11355421 | NSP3 | hCoV-19/France/GES-ChNa-210059857801/2021 | W | 1545 | I | 6 | 20210719 |
| EPI_ISL_17821695 | NSP3 | hCoV-19/Brazil/RS-LMM74101/2022 | W | 1545 | T | 4 | 20221220 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | W | 1545 | del | 145 | 20240627 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | W | 1545 | insPRF | 2 | 20211015 |
| EPI_ISL_18936197 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00038/2023 | W | 1545 | A | 2 | 20230408 |
| EPI_ISL_19340810 | NSP3 | hCoV-19/South Korea/KDCA294072/2024 | W | 1545 | stop | 6 | 20240722 |
| EPI_ISL_19499592 | NSP3 | hCoV-19/USA/TX-HMH-M-146199/2024 | W | 1545 | G | 7 | 20240910 |
| EPI_ISL_15116772 | NSP3 | hCoV-19/Chile/LL-106319/2022 | W | 1545 | V | 4 | 20220829 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | W | 1545 | insGstopN | 11 | 20230401 |
| EPI_ISL_18936190 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00178/2023 | W | 1545 | K | 9 | 20230424 |
| EPI_ISL_11941506 | NSP3 | hCoV-19/England/DHSC-CYDUU11/2022 | W | 1545 | S | 2 | 20220208 |
| EPI_ISL_16197493 | NSP3 | hCoV-19/Italy/LOM-ASST-69240534/2022 | W | 1545 | E | 2 | 20221213 |
| EPI_ISL_427289 | NSP3 | hCoV-19/USA/OH-OSUP0014/2020 | W | 1545 | insCYstopIRHstopC | 1 | 20200331 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | W | 1545 | insQKRGG | 1 | 20230401 |
| EPI_ISL_11769907 | NSP3 | hCoV-19/England/LSPA-3CDC8D3/2022 | W | 1545 | M | 3 | 20220329 |
| EPI_ISL_17372590 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2627/2023 | W | 1545 | N | 11 | 20230117 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | W | 1545 | Q | 1 | 20230217 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | L | 1546 | A | 1 | 20210420 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | L | 1546 | Y | 10 | 20240205 |
| EPI_ISL_16528837 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12944/2022 | L | 1546 | S | 9 | 20221228 |
| EPI_ISL_18936190 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00178/2023 | L | 1546 | V | 24 | 20230424 |
| EPI_ISL_18965525 | NSP3 | hCoV-19/USA/DC-CDC-2-7643829/2024 | L | 1546 | I | 282 | 20240108 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1546 | N | 3 | 20220210 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | L | 1546 | C | 10 | 20221201 |
| EPI_ISL_16937000 | NSP3 | hCoV-19/USA/TX-PHH-23V-026G0442/2023 | L | 1546 | J | 6 | 20230126 |
| EPI_ISL_19802278 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10969/2025 | L | 1546 | F | 739 | 20250314 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | L | 1546 | del | 127 | 20240627 |
| EPI_ISL_12456986 | NSP3 | hCoV-19/Israel/ICH-741221698/2022 | L | 1546 | P | 5 | 20220421 |
| EPI_ISL_5049885 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649453/2021 | L | 1546 | insSCRVVFGIYSFHstop | 1 | 20210802 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 1546 | Q | 10 | 20230108 |
| EPI_ISL_9196489 | NSP3 | hCoV-19/Nigeria/PHR-LA-029/2021 | L | 1546 | H | 12 | 20211129 |
| EPI_ISL_18736013 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69557609/2023 | L | 1546 | R | 6 | 20231226 |
| EPI_ISL_15386289 | NSP3 | hCoV-19/Morocco/FMP388/2021 | L | 1546 | W | 1 | 20211227 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | M | 1547 | H | 12 | 20230401 |
| EPI_ISL_19729339 | NSP3 | hCoV-19/England/CLIMB-CM7YRZIQ/2025 | M | 1547 | V | 1729 | 20250124 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | M | 1547 | insVNNstopSCTNGPDFSYGstopNVH | 1 | 20230401 |
| EPI_ISL_11887284 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0588/2021 | M | 1547 | A | 5 | 20211222 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | M | 1547 | Y | 1 | 20211006 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | M | 1547 | F | 12 | 20221201 |
| EPI_ISL_17530292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1727/2023 | M | 1547 | S | 7 | 20230410 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | M | 1547 | del | 131 | 20240627 |
| EPI_ISL_19545112 | NSP3 | hCoV-19/USA/MN-MDH-44036/2024 | M | 1547 | T | 196 | 20241027 |
| EPI_ISL_15388687 | NSP3 | hCoV-19/Morocco/FMP418/2022 | M | 1547 | P | 1 | 20220118 |
| EPI_ISL_1379950 | NSP3 | hCoV-19/Turkey/HSGM-1274/2021 | M | 1547 | insL | 1 | 20210113 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | M | 1547 | K | 8 | 20210807 |
| EPI_ISL_19334600 | NSP3 | hCoV-19/Egypt/CPHL-EGY24146/2024 | M | 1547 | C | 5 | 20240623 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 1547 | G | 2 | 20220210 |
| EPI_ISL_16197493 | NSP3 | hCoV-19/Italy/LOM-ASST-69240534/2022 | M | 1547 | R | 6 | 20221213 |
| EPI_ISL_19656460 | NSP3 | hCoV-19/Jordan/MOH-CPHL-4671/2024 | M | 1547 | D | 18 | 20241219 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | M | 1547 | N | 1 | 20201214 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | M | 1547 | Q | 8 | 20230217 |
| EPI_ISL_8517239 | NSP3 | hCoV-19/England/PHEC-3Z079Z56/2021 | M | 1547 | insSCNC | 1 | 20211214 |
| EPI_ISL_19507696 | NSP3 | hCoV-19/Italy/LOM-UNIBS-10149703/2024 | M | 1547 | L | 75 | 20240925 |
| EPI_ISL_17821695 | NSP3 | hCoV-19/Brazil/RS-LMM74101/2022 | M | 1547 | W | 1 | 20221220 |
| EPI_ISL_19818381 | NSP3 | hCoV-19/France/GES-RELAB-IPP03717/2025 | M | 1547 | I | 6440 | 20250314 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | W | 1548 | insYstopNVHL | 1 | 20220117 |
| EPI_ISL_16258578 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2047/2022 | W | 1548 | stop | 17 | 20220728 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | W | 1548 | T | 4 | 20220210 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | W | 1548 | F | 5 | 20230217 |
| EPI_ISL_19334600 | NSP3 | hCoV-19/Egypt/CPHL-EGY24146/2024 | W | 1548 | G | 7 | 20240623 |
| EPI_ISL_17530292 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1727/2023 | W | 1548 | A | 6 | 20230410 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | W | 1548 | H | 1 | 20220110 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | W | 1548 | V | 1 | 20210806 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | W | 1548 | del | 134 | 20240627 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | W | 1548 | insstopstop | 1 | 20210806 |
| EPI_ISL_18993003 | NSP3 | hCoV-19/USA/UT-UPHL-240207782230/2024 | W | 1548 | R | 11 | 20240203 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | W | 1548 | insK | 1 | 20200721 |
| EPI_ISL_11946434 | NSP3 | hCoV-19/England/DHSC-CYNHCBM/2022 | W | 1548 | S | 3 | 20220215 |
| EPI_ISL_19411051 | NSP3 | hCoV-19/Italy/LAZ-IFO-2409033077/2024 | W | 1548 | C | 29 | 20240801 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | W | 1548 | K | 9 | 20230418 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | W | 1548 | E | 1 | 20220302 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | W | 1548 | Y | 23 | 20230217 |
| EPI_ISL_18491208 | NSP3 | hCoV-19/Greece/9084/2023 | W | 1548 | L | 71 | 20230915 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | L | 1549 | C | 2 | 20220302 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | L | 1549 | del | 78 | 20240627 |
| EPI_ISL_18936160 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00108/2023 | L | 1549 | H | 1 | 20230417 |
| EPI_ISL_11336445 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0645/2021 | L | 1549 | E | 2 | 20211220 |
| EPI_ISL_17815958 | NSP3 | hCoV-19/Singapore/R41MR183/2023 | L | 1549 | J | 3 | 20230614 |
| EPI_ISL_19382855 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08016/2024 | L | 1549 | S | 40 | 20240808 |
| EPI_ISL_18936172 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00143/2023 | L | 1549 | insG | 1 | 20230420 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | L | 1549 | T | 1 | 20230217 |
| EPI_ISL_19334600 | NSP3 | hCoV-19/Egypt/CPHL-EGY24146/2024 | L | 1549 | stop | 56 | 20240623 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | L | 1549 | A | 1 | 20210424 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | L | 1549 | insQSCNCFSA | 1 | 20210801 |
| EPI_ISL_18370801 | NSP3 | hCoV-19/env/Germany/BY-LGL-6021077/2023 | L | 1549 | V | 57 | 20230925 |
| EPI_ISL_18936172 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00143/2023 | L | 1549 | I | 23 | 20230420 |
| EPI_ISL_17500678 | NSP3 | hCoV-19/India/MH-ICMR-NIV-232214/2023 | L | 1549 | K | 16 | 20230403 |
| EPI_ISL_16528837 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-12944/2022 | L | 1549 | insE | 2 | 20221228 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | L | 1549 | P | 5 | 20230307 |
| EPI_ISL_15388687 | NSP3 | hCoV-19/Morocco/FMP418/2022 | L | 1549 | Q | 1 | 20220118 |
| EPI_ISL_18722632 | NSP3 | hCoV-19/USA/NM-NMDOH-2023048086/2023 | L | 1549 | F | 20 | 20231106 |
| EPI_ISL_18936190 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00178/2023 | L | 1549 | M | 9 | 20230424 |
| EPI_ISL_7509709 | NSP3 | hCoV-19/USA/CA-CSMC599/2020 | L | 1549 | insQSCNCFSAIL | 1 | 20201023 |
| EPI_ISL_1533775 | NSP3 | hCoV-19/India/MH-NCCS-CHN21025955/2021 | L | 1549 | insGF | 1 | 20210221 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1549 | Y | 29 | 20220210 |
| EPI_ISL_5049885 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1649453/2021 | L | 1549 | insstop | 1 | 20210802 |
| EPI_ISL_14448281 | NSP3 | hCoV-19/USA/LA-OD-5297642/2022 | L | 1549 | R | 6 | 20220803 |
| EPI_ISL_19311901 | NSP3 | hCoV-19/Singapore/R46MQ19/2024 | I | 1550 | L | 145 | 20240725 |
| EPI_ISL_19735541 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56360/2025 | I | 1550 | V | 351 | 20250205 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1550 | E | 1 | 20220210 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | I | 1550 | S | 8 | 20230217 |
| EPI_ISL_19739684 | NSP3 | hCoV-19/Brazil/BA-LACENBA-294198198/2025 | I | 1550 | T | 602 | 20250108 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | I | 1550 | insC | 1 | 20220110 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | I | 1550 | F | 5 | 20230106 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | I | 1550 | Q | 1 | 20240801 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | I | 1550 | insVFGIYSFHstop | 3 | 20220324 |
| EPI_ISL_19334606 | NSP3 | hCoV-19/Egypt/CPHL-EGY24172/2024 | I | 1550 | del | 92 | 20240627 |
| EPI_ISL_16258488 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2003/2022 | I | 1550 | stop | 1 | 20220815 |
| EPI_ISL_15003403 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1248/2021 | I | 1550 | N | 1 | 20210929 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | I | 1550 | G | 5 | 20240205 |
| EPI_ISL_16271866 | NSP3 | hCoV-19/USA/LA-OD-O-8231146503/2022 | I | 1550 | D | 1 | 20221213 |
| EPI_ISL_14997814 | NSP3 | hCoV-19/Finland/THL-2218476/2022 | I | 1550 | R | 4 | 20220826 |
| EPI_ISL_1034182 | NSP3 | hCoV-19/India/GA-NIV-VOC-153/2020 | I | 1550 | Y | 1 | 20201226 |
| EPI_ISL_16197493 | NSP3 | hCoV-19/Italy/LOM-ASST-69240534/2022 | I | 1550 | K | 6 | 20221213 |
| EPI_ISL_19223104 | NSP3 | hCoV-19/USA/CA-CDPH-500137736/2024 | I | 1550 | M | 119 | 20240515 |
| EPI_ISL_13891883 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-105807/2022 | I | 1550 | insK | 3 | 20220708 |
| EPI_ISL_5484593 | NSP3 | hCoV-19/England/PHEC-3M0A7MB3/2021 | I | 1550 | W | 1 | 20211016 |
| EPI_ISL_17821695 | NSP3 | hCoV-19/Brazil/RS-LMM74101/2022 | I | 1550 | J | 4 | 20221220 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | I | 1550 | C | 20 | 20230401 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | I | 1550 | insRWCCLstopTSCstopstop | 1 | 20230106 |
| EPI_ISL_14584695 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16380/2022 | I | 1551 | N | 6 | 20220725 |
| EPI_ISL_4315327 | NSP3 | hCoV-19/Wales/PHWC-PDTP7A/2021 | I | 1551 | J | 2 | 20210905 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | I | 1551 | F | 26 | 20240205 |
| EPI_ISL_19656460 | NSP3 | hCoV-19/Jordan/MOH-CPHL-4671/2024 | I | 1551 | del | 90 | 20241219 |
| EPI_ISL_16197493 | NSP3 | hCoV-19/Italy/LOM-ASST-69240534/2022 | I | 1551 | M | 8 | 20221213 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | I | 1551 | C | 10 | 20221201 |
| EPI_ISL_13861069 | NSP3 | hCoV-19/Chile/MA-82958/2022 | I | 1551 | W | 1 | 20220626 |
| EPI_ISL_19292043 | NSP3 | hCoV-19/Wales/CLIMB-CM7YMAJJ/2024 | I | 1551 | L | 66 | 20240715 |
| EPI_ISL_18454303 | NSP3 | hCoV-19/Thailand/NIC_BKK_8207/2023 | I | 1551 | S | 8 | 20231021 |
| EPI_ISL_5484593 | NSP3 | hCoV-19/England/PHEC-3M0A7MB3/2021 | I | 1551 | P | 1 | 20211016 |
| EPI_ISL_18936190 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00178/2023 | I | 1551 | stop | 8 | 20230424 |
| EPI_ISL_19029433 | NSP3 | hCoV-19/USA/CO-CDPHE-41781703/2024 | I | 1551 | V | 133 | 20240312 |
| EPI_ISL_16394806 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2491/2022 | I | 1551 | A | 2 | 20221225 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | I | 1551 | insF | 1 | 20210520 |
| EPI_ISL_17367971 | NSP3 | hCoV-19/Brazil/BA-LACEN-BA3640-292907674/2023 | I | 1551 | T | 9 | 20230315 |
| EPI_ISL_17275295 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45820/2023 | I | 1551 | R | 1 | 20230217 |
| EPI_ISL_11415720 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC87LAMS/2022 | I | 1551 | K | 2 | 20220131 |
| EPI_ISL_16394806 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2491/2022 | N | 1552 | stop | 1 | 20221225 |
| EPI_ISL_19261165 | NSP3 | hCoV-19/Singapore/R37MQ69/2024 | N | 1552 | B | 3 | 20240603 |
| EPI_ISL_19096323 | NSP3 | hCoV-19/mink/Spain/CV-R_002990-21-01/2021 | N | 1552 | P | 1 | 20211011 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | N | 1552 | E | 2 | 20230217 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | N | 1552 | insstopS | 2 | 20210812 |
| EPI_ISL_18887352 | NSP3 | hCoV-19/USA/CT-Yale-25506/2024 | N | 1552 | K | 132 | 20240118 |
| EPI_ISL_16368078 | NSP3 | hCoV-19/France/ARA-LBZCentre-OL221205079/2022 | N | 1552 | H | 3 | 20221205 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | N | 1552 | G | 47 | 20220812 |
| EPI_ISL_19589242 | NSP3 | hCoV-19/USA/NY-NYULH-21411/2024 | N | 1552 | S | 227 | 20241107 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | N | 1552 | V | 8 | 20230217 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | N | 1552 | insNstopS | 1 | 20210803 |
| EPI_ISL_16437117 | NSP3 | hCoV-19/Italy/EMR_AUSLRomagna_C001-23-10/2023 | N | 1552 | Y | 6 | 20230102 |
| EPI_ISL_18062806 | NSP3 | hCoV-19/Uganda/UVRI_460985/2023 | N | 1552 | I | 29 | 20230523 |
| EPI_ISL_15292744 | NSP3 | hCoV-19/India/GA-NCCS-3055200225777/2021 | N | 1552 | insNstop | 22 | 20211222 |
| EPI_ISL_18454303 | NSP3 | hCoV-19/Thailand/NIC_BKK_8207/2023 | N | 1552 | L | 2 | 20231021 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | N | 1552 | del | 91 | 20240801 |
| EPI_ISL_17372606 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2610/2023 | N | 1552 | Q | 3 | 20230106 |
| EPI_ISL_19348696 | NSP3 | hCoV-19/Morocco/22/2020 | N | 1552 | C | 1 | 20201101 |
| EPI_ISL_19704451 | NSP3 | hCoV-19/Switzerland/un-SNRCI-HUG-46667688/2024 | N | 1552 | T | 25 | 20241209 |
| EPI_ISL_14448281 | NSP3 | hCoV-19/USA/LA-OD-5297642/2022 | N | 1552 | F | 6 | 20220803 |
| EPI_ISL_17275295 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45820/2023 | N | 1552 | R | 16 | 20230217 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | N | 1552 | A | 6 | 20230307 |
| EPI_ISL_8882815 | NSP3 | hCoV-19/India/GA-NCCS-VH78747/2021 | N | 1552 | insstop | 2 | 20210629 |
| EPI_ISL_7650442 | NSP3 | hCoV-19/USA/CA-HLX-ATM-SFHK9UUNH/2021 | N | 1552 | D | 4 | 20211104 |
| EPI_ISL_18840295 | NSP3 | hCoV-19/env/Ukraine/80828/2023 | L | 1553 | P | 7 | 20231012 |
| EPI_ISL_14448281 | NSP3 | hCoV-19/USA/LA-OD-5297642/2022 | L | 1553 | G | 2 | 20220803 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | L | 1553 | insDMLTYNKV | 1 | 20230424 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | L | 1553 | del | 95 | 20240801 |
| EPI_ISL_8804008 | NSP3 | hCoV-19/India/GA-NCCS-212010080/2021 | L | 1553 | insCGstopstopL | 1 | 20210720 |
| EPI_ISL_11415720 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC87LAMS/2022 | L | 1553 | A | 1 | 20220131 |
| EPI_ISL_17812982 | NSP3 | hCoV-19/Kuwait/B5-41/2023 | L | 1553 | J | 35 | 20230330 |
| EPI_ISL_12291379 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1113/2022 | L | 1553 | S | 26 | 20220123 |
| EPI_ISL_7509775 | NSP3 | hCoV-19/USA/CA-CSMC669/2020 | L | 1553 | insCGstopstop | 1 | 20200910 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | L | 1553 | insHHF | 1 | 20220302 |
| EPI_ISL_18823586 | NSP3 | hCoV-19/South Korea/KDCA282799/2023 | L | 1553 | H | 4 | 20231228 |
| EPI_ISL_17275295 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45820/2023 | L | 1553 | C | 7 | 20230217 |
| EPI_ISL_13354886 | NSP3 | hCoV-19/Israel/SMC-7074940/2022 | L | 1553 | insCNNPstopA | 1 | 20220613 |
| EPI_ISL_19325802 | NSP3 | hCoV-19/Uganda/UVRI_468515/2024 | L | 1553 | V | 18 | 20240607 |
| EPI_ISL_7509709 | NSP3 | hCoV-19/USA/CA-CSMC599/2020 | L | 1553 | insCGstopstopLI | 1 | 20201023 |
| EPI_ISL_19680634 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56055/2024 | L | 1553 | F | 831 | 20241209 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | L | 1553 | Y | 1 | 20210801 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | L | 1553 | K | 3 | 20210424 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | L | 1553 | T | 3 | 20210806 |
| EPI_ISL_10302370 | NSP3 | hCoV-19/USA/TN-ASC-210592590/2022 | L | 1553 | insstopT | 1 | 20220114 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | L | 1553 | W | 1 | 20210508 |
| EPI_ISL_17270404 | NSP3 | hCoV-19/Chile/RM-20217/2023 | L | 1553 | M | 4 | 20230307 |
| EPI_ISL_14298166 | NSP3 | hCoV-19/Finland/THL-202215936/2022 | L | 1553 | R | 3 | 20220708 |
| EPI_ISL_19043892 | NSP3 | hCoV-19/Henan/KFCDC0059/2024 | L | 1553 | I | 77 | 20240409 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | V | 1554 | del | 95 | 20240801 |
| EPI_ISL_16258488 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2003/2022 | V | 1554 | Y | 3 | 20220815 |
| EPI_ISL_18936276 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00128/2023 | V | 1554 | Q | 3 | 20230418 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1554 | T | 6 | 20220210 |
| EPI_ISL_19724709 | NSP3 | hCoV-19/Canada/QC-L00840782001/2025 | V | 1554 | A | 67 | 20250203 |
| EPI_ISL_19563158 | NSP3 | hCoV-19/Netherlands/GE-RIVM-143642/2024 | V | 1554 | L | 261 | 20241022 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | V | 1554 | C | 68 | 20220812 |
| EPI_ISL_16027247 | NSP3 | hCoV-19/Indonesia/JI-ITD-59340NT/2022 | V | 1554 | G | 6 | 20221106 |
| EPI_ISL_16197493 | NSP3 | hCoV-19/Italy/LOM-ASST-69240534/2022 | V | 1554 | stop | 1 | 20221213 |
| EPI_ISL_11415720 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC87LAMS/2022 | V | 1554 | P | 1 | 20220131 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | V | 1554 | M | 1 | 20230213 |
| EPI_ISL_19680925 | NSP3 | hCoV-19/Australia/WA16668/2025 | V | 1554 | I | 286 | 20250109 |
| EPI_ISL_18743641 | NSP3 | hCoV-19/USA/TX-HMH-M-136709/2023 | V | 1554 | insLY | 1 | 20231225 |
| EPI_ISL_10858541 | NSP3 | hCoV-19/Turkey/HSGM-G2470/2022 | V | 1554 | E | 2 | 20220217 |
| EPI_ISL_19096323 | NSP3 | hCoV-19/mink/Spain/CV-R_002990-21-01/2021 | V | 1554 | F | 4 | 20211011 |
| EPI_ISL_1533775 | NSP3 | hCoV-19/India/MH-NCCS-CHN21025955/2021 | Q | 1555 | A | 1 | 20210221 |
| EPI_ISL_19801661 | NSP3 | hCoV-19/USA/KY-KSPHL-0036384/2024 | Q | 1555 | H | 701 | 20241124 |
| EPI_ISL_17815826 | NSP3 | hCoV-19/Singapore/R40MR77/2023 | Q | 1555 | stop | 13 | 20230608 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | Q | 1555 | M | 2 | 20220302 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | Q | 1555 | insRL | 1 | 20230217 |
| EPI_ISL_18454303 | NSP3 | hCoV-19/Thailand/NIC_BKK_8207/2023 | Q | 1555 | S | 6 | 20231021 |
| EPI_ISL_19079716 | NSP3 | hCoV-19/South Korea/KDCA291272/2024 | Q | 1555 | R | 131 | 20240327 |
| EPI_ISL_12955537 | NSP3 | hCoV-19/Russia/KAM-CRIE-7730388631/2022 | Q | 1555 | E | 2 | 20220211 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | Q | 1555 | C | 23 | 20230401 |
| EPI_ISL_17061636 | NSP3 | hCoV-19/USA/TX-UTEP-B002476751/2022 | Q | 1555 | P | 30 | 20220510 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1555 | F | 2 | 20220210 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | Q | 1555 | G | 51 | 20230217 |
| EPI_ISL_19220973 | NSP3 | hCoV-19/Spain/EX-BA_18640291/2024 | Q | 1555 | L | 76 | 20240606 |
| EPI_ISL_19701957 | NSP3 | hCoV-19/Canada/ON-PHL-202502327/2025 | Q | 1555 | K | 702 | 20250117 |
| EPI_ISL_19141731 | NSP3 | hCoV-19/USA/NJ-PHEL-V24005176/2024 | Q | 1555 | T | 31 | 20240401 |
| EPI_ISL_999140 | NSP3 | hCoV-19/England/OXON-F568B9/2021 | Q | 1555 | insstopstopL | 1 | 20210114 |
| EPI_ISL_1034182 | NSP3 | hCoV-19/India/GA-NIV-VOC-153/2020 | Q | 1555 | I | 1 | 20201226 |
| EPI_ISL_14448281 | NSP3 | hCoV-19/USA/LA-OD-5297642/2022 | Q | 1555 | Y | 6 | 20220803 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | Q | 1555 | N | 6 | 20230424 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | Q | 1555 | del | 93 | 20240801 |
| EPI_ISL_18972065 | NSP3 | hCoV-19/USA/UT-UPHL-240307759320/2024 | M | 1556 | R | 42 | 20240218 |
| EPI_ISL_19672919 | NSP3 | hCoV-19/USA/CA-CDPH-500145064/2024 | M | 1556 | K | 2359 | 20241201 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | M | 1556 | H | 1 | 20210806 |
| EPI_ISL_19829468 | NSP3 | hCoV-19/Brazil/RR-IEC-011691/2025 | M | 1556 | T | 1465 | 20250312 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | M | 1556 | del | 91 | 20240801 |
| EPI_ISL_19825329 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-23C-MM00038R/2025 | M | 1556 | V | 293 | 20250323 |
| EPI_ISL_17591978 | NSP3 | hCoV-19/Nepal/NPHL-S-2431/2023 | M | 1556 | S | 16 | 20230312 |
| EPI_ISL_18743641 | NSP3 | hCoV-19/USA/TX-HMH-M-136709/2023 | M | 1556 | W | 4 | 20231225 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | M | 1556 | A | 1 | 20210318 |
| EPI_ISL_8804010 | NSP3 | hCoV-19/India/MH-NCCS-2750000365181/2021 | M | 1556 | stop | 39 | 20210712 |
| EPI_ISL_18168385 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000196444SP/2022 | M | 1556 | N | 34 | 20221128 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | M | 1556 | G | 4 | 20210812 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | M | 1556 | Y | 1 | 20220302 |
| EPI_ISL_19662778 | NSP3 | hCoV-19/Singapore/R61MQ19/2024 | M | 1556 | L | 397 | 20241108 |
| EPI_ISL_18936276 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00128/2023 | M | 1556 | C | 2 | 20230418 |
| EPI_ISL_19784061 | NSP3 | hCoV-19/USA/IL-CDC-LC1134638/2025 | M | 1556 | I | 2857 | 20250304 |
| EPI_ISL_14616526 | NSP3 | hCoV-19/France/IDF-AphpSA-ZM000882/2022 | M | 1556 | P | 4 | 20220801 |
| EPI_ISL_13065571 | NSP3 | hCoV-19/Thailand/NIC_BKK_19046/2022 | M | 1556 | Q | 2 | 20220517 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | M | 1556 | F | 1 | 20210520 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | A | 1557 | Y | 3 | 20221225 |
| EPI_ISL_19643486 | NSP3 | hCoV-19/USA/TX-HMH-M-147021/2024 | A | 1557 | P | 11 | 20241202 |
| EPI_ISL_15626172 | NSP3 | hCoV-19/USA/CA-CDPH-FS27888914/2022 | A | 1557 | D | 3 | 20220814 |
| EPI_ISL_19590108 | NSP3 | hCoV-19/Spain/VC-CVA_CAST-126450/2024 | A | 1557 | V | 1145 | 20241001 |
| EPI_ISL_14448281 | NSP3 | hCoV-19/USA/LA-OD-5297642/2022 | A | 1557 | F | 3 | 20220803 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | A | 1557 | I | 4 | 20220324 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | A | 1557 | R | 2 | 20210806 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | A | 1557 | H | 1 | 20210520 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | A | 1557 | del | 106 | 20240801 |
| EPI_ISL_17504986 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00018497_01/2023 | A | 1557 | G | 39 | 20230311 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | A | 1557 | L | 5 | 20210809 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 1557 | K | 2 | 20230217 |
| EPI_ISL_2833850 | NSP3 | hCoV-19/Kuwait/KCCC-95460-3431387/2021 | A | 1557 | insGstopstopL | 1 | 20210628 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | A | 1557 | insILGLCGstopstopLILYKWPL | 1 | 20210801 |
| EPI_ISL_19779701 | NSP3 | hCoV-19/Wales/CLIMB-CM7YEBW7/2025 | A | 1557 | S | 79 | 20250226 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | A | 1557 | E | 25 | 20230401 |
| EPI_ISL_18936276 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00128/2023 | A | 1557 | N | 3 | 20230418 |
| EPI_ISL_19745732 | NSP3 | hCoV-19/USA/NY-SUNYQB-X5977414/2025 | A | 1557 | T | 899 | 20250124 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | A | 1557 | M | 1 | 20210424 |
| EPI_ISL_17591978 | NSP3 | hCoV-19/Nepal/NPHL-S-2431/2023 | A | 1557 | C | 23 | 20230312 |
| EPI_ISL_8804010 | NSP3 | hCoV-19/India/MH-NCCS-2750000365181/2021 | A | 1557 | stop | 39 | 20210712 |
| EPI_ISL_17774479 | NSP3 | hCoV-19/Thailand/NIC_UTI_4606/2023 | P | 1558 | Q | 41 | 20230524 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | P | 1558 | insstopVF | 1 | 20210201 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | P | 1558 | G | 16 | 20240205 |
| EPI_ISL_10834817 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82377/2022 | P | 1558 | E | 8 | 20220117 |
| EPI_ISL_19232980 | NSP3 | hCoV-19/Spain/IB-HUSE-09401/2024 | P | 1558 | T | 7 | 20240529 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | P | 1558 | stop | 3 | 20220126 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | P | 1558 | insRDLGACIDCSARH | 1 | 20230424 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | P | 1558 | del | 103 | 20240801 |
| EPI_ISL_19822352 | NSP3 | hCoV-19/New Zealand/25YA0808/2025 | P | 1558 | L | 469 | 20250324 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | P | 1558 | insD | 2 | 20210812 |
| EPI_ISL_19600040 | NSP3 | hCoV-19/USA/CA-CDPH-6000020754/2024 | P | 1558 | S | 119 | 20240823 |
| EPI_ISL_13891694 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-105494/2022 | P | 1558 | Y | 3 | 20220707 |
| EPI_ISL_10640460 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K036556/2022 | P | 1558 | A | 9 | 20220127 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | P | 1558 | D | 8 | 20230217 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | P | 1558 | K | 26 | 20230401 |
| EPI_ISL_14616526 | NSP3 | hCoV-19/France/IDF-AphpSA-ZM000882/2022 | P | 1558 | V | 4 | 20220801 |
| EPI_ISL_14448281 | NSP3 | hCoV-19/USA/LA-OD-5297642/2022 | P | 1558 | insstopV | 1 | 20220803 |
| EPI_ISL_18936276 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00128/2023 | P | 1558 | C | 4 | 20230418 |
| EPI_ISL_11737574 | NSP3 | hCoV-19/India/KA-SLS-SEQ-10163/2021 | P | 1558 | F | 2 | 20211019 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1558 | M | 2 | 20210318 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | P | 1558 | I | 3 | 20221225 |
| EPI_ISL_18743641 | NSP3 | hCoV-19/USA/TX-HMH-M-136709/2023 | P | 1558 | R | 25 | 20231225 |
| EPI_ISL_17591978 | NSP3 | hCoV-19/Nepal/NPHL-S-2431/2023 | P | 1558 | N | 17 | 20230312 |
| EPI_ISL_14448281 | NSP3 | hCoV-19/USA/LA-OD-5297642/2022 | P | 1558 | H | 5 | 20220803 |
| EPI_ISL_13408159 | NSP3 | hCoV-19/Spain/AS-252226042/2022 | I | 1559 | N | 2 | 20220604 |
| EPI_ISL_7547079 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082421-1072/2021 | I | 1559 | insQLWLEC | 1 | 20210824 |
| EPI_ISL_19348696 | NSP3 | hCoV-19/Morocco/22/2020 | I | 1559 | Y | 2 | 20201101 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1559 | K | 2 | 20220210 |
| EPI_ISL_19803471 | NSP3 | hCoV-19/USA/WI-WSLH-2500974/2025 | I | 1559 | T | 529 | 20250305 |
| EPI_ISL_18743641 | NSP3 | hCoV-19/USA/TX-HMH-M-136709/2023 | I | 1559 | F | 30 | 20231225 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | I | 1559 | del | 106 | 20240801 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | I | 1559 | stop | 7 | 20230217 |
| EPI_ISL_951357 | NSP3 | hCoV-19/England/OXON-F53175/2021 | I | 1559 | Q | 1 | 20210115 |
| EPI_ISL_18651407 | NSP3 | hCoV-19/USA/IA-SHL-2374646/2023 | I | 1559 | S | 17 | 20231211 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | I | 1559 | D | 3 | 20220825 |
| EPI_ISL_12321574 | NSP3 | hCoV-19/Turkey/HSGM-GS2662/2022 | I | 1559 | A | 1 | 20220405 |
| EPI_ISL_19488142 | NSP3 | hCoV-19/France/BFC-IPP11251/2024 | I | 1559 | V | 441 | 20240930 |
| EPI_ISL_17591978 | NSP3 | hCoV-19/Nepal/NPHL-S-2431/2023 | I | 1559 | C | 25 | 20230312 |
| EPI_ISL_18246785 | NSP3 | hCoV-19/Australia/SA599868/2023 | I | 1559 | M | 31 | 20230831 |
| EPI_ISL_19337803 | NSP3 | hCoV-19/Japan/FR062-0358/2024 | I | 1559 | J | 3 | 20240801 |
| EPI_ISL_19752565 | NSP3 | hCoV-19/USA/MA-BI-22544/2024 | I | 1559 | L | 100 | 20241117 |
| EPI_ISL_12582773 | NSP3 | hCoV-19/Turkey/HSGM-GS1992/2022 | I | 1559 | R | 2 | 20220410 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1559 | E | 1 | 20210318 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | S | 1560 | K | 2 | 20220811 |
| EPI_ISL_19794951 | NSP3 | hCoV-19/Canada/QC-L00853347001/2025 | S | 1560 | P | 974 | 20250310 |
| EPI_ISL_11737569 | NSP3 | hCoV-19/India/KA-SLS-SEQ-10157/2021 | S | 1560 | Y | 2 | 20211019 |
| EPI_ISL_18743641 | NSP3 | hCoV-19/USA/TX-HMH-M-136709/2023 | S | 1560 | Q | 3 | 20231225 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | S | 1560 | stop | 7 | 20230217 |
| EPI_ISL_14616526 | NSP3 | hCoV-19/France/IDF-AphpSA-ZM000882/2022 | S | 1560 | V | 4 | 20220801 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | S | 1560 | del | 141 | 20230424 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | S | 1560 | N | 9 | 20230424 |
| EPI_ISL_17591978 | NSP3 | hCoV-19/Nepal/NPHL-S-2431/2023 | S | 1560 | F | 20 | 20230312 |
| EPI_ISL_19451524 | NSP3 | hCoV-19/Netherlands/UT-RIVM-142031/2024 | S | 1560 | T | 127 | 20240909 |
| EPI_ISL_951357 | NSP3 | hCoV-19/England/OXON-F53175/2021 | S | 1560 | E | 1 | 20210115 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | S | 1560 | I | 4 | 20240205 |
| EPI_ISL_19726359 | NSP3 | hCoV-19/USA/FL-USAFSAM-S23258/2025 | S | 1560 | L | 294 | 20250122 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | S | 1560 | H | 1 | 20220203 |
| EPI_ISL_935060 | NSP3 | hCoV-19/Turkey/HSGM-1378/2021 | S | 1560 | insPIS | 1 | 20210119 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | S | 1560 | M | 2 | 20230217 |
| EPI_ISL_19602279 | NSP3 | hCoV-19/Canada/ON-KHS-05729-v1/2024 | S | 1560 | A | 184 | 20241128 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | S | 1560 | C | 25 | 20230401 |
| EPI_ISL_18407771 | NSP3 | hCoV-19/USA/CA-HLX-STM-WF9GVZFXD/2023 | A | 1561 | S | 130 | 20231003 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1561 | E | 1 | 20220210 |
| EPI_ISL_14616528 | NSP3 | hCoV-19/France/IDF-AphpSA-LK000880/2022 | A | 1561 | N | 3 | 20220723 |
| EPI_ISL_19783524 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YF4XE/2025 | A | 1561 | V | 2682 | 20250303 |
| EPI_ISL_12291379 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1113/2022 | A | 1561 | G | 4 | 20220123 |
| EPI_ISL_16969099 | NSP3 | hCoV-19/England/BRBR-326CACD2/2023 | A | 1561 | P | 6 | 20230211 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | A | 1561 | del | 134 | 20230424 |
| EPI_ISL_17554784 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0238-LS/2023 | A | 1561 | K | 1 | 20230411 |
| EPI_ISL_11737569 | NSP3 | hCoV-19/India/KA-SLS-SEQ-10157/2021 | A | 1561 | stop | 5 | 20211019 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | A | 1561 | R | 1 | 20210418 |
| EPI_ISL_1533775 | NSP3 | hCoV-19/India/MH-NCCS-CHN21025955/2021 | A | 1561 | I | 1 | 20210221 |
| EPI_ISL_13436469 | NSP3 | hCoV-19/South Africa/CERI-KRISP-K042585/2022 | A | 1561 | D | 4 | 20220105 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | A | 1561 | C | 9 | 20240801 |
| EPI_ISL_18743641 | NSP3 | hCoV-19/USA/TX-HMH-M-136709/2023 | A | 1561 | H | 4 | 20231225 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | A | 1561 | L | 18 | 20230217 |
| EPI_ISL_18831496 | NSP3 | hCoV-19/Pakistan/DUHS-08/2024 | A | 1561 | Y | 6 | 20240111 |
| EPI_ISL_18976494 | NSP3 | hCoV-19/France/IDF-IPP03665/2024 | A | 1561 | T | 107 | 20240219 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | A | 1561 | F | 2 | 20230217 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | M | 1562 | R | 10 | 20220704 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | M | 1562 | S | 13 | 20230108 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | M | 1562 | W | 4 | 20220104 |
| EPI_ISL_17591978 | NSP3 | hCoV-19/Nepal/NPHL-S-2431/2023 | M | 1562 | A | 17 | 20230312 |
| EPI_ISL_11070648 | NSP3 | hCoV-19/Greece/331145/2022 | M | 1562 | F | 4 | 20220207 |
| EPI_ISL_12291339 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1071/2022 | M | 1562 | K | 8 | 20220126 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | M | 1562 | G | 7 | 20210812 |
| EPI_ISL_15316447 | NSP3 | hCoV-19/Pakistan/DGH11995673/2022 | M | 1562 | Y | 5 | 20220825 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | M | 1562 | Q | 1 | 20230424 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | M | 1562 | del | 133 | 20230424 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | M | 1562 | N | 5 | 20240801 |
| EPI_ISL_2833850 | NSP3 | hCoV-19/Kuwait/KCCC-95460-3431387/2021 | M | 1562 | D | 1 | 20210628 |
| EPI_ISL_19602108 | NSP3 | hCoV-19/Sweden/BD-2A96979030000/2024 | M | 1562 | I | 1468 | 20241115 |
| EPI_ISL_14949810 | NSP3 | hCoV-19/Jordan/MOH-CPHL002/2022 | M | 1562 | stop | 1 | 20220725 |
| EPI_ISL_18992614 | NSP3 | hCoV-19/Thailand/CU-A230284/2023 | M | 1562 | T | 29 | 20231214 |
| EPI_ISL_17554784 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0238-LS/2023 | M | 1562 | L | 30 | 20230411 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | M | 1562 | C | 24 | 20230401 |
| EPI_ISL_19440963 | NSP3 | hCoV-19/Poland/WSSEGorzow-24S0170/2024 | M | 1562 | V | 63 | 20240909 |
| EPI_ISL_19341090 | NSP3 | hCoV-19/Jordan/JCDC009/2024 | V | 1563 | C | 31 | 20240801 |
| EPI_ISL_19334602 | NSP3 | hCoV-19/Egypt/CPHL-EGY24153/2024 | V | 1563 | G | 8 | 20240623 |
| EPI_ISL_18782385 | NSP3 | hCoV-19/France/BFC-IPP33240/2023 | V | 1563 | I | 127 | 20231210 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | V | 1563 | del | 122 | 20230424 |
| EPI_ISL_6852429 | NSP3 | hCoV-19/Italy/SIC_ISS_7329/2021 | V | 1563 | N | 1 | 20210201 |
| EPI_ISL_2544195 | NSP3 | hCoV-19/Pakistan/PPHRL-AH57/2021 | V | 1563 | K | 1 | 20210418 |
| EPI_ISL_12291339 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1071/2022 | V | 1563 | M | 3 | 20220126 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | V | 1563 | stop | 7 | 20210812 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | V | 1563 | Q | 2 | 20230213 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | V | 1563 | L | 35 | 20230217 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | V | 1563 | R | 2 | 20230217 |
| EPI_ISL_18058553 | NSP3 | hCoV-19/USA/UT-UPHL-230627424933/2023 | V | 1563 | F | 52 | 20230609 |
| EPI_ISL_13861069 | NSP3 | hCoV-19/Chile/MA-82958/2022 | V | 1563 | S | 1 | 20220626 |
| EPI_ISL_18464947 | NSP3 | hCoV-19/Fujian/FCDC-ND2019/2023 | V | 1563 | A | 8 | 20231008 |
| EPI_ISL_17372621 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2566/2023 | V | 1563 | Y | 3 | 20230103 |
| EPI_ISL_14448281 | NSP3 | hCoV-19/USA/LA-OD-5297642/2022 | V | 1563 | T | 5 | 20220803 |
| EPI_ISL_12320458 | NSP3 | hCoV-19/Turkey/HSGM-GS1955/2022 | V | 1563 | D | 5 | 20220401 |
| EPI_ISL_10762262 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-7925/2022 | R | 1564 | C | 1 | 20220202 |
| EPI_ISL_18546618 | NSP3 | hCoV-19/USA/TX-HMH-M-135202/2023 | R | 1564 | I | 14 | 20231026 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | R | 1564 | G | 11 | 20221201 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | R | 1564 | M | 7 | 20240205 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | R | 1564 | A | 5 | 20230424 |
| EPI_ISL_9364124 | NSP3 | hCoV-19/England/NEWC-345A50B/2022 | R | 1564 | T | 3 | 20220125 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | R | 1564 | del | 106 | 20230424 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | R | 1564 | E | 5 | 20230213 |
| EPI_ISL_17591978 | NSP3 | hCoV-19/Nepal/NPHL-S-2431/2023 | R | 1564 | L | 17 | 20230312 |
| EPI_ISL_19334602 | NSP3 | hCoV-19/Egypt/CPHL-EGY24153/2024 | R | 1564 | S | 10 | 20240623 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | R | 1564 | stop | 3 | 20220302 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | R | 1564 | Y | 6 | 20211103 |
| EPI_ISL_18138153 | NSP3 | hCoV-19/Shanghai/SCDC-732/2023 | R | 1564 | K | 16 | 20230809 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | R | 1564 | P | 1 | 20201214 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | R | 1564 | H | 11 | 20230108 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | R | 1564 | V | 9 | 20230217 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | R | 1564 | N | 9 | 20220126 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | R | 1564 | Q | 12 | 20230217 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | M | 1565 | C | 6 | 20230217 |
| EPI_ISL_12582727 | NSP3 | hCoV-19/Turkey/HSGM-GS2020/2022 | M | 1565 | T | 5 | 20220401 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | M | 1565 | F | 11 | 20221225 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | M | 1565 | L | 21 | 20230421 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | M | 1565 | W | 3 | 20220704 |
| EPI_ISL_19200606 | NSP3 | hCoV-19/Hubei/HCDC-WH5552/2024 | M | 1565 | R | 28 | 20240611 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | M | 1565 | D | 2 | 20210801 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | M | 1565 | insTstopTTstop | 1 | 20230217 |
| EPI_ISL_2343395 | NSP3 | hCoV-19/Greece/Z8679/2021 | M | 1565 | S | 2 | 20210224 |
| EPI_ISL_11938858 | NSP3 | hCoV-19/England/DHSC-CYDMJC4/2021 | M | 1565 | N | 4 | 20211221 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | M | 1565 | del | 94 | 20230424 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | M | 1565 | K | 9 | 20230424 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | M | 1565 | stop | 1 | 20210526 |
| EPI_ISL_17591978 | NSP3 | hCoV-19/Nepal/NPHL-S-2431/2023 | M | 1565 | Q | 13 | 20230312 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 1565 | P | 1 | 20220210 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | M | 1565 | I | 28 | 20230217 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | M | 1565 | A | 3 | 20230217 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | M | 1565 | H | 11 | 20230108 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | M | 1565 | V | 14 | 20240205 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | Y | 1566 | S | 8 | 20230424 |
| EPI_ISL_19255736 | NSP3 | hCoV-19/Hong Kong/CUHK-NC10918/2022 | Y | 1566 | D | 2 | 20220803 |
| EPI_ISL_2628248 | NSP3 | hCoV-19/USA/AZ-ASPHL-2263/2021 | Y | 1566 | insAD | 1 | 20210411 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1566 | K | 1 | 20210318 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | Y | 1566 | E | 1 | 20230217 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | Y | 1566 | Q | 9 | 20220324 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1566 | P | 1 | 20220210 |
| EPI_ISL_427289 | NSP3 | hCoV-19/USA/OH-OSUP0014/2020 | Y | 1566 | I | 1 | 20200331 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | Y | 1566 | V | 7 | 20230217 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | Y | 1566 | C | 8 | 20230217 |
| EPI_ISL_19562548 | NSP3 | hCoV-19/env/Germany/BY-LGL-6399492/2024 | Y | 1566 | N | 3 | 20241028 |
| EPI_ISL_19438265 | NSP3 | hCoV-19/Canada/BC-BCCDC-732848/2024 | Y | 1566 | H | 20 | 20240902 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | Y | 1566 | W | 15 | 20220819 |
| EPI_ISL_19216320 | NSP3 | hCoV-19/Japan/5783121_S3/2024 | Y | 1566 | stop | 172 | 20240506 |
| EPI_ISL_1704065 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-GSEQ-543/2020 | Y | 1566 | A | 1 | 20201127 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | Y | 1566 | T | 6 | 20240205 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | Y | 1566 | L | 5 | 20230217 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1566 | F | 20 | 20230108 |
| EPI_ISL_10762262 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-7925/2022 | Y | 1566 | R | 2 | 20220202 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | Y | 1566 | del | 111 | 20230424 |
| EPI_ISL_12042660 | NSP3 | hCoV-19/Italy/CAM-CN00070297/2022 | Y | 1566 | M | 2 | 20220115 |
| EPI_ISL_12784849 | NSP3 | hCoV-19/Greece/22463/2022 | I | 1567 | N | 6 | 20220414 |
| EPI_ISL_19184733 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-023952/2024 | I | 1567 | V | 711 | 20240501 |
| EPI_ISL_19611287 | NSP3 | hCoV-19/env/Germany/BY-LGL-6417699/2024 | I | 1567 | M | 4 | 20241127 |
| EPI_ISL_18611746 | NSP3 | hCoV-19/Singapore/R88MR76/2023 | I | 1567 | J | 1 | 20231127 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | I | 1567 | stop | 2 | 20210809 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | I | 1567 | P | 6 | 20211103 |
| EPI_ISL_19165399 | NSP3 | hCoV-19/Spain/VC-CVA_ALIC-123644/2024 | I | 1567 | T | 144 | 20240425 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1567 | A | 2 | 20220210 |
| EPI_ISL_18357032 | NSP3 | hCoV-19/USA/NY-NYULH-16524/2023 | I | 1567 | L | 58 | 20230930 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | I | 1567 | H | 3 | 20230424 |
| EPI_ISL_427289 | NSP3 | hCoV-19/USA/OH-OSUP0014/2020 | I | 1567 | R | 1 | 20200331 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | I | 1567 | F | 3 | 20230217 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | I | 1567 | del | 88 | 20230424 |
| EPI_ISL_10858375 | NSP3 | hCoV-19/Turkey/HSGM-G2095/2022 | I | 1567 | C | 2 | 20220217 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | I | 1567 | Y | 6 | 20221225 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | I | 1567 | K | 3 | 20230217 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | I | 1567 | S | 8 | 20221201 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | F | 1568 | H | 2 | 20210424 |
| EPI_ISL_13372371 | NSP3 | hCoV-19/USA/WI-UW-11772/2022 | F | 1568 | C | 3 | 20220606 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | F | 1568 | Y | 3 | 20230217 |
| EPI_ISL_10951150 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9188/2022 | F | 1568 | T | 3 | 20220210 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | F | 1568 | M | 16 | 20240205 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | F | 1568 | R | 6 | 20211103 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | F | 1568 | A | 2 | 20230217 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | F | 1568 | stop | 23 | 20230401 |
| EPI_ISL_16414946 | NSP3 | hCoV-19/France/CVL-HMN-22122210444/2022 | F | 1568 | S | 13 | 20221212 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | F | 1568 | V | 5 | 20221225 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | F | 1568 | E | 9 | 20220819 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | F | 1568 | I | 5 | 20230217 |
| EPI_ISL_1913072 | NSP3 | hCoV-19/Morocco/FMP-222/2021 | F | 1568 | D | 1 | 20210315 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | F | 1568 | N | 1 | 20230424 |
| EPI_ISL_19330706 | NSP3 | hCoV-19/Japan/7530074_S20/2024 | F | 1568 | L | 35 | 20240726 |
| EPI_ISL_8803756 | NSP3 | hCoV-19/India/MH-NCCS-56268/2021 | F | 1568 | W | 2 | 20210809 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1568 | P | 1 | 20210318 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | F | 1568 | del | 90 | 20230424 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | F | 1569 | Y | 24 | 20230217 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | F | 1569 | H | 8 | 20221201 |
| EPI_ISL_18580008 | NSP3 | hCoV-19/Russia/PER-RII-MH148350S/2023 | F | 1569 | V | 7048 | 20231005 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | F | 1569 | del | 86 | 20230424 |
| EPI_ISL_6599852 | NSP3 | hCoV-19/Thailand/19832/2021 | F | 1569 | A | 1 | 20211030 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | F | 1569 | P | 2 | 20230213 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | F | 1569 | T | 1 | 20230217 |
| EPI_ISL_10951225 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9306/2022 | F | 1569 | insstopVFLC | 2 | 20220210 |
| EPI_ISL_18386391 | NSP3 | hCoV-19/Switzerland/BL-UHB-USB_2023_10_09_b56f01ef/2023 | F | 1569 | C | 59 | 20230927 |
| EPI_ISL_19807421 | NSP3 | hCoV-19/Japan/FR084-0060/2025 | F | 1569 | L | 567 | 20250301 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1569 | M | 2 | 20220210 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | F | 1569 | W | 5 | 20221225 |
| EPI_ISL_19749682 | NSP3 | hCoV-19/USA/NV-CDC-LC1132264/2025 | F | 1569 | I | 30 | 20250203 |
| EPI_ISL_17147703 | NSP3 | hCoV-19/USA/FL-CDC-QDX47043295/2023 | F | 1569 | S | 25 | 20230220 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | F | 1569 | G | 2 | 20210812 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | A | 1570 | C | 8 | 20240205 |
| EPI_ISL_16599950 | NSP3 | hCoV-19/USA/TX-HMH-123068/2023 | A | 1570 | P | 5 | 20230110 |
| EPI_ISL_19474817 | NSP3 | hCoV-19/Russia/BA-RII-MH201630S/2024 | A | 1570 | H | 22 | 20240917 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1570 | M | 1 | 20220210 |
| EPI_ISL_12042660 | NSP3 | hCoV-19/Italy/CAM-CN00070297/2022 | A | 1570 | F | 2 | 20220115 |
| EPI_ISL_19610298 | NSP3 | hCoV-19/Canada/AB-ABPHL-128387/2024 | A | 1570 | V | 1011 | 20241128 |
| EPI_ISL_16394746 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2434/2022 | A | 1570 | insLGFSMY | 1 | 20221219 |
| EPI_ISL_19741532 | NSP3 | hCoV-19/USA/CA-PFZ04292/2025 | A | 1570 | S | 534 | 20250209 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | A | 1570 | K | 5 | 20221225 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | A | 1570 | Q | 7 | 20230217 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | A | 1570 | I | 28 | 20230401 |
| EPI_ISL_17275354 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45880/2023 | A | 1570 | stop | 9 | 20230217 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | A | 1570 | insILGLCGstopstop | 4 | 20220210 |
| EPI_ISL_19362678 | NSP3 | hCoV-19/USA/NY-PRL-240820_82B05/2024 | A | 1570 | T | 438 | 20240816 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | A | 1570 | del | 85 | 20230424 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | A | 1570 | insLGF | 3 | 20220704 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 1570 | G | 10 | 20230108 |
| EPI_ISL_19330706 | NSP3 | hCoV-19/Japan/7530074_S20/2024 | A | 1570 | E | 8 | 20240726 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | A | 1570 | Y | 1 | 20210424 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | A | 1570 | L | 2 | 20230217 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | A | 1570 | R | 1 | 20200729 |
| EPI_ISL_12613064 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-27006/2022 | S | 1571 | F | 2 | 20220427 |
| EPI_ISL_19794984 | NSP3 | hCoV-19/Canada/QC-L00855470001/2025 | S | 1571 | L | 2187 | 20250317 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1571 | K | 10 | 20230108 |
| EPI_ISL_7638051 | NSP3 | hCoV-19/Greece/42011/2021 | S | 1571 | Y | 3 | 20211129 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | S | 1571 | N | 24 | 20230401 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | S | 1571 | V | 6 | 20221201 |
| EPI_ISL_19772115 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10731/2025 | S | 1571 | A | 117 | 20250205 |
| EPI_ISL_19330706 | NSP3 | hCoV-19/Japan/7530074_S20/2024 | S | 1571 | stop | 6 | 20240726 |
| EPI_ISL_6901830 | NSP3 | hCoV-19/Israel/SMC-7023170/2021 | S | 1571 | P | 3 | 20211122 |
| EPI_ISL_17591978 | NSP3 | hCoV-19/Nepal/NPHL-S-2431/2023 | S | 1571 | I | 12 | 20230312 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | S | 1571 | del | 85 | 20230424 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | S | 1571 | C | 6 | 20240205 |
| EPI_ISL_19808413 | NSP3 | hCoV-19/Canada/ON-PHL-202504770/2025 | S | 1571 | T | 23 | 20250308 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | S | 1571 | D | 2 | 20210717 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | S | 1571 | R | 5 | 20230217 |
| EPI_ISL_19474817 | NSP3 | hCoV-19/Russia/BA-RII-MH201630S/2024 | S | 1571 | H | 24 | 20240917 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | F | 1572 | D | 1 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1572 | A | 2 | 20210318 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1572 | N | 1 | 20201214 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | F | 1572 | K | 1 | 20210424 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | F | 1572 | W | 6 | 20211103 |
| EPI_ISL_17483961 | NSP3 | hCoV-19/Israel/ICH-741197257/2023 | F | 1572 | Y | 98 | 20230330 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | F | 1572 | del | 82 | 20230424 |
| EPI_ISL_18160933 | NSP3 | hCoV-19/Colombia/ANT-LDSP4934/2023 | F | 1572 | C | 8 | 20230722 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | F | 1572 | Q | 1 | 20200729 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | F | 1572 | M | 9 | 20240205 |
| EPI_ISL_10544018 | NSP3 | hCoV-19/USA/TN-ASC-210597159/2022 | F | 1572 | insY | 2 | 20220105 |
| EPI_ISL_19819673 | NSP3 | hCoV-19/Singapore/Y25R14MSC54/2025 | F | 1572 | S | 40 | 20250331 |
| EPI_ISL_1475636 | NSP3 | hCoV-19/England/OXON-F79F9D/2021 | F | 1572 | insGLCGstopstop | 1 | 20210302 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | F | 1572 | stop | 2 | 20230213 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | F | 1572 | T | 1 | 20220804 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | F | 1572 | insGLCGstopstopLI | 2 | 20230127 |
| EPI_ISL_19505024 | NSP3 | hCoV-19/Japan/FR020-0021/2024 | F | 1572 | L | 169 | 20240308 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | F | 1572 | I | 11 | 20230424 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | F | 1572 | R | 1 | 20210806 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | F | 1572 | V | 63 | 20230217 |
| EPI_ISL_8166906 | NSP3 | hCoV-19/USA/ID-IBL-776352/2021 | Y | 1573 | I | 3 | 20211213 |
| EPI_ISL_19200605 | NSP3 | hCoV-19/Hubei/HCDC-WH5549/2024 | Y | 1573 | F | 50 | 20240610 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | Y | 1573 | S | 2 | 20210717 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | Y | 1573 | stop | 2 | 20230217 |
| EPI_ISL_19538078 | NSP3 | hCoV-19/Canada/ON-PHL-202419999/2024 | Y | 1573 | del | 100 | 20241029 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1573 | P | 1 | 20220210 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | Y | 1573 | insW | 1 | 20210801 |
| EPI_ISL_16394796 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2482/2022 | Y | 1573 | V | 6 | 20221225 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | Y | 1573 | insstopstopFLA | 3 | 20220324 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1573 | M | 18 | 20230108 |
| EPI_ISL_15698515 | NSP3 | hCoV-19/Spain/AN-CBA-11289/2021 | Y | 1573 | N | 2 | 20210824 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | Y | 1573 | W | 4 | 20230424 |
| EPI_ISL_7638051 | NSP3 | hCoV-19/Greece/42011/2021 | Y | 1573 | A | 3 | 20211129 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | Y | 1573 | T | 4 | 20230217 |
| EPI_ISL_19511910 | NSP3 | hCoV-19/USA/MN-MDH-43554/2024 | Y | 1573 | C | 141 | 20240922 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | Y | 1573 | L | 72 | 20230217 |
| EPI_ISL_18605160 | NSP3 | hCoV-19/Singapore/R90MR253/2023 | Y | 1573 | H | 107 | 20231205 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Y | 1573 | R | 1 | 20221229 |
| EPI_ISL_17033931 | NSP3 | hCoV-19/Puerto Rico/PR-11090018/2022 | Y | 1574 | stop | 4 | 20221116 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | Y | 1574 | V | 2 | 20210424 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | Y | 1574 | I | 6 | 20220531 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | Y | 1574 | L | 8 | 20230213 |
| EPI_ISL_19651729 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55955/2024 | Y | 1574 | H | 142 | 20241220 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1574 | S | 1 | 20220210 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | Y | 1574 | T | 1 | 20230217 |
| EPI_ISL_19677104 | NSP3 | hCoV-19/Italy/LOM_ASSTMonza_6000455806_080700/2024 | Y | 1574 | F | 12 | 20241228 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | Y | 1574 | E | 6 | 20211103 |
| EPI_ISL_18870795 | NSP3 | hCoV-19/env/Germany/BY-LGL-6128249/2024 | Y | 1574 | N | 6 | 20240117 |
| EPI_ISL_12042660 | NSP3 | hCoV-19/Italy/CAM-CN00070297/2022 | Y | 1574 | insY | 1 | 20220115 |
| EPI_ISL_19268104 | NSP3 | hCoV-19/Singapore/R40MQ49/2024 | Y | 1574 | del | 59 | 20240628 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | Y | 1574 | D | 22 | 20230401 |
| EPI_ISL_18423487 | NSP3 | hCoV-19/USA/TX-HMH-134699/2023 | Y | 1574 | M | 6 | 20231005 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Y | 1574 | Q | 4 | 20230104 |
| EPI_ISL_19643903 | NSP3 | hCoV-19/USA/CA-CDPH-500139370/2024 | Y | 1574 | C | 339 | 20240616 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | V | 1575 | D | 3 | 20220704 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | V | 1575 | K | 46 | 20230127 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | V | 1575 | Q | 3 | 20230217 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1575 | M | 15 | 20230108 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | V | 1575 | T | 6 | 20230217 |
| EPI_ISL_19632798 | NSP3 | hCoV-19/USA/UT-UPHL-241220776487/2024 | V | 1575 | I | 196 | 20241102 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | V | 1575 | insQQQPNstop | 1 | 20230213 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | V | 1575 | H | 7 | 20220819 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | V | 1575 | N | 1 | 20230418 |
| EPI_ISL_19505825 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y8I8H/2024 | V | 1575 | A | 267 | 20241014 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 1575 | R | 2 | 20221229 |
| EPI_ISL_15408495 | NSP3 | hCoV-19/Brazil/BA-UFOB-00255/2022 | V | 1575 | G | 4 | 20220720 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | V | 1575 | insLLC | 3 | 20220531 |
| EPI_ISL_18423487 | NSP3 | hCoV-19/USA/TX-HMH-134699/2023 | V | 1575 | Y | 10 | 20231005 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 1575 | C | 9 | 20230217 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | V | 1575 | F | 2 | 20211225 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | V | 1575 | stop | 3 | 20220203 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 1575 | E | 4 | 20221226 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | V | 1575 | del | 45 | 20240205 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | V | 1575 | S | 1 | 20230217 |
| EPI_ISL_19597605 | NSP3 | hCoV-19/Sichuan/MSCDC-071008/2024 | V | 1575 | L | 77 | 20240615 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | W | 1576 | F | 11 | 20220819 |
| EPI_ISL_19365905 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-144487/2024 | W | 1576 | C | 114 | 20240807 |
| EPI_ISL_3922822 | NSP3 | hCoV-19/USA/ID-IBL-638515/2020 | W | 1576 | insLEC | 2 | 20200801 |
| EPI_ISL_12694334 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726468255/2022 | W | 1576 | insQTstopstopSN | 2 | 20220126 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | W | 1576 | K | 3 | 20221229 |
| EPI_ISL_11934985 | NSP3 | hCoV-19/England/DHSC-CYD5W4T/2022 | W | 1576 | E | 5 | 20220225 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | W | 1576 | I | 1 | 20221226 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | W | 1576 | M | 6 | 20220531 |
| EPI_ISL_17275365 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45891/2023 | W | 1576 | stop | 21 | 20230217 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | W | 1576 | T | 7 | 20211103 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | W | 1576 | Q | 1 | 20220210 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | W | 1576 | Y | 3 | 20210807 |
| EPI_ISL_19008254 | NSP3 | hCoV-19/Brazil/DF-LACENDF-530095766/2024 | W | 1576 | R | 63 | 20240131 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | W | 1576 | V | 5 | 20230104 |
| EPI_ISL_18423487 | NSP3 | hCoV-19/USA/TX-HMH-134699/2023 | W | 1576 | G | 189 | 20231005 |
| EPI_ISL_1167194 | NSP3 | hCoV-19/Egypt/MASRI-C5-026/2020 | W | 1576 | H | 1 | 20200624 |
| EPI_ISL_1533775 | NSP3 | hCoV-19/India/MH-NCCS-CHN21025955/2021 | W | 1576 | S | 3 | 20210221 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | W | 1576 | L | 42 | 20230401 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | W | 1576 | del | 53 | 20240205 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | K | 1577 | del | 51 | 20230424 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | K | 1577 | L | 9 | 20230217 |
| EPI_ISL_19592902 | NSP3 | hCoV-19/Italy/FVG-UD-65331512/2024 | K | 1577 | Q | 70 | 20241125 |
| EPI_ISL_2404760 | NSP3 | hCoV-19/USA/OR-TRACE-DESC-050921-704/2021 | K | 1577 | F | 2 | 20210509 |
| EPI_ISL_16661529 | NSP3 | hCoV-19/USA/IL-CDC-QDX45133088/2022 | K | 1577 | N | 47 | 20221231 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | K | 1577 | S | 5 | 20211103 |
| EPI_ISL_19696821 | NSP3 | hCoV-19/Turkey/HSGM-AA000480/2024 | K | 1577 | E | 225 | 20240707 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | K | 1577 | stop | 15 | 20230217 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | K | 1577 | H | 1 | 20210801 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1577 | V | 1 | 20201214 |
| EPI_ISL_19765260 | NSP3 | hCoV-19/USA/NY-PRL-250225_81C01/2025 | K | 1577 | I | 17 | 20250214 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | K | 1577 | P | 45 | 20230127 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | K | 1577 | G | 3 | 20230217 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 1577 | Y | 2 | 20221229 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | K | 1577 | T | 45 | 20240205 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | K | 1577 | A | 2 | 20230217 |
| EPI_ISL_19745830 | NSP3 | hCoV-19/USA/NY-SUNYQB-X5979185/2025 | K | 1577 | R | 189 | 20250127 |
| EPI_ISL_8166906 | NSP3 | hCoV-19/USA/ID-IBL-776352/2021 | K | 1577 | insVMCMLstopT | 2 | 20211213 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | K | 1577 | insNstopSCTNGPDF | 3 | 20220324 |
| EPI_ISL_16394739 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2418/2022 | S | 1578 | Q | 2 | 20221220 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | S | 1578 | H | 2 | 20230217 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | S | 1578 | D | 3 | 20230424 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | S | 1578 | K | 10 | 20220531 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | S | 1578 | stop | 1 | 20221217 |
| EPI_ISL_18696157 | NSP3 | hCoV-19/Canada/ON-PHL-23-49191/2023 | S | 1578 | C | 32 | 20231214 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | S | 1578 | R | 47 | 20230127 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | S | 1578 | insstopstopSNKSR | 8 | 20230401 |
| EPI_ISL_19826381 | NSP3 | hCoV-19/Canada/ON-PHL-202505077/2025 | S | 1578 | G | 1336 | 20250326 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1578 | V | 6 | 20220210 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | S | 1578 | L | 1 | 20210803 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | S | 1578 | del | 55 | 20230424 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | S | 1578 | E | 4 | 20230217 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | S | 1578 | A | 4 | 20220203 |
| EPI_ISL_19803641 | NSP3 | hCoV-19/USA/WI-WSLH-2500850/2025 | S | 1578 | I | 5230 | 20250217 |
| EPI_ISL_18464953 | NSP3 | hCoV-19/Fujian/FCDC-QZ10S033/2023 | S | 1578 | N | 165 | 20231023 |
| EPI_ISL_8882815 | NSP3 | hCoV-19/India/GA-NCCS-VH78747/2021 | S | 1578 | insMCMLstopTLstop | 1 | 20210629 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | S | 1578 | T | 113 | 20230401 |
| EPI_ISL_570045 | NSP3 | hCoV-19/USA/WA-UW-4127/2020 | S | 1578 | F | 1 | 20200331 |
| EPI_ISL_1475636 | NSP3 | hCoV-19/England/OXON-F79F9D/2021 | S | 1578 | W | 1 | 20210302 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | S | 1578 | M | 8 | 20220819 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | Y | 1579 | N | 2 | 20210801 |
| EPI_ISL_2348991 | NSP3 | hCoV-19/Greece/809/2020 | Y | 1579 | W | 1 | 20201218 |
| EPI_ISL_14954510 | NSP3 | hCoV-19/USA/TX-HMH-M-114683/2022 | Y | 1579 | insCMLstopTVV | 2 | 20220904 |
| EPI_ISL_11507501 | NSP3 | hCoV-19/Turkey/HSGM-G7451/2022 | Y | 1579 | stop | 5 | 20220311 |
| EPI_ISL_2348991 | NSP3 | hCoV-19/Greece/809/2020 | Y | 1579 | insLMWLI | 1 | 20201218 |
| EPI_ISL_19496376 | NSP3 | hCoV-19/env/Uruguay/LEVVZ-660/2023 | Y | 1579 | del | 58 | 20230619 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | Y | 1579 | M | 12 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Y | 1579 | A | 3 | 20221226 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | Y | 1579 | insGstopN | 3 | 20220324 |
| EPI_ISL_12308587 | NSP3 | hCoV-19/Russia/RYA-CRIE-7725530618/2022 | Y | 1579 | D | 1 | 20220130 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | Y | 1579 | S | 6 | 20230217 |
| EPI_ISL_8803759 | NSP3 | hCoV-19/India/GA-NCCS-3055200157344/2021 | Y | 1579 | insSYGstopN | 2 | 20210803 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | Y | 1579 | F | 56 | 20230424 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1579 | V | 19 | 20230108 |
| EPI_ISL_10397178 | NSP3 | hCoV-19/Turkey/HSGM-G1619/2022 | Y | 1579 | Q | 1 | 20220214 |
| EPI_ISL_12694334 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726468255/2022 | Y | 1579 | R | 2 | 20220126 |
| EPI_ISL_19767076 | NSP3 | hCoV-19/Gansu/PLCDC-0011/2025 | Y | 1579 | C | 272 | 20250301 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | Y | 1579 | L | 16 | 20230217 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | Y | 1579 | insQTI | 1 | 20230213 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | Y | 1579 | H | 19 | 20221217 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | V | 1580 | H | 7 | 20211103 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | V | 1580 | Q | 42 | 20230127 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | V | 1580 | C | 12 | 20240205 |
| EPI_ISL_19577509 | NSP3 | hCoV-19/Canada/ON-PHL-202422975/2024 | V | 1580 | L | 165 | 20241124 |
| EPI_ISL_8706747 | NSP3 | hCoV-19/England/NEWC-2FD8E8A/2021 | V | 1580 | stop | 2 | 20211223 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | V | 1580 | Y | 10 | 20230401 |
| EPI_ISL_17275319 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45844/2023 | V | 1580 | K | 2 | 20230217 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | V | 1580 | T | 5 | 20230217 |
| EPI_ISL_19530805 | NSP3 | hCoV-19/Australia/WA16487/2024 | V | 1580 | A | 97 | 20241021 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 1580 | R | 3 | 20221226 |
| EPI_ISL_8739130 | NSP3 | hCoV-19/England/PHEP-YYDB696/2021 | V | 1580 | E | 6 | 20211218 |
| EPI_ISL_19713966 | NSP3 | hCoV-19/Russia/LEN-RII-1400S/2025 | V | 1580 | M | 142 | 20250114 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | V | 1580 | del | 51 | 20230424 |
| EPI_ISL_1165086 | NSP3 | hCoV-19/Egypt/MASRI-C4-014/2020 | V | 1580 | insALLRLstop | 1 | 20200608 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | V | 1580 | G | 10 | 20230217 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1580 | insI | 10 | 20230108 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | V | 1580 | F | 1 | 20210424 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | V | 1580 | I | 16 | 20221217 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | V | 1580 | N | 2 | 20211228 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | H | 1581 | insK | 1 | 20210813 |
| EPI_ISL_15292714 | NSP3 | hCoV-19/India/MH-NCCS-2748700699199/2021 | H | 1581 | insGLIAIVMV | 3 | 20211212 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | H | 1581 | L | 47 | 20230127 |
| EPI_ISL_19040341 | NSP3 | hCoV-19/Hubei/HCDC-WH4464/2024 | H | 1581 | Y | 16 | 20240328 |
| EPI_ISL_12617603 | NSP3 | hCoV-19/USA/ID-IBL-660217/2020 | H | 1581 | insSC | 1 | 20200923 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | H | 1581 | M | 2 | 20210812 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | H | 1581 | A | 5 | 20220104 |
| EPI_ISL_12152769 | NSP3 | hCoV-19/Russia/SMO-CRIE-S_7720493192/2022 | H | 1581 | Q | 2 | 20220110 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | H | 1581 | C | 6 | 20230217 |
| EPI_ISL_18797713 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-1812-7567/2024 | H | 1581 | P | 3 | 20240102 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | H | 1581 | G | 1 | 20220203 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | H | 1581 | I | 1 | 20221217 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | H | 1581 | D | 4 | 20220531 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | H | 1581 | R | 3 | 20230217 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | H | 1581 | V | 1 | 20210416 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | H | 1581 | insA | 1 | 20211228 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | H | 1581 | E | 4 | 20210917 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | H | 1581 | S | 9 | 20240205 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | H | 1581 | stop | 1 | 20210803 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | H | 1581 | del | 51 | 20230424 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | H | 1581 | N | 19 | 20230401 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | H | 1581 | K | 8 | 20220819 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | H | 1581 | T | 2 | 20210802 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | H | 1581 | F | 1 | 20210424 |
| EPI_ISL_18338357 | NSP3 | hCoV-19/France/GES-IPP21127/2023 | V | 1582 | del | 49 | 20230918 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1582 | Q | 18 | 20230108 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | V | 1582 | C | 8 | 20240205 |
| EPI_ISL_16376783 | NSP3 | hCoV-19/Nigeria/V350083755C_L01_6_6/2022 | V | 1582 | G | 4 | 20220930 |
| EPI_ISL_16394739 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2418/2022 | V | 1582 | N | 2 | 20221220 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | V | 1582 | M | 2 | 20210807 |
| EPI_ISL_19706707 | NSP3 | hCoV-19/Italy/UMB-LAOP-167-4-05/2025 | V | 1582 | I | 963 | 20250107 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | V | 1582 | W | 43 | 20230127 |
| EPI_ISL_19657680 | NSP3 | hCoV-19/Canada/AB-ABPHL-129740/2024 | V | 1582 | F | 196 | 20241224 |
| EPI_ISL_19070436 | NSP3 | hCoV-19/env/Germany/BY-LGL-6194326/2024 | V | 1582 | L | 25 | 20240325 |
| EPI_ISL_11887715 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0677/2021 | V | 1582 | insIQ | 2 | 20211227 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 1582 | R | 2 | 20221226 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | V | 1582 | K | 2 | 20210813 |
| EPI_ISL_18956138 | NSP3 | hCoV-19/Poland/Kce-333/2024 | V | 1582 | A | 76 | 20240215 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | V | 1582 | T | 8 | 20230217 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | V | 1582 | Y | 8 | 20230401 |
| EPI_ISL_1585044 | NSP3 | hCoV-19/USA/KS-KSU-4889/2021 | V | 1582 | D | 1 | 20210224 |
| EPI_ISL_3922822 | NSP3 | hCoV-19/USA/ID-IBL-638515/2020 | V | 1582 | H | 2 | 20200801 |
| EPI_ISL_19639896 | NSP3 | hCoV-19/USA/MN-MDH-44489/2024 | V | 1583 | L | 503 | 20241203 |
| EPI_ISL_18609328 | NSP3 | hCoV-19/USA/OH-ODH-SC3033604/2023 | V | 1583 | A | 64 | 20231121 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | V | 1583 | del | 41 | 20230424 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | V | 1583 | S | 3 | 20230424 |
| EPI_ISL_1533775 | NSP3 | hCoV-19/India/MH-NCCS-CHN21025955/2021 | V | 1583 | D | 1 | 20210221 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | V | 1583 | insstop | 2 | 20210807 |
| EPI_ISL_9073145 | NSP3 | hCoV-19/USA/CA-CDC-ASC210586792/2022 | V | 1583 | G | 3 | 20220104 |
| EPI_ISL_8882815 | NSP3 | hCoV-19/India/GA-NCCS-VH78747/2021 | V | 1583 | Y | 2 | 20210629 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | V | 1583 | Q | 2 | 20210917 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | V | 1583 | E | 2 | 20210813 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | V | 1583 | stop | 1 | 20210812 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | V | 1583 | K | 3 | 20230213 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | V | 1583 | R | 2 | 20230217 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | V | 1583 | C | 10 | 20230401 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | V | 1583 | N | 1 | 20210416 |
| EPI_ISL_8229804 | NSP3 | hCoV-19/Germany/HB-RKI-I-400505/2021 | V | 1583 | F | 7 | 20211211 |
| EPI_ISL_19622963 | NSP3 | hCoV-19/New Zealand/24YA7641/2024 | V | 1583 | I | 399 | 20241126 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | V | 1583 | M | 6 | 20220819 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | D | 1584 | S | 3 | 20230217 |
| EPI_ISL_13033059 | NSP3 | hCoV-19/USA/FL-BPHL-7541/2022 | D | 1584 | H | 19 | 20220121 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | D | 1584 | F | 1 | 20211228 |
| EPI_ISL_15292714 | NSP3 | hCoV-19/India/MH-NCCS-2748700699199/2021 | D | 1584 | M | 8 | 20211212 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | D | 1584 | I | 4 | 20230213 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | D | 1584 | R | 1 | 20220104 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | D | 1584 | stop | 10 | 20230401 |
| EPI_ISL_14436428 | NSP3 | hCoV-19/USA/TX-HMH-110749/2022 | D | 1584 | B | 7 | 20220803 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 1584 | V | 23 | 20230108 |
| EPI_ISL_17996695 | NSP3 | hCoV-19/Singapore/R49MR5/2023 | D | 1584 | Y | 85 | 20230710 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | D | 1584 | K | 7 | 20240205 |
| EPI_ISL_19323066 | NSP3 | hCoV-19/Japan/FR066-0147/2024 | D | 1584 | A | 54 | 20240717 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | D | 1584 | L | 11 | 20230217 |
| EPI_ISL_19693296 | NSP3 | hCoV-19/USA/MI-UM-10061457414/2024 | D | 1584 | E | 297 | 20241223 |
| EPI_ISL_9674612 | NSP3 | hCoV-19/Nigeria/NCDC-NR-GL-002110/2021 | D | 1584 | insRKS | 1 | 20211218 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | D | 1584 | T | 3 | 20210812 |
| EPI_ISL_9878060 | NSP3 | hCoV-19/Nigeria/NCDC-NR-GL-002229/2021 | D | 1584 | insRKX | 2 | 20211230 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | D | 1584 | C | 1 | 20210805 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | D | 1584 | del | 57 | 20230424 |
| EPI_ISL_18621025 | NSP3 | hCoV-19/USA/MD-CDC-LC1073052/2023 | D | 1584 | G | 26 | 20231129 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | D | 1584 | Q | 6 | 20220704 |
| EPI_ISL_19829203 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136540/2025 | D | 1584 | N | 202 | 20250403 |
| EPI_ISL_9455824 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00318/2022 | G | 1585 | insXXF | 1 | 20220106 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | G | 1585 | insYRVHstopL | 1 | 20230217 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | G | 1585 | R | 6 | 20230213 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | G | 1585 | W | 8 | 20230401 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | G | 1585 | stop | 16 | 20230108 |
| EPI_ISL_18875852 | NSP3 | hCoV-19/Russia/RARI-1941/2023 | G | 1585 | S | 37 | 20230824 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | G | 1585 | del | 61 | 20230424 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1585 | K | 1 | 20220210 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | G | 1585 | E | 3 | 20221217 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | G | 1585 | N | 3 | 20221229 |
| EPI_ISL_19179246 | NSP3 | hCoV-19/England/CLIMB-CM7YFKOW/2024 | G | 1585 | A | 8 | 20240522 |
| EPI_ISL_17466166 | NSP3 | hCoV-19/India/CT-AIIMSR-VRDL-INSACOG-1165/2023 | G | 1585 | C | 359 | 20230404 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | G | 1585 | Q | 5 | 20230424 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | G | 1585 | T | 2 | 20230217 |
| EPI_ISL_18069600 | NSP3 | hCoV-19/USA/CA-HLX-STM-3QMUUAHV2/2023 | G | 1585 | V | 30 | 20230713 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | G | 1585 | L | 9 | 20220203 |
| EPI_ISL_11355421 | NSP3 | hCoV-19/France/GES-ChNa-210059857801/2021 | G | 1585 | M | 4 | 20210719 |
| EPI_ISL_2438603 | NSP3 | hCoV-19/Kazakhstan/KZY-NRL-468S/2021 | G | 1585 | D | 1 | 20210409 |
| EPI_ISL_16394739 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2418/2022 | G | 1585 | Y | 3 | 20221220 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | C | 1586 | insIILL | 1 | 20210801 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | C | 1586 | M | 2 | 20221226 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | C | 1586 | K | 2 | 20220117 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | C | 1586 | N | 1 | 20210917 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | C | 1586 | del | 35 | 20230424 |
| EPI_ISL_13647590 | NSP3 | hCoV-19/USA/KS-KSU-2839/2022 | C | 1586 | S | 2 | 20220622 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | C | 1586 | L | 11 | 20230424 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | C | 1586 | G | 4 | 20230217 |
| EPI_ISL_2775570 | NSP3 | hCoV-19/USA/WY-WYPHL-21038839/2021 | C | 1586 | F | 2 | 20210530 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | C | 1586 | T | 36 | 20210419 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | C | 1586 | A | 4 | 20210812 |
| EPI_ISL_454602 | NSP3 | hCoV-19/Croatia/14412_Koprivnica/2020 | C | 1586 | H | 1 | 20200421 |
| EPI_ISL_9455824 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00318/2022 | C | 1586 | I | 3 | 20220106 |
| EPI_ISL_11190934 | NSP3 | hCoV-19/Puerto Rico/PR-011222-S-2277/2022 | C | 1586 | W | 5 | 20220112 |
| EPI_ISL_14584694 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16379/2022 | C | 1586 | stop | 6 | 20220725 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1586 | P | 1 | 20210318 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | C | 1586 | V | 8 | 20230213 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | C | 1586 | Q | 4 | 20230104 |
| EPI_ISL_9050351 | NSP3 | hCoV-19/USA/NY-SUNYQB-61210452316213/2021 | C | 1586 | Y | 8 | 20211207 |
| EPI_ISL_18351636 | NSP3 | hCoV-19/USA/UT-UPHL-231003960968/2023 | N | 1587 | insGCK | 1 | 20230928 |
| EPI_ISL_1533775 | NSP3 | hCoV-19/India/MH-NCCS-CHN21025955/2021 | N | 1587 | insLM | 1 | 20210221 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | N | 1587 | G | 10 | 20221229 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | N | 1587 | Y | 5 | 20230424 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | N | 1587 | L | 2 | 20210919 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | N | 1587 | R | 2 | 20230424 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1587 | V | 17 | 20230108 |
| EPI_ISL_19692223 | NSP3 | hCoV-19/New Zealand/25YA0232/2025 | N | 1587 | T | 156 | 20250107 |
| EPI_ISL_18486898 | NSP3 | hCoV-19/Chile/BI-78988/2023 | N | 1587 | B | 10 | 20231009 |
| EPI_ISL_19822493 | NSP3 | hCoV-19/Australia/QLD0x01547B/2025 | N | 1587 | S | 2358 | 20250324 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | N | 1587 | del | 43 | 20230418 |
| EPI_ISL_17425628 | NSP3 | hCoV-19/India/MH-ICMR-MCL-H-7060-11249/2022 | N | 1587 | H | 4 | 20221021 |
| EPI_ISL_14081825 | NSP3 | hCoV-19/Japan/RIMD10004/2022 | N | 1587 | I | 25 | 20220407 |
| EPI_ISL_19651672 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55865/2024 | N | 1587 | D | 163 | 20241210 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | N | 1587 | F | 1 | 20211228 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | N | 1587 | C | 10 | 20240205 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | N | 1587 | Q | 4 | 20221217 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | N | 1587 | E | 3 | 20230104 |
| EPI_ISL_19826835 | NSP3 | hCoV-19/USA/TN-SPHL-0008/2025 | N | 1587 | K | 287 | 20250120 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | N | 1587 | M | 19 | 20230213 |
| EPI_ISL_15334776 | NSP3 | hCoV-19/Chile/AR-115262/2022 | N | 1587 | A | 2 | 20220927 |
| EPI_ISL_7638051 | NSP3 | hCoV-19/Greece/42011/2021 | N | 1587 | W | 1 | 20211129 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | N | 1587 | stop | 10 | 20230401 |
| EPI_ISL_16394739 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2418/2022 | S | 1588 | M | 5 | 20221220 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | S | 1588 | E | 8 | 20220203 |
| EPI_ISL_19374850 | NSP3 | hCoV-19/Spain/CL-COV48381/2024 | S | 1588 | P | 10 | 20240720 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | S | 1588 | D | 3 | 20221229 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | S | 1588 | K | 18 | 20230424 |
| EPI_ISL_10592580 | NSP3 | hCoV-19/Germany/RP-USAFSAM-S13214/2022 | S | 1588 | stop | 4 | 20220123 |
| EPI_ISL_17275336 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45861/2023 | S | 1588 | Q | 2 | 20230217 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 1588 | C | 7 | 20221226 |
| EPI_ISL_1096142 | NSP3 | hCoV-19/Mexico/CMX-IMSS_K9/2021 | S | 1588 | F | 1 | 20210121 |
| EPI_ISL_18918701 | NSP3 | hCoV-19/Italy/VEN-ULSS8-2509592_VI/2024 | S | 1588 | T | 70 | 20240214 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | S | 1588 | I | 10 | 20230217 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | S | 1588 | V | 2 | 20230213 |
| EPI_ISL_19467834 | NSP3 | hCoV-19/Singapore/R54MQ42/2024 | S | 1588 | A | 62 | 20240924 |
| EPI_ISL_19819685 | NSP3 | hCoV-19/Singapore/Y25R14MSC87/2025 | S | 1588 | L | 6235 | 20250402 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | S | 1588 | R | 1 | 20211109 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | S | 1588 | H | 6 | 20221201 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | S | 1588 | N | 5 | 20220118 |
| EPI_ISL_18351626 | NSP3 | hCoV-19/USA/UT-UPHL-231003136491/2023 | S | 1588 | G | 2 | 20230925 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | S | 1588 | del | 41 | 20230418 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | S | 1589 | Q | 6 | 20230424 |
| EPI_ISL_18351626 | NSP3 | hCoV-19/USA/UT-UPHL-231003136491/2023 | S | 1589 | C | 4 | 20230925 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | S | 1589 | K | 9 | 20220203 |
| EPI_ISL_17127644 | NSP3 | hCoV-19/USA/MI-CDC-QDX46679061/2023 | S | 1589 | R | 2 | 20230209 |
| EPI_ISL_19495489 | NSP3 | hCoV-19/Canada/BC-BCCDC-740018/2024 | S | 1589 | A | 229 | 20240921 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | S | 1589 | E | 1 | 20210801 |
| EPI_ISL_18754242 | NSP3 | hCoV-19/Poland/0045WSN2024_wsseol/2023 | S | 1589 | T | 18 | 20231113 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | S | 1589 | del | 46 | 20240205 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | S | 1589 | G | 1 | 20210416 |
| EPI_ISL_9455824 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00318/2022 | S | 1589 | Y | 1 | 20220106 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1589 | N | 21 | 20230108 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | S | 1589 | V | 20 | 20230401 |
| EPI_ISL_19662581 | NSP3 | hCoV-19/Singapore/R60MQ102/2024 | S | 1589 | L | 332 | 20241030 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | S | 1589 | stop | 13 | 20220819 |
| EPI_ISL_19823409 | NSP3 | hCoV-19/Japan/FR021-0277/2025 | S | 1589 | P | 2153 | 20250311 |
| EPI_ISL_11355262 | NSP3 | hCoV-19/France/GES-ChNa-210064702401/2021 | S | 1589 | I | 2 | 20210810 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | S | 1589 | F | 4 | 20220704 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | S | 1589 | insLHHFIMYGKV | 3 | 20220210 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | S | 1589 | M | 2 | 20220117 |
| EPI_ISL_19682865 | NSP3 | hCoV-19/USA/NM-NMDOH-038795/2024 | T | 1590 | A | 116 | 20241126 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | T | 1590 | M | 12 | 20220210 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | T | 1590 | R | 1 | 20211219 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | T | 1590 | insDFSYGstopNVHLL | 1 | 20210416 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | T | 1590 | stop | 1 | 20211109 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | T | 1590 | insHHFIMYGKVM | 2 | 20230127 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1590 | V | 21 | 20230108 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | T | 1590 | del | 44 | 20240205 |
| EPI_ISL_15709611 | NSP3 | hCoV-19/env/USA/CA-SEARCH-91687/2022 | T | 1590 | P | 8 | 20220512 |
| EPI_ISL_19486352 | NSP3 | hCoV-19/USA/IL-RIPHL_123525_G/2024 | T | 1590 | N | 457 | 20241001 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | T | 1590 | H | 37 | 20230213 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 1590 | S | 25 | 20221226 |
| EPI_ISL_9455824 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00318/2022 | T | 1590 | D | 1 | 20220106 |
| EPI_ISL_12658807 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121921-1320/2021 | T | 1590 | insMYNY | 1 | 20211219 |
| EPI_ISL_16258484 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1990/2022 | T | 1590 | Y | 7 | 20220801 |
| EPI_ISL_18351626 | NSP3 | hCoV-19/USA/UT-UPHL-231003136491/2023 | T | 1590 | K | 3 | 20230925 |
| EPI_ISL_7638051 | NSP3 | hCoV-19/Greece/42011/2021 | T | 1590 | W | 1 | 20211129 |
| EPI_ISL_5854760 | NSP3 | hCoV-19/Nigeria/MRL-OS-2079/2021 | T | 1590 | F | 4 | 20210630 |
| EPI_ISL_19831938 | NSP3 | hCoV-19/England/CLIMB-CM7YRR1Q/2025 | T | 1590 | I | 8379 | 20250331 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | T | 1590 | insVVIHQLVstop | 4 | 20220819 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | T | 1590 | L | 36 | 20230401 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | C | 1591 | insYstopstop | 1 | 20211228 |
| EPI_ISL_17372601 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2515/2022 | C | 1591 | T | 3 | 20221217 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | C | 1591 | Q | 2 | 20230104 |
| EPI_ISL_13660667 | NSP3 | hCoV-19/USA/UT-UPHL-220702103180/2022 | C | 1591 | F | 11 | 20220609 |
| EPI_ISL_12321606 | NSP3 | hCoV-19/Turkey/HSGM-GS2454/2022 | C | 1591 | Y | 2 | 20220405 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | C | 1591 | I | 15 | 20230108 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | C | 1591 | del | 35 | 20230401 |
| EPI_ISL_12321724 | NSP3 | hCoV-19/Turkey/HSGM-GS2536/2022 | C | 1591 | stop | 2 | 20220405 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | C | 1591 | A | 4 | 20230217 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | C | 1591 | R | 3 | 20230424 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | C | 1591 | W | 4 | 20230217 |
| EPI_ISL_19256644 | NSP3 | hCoV-19/Hubei/HCDC-WH5765/2024 | C | 1591 | G | 5 | 20240630 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | C | 1591 | insGstopstop | 5 | 20230217 |
| EPI_ISL_4170073 | NSP3 | hCoV-19/Thailand/Samut Prakan_SEQ7316/2021 | C | 1591 | N | 1 | 20210824 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | C | 1591 | P | 1 | 20210424 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | C | 1591 | L | 18 | 20230424 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | C | 1591 | insHLIMYGK | 1 | 20210806 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | C | 1591 | H | 39 | 20221229 |
| EPI_ISL_1077253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-22725/2020 | C | 1591 | insHFIMYGK | 1 | 20201230 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | C | 1591 | S | 6 | 20221226 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | C | 1591 | V | 8 | 20221201 |
| EPI_ISL_16258484 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1990/2022 | C | 1591 | K | 6 | 20220801 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | C | 1591 | insII | 1 | 20210416 |
| EPI_ISL_12694334 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726468255/2022 | M | 1592 | stop | 5 | 20220126 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | M | 1592 | insEK | 7 | 20220324 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | M | 1592 | insstop | 1 | 20210805 |
| EPI_ISL_3588811 | NSP3 | hCoV-19/USA/ID-IBL-746485/2021 | M | 1592 | W | 1 | 20210805 |
| EPI_ISL_19652561 | NSP3 | hCoV-19/Denmark/DCGC-691192/2024 | M | 1592 | T | 105 | 20241209 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | M | 1592 | G | 7 | 20240205 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | M | 1592 | N | 2 | 20221226 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | M | 1592 | insEKLG | 1 | 20210804 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | M | 1592 | A | 9 | 20220203 |
| EPI_ISL_12321724 | NSP3 | hCoV-19/Turkey/HSGM-GS2536/2022 | M | 1592 | R | 2 | 20220405 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | M | 1592 | del | 47 | 20230401 |
| EPI_ISL_19359441 | NSP3 | hCoV-19/USA/TN-SPHL-2500/2024 | M | 1592 | K | 13 | 20240224 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | M | 1592 | insLstopTVVIHQLAW | 1 | 20200729 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | M | 1592 | F | 43 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 1592 | Q | 1 | 20220210 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | M | 1592 | C | 14 | 20230401 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | M | 1592 | L | 38 | 20230424 |
| EPI_ISL_19755631 | NSP3 | hCoV-19/USA/IL-RIPHL_15318_G/2025 | M | 1592 | V | 1210 | 20250211 |
| EPI_ISL_19484371 | NSP3 | hCoV-19/USA/NY-PRL-241008_83A08/2024 | M | 1592 | I | 232 | 20240925 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | M | 1592 | S | 5 | 20230424 |
| EPI_ISL_1096142 | NSP3 | hCoV-19/Mexico/CMX-IMSS_K9/2021 | M | 1592 | Y | 1 | 20210121 |
| EPI_ISL_18369308 | NSP3 | hCoV-19/USA/NY-CDC-QDX85528101/2023 | M | 1593 | V | 24 | 20230923 |
| EPI_ISL_8882807 | NSP3 | hCoV-19/India/GA-NCCS-VH78098/2021 | M | 1593 | insstopTLstopHQRstop | 1 | 20210626 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | M | 1593 | H | 1 | 20210806 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | M | 1593 | C | 10 | 20221226 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | M | 1593 | Q | 3 | 20221201 |
| EPI_ISL_19405371 | NSP3 | hCoV-19/Japan/6GA-263/2024 | M | 1593 | L | 127 | 20240729 |
| EPI_ISL_19439304 | NSP3 | hCoV-19/USA/CA-CDPH-500141008/2024 | M | 1593 | I | 103 | 20240723 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | M | 1593 | D | 3 | 20230217 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | M | 1593 | A | 3 | 20230424 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | M | 1593 | S | 10 | 20240205 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | M | 1593 | Y | 3 | 20221229 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | M | 1593 | N | 3 | 20230418 |
| EPI_ISL_17425919 | NSP3 | hCoV-19/India/MH-CSIR-2921/2023 | M | 1593 | del | 48 | 20230401 |
| EPI_ISL_10858470 | NSP3 | hCoV-19/Turkey/HSGM-G2310/2022 | M | 1593 | K | 1 | 20220217 |
| EPI_ISL_19256644 | NSP3 | hCoV-19/Hubei/HCDC-WH5765/2024 | M | 1593 | R | 2 | 20240630 |
| EPI_ISL_17275350 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45876/2023 | M | 1593 | G | 1 | 20230217 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | M | 1593 | insstopTVVIHQLVstop | 11 | 20230127 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | M | 1593 | insQYILLVILGL | 3 | 20220704 |
| EPI_ISL_12694334 | NSP3 | hCoV-19/Russia/SMO-CRIE-7726468255/2022 | M | 1593 | W | 3 | 20220126 |
| EPI_ISL_15292774 | NSP3 | hCoV-19/India/GA-NCCS-3055100282758/2021 | M | 1593 | insHQLVstop | 1 | 20211221 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | M | 1593 | T | 8 | 20220819 |
| EPI_ISL_17715025 | NSP3 | hCoV-19/India/UP-MRU-ICMR-36/2023 | C | 1594 | del | 55 | 20230418 |
| EPI_ISL_12223848 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0836/2022 | C | 1594 | F | 4 | 20220110 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | C | 1594 | Q | 1 | 20210424 |
| EPI_ISL_18933348 | NSP3 | hCoV-19/env/Germany/BY-LGL-6153720/2024 | C | 1594 | G | 6 | 20240207 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | C | 1594 | N | 16 | 20230424 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | C | 1594 | S | 3 | 20221229 |
| EPI_ISL_13864591 | NSP3 | hCoV-19/Italy/LOM_SYNLAB_9167224576/2022 | C | 1594 | W | 6 | 20220401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1594 | I | 1 | 20210318 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | C | 1594 | insGstopstopLIL | 4 | 20220704 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | C | 1594 | A | 2 | 20230424 |
| EPI_ISL_18455260 | NSP3 | hCoV-19/env/Ukraine/80244/2023 | C | 1594 | R | 4 | 20230911 |
| EPI_ISL_1103582 | NSP3 | hCoV-19/Belgium/UZA-UA-CV0615745892/2021 | C | 1594 | stop | 1 | 20210204 |
| EPI_ISL_17033956 | NSP3 | hCoV-19/Puerto Rico/PR-2666/2022 | C | 1594 | Y | 2 | 20221129 |
| EPI_ISL_9204393 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-75101/2022 | C | 1594 | insRRLstopFINLYDV | 3 | 20220104 |
| EPI_ISL_11355415 | NSP3 | hCoV-19/France/GES-ChNa-210059740001/2021 | C | 1594 | insRRLstopFINLYXX | 1 | 20210716 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | C | 1594 | V | 6 | 20230217 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | C | 1594 | L | 12 | 20230217 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | C | 1594 | H | 1 | 20230213 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | C | 1594 | M | 36 | 20210419 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | C | 1594 | T | 1 | 20210806 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Y | 1595 | M | 5 | 20230104 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | Y | 1595 | T | 6 | 20220117 |
| EPI_ISL_19272229 | NSP3 | hCoV-19/Wales/CLIMB-CM7YFF8F/2024 | Y | 1595 | H | 10 | 20240706 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | Y | 1595 | K | 4 | 20230424 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | Y | 1595 | stop | 27 | 20230401 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | Y | 1595 | N | 1 | 20220117 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | Y | 1595 | E | 1 | 20210917 |
| EPI_ISL_17710059 | NSP3 | hCoV-19/India/UP-MRU-ICMR-19/2023 | Y | 1595 | del | 54 | 20230429 |
| EPI_ISL_16394739 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2418/2022 | Y | 1595 | G | 1 | 20221220 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | Y | 1595 | R | 4 | 20220203 |
| EPI_ISL_2404760 | NSP3 | hCoV-19/USA/OR-TRACE-DESC-050921-704/2021 | Y | 1595 | insT | 4 | 20210509 |
| EPI_ISL_12223848 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0836/2022 | Y | 1595 | S | 4 | 20220110 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | Y | 1595 | F | 2 | 20221201 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | Y | 1595 | I | 2 | 20210806 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | Y | 1595 | W | 1 | 20211225 |
| EPI_ISL_19501820 | NSP3 | hCoV-19/France/IDF-IPP11574/2024 | Y | 1595 | C | 185 | 20241007 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Y | 1595 | D | 5 | 20221226 |
| EPI_ISL_7314067 | NSP3 | hCoV-19/USA/ID-IBL-770144/2021 | Y | 1595 | insDVL | 1 | 20211109 |
| EPI_ISL_15292714 | NSP3 | hCoV-19/India/MH-NCCS-2748700699199/2021 | Y | 1595 | L | 9 | 20211212 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | Y | 1595 | insRRLstopFINLYDVLQ | 1 | 20210804 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | Y | 1595 | Q | 1 | 20230213 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | Y | 1595 | V | 17 | 20230127 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | Y | 1595 | A | 8 | 20220324 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | K | 1596 | insstopstop | 1 | 20220202 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | K | 1596 | N | 39 | 20240315 |
| EPI_ISL_19280285 | NSP3 | hCoV-19/USA/UT-UPHL-240719250772/2024 | K | 1596 | R | 160 | 20240706 |
| EPI_ISL_426880 | NSP3 | hCoV-19/Australia/VIC909/2020 | K | 1596 | insLstopFFNLYDVTNVI | 1 | 20200323 |
| EPI_ISL_15334776 | NSP3 | hCoV-19/Chile/AR-115262/2022 | K | 1596 | E | 5 | 20220927 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | K | 1596 | M | 2 | 20210806 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 1596 | V | 5 | 20230104 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | K | 1596 | insVI | 15 | 20240315 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | K | 1596 | I | 10 | 20220819 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | K | 1596 | L | 4 | 20210806 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | K | 1596 | insVLQTstopstop | 1 | 20210805 |
| EPI_ISL_18335665 | NSP3 | hCoV-19/USA/MI-SHMSU-G08_I_0078_75/2023 | K | 1596 | T | 14 | 20230623 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | K | 1596 | C | 9 | 20220324 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | K | 1596 | G | 34 | 20210917 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | K | 1596 | W | 10 | 20230401 |
| EPI_ISL_14419650 | NSP3 | hCoV-19/Germany/TH-RKI-I-942699/2022 | K | 1596 | S | 1 | 20220723 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | K | 1596 | del | 57 | 20230424 |
| EPI_ISL_16394739 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2418/2022 | K | 1596 | D | 2 | 20221220 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | K | 1596 | insNVI | 1 | 20220210 |
| EPI_ISL_7509807 | NSP3 | hCoV-19/USA/CA-CSMC703/2020 | K | 1596 | A | 1 | 20200915 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | K | 1596 | insTstopstop | 4 | 20211031 |
| EPI_ISL_8718064 | NSP3 | hCoV-19/USA/ID-IBL-781488/2021 | K | 1596 | insLstopFINLYDVLQ | 3 | 20211228 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | K | 1596 | insQ | 1 | 20220112 |
| EPI_ISL_18327175 | NSP3 | hCoV-19/France/PAC-HCL723001221001/2023 | K | 1596 | Q | 6 | 20230918 |
| EPI_ISL_10678720 | NSP3 | hCoV-19/Turkey/HSGM-G1487/2022 | K | 1596 | stop | 1 | 20220214 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | K | 1596 | insLstopFINLYDVLQTstopstop | 1 | 20210812 |
| EPI_ISL_7638051 | NSP3 | hCoV-19/Greece/42011/2021 | R | 1597 | Q | 1 | 20211129 |
| EPI_ISL_18712823 | NSP3 | hCoV-19/Slovenia/IMI-V0-20983/2023 | R | 1597 | C | 115 | 20231212 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | R | 1597 | E | 35 | 20240315 |
| EPI_ISL_7508765 | NSP3 | hCoV-19/USA/CA-CSMC251/2021 | R | 1597 | insstopFINLY | 1 | 20210213 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | R | 1597 | T | 9 | 20220128 |
| EPI_ISL_8804023 | NSP3 | hCoV-19/India/MH-NCCS-2748700533022/2021 | R | 1597 | insCVVV | 1 | 20210717 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | R | 1597 | V | 9 | 20230213 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | R | 1597 | del | 51 | 20230424 |
| EPI_ISL_12934197 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010422-1490/2022 | R | 1597 | insstopstop | 1 | 20220104 |
| EPI_ISL_18329659 | NSP3 | hCoV-19/USA/IL-C23WGS2652/2023 | R | 1597 | H | 27 | 20230727 |
| EPI_ISL_17466166 | NSP3 | hCoV-19/India/CT-AIIMSR-VRDL-INSACOG-1165/2023 | R | 1597 | L | 319 | 20230404 |
| EPI_ISL_12934291 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-122221-1511/2021 | R | 1597 | insstopstopS | 3 | 20211222 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | R | 1597 | Y | 1 | 20210806 |
| EPI_ISL_15292714 | NSP3 | hCoV-19/India/MH-NCCS-2748700699199/2021 | R | 1597 | insCVLV | 2 | 20211212 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | R | 1597 | K | 36 | 20211103 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | R | 1597 | D | 1 | 20210318 |
| EPI_ISL_14378203 | NSP3 | hCoV-19/Germany/NW-RKI-I-916497/2022 | R | 1597 | insNRATRVECIWKSYVHVVDGCNSSTCMMCYKR | 1 | 20220711 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | R | 1597 | F | 6 | 20240205 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | R | 1597 | P | 1 | 20210917 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | R | 1597 | W | 9 | 20230217 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | R | 1597 | insVIE | 3 | 20230127 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | R | 1597 | insLstopLINLYDVLQTstopstopSNK | 1 | 20210801 |
| EPI_ISL_1051606 | NSP3 | hCoV-19/England/OXON-F5E408/2021 | R | 1597 | I | 2 | 20210123 |
| EPI_ISL_9455824 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00318/2022 | R | 1597 | stop | 4 | 20220106 |
| EPI_ISL_17265723 | NSP3 | hCoV-19/Canada/ON-PHL-23-16598/2023 | R | 1597 | S | 13 | 20230309 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | R | 1597 | N | 8 | 20230424 |
| EPI_ISL_3922822 | NSP3 | hCoV-19/USA/ID-IBL-638515/2020 | R | 1597 | A | 1 | 20200801 |
| EPI_ISL_12223872 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0864/2022 | R | 1597 | G | 4 | 20220117 |
| EPI_ISL_18455260 | NSP3 | hCoV-19/env/Ukraine/80244/2023 | N | 1598 | S | 57 | 20230911 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | N | 1598 | F | 1 | 20210917 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | N | 1598 | G | 1 | 20210806 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | N | 1598 | del | 72 | 20230418 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | N | 1598 | L | 1 | 20210416 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | N | 1598 | P | 9 | 20230217 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | N | 1598 | H | 5 | 20221226 |
| EPI_ISL_1178841 | NSP3 | hCoV-19/England/OXON-F6B329/2021 | N | 1598 | insL | 1 | 20210118 |
| EPI_ISL_10814875 | NSP3 | hCoV-19/Israel/ICH-741124061/2022 | N | 1598 | M | 2 | 20220227 |
| EPI_ISL_10397224 | NSP3 | hCoV-19/Turkey/HSGM-G1584/2022 | N | 1598 | I | 5 | 20220214 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | N | 1598 | R | 9 | 20220324 |
| EPI_ISL_15334776 | NSP3 | hCoV-19/Chile/AR-115262/2022 | N | 1598 | A | 1 | 20220927 |
| EPI_ISL_5345802 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-58189/2021 | N | 1598 | K | 6 | 20210824 |
| EPI_ISL_17425897 | NSP3 | hCoV-19/India/MH-CSIR-2934/2023 | N | 1598 | stop | 15 | 20230401 |
| EPI_ISL_14381116 | NSP3 | hCoV-19/Germany/NW-RKI-I-919488/2022 | N | 1598 | insRATRVECTIWKSYVHVVDGCNSSTCMMCYKRN | 1 | 20220711 |
| EPI_ISL_3185939 | NSP3 | hCoV-19/USA/MI-MDHHS-SC29616/2021 | N | 1598 | B | 1 | 20210422 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | N | 1598 | Y | 1 | 20221229 |
| EPI_ISL_17516711 | NSP3 | hCoV-19/USA/SC-MUSC-08278/2022 | N | 1598 | T | 6 | 20220715 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | N | 1598 | Q | 38 | 20240315 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | N | 1598 | D | 14 | 20240205 |
| EPI_ISL_16394739 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2418/2022 | N | 1598 | V | 4 | 20221220 |
| EPI_ISL_1934743 | NSP3 | hCoV-19/South Korea/KDCA3123/2021 | N | 1598 | E | 1 | 20210406 |
| EPI_ISL_19002882 | NSP3 | hCoV-19/Canada/AB-ABPHL-115830/2024 | R | 1599 | I | 19 | 20240311 |
| EPI_ISL_12934197 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010422-1490/2022 | R | 1599 | N | 7 | 20220104 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | R | 1599 | stop | 5 | 20220128 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | R | 1599 | Q | 39 | 20240315 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | R | 1599 | V | 7 | 20221226 |
| EPI_ISL_16394739 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2418/2022 | R | 1599 | H | 1 | 20221220 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | R | 1599 | L | 4 | 20230424 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | R | 1599 | Y | 1 | 20221229 |
| EPI_ISL_13996039 | NSP3 | hCoV-19/env/USA/CA-SEARCH-91082/2022 | R | 1599 | G | 2 | 20220519 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | R | 1599 | C | 2 | 20210416 |
| EPI_ISL_17516711 | NSP3 | hCoV-19/USA/SC-MUSC-08278/2022 | R | 1599 | T | 4 | 20220715 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | R | 1599 | F | 2 | 20220203 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | R | 1599 | del | 71 | 20230418 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | R | 1599 | S | 16 | 20230217 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | R | 1599 | E | 7 | 20240205 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | R | 1599 | W | 1 | 20201214 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | R | 1599 | M | 1 | 20210917 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | R | 1599 | insLLQ | 3 | 20220110 |
| EPI_ISL_3079049 | NSP3 | hCoV-19/England/OXON-FA2AA9/2021 | R | 1599 | insF | 2 | 20210702 |
| EPI_ISL_15292714 | NSP3 | hCoV-19/India/MH-NCCS-2748700699199/2021 | R | 1599 | P | 3 | 20211212 |
| EPI_ISL_18139465 | NSP3 | hCoV-19/Egypt/CPHL-EGY23970/2022 | R | 1599 | K | 26 | 20220815 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | R | 1599 | A | 2 | 20230213 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | A | 1600 | D | 5 | 20240205 |
| EPI_ISL_19784376 | NSP3 | hCoV-19/New Zealand/25YA0628/2025 | A | 1600 | V | 635 | 20250301 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | A | 1600 | I | 1 | 20220203 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | A | 1600 | L | 13 | 20230424 |
| EPI_ISL_7509667 | NSP3 | hCoV-19/USA/CA-CSMC549/2020 | A | 1600 | C | 2 | 20201006 |
| EPI_ISL_19192588 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15984/2024 | A | 1600 | insL | 1 | 20240302 |
| EPI_ISL_19760580 | NSP3 | hCoV-19/Canada/AB-ABPHL-131281/2025 | A | 1600 | T | 62 | 20250212 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | A | 1600 | P | 3 | 20230424 |
| EPI_ISL_9455824 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00318/2022 | A | 1600 | N | 2 | 20220106 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | A | 1600 | E | 47 | 20240315 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | A | 1600 | F | 9 | 20230217 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | A | 1600 | M | 4 | 20220126 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | A | 1600 | Q | 4 | 20210809 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | A | 1600 | del | 75 | 20230418 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | A | 1600 | stop | 1 | 20211228 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | A | 1600 | H | 3 | 20210809 |
| EPI_ISL_12934197 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010422-1490/2022 | A | 1600 | K | 1 | 20220104 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | A | 1600 | Y | 4 | 20221226 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | A | 1600 | G | 1 | 20210806 |
| EPI_ISL_19111375 | NSP3 | hCoV-19/Japan/PG-586725/2023 | A | 1600 | S | 82 | 20231213 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | T | 1601 | F | 1 | 20230424 |
| EPI_ISL_3178735 | NSP3 | hCoV-19/Scotland/OXON-FA555A/2021 | T | 1601 | V | 3 | 20210716 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | T | 1601 | M | 6 | 20220126 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | T | 1601 | P | 1 | 20210806 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | T | 1601 | C | 1 | 20210416 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | T | 1601 | del | 84 | 20230418 |
| EPI_ISL_16394739 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2418/2022 | T | 1601 | L | 6 | 20221220 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | T | 1601 | N | 8 | 20220203 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | T | 1601 | insMES | 1 | 20210802 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | T | 1601 | W | 1 | 20210424 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | T | 1601 | R | 10 | 20230213 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | T | 1601 | S | 53 | 20240315 |
| EPI_ISL_19211762 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-1187/2024 | T | 1601 | A | 13 | 20240528 |
| EPI_ISL_3790633 | NSP3 | hCoV-19/Sweden/10038346/2021 | T | 1601 | G | 3 | 20210323 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | T | 1601 | stop | 9 | 20220324 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 1601 | Y | 1 | 20210801 |
| EPI_ISL_19212845 | NSP3 | hCoV-19/env/India/MH-NCL-239-25/2023 | T | 1601 | D | 4 | 20231225 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | T | 1601 | Q | 21 | 20230424 |
| EPI_ISL_19634829 | NSP3 | hCoV-19/USA/AZ-ASPHL-1962/2024 | T | 1601 | K | 18 | 20241213 |
| EPI_ISL_19826604 | NSP3 | hCoV-19/USA/NY-PRL-250408_82H07/2025 | T | 1601 | I | 2638 | 20250331 |
| EPI_ISL_496913 | NSP3 | hCoV-19/Panama/341259/2020 | R | 1602 | G | 1 | 20200415 |
| EPI_ISL_6900963 | NSP3 | hCoV-19/Finland/THL-202130326/2021 | R | 1602 | T | 6 | 20211011 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | R | 1602 | insQL | 3 | 20210806 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | R | 1602 | F | 7 | 20220324 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | R | 1602 | Q | 14 | 20230104 |
| EPI_ISL_19212845 | NSP3 | hCoV-19/env/India/MH-NCL-239-25/2023 | R | 1602 | S | 11 | 20231225 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | R | 1602 | E | 2 | 20210809 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | R | 1602 | L | 23 | 20240205 |
| EPI_ISL_3079049 | NSP3 | hCoV-19/England/OXON-FA2AA9/2021 | R | 1602 | W | 2 | 20210702 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | R | 1602 | insW | 7 | 20230217 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | R | 1602 | K | 21 | 20230424 |
| EPI_ISL_8813043 | NSP3 | hCoV-19/USA/OR-TRACE-MULT-032721-1187/2021 | R | 1602 | insN | 2 | 20210327 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | R | 1602 | V | 2 | 20230217 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | R | 1602 | C | 11 | 20220127 |
| EPI_ISL_19053947 | NSP3 | hCoV-19/Italy/VEN-IZSVe-24RS8022-2_PD/2024 | R | 1602 | I | 15 | 20240330 |
| EPI_ISL_16304437 | NSP3 | hCoV-19/Japan/RIMD19760/2022 | R | 1602 | stop | 10 | 20220901 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | R | 1602 | N | 47 | 20240315 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | R | 1602 | A | 2 | 20221229 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | R | 1602 | del | 84 | 20230418 |
| EPI_ISL_12934291 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-122221-1511/2021 | R | 1602 | M | 10 | 20211222 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | R | 1602 | H | 5 | 20230424 |
| EPI_ISL_17710059 | NSP3 | hCoV-19/India/UP-MRU-ICMR-19/2023 | V | 1603 | M | 15 | 20230429 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | V | 1603 | R | 2 | 20220126 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 1603 | C | 3 | 20221226 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | V | 1603 | Y | 9 | 20220203 |
| EPI_ISL_19212845 | NSP3 | hCoV-19/env/India/MH-NCL-239-25/2023 | V | 1603 | E | 6 | 20231225 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | V | 1603 | S | 13 | 20240205 |
| EPI_ISL_19327645 | NSP3 | hCoV-19/Spain/CT-HUGTiP-F1R191/2024 | V | 1603 | A | 39 | 20240731 |
| EPI_ISL_5384017 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-64657/2021 | V | 1603 | D | 2 | 20210922 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | V | 1603 | stop | 2 | 20230217 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | V | 1603 | L | 48 | 20230424 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | V | 1603 | del | 43 | 20230418 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | V | 1603 | T | 3 | 20230213 |
| EPI_ISL_19332768 | NSP3 | hCoV-19/Denmark/DCGC-687809/2024 | V | 1603 | F | 43 | 20240715 |
| EPI_ISL_18139465 | NSP3 | hCoV-19/Egypt/CPHL-EGY23970/2022 | V | 1603 | G | 1 | 20220815 |
| EPI_ISL_9046221 | NSP3 | hCoV-19/Peru/JUN-INS-12902/2021 | V | 1603 | N | 3 | 20211223 |
| EPI_ISL_922193 | NSP3 | hCoV-19/England/OXON-F4EFBF/2021 | V | 1603 | P | 1 | 20210107 |
| EPI_ISL_19826789 | NSP3 | hCoV-19/USA/MN-MDH-46652/2025 | V | 1603 | I | 941 | 20250311 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | V | 1603 | W | 1 | 20220804 |
| EPI_ISL_14554185 | NSP3 | hCoV-19/France/GES-HMN-22082080219/2022 | E | 1604 | A | 5 | 20220801 |
| EPI_ISL_15292774 | NSP3 | hCoV-19/India/GA-NCCS-3055100282758/2021 | E | 1604 | S | 4 | 20211221 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | E | 1604 | L | 6 | 20210806 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | E | 1604 | M | 49 | 20220127 |
| EPI_ISL_17614849 | NSP3 | hCoV-19/USA/NJ-GBW-H20-280-9972/2023 | E | 1604 | stop | 325 | 20230425 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | E | 1604 | T | 3 | 20230424 |
| EPI_ISL_19795459 | NSP3 | hCoV-19/Brazil/SP-LEIAL4611/2025 | E | 1604 | Q | 81 | 20250221 |
| EPI_ISL_19588832 | NSP3 | hCoV-19/Singapore/R46MQ3/2024 | E | 1604 | D | 54 | 20240725 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | E | 1604 | V | 3 | 20221226 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | E | 1604 | R | 12 | 20220202 |
| EPI_ISL_15760469 | NSP3 | hCoV-19/England/PHEC-YY8CN6N/2022 | E | 1604 | G | 22 | 20221027 |
| EPI_ISL_427289 | NSP3 | hCoV-19/USA/OH-OSUP0014/2020 | E | 1604 | insG | 1 | 20200331 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | E | 1604 | del | 43 | 20230418 |
| EPI_ISL_16258484 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1990/2022 | E | 1604 | H | 5 | 20220801 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | E | 1604 | W | 2 | 20210801 |
| EPI_ISL_19212845 | NSP3 | hCoV-19/env/India/MH-NCL-239-25/2023 | E | 1604 | P | 4 | 20231225 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | E | 1604 | N | 16 | 20220324 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | E | 1604 | insYCstopWCstopKVLL | 1 | 20211031 |
| EPI_ISL_12934291 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-122221-1511/2021 | E | 1604 | insYCstopW | 4 | 20211222 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | E | 1604 | K | 10 | 20230217 |
| EPI_ISL_18877941 | NSP3 | hCoV-19/Senegal/25577147/2024 | E | 1604 | Z | 11 | 20240112 |
| EPI_ISL_7509807 | NSP3 | hCoV-19/USA/CA-CSMC703/2020 | C | 1605 | D | 1 | 20200915 |
| EPI_ISL_16706248 | NSP3 | hCoV-19/Canada/AB-ABPHL-90582/2022 | C | 1605 | S | 7 | 20221228 |
| EPI_ISL_18139465 | NSP3 | hCoV-19/Egypt/CPHL-EGY23970/2022 | C | 1605 | stop | 3 | 20220815 |
| EPI_ISL_16258484 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1990/2022 | C | 1605 | N | 2 | 20220801 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | C | 1605 | del | 43 | 20230418 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | C | 1605 | Y | 5 | 20220804 |
| EPI_ISL_12955775 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748299/2022 | C | 1605 | W | 3 | 20220227 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | C | 1605 | insMLstop | 36 | 20210419 |
| EPI_ISL_8035693 | NSP3 | hCoV-19/Pakistan/Nano B3 S-07/2021 | C | 1605 | B | 1 | 20211211 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | C | 1605 | F | 12 | 20230424 |
| EPI_ISL_922298 | NSP3 | hCoV-19/England/OXON-F52158/2020 | C | 1605 | Q | 1 | 20201230 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | C | 1605 | L | 56 | 20240315 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1605 | P | 1 | 20210318 |
| EPI_ISL_1051606 | NSP3 | hCoV-19/England/OXON-F5E408/2021 | C | 1605 | I | 4 | 20210123 |
| EPI_ISL_12582717 | NSP3 | hCoV-19/Turkey/HSGM-G8459/2022 | C | 1605 | G | 3 | 20220401 |
| EPI_ISL_15320649 | NSP3 | hCoV-19/France/BRE-HMN-22092230422/2022 | C | 1605 | R | 7 | 20220919 |
| EPI_ISL_19212845 | NSP3 | hCoV-19/env/India/MH-NCL-239-25/2023 | C | 1605 | V | 5 | 20231225 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | C | 1605 | A | 1 | 20201214 |
| EPI_ISL_15292714 | NSP3 | hCoV-19/India/MH-NCCS-2748700699199/2021 | C | 1605 | K | 3 | 20211212 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1605 | M | 10 | 20220210 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | T | 1606 | Y | 26 | 20220804 |
| EPI_ISL_17057379 | NSP3 | hCoV-19/USA/TX-UTEP-B002477813/2022 | T | 1606 | N | 4 | 20220223 |
| EPI_ISL_12955775 | NSP3 | hCoV-19/Russia/LIP-CRIE-7733748299/2022 | T | 1606 | stop | 7 | 20220227 |
| EPI_ISL_19695162 | NSP3 | hCoV-19/Denmark/DCGC-691688/2025 | T | 1606 | K | 97 | 20250106 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | T | 1606 | S | 16 | 20240205 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | T | 1606 | L | 48 | 20240315 |
| EPI_ISL_19373670 | NSP3 | hCoV-19/New Zealand/24YA6501/2024 | T | 1606 | A | 194 | 20240821 |
| EPI_ISL_15292774 | NSP3 | hCoV-19/India/GA-NCCS-3055100282758/2021 | T | 1606 | V | 9 | 20211221 |
| EPI_ISL_19769527 | NSP3 | hCoV-19/Japan/FR038-0032/2025 | T | 1606 | I | 1063 | 20250203 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 1606 | C | 7 | 20230104 |
| EPI_ISL_3079178 | NSP3 | hCoV-19/Scotland/OXON-FA36B3/2021 | T | 1606 | Q | 4 | 20210703 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | T | 1606 | G | 2 | 20230213 |
| EPI_ISL_16258484 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1990/2022 | T | 1606 | F | 2 | 20220801 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | T | 1606 | R | 1 | 20210416 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1606 | H | 1 | 20210318 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | T | 1606 | insCstopWRstop | 1 | 20211031 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | T | 1606 | del | 41 | 20230418 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | T | 1607 | insGT | 1 | 20230213 |
| EPI_ISL_7547071 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-100421-1035/2021 | T | 1607 | G | 1 | 20211004 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | T | 1607 | R | 5 | 20230424 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | T | 1607 | L | 49 | 20240315 |
| EPI_ISL_18077235 | NSP3 | hCoV-19/USA/AK-PHL24775/2023 | T | 1607 | A | 6 | 20230409 |
| EPI_ISL_19560656 | NSP3 | hCoV-19/Brazil/SP-IAL-357940936/2024 | T | 1607 | S | 34 | 20240911 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | T | 1607 | D | 7 | 20220324 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | T | 1607 | V | 38 | 20210916 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | T | 1607 | insstopWP | 1 | 20220112 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | T | 1607 | K | 19 | 20240205 |
| EPI_ISL_17454452 | NSP3 | hCoV-19/Puerto Rico/RCMI-ADMV6CLU/2022 | T | 1607 | I | 13 | 20221215 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | T | 1607 | del | 39 | 20230418 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | T | 1607 | insTRQ | 1 | 20230424 |
| EPI_ISL_11582592 | NSP3 | hCoV-19/France/GES-HMN-22032081102/2022 | T | 1607 | N | 14 | 20220228 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | T | 1607 | W | 2 | 20220118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1607 | M | 2 | 20220210 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | T | 1607 | F | 2 | 20220804 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 1607 | stop | 7 | 20230104 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | T | 1607 | P | 3 | 20210801 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | T | 1607 | Q | 4 | 20220203 |
| EPI_ISL_8803764 | NSP3 | hCoV-19/India/GA-NCCS-3055200157331/2021 | T | 1607 | insXXXX | 1 | 20210803 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | I | 1608 | D | 2 | 20230217 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | I | 1608 | R | 1 | 20211115 |
| EPI_ISL_18483654 | NSP3 | hCoV-19/Chile/RM-81969/2023 | I | 1608 | L | 56 | 20231023 |
| EPI_ISL_427289 | NSP3 | hCoV-19/USA/OH-OSUP0014/2020 | I | 1608 | C | 1 | 20200331 |
| EPI_ISL_19212845 | NSP3 | hCoV-19/env/India/MH-NCL-239-25/2023 | I | 1608 | G | 2 | 20231225 |
| EPI_ISL_18233656 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48069/2023 | I | 1608 | V | 66 | 20230817 |
| EPI_ISL_17763802 | NSP3 | hCoV-19/USA/TX-HMH-129034/2023 | I | 1608 | F | 6 | 20230514 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | I | 1608 | E | 5 | 20240205 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | I | 1608 | del | 34 | 20230418 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | I | 1608 | Y | 9 | 20220202 |
| EPI_ISL_8812984 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1238/2021 | I | 1608 | stop | 1 | 20211104 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | I | 1608 | N | 5 | 20210809 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | I | 1608 | M | 48 | 20240315 |
| EPI_ISL_10944012 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8849/2022 | I | 1608 | Q | 1 | 20220208 |
| EPI_ISL_7551912 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-090821-1093/2021 | I | 1608 | W | 1 | 20210908 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | I | 1608 | P | 3 | 20230424 |
| EPI_ISL_13960902 | NSP3 | hCoV-19/Israel/SMC-7091156/2022 | I | 1608 | T | 13 | 20220712 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | I | 1608 | insstopF | 1 | 20210416 |
| EPI_ISL_3922822 | NSP3 | hCoV-19/USA/ID-IBL-638515/2020 | I | 1608 | K | 1 | 20200801 |
| EPI_ISL_18546596 | NSP3 | hCoV-19/USA/TX-HMH-M-135180/2023 | I | 1608 | J | 9 | 20231024 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | I | 1608 | S | 19 | 20230217 |
| EPI_ISL_19071018 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6708/2024 | V | 1609 | A | 29 | 20240312 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | V | 1609 | stop | 13 | 20230104 |
| EPI_ISL_19483788 | NSP3 | hCoV-19/USA/CO-CDPHE-42322848/2024 | V | 1609 | F | 211 | 20240903 |
| EPI_ISL_3923035 | NSP3 | hCoV-19/USA/ID-IBL-748919/2021 | V | 1609 | Y | 1 | 20210812 |
| EPI_ISL_16258484 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1990/2022 | V | 1609 | H | 2 | 20220801 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | V | 1609 | del | 38 | 20230418 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | V | 1609 | insL | 8 | 20240315 |
| EPI_ISL_19347196 | NSP3 | hCoV-19/USA/NY-CDC-LC1112061/2024 | V | 1609 | I | 261 | 20240730 |
| EPI_ISL_1249201 | NSP3 | hCoV-19/England/OXON-F705C1/2021 | V | 1609 | E | 1 | 20210222 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | V | 1609 | N | 2 | 20211115 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | V | 1609 | S | 10 | 20240205 |
| EPI_ISL_12934441 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-020222-1661/2022 | V | 1609 | C | 8 | 20220202 |
| EPI_ISL_12560743 | NSP3 | hCoV-19/Indonesia/BT-NIHRD-MI_22_31401/2022 | V | 1609 | G | 3 | 20220402 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | V | 1609 | K | 1 | 20230217 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | V | 1609 | T | 1 | 20230213 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 1609 | L | 53 | 20230217 |
| EPI_ISL_18501337 | NSP3 | hCoV-19/Chile/VS-74717/2023 | N | 1610 | K | 35 | 20230925 |
| EPI_ISL_19635842 | NSP3 | hCoV-19/Japan/FR035-0463/2024 | N | 1610 | Y | 6 | 20241008 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | N | 1610 | Q | 12 | 20230217 |
| EPI_ISL_19667091 | NSP3 | hCoV-19/Denmark/DCGC-691436/2024 | N | 1610 | S | 1069 | 20241223 |
| EPI_ISL_18617619 | NSP3 | hCoV-19/Denmark/DCGC-665775/2023 | N | 1610 | B | 7 | 20231204 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | N | 1610 | insTstopstop | 7 | 20220324 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | N | 1610 | V | 1 | 20210815 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | N | 1610 | A | 1 | 20230217 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | N | 1610 | E | 16 | 20240315 |
| EPI_ISL_13275654 | NSP3 | hCoV-19/Australia/VIC60884/2022 | N | 1610 | G | 1 | 20220519 |
| EPI_ISL_4945821 | NSP3 | hCoV-19/Morocco/FMP-351/2021 | N | 1610 | I | 5 | 20210722 |
| EPI_ISL_18475022 | NSP3 | hCoV-19/USA/RI-RISHL-059584/2023 | N | 1610 | T | 14 | 20230929 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | N | 1610 | H | 58 | 20230217 |
| EPI_ISL_7547071 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-100421-1035/2021 | N | 1610 | M | 4 | 20211004 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | N | 1610 | del | 70 | 20230418 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | N | 1610 | L | 6 | 20220112 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | N | 1610 | stop | 18 | 20220203 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | N | 1610 | D | 6 | 20230213 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | N | 1610 | R | 3 | 20211115 |
| EPI_ISL_15292774 | NSP3 | hCoV-19/India/GA-NCCS-3055100282758/2021 | G | 1611 | M | 2 | 20211221 |
| EPI_ISL_17740879 | NSP3 | hCoV-19/South Korea/KDCA238897/2023 | G | 1611 | A | 8 | 20230510 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | G | 1611 | W | 6 | 20220128 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | G | 1611 | T | 2 | 20211031 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | G | 1611 | C | 15 | 20230217 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | G | 1611 | Q | 37 | 20210806 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | G | 1611 | P | 2 | 20230424 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | G | 1611 | Y | 7 | 20240205 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1611 | I | 1 | 20210318 |
| EPI_ISL_18455259 | NSP3 | hCoV-19/env/Ukraine/80234/2023 | G | 1611 | V | 26 | 20230814 |
| EPI_ISL_15724670 | NSP3 | hCoV-19/Turkey/KSS-KSS4872510902/2022 | G | 1611 | S | 34 | 20221101 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | G | 1611 | E | 3 | 20210806 |
| EPI_ISL_16258484 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1990/2022 | G | 1611 | K | 3 | 20220801 |
| EPI_ISL_8035693 | NSP3 | hCoV-19/Pakistan/Nano B3 S-07/2021 | G | 1611 | stop | 1 | 20211211 |
| EPI_ISL_18501337 | NSP3 | hCoV-19/Chile/VS-74717/2023 | G | 1611 | L | 2 | 20230925 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | G | 1611 | del | 94 | 20230418 |
| EPI_ISL_11584304 | NSP3 | hCoV-19/Russia/TAM-CRIE-S_7720153076/2022 | G | 1611 | D | 9 | 20220112 |
| EPI_ISL_11584306 | NSP3 | hCoV-19/Russia/TAM-CRIE-S_7720155037/2022 | G | 1611 | R | 6 | 20220113 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | G | 1611 | H | 2 | 20230217 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | V | 1612 | insGMDVLQTstopstopSN | 1 | 20210806 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | V | 1612 | T | 6 | 20230424 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | V | 1612 | P | 11 | 20240315 |
| EPI_ISL_18455259 | NSP3 | hCoV-19/env/Ukraine/80234/2023 | V | 1612 | L | 107 | 20230814 |
| EPI_ISL_1309760 | NSP3 | hCoV-19/England/OXON-F7614F/2021 | V | 1612 | Y | 1 | 20210213 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | V | 1612 | C | 8 | 20220128 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | V | 1612 | insstop | 1 | 20210809 |
| EPI_ISL_16258484 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1990/2022 | V | 1612 | M | 3 | 20220801 |
| EPI_ISL_19715296 | NSP3 | hCoV-19/Wales/CLIMB-CM7YMWME/2025 | V | 1612 | I | 615 | 20250127 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | V | 1612 | del | 70 | 20230418 |
| EPI_ISL_427289 | NSP3 | hCoV-19/USA/OH-OSUP0014/2020 | V | 1612 | stop | 1 | 20200331 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | V | 1612 | S | 6 | 20230217 |
| EPI_ISL_19274593 | NSP3 | hCoV-19/New Zealand/24YA5203/2024 | V | 1612 | A | 361 | 20240612 |
| EPI_ISL_3796463 | NSP3 | hCoV-19/Sweden/101504536/2021 | V | 1612 | insVstopCVstopTstopstopSN | 1 | 20210329 |
| EPI_ISL_10045285 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344723/2022 | V | 1612 | D | 4 | 20220207 |
| EPI_ISL_18884250 | NSP3 | hCoV-19/Malaysia/MKAK_CL_2868/2024 | V | 1612 | G | 21 | 20240104 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | V | 1612 | insTH | 6 | 20240205 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | V | 1612 | K | 3 | 20230217 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | V | 1612 | N | 17 | 20220324 |
| EPI_ISL_12934291 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-122221-1511/2021 | V | 1612 | insCstopW | 3 | 20211222 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | V | 1612 | insG | 1 | 20210801 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | V | 1612 | insVstopCVQTstopstopSN | 35 | 20210419 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | V | 1612 | Q | 3 | 20210806 |
| EPI_ISL_19520390 | NSP3 | hCoV-19/Canada/BC-BCCDC-742734/2024 | V | 1612 | F | 225 | 20241011 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | R | 1613 | del | 65 | 20230418 |
| EPI_ISL_1475659 | NSP3 | hCoV-19/Wales/OXON-F7AA31/2021 | R | 1613 | insV | 1 | 20210308 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | R | 1613 | insCLCstop | 1 | 20200807 |
| EPI_ISL_10082865 | NSP3 | hCoV-19/USA/TN-ASC-210586090/2021 | R | 1613 | G | 3 | 20211226 |
| EPI_ISL_15292774 | NSP3 | hCoV-19/India/GA-NCCS-3055100282758/2021 | R | 1613 | L | 7 | 20211221 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | R | 1613 | Q | 6 | 20211031 |
| EPI_ISL_16336896 | NSP3 | hCoV-19/Russia/SAR-RII-MH122535S/2022 | R | 1613 | I | 10 | 20221107 |
| EPI_ISL_1475659 | NSP3 | hCoV-19/Wales/OXON-F7AA31/2021 | R | 1613 | A | 1 | 20210308 |
| EPI_ISL_16515618 | NSP3 | hCoV-19/England/BRBR-326902D3/2023 | R | 1613 | S | 4 | 20230106 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | R | 1613 | Y | 1 | 20230213 |
| EPI_ISL_19413747 | NSP3 | hCoV-19/Japan/FR021-0817/2024 | R | 1613 | K | 354 | 20240827 |
| EPI_ISL_18322366 | NSP3 | hCoV-19/USA/TX-HMH-M-133440/2023 | R | 1613 | stop | 9 | 20230906 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | R | 1613 | H | 2 | 20210526 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | R | 1613 | D | 2 | 20230424 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | R | 1613 | M | 1 | 20230217 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | R | 1613 | F | 13 | 20240315 |
| EPI_ISL_19611299 | NSP3 | hCoV-19/env/Germany/BY-LGL-6432442/2024 | R | 1613 | T | 4 | 20241127 |
| EPI_ISL_18455259 | NSP3 | hCoV-19/env/Ukraine/80234/2023 | R | 1613 | E | 58 | 20230814 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | R | 1614 | Y | 2 | 20210526 |
| EPI_ISL_15794194 | NSP3 | hCoV-19/Israel/ICH-741190436/2022 | R | 1614 | insYWRstop | 17 | 20221101 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | R | 1614 | N | 1 | 20210818 |
| EPI_ISL_17592081 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3010/2023 | R | 1614 | insL | 1 | 20230408 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | R | 1614 | del | 64 | 20230418 |
| EPI_ISL_3756621 | NSP3 | hCoV-19/USA/ID-IBL-744725/2021 | R | 1614 | C | 1 | 20210802 |
| EPI_ISL_11495800 | NSP3 | hCoV-19/USA/TN-ASC-210860776/2022 | R | 1614 | insYWRstopLstopstopLYAHLstopQSstopKHDTP | 2 | 20220217 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | R | 1614 | V | 3 | 20211115 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | R | 1614 | E | 10 | 20230217 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | R | 1614 | Q | 3 | 20230424 |
| EPI_ISL_19822821 | NSP3 | hCoV-19/Denmark/DCGC-692091/2025 | R | 1614 | K | 1179 | 20250317 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | R | 1614 | T | 8 | 20230424 |
| EPI_ISL_18455259 | NSP3 | hCoV-19/env/Ukraine/80234/2023 | R | 1614 | G | 61 | 20230814 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 1614 | L | 3 | 20220210 |
| EPI_ISL_12830590 | NSP3 | hCoV-19/USA/SC-MUSC-06974/2022 | R | 1614 | W | 4 | 20220304 |
| EPI_ISL_12934291 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-122221-1511/2021 | R | 1614 | stop | 4 | 20211222 |
| EPI_ISL_19499081 | NSP3 | hCoV-19/USA/TX-HMH-M-146460/2024 | R | 1614 | S | 96 | 20240913 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | R | 1614 | M | 22 | 20240315 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | S | 1615 | Q | 1 | 20210424 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | S | 1615 | E | 6 | 20211115 |
| EPI_ISL_18038961 | NSP3 | hCoV-19/South Korea/KDCA-251724/2023 | S | 1615 | C | 45 | 20230701 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | S | 1615 | Y | 3 | 20230217 |
| EPI_ISL_15292774 | NSP3 | hCoV-19/India/GA-NCCS-3055100282758/2021 | S | 1615 | G | 2 | 20211221 |
| EPI_ISL_19585679 | NSP3 | hCoV-19/USA/MN-MDH-44266/2024 | S | 1615 | P | 237 | 20241109 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | S | 1615 | insstop | 1 | 20210806 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | S | 1615 | T | 11 | 20240205 |
| EPI_ISL_1077253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-22725/2020 | S | 1615 | insNVQ | 1 | 20201230 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | S | 1615 | R | 58 | 20220324 |
| EPI_ISL_1475659 | NSP3 | hCoV-19/Wales/OXON-F7AA31/2021 | S | 1615 | M | 1 | 20210308 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | S | 1615 | H | 17 | 20230217 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | S | 1615 | V | 7 | 20220128 |
| EPI_ISL_3922822 | NSP3 | hCoV-19/USA/ID-IBL-638515/2020 | S | 1615 | insNVQLLLMVLEGP | 1 | 20200801 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | S | 1615 | K | 1 | 20230424 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | S | 1615 | del | 44 | 20230418 |
| EPI_ISL_5484223 | NSP3 | hCoV-19/England/PHEC-3M0A4M07/2021 | S | 1615 | D | 1 | 20211016 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | S | 1615 | L | 11 | 20230217 |
| EPI_ISL_18269821 | NSP3 | hCoV-19/USA/CA-CDPH-500121523/2023 | S | 1615 | F | 17 | 20230730 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | S | 1615 | A | 8 | 20230213 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | F | 1616 | Y | 10 | 20240205 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1616 | T | 1 | 20220210 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | F | 1616 | insG | 7 | 20240205 |
| EPI_ISL_1309760 | NSP3 | hCoV-19/England/OXON-F7614F/2021 | F | 1616 | W | 1 | 20210213 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | F | 1616 | M | 73 | 20240315 |
| EPI_ISL_19702452 | NSP3 | hCoV-19/Canada/ON-PHL-202502965/2025 | F | 1616 | L | 52 | 20250126 |
| EPI_ISL_10823351 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81080/2022 | F | 1616 | insTSI | 1 | 20220115 |
| EPI_ISL_8035693 | NSP3 | hCoV-19/Pakistan/Nano B3 S-07/2021 | F | 1616 | E | 1 | 20211211 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | F | 1616 | I | 2 | 20230217 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | F | 1616 | del | 40 | 20230424 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | F | 1616 | G | 4 | 20230217 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | F | 1616 | K | 1 | 20210818 |
| EPI_ISL_19559502 | NSP3 | hCoV-19/France/IDF-HMN-23052240457/2023 | F | 1616 | S | 11 | 20230524 |
| EPI_ISL_1097027 | NSP3 | hCoV-19/Egypt/MASRI-012/2020 | F | 1616 | insS | 1 | 20200608 |
| EPI_ISL_7793728 | NSP3 | hCoV-19/South Korea/KDCA20790/2021 | F | 1616 | V | 7 | 20211117 |
| EPI_ISL_18233656 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48069/2023 | F | 1616 | C | 23 | 20230817 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | F | 1616 | insCstopLstop | 1 | 20211031 |
| EPI_ISL_15292774 | NSP3 | hCoV-19/India/GA-NCCS-3055100282758/2021 | F | 1616 | P | 2 | 20211221 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | F | 1616 | stop | 2 | 20210921 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | F | 1616 | N | 5 | 20230217 |
| EPI_ISL_2544196 | NSP3 | hCoV-19/Pakistan/PPHRL-AH58/2021 | F | 1616 | D | 1 | 20210424 |
| EPI_ISL_1309760 | NSP3 | hCoV-19/England/OXON-F7614F/2021 | F | 1616 | insstop | 1 | 20210213 |
| EPI_ISL_10858375 | NSP3 | hCoV-19/Turkey/HSGM-G2095/2022 | Y | 1617 | stop | 3 | 20220217 |
| EPI_ISL_9511325 | NSP3 | hCoV-19/South Korea/KDCA27421/2022 | Y | 1617 | N | 3 | 20220107 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | Y | 1617 | H | 5 | 20230217 |
| EPI_ISL_12321724 | NSP3 | hCoV-19/Turkey/HSGM-GS2536/2022 | Y | 1617 | C | 1 | 20220405 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | Y | 1617 | M | 35 | 20230408 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | Y | 1617 | del | 41 | 20230424 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | Y | 1617 | E | 1 | 20210818 |
| EPI_ISL_10823351 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81080/2022 | Y | 1617 | S | 4 | 20220115 |
| EPI_ISL_5484223 | NSP3 | hCoV-19/England/PHEC-3M0A4M07/2021 | Y | 1617 | P | 1 | 20211016 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | Y | 1617 | insRstopR | 2 | 20220210 |
| EPI_ISL_8803756 | NSP3 | hCoV-19/India/MH-NCCS-56268/2021 | Y | 1617 | V | 2 | 20210809 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1617 | Q | 1 | 20220210 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | Y | 1617 | D | 8 | 20230213 |
| EPI_ISL_12639652 | NSP3 | hCoV-19/USA/LA-OD-6274531935/2022 | Y | 1617 | W | 4 | 20220427 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | Y | 1617 | T | 1 | 20210815 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 1617 | I | 18 | 20230217 |
| EPI_ISL_1097027 | NSP3 | hCoV-19/Egypt/MASRI-012/2020 | Y | 1617 | R | 1 | 20200608 |
| EPI_ISL_9455824 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00318/2022 | Y | 1617 | insC | 1 | 20220106 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | Y | 1617 | insMEVK | 1 | 20240315 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | Y | 1617 | F | 34 | 20240205 |
| EPI_ISL_7547071 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-100421-1035/2021 | Y | 1617 | K | 4 | 20211004 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | Y | 1617 | L | 23 | 20240315 |
| EPI_ISL_18936239 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00123/2023 | V | 1618 | del | 37 | 20230418 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 1618 | M | 27 | 20230217 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | V | 1618 | stop | 1 | 20221201 |
| EPI_ISL_14749457 | NSP3 | hCoV-19/India/OR-ILSGS17681/2022 | V | 1618 | C | 7 | 20220704 |
| EPI_ISL_16578123 | NSP3 | hCoV-19/South Africa/NICD-N51479/2022 | V | 1618 | A | 11 | 20221125 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | V | 1618 | E | 1 | 20210817 |
| EPI_ISL_12319508 | NSP3 | hCoV-19/Turkey/HSGM-3GS1302/2022 | V | 1618 | D | 1 | 20220312 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | V | 1618 | S | 36 | 20230408 |
| EPI_ISL_17527163 | NSP3 | hCoV-19/Sweden/03_SE600_500000138375SP/2022 | V | 1618 | insstop | 1 | 20221229 |
| EPI_ISL_14505206 | NSP3 | hCoV-19/Slovenia/23-039717-MB/2022 | V | 1618 | F | 4 | 20220801 |
| EPI_ISL_9973519 | NSP3 | hCoV-19/France/GES-HMN-22012250459/2022 | V | 1618 | T | 4 | 20220117 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1618 | Q | 1 | 20220210 |
| EPI_ISL_14954510 | NSP3 | hCoV-19/USA/TX-HMH-M-114683/2022 | V | 1618 | insEVKA | 6 | 20220904 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | V | 1618 | L | 13 | 20230217 |
| EPI_ISL_19473786 | NSP3 | hCoV-19/South Korea/KDCA295831/2024 | V | 1618 | I | 113 | 20240909 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | V | 1618 | N | 60 | 20220324 |
| EPI_ISL_5484223 | NSP3 | hCoV-19/England/PHEC-3M0A4M07/2021 | V | 1618 | K | 1 | 20211016 |
| EPI_ISL_10823351 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81080/2022 | Y | 1619 | D | 3 | 20220115 |
| EPI_ISL_17527163 | NSP3 | hCoV-19/Sweden/03_SE600_500000138375SP/2022 | Y | 1619 | V | 2 | 20221229 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | Y | 1619 | A | 2 | 20230424 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | Y | 1619 | del | 47 | 20230424 |
| EPI_ISL_14749457 | NSP3 | hCoV-19/India/OR-ILSGS17681/2022 | Y | 1619 | L | 14 | 20220704 |
| EPI_ISL_19831417 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56918/2025 | Y | 1619 | H | 325 | 20250324 |
| EPI_ISL_7547072 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091721-1036/2021 | Y | 1619 | I | 1 | 20210917 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | Y | 1619 | insIstopWRstopK | 1 | 20210815 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | Y | 1619 | T | 5 | 20230217 |
| EPI_ISL_5484223 | NSP3 | hCoV-19/England/PHEC-3M0A4M07/2021 | Y | 1619 | G | 1 | 20211016 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | Y | 1619 | R | 1 | 20201214 |
| EPI_ISL_2155360 | NSP3 | hCoV-19/Italy/SAR-Cagliari172/2021 | Y | 1619 | W | 1 | 20210514 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | Y | 1619 | E | 5 | 20230127 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | Y | 1619 | insCstopWCstopKVLLCL | 1 | 20210114 |
| EPI_ISL_16350439 | NSP3 | hCoV-19/Denmark/DCGC-631142/2022 | Y | 1619 | S | 19 | 20221223 |
| EPI_ISL_17372604 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2645/2022 | Y | 1619 | stop | 6 | 20221201 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | Y | 1619 | F | 42 | 20240315 |
| EPI_ISL_18548158 | NSP3 | hCoV-19/USA/MA-CDC-QDX87635481/2023 | Y | 1619 | C | 42 | 20231111 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | Y | 1619 | M | 37 | 20230408 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1619 | Q | 3 | 20220210 |
| EPI_ISL_19371833 | NSP3 | hCoV-19/USA/VA-VCUVAS3-ITUX485510/2024 | Y | 1619 | N | 13 | 20240812 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | A | 1620 | insstopWCstopKVLLCLCstop | 1 | 20210809 |
| EPI_ISL_4530142 | NSP3 | hCoV-19/England/PHEC-3G06FGEC/2021 | A | 1620 | stop | 3 | 20210919 |
| EPI_ISL_2374027 | NSP3 | hCoV-19/France/IDF-SLS762104045733/2021 | A | 1620 | P | 2 | 20210414 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1620 | G | 3 | 20220210 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | A | 1620 | H | 5 | 20230217 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | A | 1620 | E | 10 | 20240205 |
| EPI_ISL_18567624 | NSP3 | hCoV-19/Spain/EX-BA_18601649/2023 | A | 1620 | V | 36 | 20231115 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | A | 1620 | N | 1 | 20230213 |
| EPI_ISL_18887598 | NSP3 | hCoV-19/USA/CA-KP001048/2024 | A | 1620 | S | 36 | 20240206 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | A | 1620 | F | 3 | 20230217 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | A | 1620 | insstopWCstopKVLFMSML | 1 | 20210806 |
| EPI_ISL_12934291 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-122221-1511/2021 | A | 1620 | Y | 3 | 20211222 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | A | 1620 | L | 43 | 20230424 |
| EPI_ISL_17734375 | NSP3 | hCoV-19/USA/UT-UPHL-221219415675/2022 | A | 1620 | T | 4 | 20221206 |
| EPI_ISL_14749457 | NSP3 | hCoV-19/India/OR-ILSGS17681/2022 | A | 1620 | C | 65 | 20220704 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | A | 1620 | del | 69 | 20230424 |
| EPI_ISL_10823351 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81080/2022 | A | 1620 | I | 3 | 20220115 |
| EPI_ISL_17051894 | NSP3 | hCoV-19/USA/TX-UTEP-B002527722/2022 | A | 1620 | D | 3 | 20220712 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | A | 1620 | Q | 5 | 20220210 |
| EPI_ISL_2155360 | NSP3 | hCoV-19/Italy/SAR-Cagliari172/2021 | A | 1620 | R | 1 | 20210514 |
| EPI_ISL_2155360 | NSP3 | hCoV-19/Italy/SAR-Cagliari172/2021 | N | 1621 | Y | 2 | 20210514 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | N | 1621 | insKA | 1 | 20230217 |
| EPI_ISL_14676544 | NSP3 | hCoV-19/USA/NC-UNC-R221421/2022 | N | 1621 | H | 1 | 20220717 |
| EPI_ISL_17527163 | NSP3 | hCoV-19/Sweden/03_SE600_500000138375SP/2022 | N | 1621 | L | 6 | 20221229 |
| EPI_ISL_1178701 | NSP3 | hCoV-19/England/OXON-F670F9/2021 | N | 1621 | E | 1 | 20210119 |
| EPI_ISL_19642452 | NSP3 | hCoV-19/USA/CA-PFZ01675/2024 | N | 1621 | S | 108 | 20240910 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | N | 1621 | T | 10 | 20220210 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | N | 1621 | M | 43 | 20230408 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | N | 1621 | Q | 2 | 20210815 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1621 | C | 3 | 20220210 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | N | 1621 | del | 82 | 20230424 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | N | 1621 | K | 17 | 20230424 |
| EPI_ISL_18831613 | NSP3 | hCoV-19/France/CVL-ChuTo-287222/2023 | N | 1621 | D | 44 | 20231230 |
| EPI_ISL_16282440 | NSP3 | hCoV-19/Canary Islands/HUGCDN-03123179/2022 | N | 1621 | stop | 57 | 20221103 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | N | 1621 | V | 1 | 20211225 |
| EPI_ISL_18756288 | NSP3 | hCoV-19/France/CVL-ChuTo-9800122222/2023 | N | 1621 | A | 4 | 20231204 |
| EPI_ISL_17076775 | NSP3 | hCoV-19/England/PHEC-YYERU7N/2023 | N | 1621 | B | 5 | 20230217 |
| EPI_ISL_16919955 | NSP3 | hCoV-19/USA/TX-HMH-M-124581/2023 | G | 1622 | A | 5 | 20230127 |
| EPI_ISL_14749457 | NSP3 | hCoV-19/India/OR-ILSGS17681/2022 | G | 1622 | W | 21 | 20220704 |
| EPI_ISL_1178703 | NSP3 | hCoV-19/England/OXON-F67211/2021 | G | 1622 | N | 1 | 20210204 |
| EPI_ISL_11887715 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0677/2021 | G | 1622 | H | 1 | 20211227 |
| EPI_ISL_12934291 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-122221-1511/2021 | G | 1622 | I | 3 | 20211222 |
| EPI_ISL_17633468 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-47109/2023 | G | 1622 | R | 11 | 20230307 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | G | 1622 | del | 129 | 20240205 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1622 | F | 1 | 20210318 |
| EPI_ISL_18419204 | NSP3 | hCoV-19/USA/MO-WRAIR-MU8210NPS/2021 | G | 1622 | L | 1 | 20210119 |
| EPI_ISL_18816529 | NSP3 | hCoV-19/USA/TX-HMH-M-137614/2024 | G | 1622 | stop | 8 | 20240109 |
| EPI_ISL_17257344 | NSP3 | hCoV-19/England/BRBR-32702657/2023 | G | 1622 | V | 4 | 20230311 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | G | 1622 | D | 1 | 20211225 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | G | 1622 | Y | 11 | 20240315 |
| EPI_ISL_8035693 | NSP3 | hCoV-19/Pakistan/Nano B3 S-07/2021 | G | 1622 | insMLM | 1 | 20211211 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | G | 1622 | insCstopXVLLCLCstopW | 1 | 20210717 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1622 | T | 4 | 20220210 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | G | 1622 | K | 1 | 20230213 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | G | 1622 | E | 55 | 20230408 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | G | 1623 | del | 107 | 20240205 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | G | 1623 | insK | 1 | 20230401 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | G | 1623 | T | 17 | 20240315 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | G | 1623 | Q | 4 | 20230217 |
| EPI_ISL_12145078 | NSP3 | hCoV-19/Turkey/HSGM-3GS1388/2022 | G | 1623 | S | 8 | 20220312 |
| EPI_ISL_18098845 | NSP3 | hCoV-19/USA/TX-HMH-M-130927/2023 | G | 1623 | D | 2 | 20230803 |
| EPI_ISL_14749457 | NSP3 | hCoV-19/India/OR-ILSGS17681/2022 | G | 1623 | R | 8 | 20220704 |
| EPI_ISL_2643366 | NSP3 | hCoV-19/Estonia/Cov10180/2021 | G | 1623 | A | 1 | 20210311 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | G | 1623 | insstopKVLLYLCstopWRstop | 1 | 20210806 |
| EPI_ISL_8166906 | NSP3 | hCoV-19/USA/ID-IBL-776352/2021 | G | 1623 | L | 1 | 20211213 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | G | 1623 | N | 1 | 20201214 |
| EPI_ISL_18551914 | NSP3 | hCoV-19/Philippines/PGCV_0062_5586/2023 | G | 1623 | C | 23 | 20230517 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | G | 1623 | insstop | 12 | 20220127 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | G | 1623 | W | 1 | 20210806 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1623 | K | 2 | 20220210 |
| EPI_ISL_19560681 | NSP3 | hCoV-19/Brazil/SP-IAL-358001101/2024 | G | 1623 | V | 69 | 20241019 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | G | 1623 | stop | 6 | 20210927 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | K | 1624 | insK | 1 | 20210801 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1624 | C | 1 | 20220210 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | K | 1624 | L | 4 | 20220210 |
| EPI_ISL_1077253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-22725/2020 | K | 1624 | P | 2 | 20201230 |
| EPI_ISL_10397224 | NSP3 | hCoV-19/Turkey/HSGM-G1584/2022 | K | 1624 | S | 5 | 20220214 |
| EPI_ISL_18711490 | NSP3 | hCoV-19/South Korea/KDCA278839/2023 | K | 1624 | E | 214 | 20231204 |
| EPI_ISL_19824291 | NSP3 | hCoV-19/South Korea/KDCA297283/2025 | K | 1624 | R | 787 | 20250317 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | K | 1624 | del | 105 | 20240205 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | K | 1624 | A | 1 | 20230213 |
| EPI_ISL_19484965 | NSP3 | hCoV-19/Canary Islands/HUGCDN-04458077/2024 | K | 1624 | N | 221 | 20240821 |
| EPI_ISL_19357914 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YKFDN/2024 | K | 1624 | I | 38 | 20240719 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | K | 1624 | Y | 5 | 20230217 |
| EPI_ISL_14749457 | NSP3 | hCoV-19/India/OR-ILSGS17681/2022 | K | 1624 | stop | 8 | 20220704 |
| EPI_ISL_19757539 | NSP3 | hCoV-19/USA/VA-VCUVAS3-FHVR773713/2025 | K | 1624 | T | 30 | 20250214 |
| EPI_ISL_12320556 | NSP3 | hCoV-19/Turkey/HSGM-G8502/2022 | K | 1624 | Q | 11 | 20220410 |
| EPI_ISL_8166906 | NSP3 | hCoV-19/USA/ID-IBL-776352/2021 | K | 1624 | insTTQL | 1 | 20211213 |
| EPI_ISL_12741689 | NSP3 | hCoV-19/Israel/CVL-9004084/2022 | G | 1625 | D | 8 | 20220502 |
| EPI_ISL_19535720 | NSP3 | hCoV-19/Greece/PHLnetwork_5142/2024 | G | 1625 | S | 74 | 20240828 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | G | 1625 | E | 5 | 20220210 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | G | 1625 | L | 2 | 20210812 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | G | 1625 | insVL | 1 | 20211115 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | G | 1625 | insIV | 3 | 20211110 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | G | 1625 | M | 1 | 20210809 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | G | 1625 | V | 45 | 20230217 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | G | 1625 | del | 100 | 20240205 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | G | 1625 | stop | 7 | 20220324 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | G | 1625 | A | 65 | 20230408 |
| EPI_ISL_11887715 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0677/2021 | G | 1625 | N | 5 | 20211227 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | G | 1625 | K | 2 | 20211115 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | G | 1625 | T | 1 | 20230217 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | G | 1625 | F | 2 | 20210806 |
| EPI_ISL_19775284 | NSP3 | hCoV-19/Brazil/PA-IEC-25-004865/2025 | G | 1625 | C | 191 | 20250120 |
| EPI_ISL_15200038 | NSP3 | hCoV-19/Canada/MB-CPL-516691/2022 | G | 1625 | R | 9 | 20220913 |
| EPI_ISL_7547071 | NSP3 | hCoV-19/USA/OR-TRACE-MARI-100421-1035/2021 | F | 1626 | insV | 3 | 20211004 |
| EPI_ISL_19231717 | NSP3 | hCoV-19/Russia/TAM-RII-MH189026S/2024 | F | 1626 | L | 144 | 20240405 |
| EPI_ISL_12581352 | NSP3 | hCoV-19/Turkey/HSGM-GS2451/2022 | F | 1626 | V | 11 | 20220405 |
| EPI_ISL_19800035 | NSP3 | hCoV-19/USA/TX-HMH-M-147391/2025 | F | 1626 | S | 4 | 20250124 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1626 | E | 1 | 20210318 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | F | 1626 | I | 9 | 20240315 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | F | 1626 | M | 18 | 20230217 |
| EPI_ISL_11887715 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0677/2021 | F | 1626 | R | 1 | 20211227 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | F | 1626 | del | 49 | 20240205 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | F | 1626 | K | 5 | 20210526 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | F | 1626 | Y | 12 | 20230217 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | F | 1626 | W | 41 | 20220324 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | F | 1626 | stop | 1 | 20210801 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | F | 1626 | Q | 1 | 20210319 |
| EPI_ISL_12694318 | NSP3 | hCoV-19/Russia/RYA-CRIE-7725528555/2022 | F | 1626 | C | 3 | 20220128 |
| EPI_ISL_12145078 | NSP3 | hCoV-19/Turkey/HSGM-3GS1388/2022 | C | 1627 | R | 3 | 20220312 |
| EPI_ISL_14601896 | NSP3 | hCoV-19/India/OR-ILSGS18995/2022 | C | 1627 | Y | 9 | 20220803 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | C | 1627 | V | 11 | 20240315 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | C | 1627 | A | 44 | 20230408 |
| EPI_ISL_12934291 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-122221-1511/2021 | C | 1627 | I | 9 | 20211222 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | C | 1627 | T | 2 | 20210806 |
| EPI_ISL_1289413 | NSP3 | hCoV-19/Spain/CT-HUVH-43944/2021 | C | 1627 | H | 1 | 20210118 |
| EPI_ISL_7509775 | NSP3 | hCoV-19/USA/CA-CSMC669/2020 | C | 1627 | insstopCF | 1 | 20200910 |
| EPI_ISL_8804010 | NSP3 | hCoV-19/India/MH-NCCS-2750000365181/2021 | C | 1627 | insstopKVLLCLCstopWRstopRLF | 1 | 20210712 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | C | 1627 | L | 24 | 20220128 |
| EPI_ISL_17591897 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3194/2023 | C | 1627 | G | 4 | 20230413 |
| EPI_ISL_3421812 | NSP3 | hCoV-19/England/OXON-FA7FE1/2020 | C | 1627 | insstop | 1 | 20201229 |
| EPI_ISL_17592042 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3034/2023 | C | 1627 | F | 16 | 20230406 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1627 | N | 1 | 20220210 |
| EPI_ISL_16919423 | NSP3 | hCoV-19/USA/TX-HMH-M-124765/2023 | C | 1627 | stop | 5 | 20230202 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | C | 1627 | insYE | 5 | 20230217 |
| EPI_ISL_14770234 | NSP3 | hCoV-19/India/OR-ILSGS17456/2022 | C | 1627 | insstopKVLLCLCstopWRstopRLC | 3 | 20220324 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | C | 1627 | del | 48 | 20240205 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | C | 1627 | insstopKVLLCLCstopWRstopRLL | 36 | 20210419 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | C | 1627 | E | 5 | 20230217 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | C | 1627 | M | 2 | 20210809 |
| EPI_ISL_12320475 | NSP3 | hCoV-19/Turkey/HSGM-GS2075/2022 | C | 1627 | S | 10 | 20220401 |
| EPI_ISL_2438650 | NSP3 | hCoV-19/Kazakhstan/KUS-NRL-602S/2021 | C | 1627 | W | 3 | 20210426 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | K | 1628 | L | 6 | 20240315 |
| EPI_ISL_10858470 | NSP3 | hCoV-19/Turkey/HSGM-G2310/2022 | K | 1628 | S | 3 | 20220217 |
| EPI_ISL_12934291 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-122221-1511/2021 | K | 1628 | V | 9 | 20211222 |
| EPI_ISL_18639268 | NSP3 | hCoV-19/South Korea/KDCA276072/2023 | K | 1628 | N | 51 | 20231113 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | K | 1628 | C | 12 | 20220127 |
| EPI_ISL_8813043 | NSP3 | hCoV-19/USA/OR-TRACE-MULT-032721-1187/2021 | K | 1628 | Y | 2 | 20210327 |
| EPI_ISL_19213014 | NSP3 | hCoV-19/env/India/MH-NCL-245-05_2_A/2024 | K | 1628 | del | 71 | 20240205 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 1628 | M | 20 | 20230217 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | K | 1628 | A | 1 | 20210806 |
| EPI_ISL_19557021 | NSP3 | hCoV-19/Brazil/TO-FIOCRUZ-11799/2024 | K | 1628 | T | 25 | 20240921 |
| EPI_ISL_16539973 | NSP3 | hCoV-19/Italy/EMR-IZSLER-006918-005-01/2023 | K | 1628 | E | 19 | 20230110 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | K | 1628 | I | 3 | 20230424 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 1628 | W | 4 | 20230104 |
| EPI_ISL_19765312 | NSP3 | hCoV-19/USA/NY-PRL-250225_82C10/2025 | K | 1628 | R | 228 | 20250216 |
| EPI_ISL_10858405 | NSP3 | hCoV-19/Turkey/HSGM-G2172/2022 | K | 1628 | stop | 8 | 20220217 |
| EPI_ISL_16217355 | NSP3 | hCoV-19/Germany/SN-RKI-I-1065171/2022 | K | 1628 | Q | 41 | 20221207 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | L | 1629 | H | 1 | 20230217 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | L | 1629 | insstopTVVI | 13 | 20220704 |
| EPI_ISL_19784968 | NSP3 | hCoV-19/Brazil/RJ-FIOCRUZ-298/2025 | L | 1629 | I | 268 | 20250203 |
| EPI_ISL_3078871 | NSP3 | hCoV-19/England/OXON-FA14CA/2021 | L | 1629 | insstopTVVIHQLVstopCVTNVIE | 2 | 20210702 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | L | 1629 | T | 17 | 20220128 |
| EPI_ISL_17786776 | NSP3 | hCoV-19/England/PHEC-YYE4J5D/2023 | L | 1629 | J | 6 | 20230521 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 1629 | stop | 4 | 20230104 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | L | 1629 | insT | 1 | 20200729 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | L | 1629 | V | 14 | 20230424 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | L | 1629 | C | 1 | 20211115 |
| EPI_ISL_18558782 | NSP3 | hCoV-19/Argentina/PAIS-M0008/2023 | L | 1629 | Q | 69 | 20230907 |
| EPI_ISL_14954510 | NSP3 | hCoV-19/USA/TX-HMH-M-114683/2022 | L | 1629 | insVI | 2 | 20220904 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | L | 1629 | W | 1 | 20210801 |
| EPI_ISL_19139123 | NSP3 | hCoV-19/France/BRE-RELAB-IPP05368/2024 | L | 1629 | P | 152 | 20240404 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | L | 1629 | M | 3 | 20210526 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | L | 1629 | del | 70 | 20230424 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | L | 1629 | E | 1 | 20210115 |
| EPI_ISL_16249069 | NSP3 | hCoV-19/USA/WI-MHDL-110256/2022 | L | 1629 | R | 7 | 20221109 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | L | 1629 | F | 4 | 20230213 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | L | 1629 | Y | 5 | 20211229 |
| EPI_ISL_17592042 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3034/2023 | H | 1630 | Q | 10 | 20230406 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | H | 1630 | C | 13 | 20220127 |
| EPI_ISL_17275374 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45900/2023 | H | 1630 | L | 8 | 20230213 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | H | 1630 | M | 2 | 20210807 |
| EPI_ISL_17628636 | NSP3 | hCoV-19/Russia/MOW-CRIE-7794824576/2022 | H | 1630 | P | 6 | 20221203 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | H | 1630 | del | 67 | 20240315 |
| EPI_ISL_17704453 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0242-ZR/2023 | H | 1630 | N | 20 | 20230424 |
| EPI_ISL_13282063 | NSP3 | hCoV-19/USA/ID-IBL-656335/2020 | H | 1630 | E | 1 | 20200915 |
| EPI_ISL_18351626 | NSP3 | hCoV-19/USA/UT-UPHL-231003136491/2023 | H | 1630 | insXXX | 1 | 20230925 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | H | 1630 | Y | 35 | 20230104 |
| EPI_ISL_5854760 | NSP3 | hCoV-19/Nigeria/MRL-OS-2079/2021 | H | 1630 | D | 8 | 20210630 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | H | 1630 | T | 11 | 20220128 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | H | 1630 | K | 2 | 20211115 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | H | 1630 | stop | 6 | 20230217 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | H | 1630 | S | 3 | 20230217 |
| EPI_ISL_10397225 | NSP3 | hCoV-19/Turkey/HSGM-G1585/2022 | H | 1630 | R | 3 | 20220214 |
| EPI_ISL_18342937 | NSP3 | hCoV-19/Belgium/UMONS-L868117801/2023 | N | 1631 | Y | 29 | 20230907 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | N | 1631 | insVKAF | 1 | 20210807 |
| EPI_ISL_8813043 | NSP3 | hCoV-19/USA/OR-TRACE-MULT-032721-1187/2021 | N | 1631 | C | 2 | 20210327 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | N | 1631 | stop | 13 | 20220127 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | N | 1631 | L | 8 | 20230217 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | N | 1631 | del | 68 | 20240315 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | N | 1631 | E | 3 | 20210807 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | N | 1631 | V | 2 | 20210804 |
| EPI_ISL_19006669 | NSP3 | hCoV-19/England/CLIMB-CM7YMSIG/2024 | N | 1631 | K | 172 | 20240313 |
| EPI_ISL_13282063 | NSP3 | hCoV-19/USA/ID-IBL-656335/2020 | N | 1631 | R | 1 | 20200915 |
| EPI_ISL_18065936 | NSP3 | hCoV-19/Japan/PG-544397/2023 | N | 1631 | D | 8 | 20230519 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | N | 1631 | Q | 19 | 20220704 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | N | 1631 | T | 8 | 20230429 |
| EPI_ISL_10380267 | NSP3 | hCoV-19/England/DHSC-CYNDXZQ/2021 | N | 1631 | insstopI | 1 | 20211220 |
| EPI_ISL_16456821 | NSP3 | hCoV-19/England/BRBR-326852E0/2023 | N | 1631 | B | 6 | 20230102 |
| EPI_ISL_19651428 | NSP3 | hCoV-19/Brazil/SC-FIOCRUZ-12840/2024 | N | 1631 | S | 186 | 20241017 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | N | 1631 | I | 9 | 20230104 |
| EPI_ISL_18928959 | NSP3 | hCoV-19/USA/CT-DPH-1203126001/2024 | N | 1631 | H | 11 | 20240119 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | N | 1631 | A | 2 | 20211115 |
| EPI_ISL_1051606 | NSP3 | hCoV-19/England/OXON-F5E408/2021 | N | 1631 | insV | 3 | 20210123 |
| EPI_ISL_6599852 | NSP3 | hCoV-19/Thailand/19832/2021 | W | 1632 | R | 2 | 20211030 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | W | 1632 | V | 14 | 20230217 |
| EPI_ISL_15106342 | NSP3 | hCoV-19/USA/NY-PRL-220919_00L18/2022 | W | 1632 | C | 7 | 20220915 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | W | 1632 | del | 79 | 20240315 |
| EPI_ISL_19310108 | NSP3 | hCoV-19/env/Germany/BY-LGL-6297418/2024 | W | 1632 | stop | 14 | 20240717 |
| EPI_ISL_12934425 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012822-1645/2022 | W | 1632 | L | 20 | 20220128 |
| EPI_ISL_18164084 | NSP3 | hCoV-19/USA/TX-HMH-M-131958/2023 | W | 1632 | S | 15 | 20230818 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | W | 1632 | E | 8 | 20220105 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | W | 1632 | I | 7 | 20220210 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | W | 1632 | M | 1 | 20211115 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | W | 1632 | N | 1 | 20201214 |
| EPI_ISL_16762050 | NSP3 | hCoV-19/USA/TX-HMH-M-124133/2023 | W | 1632 | G | 4 | 20230124 |
| EPI_ISL_1387214 | NSP3 | hCoV-19/England/OXON-F6C337/2021 | W | 1632 | insS | 1 | 20210128 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | W | 1632 | F | 2 | 20230429 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | W | 1632 | insCstop | 1 | 20220203 |
| EPI_ISL_17592042 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3034/2023 | W | 1632 | T | 2 | 20230406 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | W | 1632 | Y | 13 | 20230104 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | N | 1633 | insstopRLLQTTQLEL | 3 | 20211215 |
| EPI_ISL_14954510 | NSP3 | hCoV-19/USA/TX-HMH-M-114683/2022 | N | 1633 | L | 24 | 20220904 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | N | 1633 | stop | 6 | 20230104 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | N | 1633 | C | 1 | 20230429 |
| EPI_ISL_12658867 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-112821-1308/2021 | N | 1633 | insL | 2 | 20211128 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | N | 1633 | R | 15 | 20220127 |
| EPI_ISL_11952350 | NSP3 | hCoV-19/England/DHSC-CYYGZBX/2022 | N | 1633 | Y | 3 | 20220213 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | N | 1633 | del | 79 | 20240315 |
| EPI_ISL_2903317 | NSP3 | hCoV-19/England/OXON-F89B2D/2020 | N | 1633 | V | 2 | 20201119 |
| EPI_ISL_14584798 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16850/2022 | N | 1633 | K | 12 | 20220727 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | N | 1633 | I | 2 | 20220222 |
| EPI_ISL_2903317 | NSP3 | hCoV-19/England/OXON-F89B2D/2020 | N | 1633 | insstop | 2 | 20201119 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | N | 1633 | T | 8 | 20220819 |
| EPI_ISL_15722855 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_BQZCQWBWYZDN5K44/2022 | N | 1633 | B | 3 | 20221019 |
| EPI_ISL_17592042 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3034/2023 | N | 1633 | Q | 4 | 20230406 |
| EPI_ISL_8882807 | NSP3 | hCoV-19/India/GA-NCCS-VH78098/2021 | N | 1633 | G | 3 | 20210626 |
| EPI_ISL_12784786 | NSP3 | hCoV-19/Greece/22195/2022 | N | 1633 | D | 142 | 20220410 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | N | 1633 | H | 2 | 20230217 |
| EPI_ISL_12658867 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-112821-1308/2021 | N | 1633 | E | 10 | 20211128 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1633 | S | 7 | 20220210 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | N | 1633 | A | 1 | 20210809 |
| EPI_ISL_14411297 | NSP3 | hCoV-19/Germany/NW-RKI-I-935340/2022 | C | 1634 | insVNCDTLCAGNGGKGFCKLHNWNC | 1 | 20220725 |
| EPI_ISL_17711379 | NSP3 | hCoV-19/Thailand/NIC_BKK_3118/2023 | C | 1634 | A | 2 | 20230429 |
| EPI_ISL_13197363 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_TRST66ZD2IZTNVEZ/2022 | C | 1634 | Y | 6 | 20220525 |
| EPI_ISL_6200451 | NSP3 | hCoV-19/Israel/SMC-7016581/2021 | C | 1634 | R | 6 | 20210910 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | C | 1634 | del | 68 | 20240315 |
| EPI_ISL_6262425 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012521-742/2021 | C | 1634 | W | 1 | 20210125 |
| EPI_ISL_12582703 | NSP3 | hCoV-19/Turkey/HSGM-GS2215/2022 | C | 1634 | stop | 14 | 20220410 |
| EPI_ISL_1051606 | NSP3 | hCoV-19/England/OXON-F5E408/2021 | C | 1634 | insY | 2 | 20210123 |
| EPI_ISL_10380267 | NSP3 | hCoV-19/England/DHSC-CYNDXZQ/2021 | C | 1634 | I | 4 | 20211220 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1634 | D | 1 | 20220210 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | C | 1634 | N | 1 | 20210809 |
| EPI_ISL_1002102 | NSP3 | hCoV-19/Switzerland/SO-ETHZ-451041/2021 | C | 1634 | G | 1 | 20210111 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | C | 1634 | V | 19 | 20230217 |
| EPI_ISL_17592042 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3034/2023 | C | 1634 | L | 17 | 20230406 |
| EPI_ISL_14927136 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00014105_01/2022 | C | 1634 | S | 9 | 20220801 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | C | 1634 | insstopLYL | 1 | 20210804 |
| EPI_ISL_477221 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0019/2020 | C | 1634 | M | 1 | 20200611 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | C | 1634 | T | 1 | 20210807 |
| EPI_ISL_19415149 | NSP3 | hCoV-19/env/Germany/BY-LGL-6330514/2024 | C | 1634 | F | 3 | 20240819 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | V | 1635 | M | 3 | 20230104 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | V | 1635 | S | 1 | 20210805 |
| EPI_ISL_10397225 | NSP3 | hCoV-19/Turkey/HSGM-G1585/2022 | V | 1635 | D | 37 | 20220214 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | V | 1635 | del | 72 | 20240315 |
| EPI_ISL_8813043 | NSP3 | hCoV-19/USA/OR-TRACE-MULT-032721-1187/2021 | V | 1635 | insYstopstopstop | 2 | 20210327 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | V | 1635 | insstopYIYstopstopstop | 2 | 20220210 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | V | 1635 | Y | 4 | 20220105 |
| EPI_ISL_2903317 | NSP3 | hCoV-19/England/OXON-F89B2D/2020 | V | 1635 | insT | 1 | 20201119 |
| EPI_ISL_18527702 | NSP3 | hCoV-19/Sweden/AB-01_SE100_23CS102398/2023 | V | 1635 | A | 49 | 20231110 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | V | 1635 | L | 11 | 20220222 |
| EPI_ISL_19342694 | NSP3 | hCoV-19/Japan/FR051-0064/2024 | V | 1635 | F | 211 | 20240501 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | V | 1635 | stop | 13 | 20211215 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | V | 1635 | K | 1 | 20211115 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | V | 1635 | R | 10 | 20220127 |
| EPI_ISL_17592042 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3034/2023 | V | 1635 | E | 4 | 20230406 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | V | 1635 | W | 3 | 20220210 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | V | 1635 | insHLLstopstop | 1 | 20210916 |
| EPI_ISL_19808421 | NSP3 | hCoV-19/Canada/ON-PHL-202504777/2025 | V | 1635 | I | 513 | 20250308 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | V | 1635 | insstopLstopHILCWstopYIDstopstopR | 1 | 20210805 |
| EPI_ISL_19393156 | NSP3 | hCoV-19/Spain/AS-HUCA-232465724/2024 | V | 1635 | G | 320 | 20240829 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | V | 1635 | C | 5 | 20210927 |
| EPI_ISL_9973577 | NSP3 | hCoV-19/France/BFC-HMN-22012250132/2022 | V | 1635 | T | 3 | 20220117 |
| EPI_ISL_14556664 | NSP3 | hCoV-19/Switzerland/ZH-UZH-IMV-3ba65c4f/2022 | N | 1636 | I | 31 | 20220803 |
| EPI_ISL_15267370 | NSP3 | hCoV-19/Denmark/DCGC-588809/2022 | N | 1636 | B | 7 | 20220930 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | N | 1636 | stop | 18 | 20220704 |
| EPI_ISL_18463601 | NSP3 | hCoV-19/USA/IL-C23WGS3173/2023 | N | 1636 | D | 93 | 20231023 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | N | 1636 | H | 17 | 20230217 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | N | 1636 | M | 2 | 20211225 |
| EPI_ISL_14681151 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-1402MANI001/2022 | N | 1636 | insCDTFCAGS | 3 | 20220210 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | N | 1636 | G | 5 | 20220819 |
| EPI_ISL_14378246 | NSP3 | hCoV-19/Germany/NW-RKI-I-916541/2022 | N | 1636 | insCDTFCAGSGGKGFCKLHNWNCVN | 1 | 20220711 |
| EPI_ISL_18902834 | NSP3 | hCoV-19/USA/CA-CDPH-500132165/2023 | N | 1636 | T | 38 | 20231228 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | N | 1636 | insWRYILCWstopYIYstopstopstopS | 1 | 20220112 |
| EPI_ISL_14440949 | NSP3 | hCoV-19/India/TN-ICMR-NIRT-INSACOG-W5/2022 | N | 1636 | F | 1 | 20220201 |
| EPI_ISL_19795891 | NSP3 | hCoV-19/Australia/WA16846/2025 | N | 1636 | S | 688 | 20250305 |
| EPI_ISL_17020817 | NSP3 | hCoV-19/Chile/LL-197660/2021 | N | 1636 | E | 1 | 20211224 |
| EPI_ISL_7509667 | NSP3 | hCoV-19/USA/CA-CSMC549/2020 | N | 1636 | R | 1 | 20201006 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | N | 1636 | A | 5 | 20211115 |
| EPI_ISL_11494180 | NSP3 | hCoV-19/France/CVL-HMN-22022240298/2022 | N | 1636 | V | 12 | 20220131 |
| EPI_ISL_17592042 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3034/2023 | N | 1636 | L | 24 | 20230406 |
| EPI_ISL_12753104 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726728650/2022 | N | 1636 | Y | 5 | 20220204 |
| EPI_ISL_19617097 | NSP3 | hCoV-19/USA/WI-WSLH-2401794/2024 | N | 1636 | K | 25 | 20240723 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | N | 1636 | del | 82 | 20240315 |
| EPI_ISL_14378205 | NSP3 | hCoV-19/Germany/NW-RKI-I-916499/2022 | N | 1636 | insCDTFCAGSNGGKGFCKLHNWNCVN | 1 | 20220711 |
| EPI_ISL_8812967 | NSP3 | hCoV-19/USA/OR-TRACE-POLK-042521-1190/2021 | N | 1636 | C | 1 | 20210425 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | N | 1636 | W | 3 | 20210526 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | C | 1637 | K | 2 | 20230413 |
| EPI_ISL_12146261 | NSP3 | hCoV-19/Turkey/HSGM-GS1777/2022 | C | 1637 | Y | 5 | 20220401 |
| EPI_ISL_14325569 | NSP3 | hCoV-19/Israel/SMC-7096392/2022 | C | 1637 | R | 9 | 20220726 |
| EPI_ISL_15306354 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-115946/2022 | C | 1637 | stop | 23 | 20220916 |
| EPI_ISL_10052963 | NSP3 | hCoV-19/England/NEWC-368D998/2022 | C | 1637 | W | 2 | 20220209 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | C | 1637 | I | 8 | 20220819 |
| EPI_ISL_16394746 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2434/2022 | C | 1637 | V | 6 | 20221219 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | C | 1637 | del | 109 | 20240315 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | C | 1637 | L | 10 | 20230217 |
| EPI_ISL_14392780 | NSP3 | hCoV-19/India/MH-NCCS-2748700655982/2021 | C | 1637 | insstopF | 1 | 20211110 |
| EPI_ISL_16441107 | NSP3 | hCoV-19/England/BRBR-3266A13F/2022 | C | 1637 | F | 17 | 20221228 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1637 | A | 2 | 20220210 |
| EPI_ISL_840203 | NSP3 | hCoV-19/England/OXON-F3EF1C/2020 | C | 1637 | insVIE | 1 | 20201103 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | C | 1637 | S | 15 | 20230424 |
| EPI_ISL_840203 | NSP3 | hCoV-19/England/OXON-F3EF1C/2020 | C | 1637 | N | 1 | 20201103 |
| EPI_ISL_13500978 | NSP3 | hCoV-19/Denmark/DCGC-537069/2022 | C | 1637 | insRSGVR | 1 | 20220620 |
| EPI_ISL_10380267 | NSP3 | hCoV-19/England/DHSC-CYNDXZQ/2021 | C | 1637 | H | 1 | 20211220 |
| EPI_ISL_3052905 | NSP3 | hCoV-19/Italy/CAM-INTPas_C43/2021 | C | 1637 | insstopKVLLCLF | 1 | 20210416 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | C | 1637 | Q | 2 | 20230217 |
| EPI_ISL_17978374 | NSP3 | hCoV-19/Jiangsu/CZCDC-138/2023 | C | 1637 | G | 10 | 20230525 |
| EPI_ISL_19822831 | NSP3 | hCoV-19/Denmark/DCGC-692101/2025 | D | 1638 | A | 117 | 20250310 |
| EPI_ISL_16394746 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2434/2022 | D | 1638 | T | 3 | 20221219 |
| EPI_ISL_5525014 | NSP3 | hCoV-19/England/MILK-27E55E7/2021 | D | 1638 | B | 2 | 20211019 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | D | 1638 | K | 1 | 20200721 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | D | 1638 | P | 1 | 20210809 |
| EPI_ISL_14009188 | NSP3 | hCoV-19/USA/MO-CDC-LC0773590/2022 | D | 1638 | S | 2 | 20220705 |
| EPI_ISL_18217159 | NSP3 | hCoV-19/Henan/XXCDC-070302/2023 | D | 1638 | Y | 48 | 20230627 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | D | 1638 | del | 78 | 20240315 |
| EPI_ISL_14378226 | NSP3 | hCoV-19/Germany/NW-RKI-I-916520/2022 | D | 1638 | insTFCAGSTFNGGKGFCKLHNWNCVNCD | 2 | 20220711 |
| EPI_ISL_3775922 | NSP3 | hCoV-19/England/PHEC-T308T955/2021 | D | 1638 | I | 5 | 20210820 |
| EPI_ISL_18382303 | NSP3 | hCoV-19/South Korea/KDCA267386/2023 | D | 1638 | E | 816 | 20230918 |
| EPI_ISL_17007281 | NSP3 | hCoV-19/England/BRBR-326D65AB/2023 | D | 1638 | N | 220 | 20230216 |
| EPI_ISL_15300331 | NSP3 | hCoV-19/France/PAC-LBZCentre-0520815120/2022 | D | 1638 | H | 20 | 20220816 |
| EPI_ISL_8803756 | NSP3 | hCoV-19/India/MH-NCCS-56268/2021 | D | 1638 | Q | 2 | 20210809 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | D | 1638 | M | 1 | 20201214 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | D | 1638 | V | 30 | 20230424 |
| EPI_ISL_18317415 | NSP3 | hCoV-19/USA/CA-CDPH-500122175/2023 | D | 1638 | G | 28 | 20230810 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | D | 1638 | L | 3 | 20230217 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | D | 1638 | stop | 5 | 20210804 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 1639 | H | 1 | 20210801 |
| EPI_ISL_1051606 | NSP3 | hCoV-19/England/OXON-F5E408/2021 | T | 1639 | D | 2 | 20210123 |
| EPI_ISL_8803759 | NSP3 | hCoV-19/India/GA-NCCS-3055200157344/2021 | T | 1639 | insTQLELCstopLstopYI | 1 | 20210803 |
| EPI_ISL_16575556 | NSP3 | hCoV-19/Japan/22612/2021 | T | 1639 | insNVIEQQESNVQLLLMVLEGPFMSMLMEVKAFAN | 1 | 20210421 |
| EPI_ISL_19808690 | NSP3 | hCoV-19/Canada/ON-SHL-202501053/2025 | T | 1639 | I | 483 | 20250305 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | T | 1639 | Q | 2 | 20230413 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | T | 1639 | del | 60 | 20240315 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | T | 1639 | E | 2 | 20220112 |
| EPI_ISL_8803756 | NSP3 | hCoV-19/India/MH-NCCS-56268/2021 | T | 1639 | insTQLE | 1 | 20210809 |
| EPI_ISL_18578588 | NSP3 | hCoV-19/Poland/WWSSE3050/2023 | T | 1639 | S | 8 | 20231201 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | T | 1639 | V | 5 | 20230217 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | T | 1639 | N | 33 | 20230408 |
| EPI_ISL_17028513 | NSP3 | hCoV-19/Chile/AR-ISPC-96883/2021 | T | 1639 | insXXXXXX | 1 | 20210516 |
| EPI_ISL_3775922 | NSP3 | hCoV-19/England/PHEC-T308T955/2021 | T | 1639 | Y | 1 | 20210820 |
| EPI_ISL_17275294 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45819/2023 | T | 1639 | A | 266 | 20230217 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | T | 1639 | R | 13 | 20220210 |
| EPI_ISL_18853833 | NSP3 | hCoV-19/Australia/NSW-ICPMR-52639/2024 | T | 1639 | K | 28 | 20240104 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | T | 1639 | L | 6 | 20220819 |
| EPI_ISL_3178955 | NSP3 | hCoV-19/Wales/OXON-FA6D06/2020 | T | 1639 | insVLLC | 1 | 20201120 |
| EPI_ISL_8543766 | NSP3 | hCoV-19/France/IDF-HMN-22012020228/2022 | T | 1639 | P | 1 | 20220102 |
| EPI_ISL_19729035 | NSP3 | hCoV-19/Japan/FR016-0011/2025 | F | 1640 | Y | 96 | 20250124 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1640 | D | 1 | 20201214 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1640 | K | 1 | 20210318 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | F | 1640 | P | 1 | 20200807 |
| EPI_ISL_16780696 | NSP3 | hCoV-19/USA/VA-CDC-QDX45689451/2023 | F | 1640 | C | 22 | 20230115 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | F | 1640 | N | 10 | 20220704 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | F | 1640 | T | 3 | 20220112 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | F | 1640 | M | 1 | 20211110 |
| EPI_ISL_11322664 | NSP3 | hCoV-19/Israel/SMC-7046160/2022 | F | 1640 | S | 30 | 20220215 |
| EPI_ISL_1051606 | NSP3 | hCoV-19/England/OXON-F5E408/2021 | F | 1640 | G | 2 | 20210123 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | F | 1640 | V | 39 | 20230424 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | F | 1640 | del | 54 | 20240315 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | F | 1640 | I | 18 | 20220819 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | F | 1640 | insIYstopstopstopS | 1 | 20210804 |
| EPI_ISL_18830380 | NSP3 | hCoV-19/Spain/CL-COV45956/2024 | F | 1640 | L | 45 | 20240105 |
| EPI_ISL_18936218 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00069/2023 | F | 1640 | stop | 4 | 20230413 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | C | 1641 | stop | 3 | 20220110 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | C | 1641 | T | 39 | 20230408 |
| EPI_ISL_19448856 | NSP3 | hCoV-19/USA/NE-NPHL24-469/2024 | C | 1641 | S | 81 | 20240912 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | C | 1641 | E | 1 | 20230217 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | C | 1641 | insA | 1 | 20210809 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1641 | D | 1 | 20210318 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | C | 1641 | V | 18 | 20220819 |
| EPI_ISL_19661578 | NSP3 | hCoV-19/New Zealand/24YA7770/2024 | C | 1641 | W | 20 | 20241206 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | C | 1641 | G | 4 | 20210807 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | C | 1641 | L | 5 | 20221118 |
| EPI_ISL_19817936 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U841-1/2025 | C | 1641 | F | 255 | 20250314 |
| EPI_ISL_19762799 | NSP3 | hCoV-19/South Africa/NICD-N58819/2024 | C | 1641 | R | 35 | 20241121 |
| EPI_ISL_8803756 | NSP3 | hCoV-19/India/MH-NCCS-56268/2021 | C | 1641 | insstopLstopYIL | 1 | 20210809 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | C | 1641 | I | 1 | 20200721 |
| EPI_ISL_19741779 | NSP3 | hCoV-19/Hubei/HCDC-JZ7603/2025 | C | 1641 | Y | 511 | 20250107 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | C | 1641 | H | 1 | 20230217 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | C | 1641 | del | 51 | 20240315 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | C | 1641 | K | 3 | 20230424 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1642 | Y | 1 | 20220210 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | A | 1642 | C | 3 | 20221118 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | A | 1642 | N | 4 | 20230424 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | A | 1642 | W | 10 | 20211215 |
| EPI_ISL_19744216 | NSP3 | hCoV-19/Wales/CLIMB-CM7YRDQD/2025 | A | 1642 | T | 177 | 20250203 |
| EPI_ISL_10848934 | NSP3 | hCoV-19/England/DHSC-CYBN7WJ/2022 | A | 1642 | P | 1 | 20220217 |
| EPI_ISL_19827117 | NSP3 | hCoV-19/Chile/NB-ISPC-26371/2025 | A | 1642 | V | 2794 | 20250322 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | A | 1642 | del | 58 | 20240315 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | A | 1642 | L | 3 | 20211110 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | A | 1642 | stop | 3 | 20220203 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | A | 1642 | H | 3 | 20220112 |
| EPI_ISL_19337783 | NSP3 | hCoV-19/Japan/FR062-0378/2024 | A | 1642 | S | 377 | 20240725 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | A | 1642 | R | 1 | 20210804 |
| EPI_ISL_8985355 | NSP3 | hCoV-19/Poland/Kce-362/2022 | A | 1642 | G | 64 | 20220117 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | A | 1642 | I | 55 | 20230408 |
| EPI_ISL_17503462 | NSP3 | hCoV-19/Slovakia/BB_23_00000082/2023 | A | 1642 | D | 5 | 20230222 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | G | 1643 | T | 2 | 20230217 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | G | 1643 | W | 1 | 20220203 |
| EPI_ISL_12582707 | NSP3 | hCoV-19/Turkey/HSGM-GS2142/2022 | G | 1643 | A | 53 | 20220410 |
| EPI_ISL_19175915 | NSP3 | hCoV-19/USA/NJ-CDC-LC1104657/2024 | G | 1643 | V | 84 | 20240510 |
| EPI_ISL_19499165 | NSP3 | hCoV-19/USA/TX-HMH-M-146304/2024 | G | 1643 | D | 121 | 20240916 |
| EPI_ISL_19039027 | NSP3 | hCoV-19/USA/HI-H2328381/2024 | G | 1643 | R | 10 | 20240222 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1643 | Q | 1 | 20210318 |
| EPI_ISL_19311653 | NSP3 | hCoV-19/Singapore/R43MQ43/2024 | G | 1643 | C | 71 | 20240709 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | G | 1643 | Y | 1 | 20220112 |
| EPI_ISL_3003645 | NSP3 | hCoV-19/England/OXON-F8CC54/2021 | G | 1643 | insVL | 1 | 20210701 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | G | 1643 | K | 1 | 20231121 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | G | 1643 | del | 64 | 20240315 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | G | 1643 | E | 11 | 20220704 |
| EPI_ISL_19710077 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56186/2025 | G | 1643 | S | 374 | 20250121 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | G | 1643 | N | 5 | 20230217 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | G | 1643 | H | 5 | 20220819 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | G | 1643 | stop | 11 | 20220110 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | S | 1644 | L | 4 | 20211220 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1644 | M | 1 | 20220210 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | S | 1644 | H | 3 | 20211220 |
| EPI_ISL_19644294 | NSP3 | hCoV-19/Brazil/SP-IAL-358035715/2024 | S | 1644 | T | 10 | 20241119 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | S | 1644 | V | 2 | 20210801 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | S | 1644 | F | 2 | 20220811 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | S | 1644 | I | 49 | 20230408 |
| EPI_ISL_18382925 | NSP3 | hCoV-19/South Korea/KDCA266814/2023 | S | 1644 | C | 16 | 20230919 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | S | 1644 | N | 29 | 20230217 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | S | 1644 | D | 1 | 20230217 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | S | 1644 | Y | 9 | 20211215 |
| EPI_ISL_19773303 | NSP3 | hCoV-19/USA/NJ-CDC-LC1134069/2025 | S | 1644 | G | 292 | 20250228 |
| EPI_ISL_3079049 | NSP3 | hCoV-19/England/OXON-FA2AA9/2021 | S | 1644 | insQESNVQLL | 2 | 20210702 |
| EPI_ISL_19053926 | NSP3 | hCoV-19/env/Germany/BY-LGL-6182620/2024 | S | 1644 | del | 69 | 20240320 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | S | 1644 | E | 1 | 20211110 |
| EPI_ISL_7509667 | NSP3 | hCoV-19/USA/CA-CSMC549/2020 | S | 1644 | stop | 1 | 20201006 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | S | 1644 | A | 1 | 20210928 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | S | 1644 | Q | 10 | 20231121 |
| EPI_ISL_1178701 | NSP3 | hCoV-19/England/OXON-F670F9/2021 | S | 1644 | J | 1 | 20210119 |
| EPI_ISL_13648104 | NSP3 | hCoV-19/Spain/AS-252237734/2022 | S | 1644 | R | 11 | 20220623 |
| EPI_ISL_16258488 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2003/2022 | S | 1644 | K | 4 | 20220815 |
| EPI_ISL_3079049 | NSP3 | hCoV-19/England/OXON-FA2AA9/2021 | T | 1645 | L | 4 | 20210702 |
| EPI_ISL_10858422 | NSP3 | hCoV-19/Turkey/HSGM-G2221/2022 | T | 1645 | A | 2 | 20220217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1645 | E | 1 | 20201214 |
| EPI_ISL_12308684 | NSP3 | hCoV-19/Russia/KOS-CRIE-7726346418/2022 | T | 1645 | R | 3 | 20220202 |
| EPI_ISL_8049913 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7119/2021 | T | 1645 | D | 2 | 20211126 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | T | 1645 | V | 55 | 20240315 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 1645 | H | 1 | 20210801 |
| EPI_ISL_2445044 | NSP3 | hCoV-19/USA/AZ-ASPHL-4023/2021 | T | 1645 | S | 11 | 20210521 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | T | 1645 | insESNVQLLL | 7 | 20220704 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | T | 1645 | Q | 7 | 20220704 |
| EPI_ISL_2678745 | NSP3 | hCoV-19/Germany/HE-RKI-I-181647/2021 | T | 1645 | G | 1 | 20210617 |
| EPI_ISL_12291381 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1115/2022 | T | 1645 | N | 1 | 20220118 |
| EPI_ISL_12291378 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1111/2022 | T | 1645 | M | 2 | 20220124 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | T | 1645 | del | 63 | 20240115 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | T | 1645 | K | 11 | 20230217 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | T | 1645 | Y | 1 | 20200701 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | T | 1645 | stop | 2 | 20220203 |
| EPI_ISL_17686000 | NSP3 | hCoV-19/USA/TX-HMH-128846/2023 | T | 1645 | I | 31 | 20230509 |
| EPI_ISL_19812680 | NSP3 | hCoV-19/Malaysia/UNIMAS-HSIBUML739/2024 | F | 1646 | S | 5 | 20241025 |
| EPI_ISL_479746 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0075/2020 | F | 1646 | insISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRCVstopETGAGSTF | 1 | 20200617 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | F | 1646 | V | 5 | 20211031 |
| EPI_ISL_12291393 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1127/2022 | F | 1646 | A | 1 | 20220119 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | F | 1646 | M | 10 | 20220704 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | F | 1646 | D | 1 | 20210525 |
| EPI_ISL_18936158 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00103/2023 | F | 1646 | L | 67 | 20230415 |
| EPI_ISL_12291379 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1113/2022 | F | 1646 | Q | 2 | 20220123 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1646 | E | 2 | 20220210 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | F | 1646 | del | 63 | 20240115 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | F | 1646 | R | 1 | 20220203 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | F | 1646 | I | 12 | 20240315 |
| EPI_ISL_17322932 | NSP3 | hCoV-19/monkey/USA/AZ-TG1196516/2022 | F | 1646 | C | 7 | 20220619 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | F | 1646 | K | 1 | 20231121 |
| EPI_ISL_12582707 | NSP3 | hCoV-19/Turkey/HSGM-GS2142/2022 | F | 1646 | Y | 101 | 20220410 |
| EPI_ISL_3568588 | NSP3 | hCoV-19/France/ARA-CHUGA-1063979941/2021 | I | 1647 | insKstopstop | 1 | 20210620 |
| EPI_ISL_12291393 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1127/2022 | I | 1647 | G | 1 | 20220119 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | I | 1647 | E | 4 | 20230217 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | I | 1647 | L | 26 | 20230217 |
| EPI_ISL_18984677 | NSP3 | hCoV-19/USA/UT-UPHL-240207562821/2023 | I | 1647 | V | 45 | 20231229 |
| EPI_ISL_17592058 | NSP3 | hCoV-19/India/MH-CSIR-NEERI3039/2023 | I | 1647 | insVIH | 36 | 20230408 |
| EPI_ISL_12372953 | NSP3 | hCoV-19/Finland/R-999/2022 | I | 1647 | M | 4 | 20220119 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | I | 1647 | del | 66 | 20240115 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | I | 1647 | stop | 8 | 20211215 |
| EPI_ISL_9656613 | NSP3 | hCoV-19/Israel/SMC-7041785/2022 | I | 1647 | T | 3 | 20220128 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | I | 1647 | Y | 4 | 20211110 |
| EPI_ISL_12583904 | NSP3 | hCoV-19/Turkey/HSGM-GS2787/2022 | I | 1647 | N | 3 | 20220407 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1647 | R | 1 | 20220210 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | I | 1647 | H | 7 | 20240315 |
| EPI_ISL_13571093 | NSP3 | hCoV-19/env/France/NAQ-LIM-UNI-PUCE-35-47/2022 | I | 1647 | S | 6 | 20220315 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | I | 1647 | F | 2 | 20231121 |
| EPI_ISL_2404761 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050921-705/2021 | S | 1648 | M | 2 | 20210509 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | S | 1648 | Y | 2 | 20211220 |
| EPI_ISL_14954510 | NSP3 | hCoV-19/USA/TX-HMH-M-114683/2022 | S | 1648 | V | 18 | 20220904 |
| EPI_ISL_14317893 | NSP3 | hCoV-19/Denmark/DCGC-559179/2022 | S | 1648 | N | 21 | 20220730 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | S | 1648 | stop | 9 | 20211215 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | S | 1648 | H | 1 | 20210807 |
| EPI_ISL_14953063 | NSP3 | hCoV-19/USA/NC-UNC-R221521/2022 | S | 1648 | T | 6 | 20220725 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | S | 1648 | K | 6 | 20220112 |
| EPI_ISL_5374734 | NSP3 | hCoV-19/USA/TN-CDC-ASC210086715/2021 | S | 1648 | R | 3 | 20210921 |
| EPI_ISL_10606812 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-76784/2022 | S | 1648 | I | 4 | 20220107 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | S | 1648 | L | 11 | 20220704 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | S | 1648 | Q | 3 | 20230217 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | S | 1648 | del | 65 | 20240115 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | S | 1648 | E | 1 | 20231121 |
| EPI_ISL_19821860 | NSP3 | hCoV-19/USA/VA-CDC-LC1136359/2025 | S | 1648 | G | 170 | 20250326 |
| EPI_ISL_10944789 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-94978/2022 | S | 1648 | C | 15 | 20220301 |
| EPI_ISL_3421731 | NSP3 | hCoV-19/England/OXON-FA753A/2020 | D | 1649 | L | 1 | 20201208 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | D | 1649 | T | 2 | 20231121 |
| EPI_ISL_19012977 | NSP3 | hCoV-19/Puerto Rico/S-6402/2024 | D | 1649 | G | 19 | 20240109 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | D | 1649 | del | 65 | 20240115 |
| EPI_ISL_19128446 | NSP3 | hCoV-19/Denmark/DCGC-683106/2022 | D | 1649 | A | 3 | 20221219 |
| EPI_ISL_17372406 | NSP3 | hCoV-19/India/TN-SPHL-2832/2023 | D | 1649 | N | 7 | 20230309 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | D | 1649 | V | 44 | 20240315 |
| EPI_ISL_12829093 | NSP3 | hCoV-19/Spain/AS-252210281/2022 | D | 1649 | I | 3 | 20220511 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | D | 1649 | H | 6 | 20220819 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | D | 1649 | Q | 4 | 20230217 |
| EPI_ISL_3568588 | NSP3 | hCoV-19/France/ARA-CHUGA-1063979941/2021 | D | 1649 | C | 1 | 20210620 |
| EPI_ISL_17350660 | NSP3 | hCoV-19/England/BRBR-3270EB3E/2023 | D | 1649 | Y | 6 | 20230320 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | D | 1649 | K | 2 | 20201214 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | D | 1649 | S | 8 | 20210807 |
| EPI_ISL_19666574 | NSP3 | hCoV-19/Italy/LOM-UNIBS-17317804/2024 | D | 1649 | E | 38 | 20241226 |
| EPI_ISL_14954510 | NSP3 | hCoV-19/USA/TX-HMH-M-114683/2022 | D | 1649 | M | 11 | 20220904 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | D | 1649 | stop | 10 | 20211215 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | E | 1650 | insSF | 1 | 20200729 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | E | 1650 | K | 20 | 20230104 |
| EPI_ISL_16575556 | NSP3 | hCoV-19/Japan/22612/2021 | E | 1650 | insSVLV | 1 | 20210421 |
| EPI_ISL_16375968 | NSP3 | hCoV-19/Brazil/MT-LACENMT-510494466/2022 | E | 1650 | C | 1 | 20221111 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | E | 1650 | R | 2 | 20211210 |
| EPI_ISL_2885747 | NSP3 | hCoV-19/Italy/SAR-Cagliari338/2021 | E | 1650 | I | 1 | 20210701 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | E | 1650 | del | 60 | 20240115 |
| EPI_ISL_18736813 | NSP3 | hCoV-19/Russia/SPE-MH155730S/2023 | E | 1650 | stop | 9 | 20231121 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 1650 | P | 1 | 20210318 |
| EPI_ISL_14959009 | NSP3 | hCoV-19/USA/NC-CLT-003355/2021 | E | 1650 | A | 1 | 20211115 |
| EPI_ISL_19511239 | NSP3 | hCoV-19/Netherlands/ZH-EMC-8860/2024 | E | 1650 | D | 134 | 20240813 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | E | 1650 | S | 9 | 20211215 |
| EPI_ISL_16709319 | NSP3 | hCoV-19/England/BRBR-326A6F4C/2023 | E | 1650 | Z | 23 | 20230120 |
| EPI_ISL_1167125 | NSP3 | hCoV-19/Senegal/SN-MBO-201859/2021 | E | 1650 | insV | 1 | 20210127 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | E | 1650 | G | 20 | 20220704 |
| EPI_ISL_14392801 | NSP3 | hCoV-19/India/GA-NCCS-3055200197155/2021 | E | 1650 | N | 1 | 20211023 |
| EPI_ISL_11930093 | NSP3 | hCoV-19/England/DHSC-CYBJFB4/2022 | E | 1650 | Q | 9 | 20220221 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | E | 1650 | T | 4 | 20230217 |
| EPI_ISL_2923283 | NSP3 | hCoV-19/Kuwait/KCCC-92-3488496/2021 | E | 1650 | V | 2 | 20210701 |
| EPI_ISL_16575556 | NSP3 | hCoV-19/Japan/22612/2021 | E | 1650 | H | 2 | 20210421 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | E | 1650 | L | 52 | 20240315 |
| EPI_ISL_17275321 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45846/2023 | V | 1651 | Q | 2 | 20230217 |
| EPI_ISL_4399142 | NSP3 | hCoV-19/USA/FL-CDC-ASC210121586/2021 | V | 1651 | G | 1 | 20210820 |
| EPI_ISL_19757013 | NSP3 | hCoV-19/Sweden/BD-M10020383/2025 | V | 1651 | I | 106 | 20250202 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | V | 1651 | T | 2 | 20220203 |
| EPI_ISL_17372419 | NSP3 | hCoV-19/India/TN-SPHL-2853/2023 | V | 1651 | D | 6 | 20230306 |
| EPI_ISL_19463787 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS501867/2024 | V | 1651 | A | 38 | 20240927 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 1651 | S | 5 | 20230217 |
| EPI_ISL_17372406 | NSP3 | hCoV-19/India/TN-SPHL-2832/2023 | V | 1651 | L | 32 | 20230309 |
| EPI_ISL_3568588 | NSP3 | hCoV-19/France/ARA-CHUGA-1063979941/2021 | V | 1651 | K | 2 | 20210620 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | V | 1651 | del | 59 | 20240115 |
| EPI_ISL_12582717 | NSP3 | hCoV-19/Turkey/HSGM-G8459/2022 | V | 1651 | F | 5 | 20220401 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | V | 1651 | C | 10 | 20211215 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | V | 1651 | P | 9 | 20220704 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | V | 1651 | M | 1 | 20210115 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | V | 1651 | Y | 1 | 20200729 |
| EPI_ISL_3421731 | NSP3 | hCoV-19/England/OXON-FA753A/2020 | V | 1651 | E | 1 | 20201208 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | V | 1651 | stop | 4 | 20220112 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1652 | E | 16 | 20220210 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | A | 1652 | I | 5 | 20220112 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | A | 1652 | L | 5 | 20230217 |
| EPI_ISL_19553617 | NSP3 | hCoV-19/USA/GA-UM-G88A58Z4/2024 | A | 1652 | S | 104 | 20240917 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | A | 1652 | insstopstopI | 1 | 20210118 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | A | 1652 | R | 12 | 20230104 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | A | 1652 | C | 3 | 20210806 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | A | 1652 | Q | 1 | 20220203 |
| EPI_ISL_16407569 | NSP3 | hCoV-19/England/BRBR-32646B59/2022 | A | 1652 | T | 5 | 20221221 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | A | 1652 | F | 10 | 20220704 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | A | 1652 | P | 2 | 20230116 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | A | 1652 | insstopYIYstop | 1 | 20210807 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | A | 1652 | W | 1 | 20210807 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | A | 1652 | insMKL | 2 | 20220819 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | A | 1652 | V | 72 | 20240315 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | A | 1652 | del | 53 | 20240115 |
| EPI_ISL_16258498 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1984/2022 | A | 1652 | K | 2 | 20220730 |
| EPI_ISL_19212892 | NSP3 | hCoV-19/env/India/MH-NCL-236-17/2024 | A | 1652 | G | 14 | 20240117 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | A | 1652 | N | 3 | 20230217 |
| EPI_ISL_10820285 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-79482/2022 | A | 1652 | M | 1 | 20220112 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | R | 1653 | Q | 1 | 20210115 |
| EPI_ISL_3568588 | NSP3 | hCoV-19/France/ARA-CHUGA-1063979941/2021 | R | 1653 | C | 2 | 20210620 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | R | 1653 | V | 2 | 20230217 |
| EPI_ISL_19637899 | NSP3 | hCoV-19/Russia/TYU-RII-MH217385S/2024 | R | 1653 | stop | 6 | 20241129 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | R | 1653 | H | 46 | 20240315 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | R | 1653 | N | 1 | 20201214 |
| EPI_ISL_19286134 | NSP3 | hCoV-19/Chile/VS-41277/2024 | R | 1653 | I | 57 | 20240523 |
| EPI_ISL_19364675 | NSP3 | hCoV-19/Canada/AB-ABPHL-121821/2024 | R | 1653 | T | 18 | 20240815 |
| EPI_ISL_1475544 | NSP3 | hCoV-19/England/OXON-F77FEA/2021 | R | 1653 | insC | 1 | 20210215 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | R | 1653 | L | 7 | 20220203 |
| EPI_ISL_19499228 | NSP3 | hCoV-19/USA/TX-HMH-M-146653/2024 | R | 1653 | G | 150 | 20241002 |
| EPI_ISL_16258498 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1984/2022 | R | 1653 | D | 1 | 20220730 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | R | 1653 | M | 11 | 20220704 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | R | 1653 | A | 1 | 20230217 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | R | 1653 | del | 48 | 20240115 |
| EPI_ISL_19212916 | NSP3 | hCoV-19/env/India/MH-NCL-258-11/2024 | R | 1653 | E | 23 | 20240411 |
| EPI_ISL_19726184 | NSP3 | hCoV-19/France/PAC-RELAB-HCL725000023001/2025 | R | 1653 | S | 75 | 20250123 |
| EPI_ISL_19036117 | NSP3 | hCoV-19/Spain/CL-46619/2024 | R | 1653 | K | 38 | 20240301 |
| EPI_ISL_11767469 | NSP3 | hCoV-19/India/KA-SLS-6329/2021 | R | 1653 | J | 1 | 20210906 |
| EPI_ISL_7509807 | NSP3 | hCoV-19/USA/CA-CSMC703/2020 | D | 1654 | insR | 1 | 20200915 |
| EPI_ISL_19192556 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15989/2024 | D | 1654 | del | 50 | 20240305 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | D | 1654 | H | 4 | 20210805 |
| EPI_ISL_18840307 | NSP3 | hCoV-19/env/Ukraine/81183/2023 | D | 1654 | G | 1 | 20231005 |
| EPI_ISL_18459931 | NSP3 | hCoV-19/New Zealand/23ZA4770/2023 | D | 1654 | Y | 16 | 20230922 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | D | 1654 | P | 1 | 20210115 |
| EPI_ISL_14994552 | NSP3 | hCoV-19/Denmark/DCGC-579416/2022 | D | 1654 | B | 1 | 20220911 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | D | 1654 | insT | 1 | 20210802 |
| EPI_ISL_19212916 | NSP3 | hCoV-19/env/India/MH-NCL-258-11/2024 | D | 1654 | T | 22 | 20240411 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | D | 1654 | stop | 2 | 20210807 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | D | 1654 | S | 10 | 20220704 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | D | 1654 | A | 1 | 20201214 |
| EPI_ISL_16258498 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1984/2022 | D | 1654 | I | 1 | 20220730 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1654 | V | 1 | 20220210 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | D | 1654 | Q | 8 | 20230217 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | D | 1654 | C | 1 | 20200606 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | D | 1654 | L | 60 | 20240315 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | D | 1654 | K | 3 | 20230116 |
| EPI_ISL_11736389 | NSP3 | hCoV-19/India/KA-SLS-SEQ-4368/2021 | D | 1654 | F | 1 | 20210904 |
| EPI_ISL_19620010 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004208213/2024 | D | 1654 | E | 99 | 20241014 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | D | 1654 | R | 2 | 20210806 |
| EPI_ISL_1840693 | NSP3 | hCoV-19/USA/TX-BSWTemple-GA73091/2021 | D | 1654 | N | 1 | 20210417 |
| EPI_ISL_12319508 | NSP3 | hCoV-19/Turkey/HSGM-3GS1302/2022 | L | 1655 | stop | 2 | 20220312 |
| EPI_ISL_8468675 | NSP3 | hCoV-19/USA/NJ-CDC-LC0442923/2021 | L | 1655 | V | 17 | 20211216 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | L | 1655 | Y | 7 | 20220209 |
| EPI_ISL_16243683 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_4HROTEWTF2ITDDCP/2022 | L | 1655 | S | 5 | 20221207 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | L | 1655 | T | 8 | 20220819 |
| EPI_ISL_17038669 | NSP3 | hCoV-19/USA/TN-CDC-VSX-A061784/2023 | L | 1655 | F | 21 | 20230208 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | L | 1655 | I | 5 | 20230424 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | L | 1655 | del | 34 | 20240115 |
| EPI_ISL_8193604 | NSP3 | hCoV-19/Egypt/NRC-6109/2020 | L | 1655 | insRETCHY | 1 | 20200628 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | L | 1655 | A | 2 | 20210118 |
| EPI_ISL_19212916 | NSP3 | hCoV-19/env/India/MH-NCL-258-11/2024 | L | 1655 | C | 23 | 20240411 |
| EPI_ISL_8812990 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-111221-1251/2021 | L | 1655 | insLETC | 1 | 20211112 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | L | 1655 | N | 1 | 20220225 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | L | 1655 | M | 10 | 20230217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1655 | P | 1 | 20201214 |
| EPI_ISL_14506839 | NSP3 | hCoV-19/Japan/RIMD12138/2022 | L | 1655 | W | 3 | 20220712 |
| EPI_ISL_2445044 | NSP3 | hCoV-19/USA/AZ-ASPHL-4023/2021 | S | 1656 | G | 6 | 20210521 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | S | 1656 | E | 1 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1656 | K | 4 | 20220210 |
| EPI_ISL_19212916 | NSP3 | hCoV-19/env/India/MH-NCL-258-11/2024 | S | 1656 | H | 26 | 20240411 |
| EPI_ISL_19562245 | NSP3 | hCoV-19/Canada/ON-PHL-202421823/2024 | S | 1656 | A | 585 | 20241113 |
| EPI_ISL_12753121 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726729139/2022 | S | 1656 | P | 8 | 20220204 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | S | 1656 | V | 53 | 20240315 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | S | 1656 | del | 30 | 20240115 |
| EPI_ISL_14753968 | NSP3 | hCoV-19/USA/TX-HMH-M-113158/2022 | S | 1656 | C | 4 | 20220819 |
| EPI_ISL_10837371 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-92551/2021 | S | 1656 | T | 12 | 20211231 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 1656 | F | 1 | 20210318 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | S | 1656 | insstopLstopYIL | 1 | 20220203 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | S | 1656 | L | 17 | 20230217 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | S | 1656 | Q | 2 | 20230116 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 1656 | stop | 2 | 20230217 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | L | 1657 | M | 55 | 20240315 |
| EPI_ISL_14614978 | NSP3 | hCoV-19/Brazil/ES-LACENES-321185600/2022 | L | 1657 | P | 8 | 20220313 |
| EPI_ISL_17782163 | NSP3 | hCoV-19/Austria/AGES-1138463/2023 | L | 1657 | H | 2 | 20230522 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | L | 1657 | del | 27 | 20231225 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | L | 1657 | E | 1 | 20210807 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1657 | N | 1 | 20220210 |
| EPI_ISL_17227240 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_YGMB4TLBXXJTCPQB/2023 | L | 1657 | J | 8 | 20230309 |
| EPI_ISL_19200605 | NSP3 | hCoV-19/Hubei/HCDC-WH5549/2024 | L | 1657 | Q | 19 | 20240610 |
| EPI_ISL_15953810 | NSP3 | hCoV-19/Japan/PG-391818/2022 | L | 1657 | V | 8 | 20221024 |
| EPI_ISL_19192556 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15989/2024 | L | 1657 | T | 16 | 20240305 |
| EPI_ISL_19553028 | NSP3 | hCoV-19/Canada/QC-L00809551001/2024 | L | 1657 | I | 132 | 20241104 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | L | 1657 | S | 2 | 20211220 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | L | 1657 | K | 1 | 20200729 |
| EPI_ISL_19212916 | NSP3 | hCoV-19/env/India/MH-NCL-258-11/2024 | L | 1657 | Y | 24 | 20240411 |
| EPI_ISL_14866133 | NSP3 | hCoV-19/USA/TX-TAMGHRC-SJH-573320/2022 | Q | 1658 | Z | 45 | 20220710 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | Q | 1658 | del | 32 | 20231225 |
| EPI_ISL_18975545 | NSP3 | hCoV-19/USA/UT-UPHL-240207855214/2024 | Q | 1658 | R | 18 | 20240113 |
| EPI_ISL_11529798 | NSP3 | hCoV-19/USA/NC-ECU-112258835/2022 | Q | 1658 | A | 2 | 20220221 |
| EPI_ISL_17021250 | NSP3 | hCoV-19/Chile/AR-199379/2021 | Q | 1658 | insQL | 1 | 20211228 |
| EPI_ISL_5324095 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00348941_CAM_IZSM_COLLI_TIGEM/2021 | Q | 1658 | J | 3 | 20210920 |
| EPI_ISL_10033242 | NSP3 | hCoV-19/France/CVL-HMN-22012270506/2022 | Q | 1658 | G | 1 | 20220103 |
| EPI_ISL_17635077 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200416145N2/2022 | Q | 1658 | insXX | 8 | 20220609 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | Q | 1658 | P | 1 | 20230217 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | Q | 1658 | L | 15 | 20230217 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | Q | 1658 | insstop | 1 | 20210428 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | Q | 1658 | Y | 2 | 20230424 |
| EPI_ISL_6469696 | NSP3 | hCoV-19/Sweden/UUH-000200223740/2021 | Q | 1658 | insXXXXX | 1 | 20211028 |
| EPI_ISL_19749672 | NSP3 | hCoV-19/USA/NY-CDC-QDX31410827/2025 | Q | 1658 | H | 1507 | 20250204 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Q | 1658 | M | 2 | 20230217 |
| EPI_ISL_12658867 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-112821-1308/2021 | Q | 1658 | V | 9 | 20211128 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | Q | 1658 | I | 1 | 20201214 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | Q | 1658 | W | 1 | 20210801 |
| EPI_ISL_19212916 | NSP3 | hCoV-19/env/India/MH-NCL-258-11/2024 | Q | 1658 | S | 28 | 20240411 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | Q | 1658 | E | 17 | 20220704 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Q | 1658 | insV | 2 | 20230217 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | Q | 1658 | K | 95 | 20240315 |
| EPI_ISL_19192556 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15989/2024 | Q | 1658 | T | 9 | 20240305 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1658 | C | 3 | 20220210 |
| EPI_ISL_19806971 | NSP3 | hCoV-19/Spain/CL-UCHV-49805/2024 | Q | 1658 | stop | 22 | 20241204 |
| EPI_ISL_17624934 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200350112N2/2022 | Q | 1658 | insXXX | 1 | 20220203 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | F | 1659 | T | 3 | 20220112 |
| EPI_ISL_6166582 | NSP3 | hCoV-19/USA/FL-CDC-ASC210360332/2021 | F | 1659 | I | 3 | 20211011 |
| EPI_ISL_2389453 | NSP3 | hCoV-19/Germany/HE-RKI-I-166127/2021 | F | 1659 | P | 4 | 20210525 |
| EPI_ISL_6599854 | NSP3 | hCoV-19/Thailand/004/2021 | F | 1659 | J | 1 | 20211022 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | F | 1659 | D | 2 | 20211110 |
| EPI_ISL_3421721 | NSP3 | hCoV-19/England/OXON-FA73E5/2020 | F | 1659 | G | 2 | 20201122 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | F | 1659 | del | 37 | 20231225 |
| EPI_ISL_19192556 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15989/2024 | F | 1659 | V | 50 | 20240305 |
| EPI_ISL_17021250 | NSP3 | hCoV-19/Chile/AR-199379/2021 | F | 1659 | M | 2 | 20211228 |
| EPI_ISL_10191659 | NSP3 | hCoV-19/USA/TN-ASC-210590246/2022 | F | 1659 | stop | 9 | 20220112 |
| EPI_ISL_7454720 | NSP3 | hCoV-19/Sweden/UUH-300000109945N2/2021 | F | 1659 | insXX | 1 | 20211125 |
| EPI_ISL_17211191 | NSP3 | hCoV-19/env/France/NAQ-CHUL-57-45/2023 | F | 1659 | Y | 89 | 20230214 |
| EPI_ISL_14666645 | NSP3 | hCoV-19/Belgium/rega-39105/2022 | F | 1659 | C | 14 | 20220308 |
| EPI_ISL_19650856 | NSP3 | hCoV-19/Sweden/C-000200811397N2/2024 | F | 1659 | S | 128 | 20241209 |
| EPI_ISL_19762894 | NSP3 | hCoV-19/Egypt/CPHL-EGY24442/2024 | F | 1659 | L | 152 | 20241219 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | F | 1659 | H | 3 | 20211220 |
| EPI_ISL_8803764 | NSP3 | hCoV-19/India/GA-NCCS-3055200157331/2021 | K | 1660 | insETCHYSstop | 1 | 20210803 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1660 | A | 1 | 20220210 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | K | 1660 | del | 44 | 20231225 |
| EPI_ISL_4348473 | NSP3 | hCoV-19/Thailand/ChaiNat_SEQ16157/2021 | K | 1660 | T | 2 | 20210907 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | K | 1660 | I | 4 | 20211220 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | K | 1660 | D | 4 | 20230424 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | K | 1660 | Q | 7 | 20230217 |
| EPI_ISL_17711378 | NSP3 | hCoV-19/Thailand/NIC_SKA_3096/2023 | K | 1660 | P | 3 | 20230502 |
| EPI_ISL_19365718 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-144697/2024 | K | 1660 | stop | 30 | 20240807 |
| EPI_ISL_17021250 | NSP3 | hCoV-19/Chile/AR-199379/2021 | K | 1660 | C | 2 | 20211228 |
| EPI_ISL_19823426 | NSP3 | hCoV-19/Japan/FR021-0260/2025 | K | 1660 | R | 347 | 20250306 |
| EPI_ISL_10818614 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-77494/2022 | K | 1660 | L | 5 | 20220107 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 1660 | E | 6 | 20230217 |
| EPI_ISL_7468187 | NSP3 | hCoV-19/India/AP-CCMB-CIB4941/2021 | K | 1660 | N | 8 | 20211010 |
| EPI_ISL_8166906 | NSP3 | hCoV-19/USA/ID-IBL-776352/2021 | K | 1660 | V | 3 | 20211213 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | K | 1660 | S | 5 | 20220112 |
| EPI_ISL_2499782 | NSP3 | hCoV-19/Iraq/001/2021 | K | 1660 | H | 1 | 20210301 |
| EPI_ISL_6466287 | NSP3 | hCoV-19/Germany/NW-RKI-I-323772/2021 | K | 1660 | insRPINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 1 | 20211103 |
| EPI_ISL_16950667 | NSP3 | hCoV-19/Japan/PG-445851/2023 | R | 1661 | I | 17 | 20230127 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | R | 1661 | stop | 3 | 20211220 |
| EPI_ISL_17021250 | NSP3 | hCoV-19/Chile/AR-199379/2021 | R | 1661 | Q | 3 | 20211228 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | R | 1661 | G | 13 | 20230217 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | R | 1661 | del | 63 | 20231225 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | R | 1661 | V | 1 | 20210525 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 1661 | L | 5 | 20220210 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | R | 1661 | E | 81 | 20240315 |
| EPI_ISL_9526798 | NSP3 | hCoV-19/USA/LA-CDC-ASC210591087/2022 | R | 1661 | T | 7 | 20220113 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | R | 1661 | K | 35 | 20230424 |
| EPI_ISL_17711378 | NSP3 | hCoV-19/Thailand/NIC_SKA_3096/2023 | R | 1661 | S | 8 | 20230502 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | R | 1661 | A | 9 | 20220704 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | P | 1662 | T | 311 | 20240315 |
| EPI_ISL_14180616 | NSP3 | hCoV-19/USA/TX-HMH-M-108426/2022 | P | 1662 | E | 1 | 20220720 |
| EPI_ISL_16486284 | NSP3 | hCoV-19/Ireland/D-NVRL-S22IRL00483707/2022 | P | 1662 | Q | 13 | 20221224 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1662 | I | 3 | 20220210 |
| EPI_ISL_18899091 | NSP3 | hCoV-19/Uruguay/DLSP_HC5/2023 | P | 1662 | L | 82 | 20231114 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | P | 1662 | V | 1 | 20201214 |
| EPI_ISL_19792823 | NSP3 | hCoV-19/USA/NY-PRL-250318_83F10/2025 | P | 1662 | S | 1361 | 20250310 |
| EPI_ISL_17021232 | NSP3 | hCoV-19/Chile/RM-199220/2021 | P | 1662 | C | 1 | 20211227 |
| EPI_ISL_2903010 | NSP3 | hCoV-19/England/OXON-F877C1/2020 | P | 1662 | N | 1 | 20201123 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | P | 1662 | stop | 3 | 20210428 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | P | 1662 | F | 8 | 20220704 |
| EPI_ISL_5437284 | NSP3 | hCoV-19/Sweden/UUH-000100021390/2021 | P | 1662 | insXXXXX | 1 | 20210506 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1662 | K | 1 | 20210318 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | P | 1662 | A | 5 | 20230116 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | P | 1662 | D | 2 | 20210806 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | P | 1662 | insQstop | 1 | 20210806 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | P | 1662 | del | 76 | 20231225 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | I | 1663 | F | 2 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1663 | P | 1 | 20210318 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | I | 1663 | L | 9 | 20230116 |
| EPI_ISL_811216 | NSP3 | hCoV-19/England/QEUH-E4AD7E/2021 | I | 1663 | J | 1 | 20210104 |
| EPI_ISL_19743381 | NSP3 | hCoV-19/Canada/NS-NSH-766947/2025 | I | 1663 | V | 273 | 20250121 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | I | 1663 | del | 71 | 20231225 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | I | 1663 | S | 1 | 20210801 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | I | 1663 | A | 8 | 20220704 |
| EPI_ISL_12934371 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1591/2022 | I | 1663 | N | 2 | 20220119 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | I | 1663 | C | 80 | 20240315 |
| EPI_ISL_12145109 | NSP3 | hCoV-19/Turkey/HSGM-G8356/2022 | I | 1663 | T | 4 | 20220312 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | I | 1663 | M | 2 | 20211220 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | I | 1663 | Y | 3 | 20210804 |
| EPI_ISL_17711378 | NSP3 | hCoV-19/Thailand/NIC_SKA_3096/2023 | I | 1663 | R | 3 | 20230502 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | N | 1664 | insSYstop | 1 | 20210812 |
| EPI_ISL_2903010 | NSP3 | hCoV-19/England/OXON-F877C1/2020 | N | 1664 | G | 1 | 20201123 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | N | 1664 | del | 70 | 20231225 |
| EPI_ISL_14662598 | NSP3 | hCoV-19/South Korea/KDCA103272/2022 | N | 1664 | K | 10 | 20220807 |
| EPI_ISL_19027455 | NSP3 | hCoV-19/Canada/BC-BCCDC-706042/2024 | N | 1664 | D | 41 | 20240312 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | N | 1664 | E | 2 | 20201214 |
| EPI_ISL_19549487 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55512/2024 | N | 1664 | S | 172 | 20241031 |
| EPI_ISL_8166906 | NSP3 | hCoV-19/USA/ID-IBL-776352/2021 | N | 1664 | stop | 5 | 20211213 |
| EPI_ISL_18474041 | NSP3 | hCoV-19/Germany/BY-LGL-6045849/2023 | N | 1664 | B | 1 | 20231019 |
| EPI_ISL_12753068 | NSP3 | hCoV-19/Russia/LIP-CRIE-7726731176/2022 | N | 1664 | Y | 6 | 20220204 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | N | 1664 | V | 2 | 20210525 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | N | 1664 | insstopN | 1 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1664 | A | 1 | 20220210 |
| EPI_ISL_19346370 | NSP3 | hCoV-19/USA/CO-CDPHE-42137514/2024 | N | 1664 | H | 91 | 20240802 |
| EPI_ISL_1051608 | NSP3 | hCoV-19/England/OXON-F5E787/2021 | N | 1664 | P | 1 | 20210124 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | N | 1664 | L | 4 | 20211110 |
| EPI_ISL_18807107 | NSP3 | hCoV-19/Japan/PG-586460/2023 | N | 1664 | I | 38 | 20231120 |
| EPI_ISL_19001167 | NSP3 | hCoV-19/Japan/PG-587402/2023 | N | 1664 | T | 285 | 20231216 |
| EPI_ISL_19470707 | NSP3 | hCoV-19/Canada/ON-PHL-202415767/2024 | P | 1665 | H | 160 | 20240927 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1665 | C | 37 | 20220210 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | P | 1665 | D | 1 | 20210115 |
| EPI_ISL_16597844 | NSP3 | hCoV-19/Germany/NW-RKI-I-1090012/2023 | P | 1665 | A | 3 | 20230102 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | P | 1665 | V | 5 | 20211220 |
| EPI_ISL_18338821 | NSP3 | hCoV-19/Brazil/SP-IAL-357304861/2023 | P | 1665 | N | 2 | 20230912 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | P | 1665 | K | 5 | 20220118 |
| EPI_ISL_19826284 | NSP3 | hCoV-19/Canada/ON-HSC-202501553-v1/2025 | P | 1665 | S | 5380 | 20250321 |
| EPI_ISL_18107891 | NSP3 | hCoV-19/USA/CA-LACPHL-AY01031/2023 | P | 1665 | F | 3 | 20230802 |
| EPI_ISL_19683063 | NSP3 | hCoV-19/USA/AZ-CDC-QDX29101846/2025 | P | 1665 | L | 965 | 20250107 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | P | 1665 | T | 9 | 20211110 |
| EPI_ISL_17020828 | NSP3 | hCoV-19/Chile/RM-197652/2021 | P | 1665 | G | 3 | 20211224 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | P | 1665 | stop | 2 | 20211015 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | P | 1665 | M | 1 | 20210428 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1665 | E | 1 | 20210318 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | P | 1665 | Y | 51 | 20240315 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | P | 1665 | del | 71 | 20231225 |
| EPI_ISL_15616042 | NSP3 | hCoV-19/Israel/CVL-9007889/2022 | T | 1666 | A | 4 | 20221022 |
| EPI_ISL_17020828 | NSP3 | hCoV-19/Chile/RM-197652/2021 | T | 1666 | V | 9 | 20211224 |
| EPI_ISL_16133197 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-41277/2022 | T | 1666 | P | 5 | 20221003 |
| EPI_ISL_12934371 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1591/2022 | T | 1666 | Y | 2 | 20220119 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | T | 1666 | C | 1 | 20211229 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | T | 1666 | stop | 2 | 20211015 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | T | 1666 | K | 1 | 20210815 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | T | 1666 | insLK | 41 | 20240315 |
| EPI_ISL_19035189 | NSP3 | hCoV-19/France/GES-RELAB-IPP04668/2024 | T | 1666 | I | 735 | 20240313 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | T | 1666 | L | 1 | 20211015 |
| EPI_ISL_1178703 | NSP3 | hCoV-19/England/OXON-F67211/2021 | T | 1666 | insVF | 2 | 20210204 |
| EPI_ISL_19192594 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-G-16002/2024 | T | 1666 | S | 141 | 20240315 |
| EPI_ISL_6309599 | NSP3 | hCoV-19/France/IDF-HMN-21112100324/2021 | T | 1666 | N | 3 | 20211028 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | T | 1666 | del | 65 | 20231225 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1666 | F | 3 | 20220210 |
| EPI_ISL_12934371 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1591/2022 | D | 1667 | stop | 3 | 20220119 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | D | 1667 | G | 2 | 20210115 |
| EPI_ISL_9392974 | NSP3 | hCoV-19/USA/NY-PRL-2022_0113_11C07/2022 | D | 1667 | B | 2 | 20220108 |
| EPI_ISL_16016433 | NSP3 | hCoV-19/Australia/QLD0x01285C/2022 | D | 1667 | Y | 8 | 20221122 |
| EPI_ISL_18363799 | NSP3 | hCoV-19/Canada/ON-KHS-06557-v1/2023 | D | 1667 | E | 28 | 20230927 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | D | 1667 | H | 1 | 20211015 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | D | 1667 | I | 10 | 20220704 |
| EPI_ISL_17020828 | NSP3 | hCoV-19/Chile/RM-197652/2021 | D | 1667 | R | 3 | 20211224 |
| EPI_ISL_11348119 | NSP3 | hCoV-19/Belarus/HM-CRIE-7735755932/2022 | D | 1667 | A | 1 | 20220110 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | D | 1667 | T | 1 | 20210428 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | D | 1667 | K | 1 | 20201214 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | D | 1667 | L | 4 | 20211110 |
| EPI_ISL_16555814 | NSP3 | hCoV-19/Austria/AGES-1124457/2022 | D | 1667 | V | 3 | 20220916 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | D | 1667 | del | 49 | 20231225 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | D | 1667 | F | 3 | 20210804 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | D | 1667 | S | 5 | 20211229 |
| EPI_ISL_17711378 | NSP3 | hCoV-19/Thailand/NIC_SKA_3096/2023 | D | 1667 | N | 26 | 20230502 |
| EPI_ISL_18902575 | NSP3 | hCoV-19/USA/CA-CDPH-500131888/2023 | Q | 1668 | L | 41 | 20231228 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | Q | 1668 | V | 1 | 20201214 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | Q | 1668 | insstopILL | 41 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1668 | A | 1 | 20220210 |
| EPI_ISL_14686738 | NSP3 | hCoV-19/Israel/SMC-7100661/2022 | Q | 1668 | stop | 10 | 20220816 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | Q | 1668 | N | 3 | 20211225 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | Q | 1668 | del | 42 | 20231225 |
| EPI_ISL_17988435 | NSP3 | hCoV-19/Spain/GA-SCQ-178063/2023 | Q | 1668 | K | 65 | 20230507 |
| EPI_ISL_8812963 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1241/2021 | Q | 1668 | insstopILLT | 2 | 20211104 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | Q | 1668 | F | 1 | 20210812 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | Q | 1668 | G | 10 | 20220704 |
| EPI_ISL_18690422 | NSP3 | hCoV-19/USA/TX-HMH-M-135683/2023 | Q | 1668 | P | 422 | 20231116 |
| EPI_ISL_11522616 | NSP3 | hCoV-19/Gabon/CC0093/2021 | Q | 1668 | insFL | 1 | 20210421 |
| EPI_ISL_14779701 | NSP3 | hCoV-19/USA/TX-PHH-22V-179G0476/2022 | Q | 1668 | R | 27 | 20220628 |
| EPI_ISL_18636097 | NSP3 | hCoV-19/USA/CA-GBW-H10-017-1550/2023 | Q | 1668 | H | 174 | 20231208 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | Q | 1668 | D | 2 | 20210115 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | Q | 1668 | S | 2 | 20210428 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | Q | 1668 | insILL | 1 | 20210807 |
| EPI_ISL_6152686 | NSP3 | hCoV-19/India/MH-RFIP01878/2021 | Q | 1668 | Z | 2 | 20210529 |
| EPI_ISL_3759988 | NSP3 | hCoV-19/USA/ID-IBL-747478/2021 | Q | 1668 | insstopTLL | 1 | 20210809 |
| EPI_ISL_16555814 | NSP3 | hCoV-19/Austria/AGES-1124457/2022 | Q | 1668 | E | 5 | 20220916 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | Q | 1668 | insstopIL | 2 | 20220205 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | Q | 1668 | T | 2 | 20210916 |
| EPI_ISL_8166906 | NSP3 | hCoV-19/USA/ID-IBL-776352/2021 | S | 1669 | insYstopP | 1 | 20211213 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | S | 1669 | del | 36 | 20231225 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 1669 | Q | 1 | 20210318 |
| EPI_ISL_19808110 | NSP3 | hCoV-19/Canada/ON-PHL-202504235/2025 | S | 1669 | A | 51 | 20250218 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | S | 1669 | N | 2 | 20210812 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | S | 1669 | D | 1 | 20210428 |
| EPI_ISL_19767037 | NSP3 | hCoV-19/Canada/SK-RRPL-768703/2025 | S | 1669 | P | 28 | 20250207 |
| EPI_ISL_7870698 | NSP3 | hCoV-19/India/MH-RFIP05052/2021 | S | 1669 | Y | 2 | 20211016 |
| EPI_ISL_17241091 | NSP3 | hCoV-19/USA/CA-CDC-VSX-A064536/2023 | S | 1669 | C | 14 | 20230307 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | S | 1669 | insCN | 1 | 20200606 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | S | 1669 | R | 3 | 20211225 |
| EPI_ISL_1178703 | NSP3 | hCoV-19/England/OXON-F67211/2021 | S | 1669 | K | 2 | 20210204 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | S | 1669 | stop | 5 | 20220302 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | S | 1669 | I | 8 | 20220704 |
| EPI_ISL_12934371 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011922-1591/2022 | S | 1669 | V | 2 | 20220119 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | S | 1669 | L | 5 | 20220205 |
| EPI_ISL_10835578 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-92227/2022 | S | 1669 | F | 10 | 20220218 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | S | 1669 | T | 51 | 20230401 |
| EPI_ISL_12658803 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-111521-1267/2021 | S | 1669 | insYstopPV | 1 | 20211115 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | S | 1669 | M | 3 | 20230217 |
| EPI_ISL_8803741 | NSP3 | hCoV-19/India/GA-NCCS-C55625/2021 | S | 1670 | insTSLIVLQstop | 1 | 20210629 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | S | 1670 | del | 36 | 20231225 |
| EPI_ISL_19504548 | NSP3 | hCoV-19/Liaoning/LNCDC-352-5/2024 | S | 1670 | C | 27 | 20240925 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | S | 1670 | stop | 2 | 20211015 |
| EPI_ISL_19501087 | NSP3 | hCoV-19/deer/USA/OH-OSU-0068628/2023 | S | 1670 | A | 52 | 20231204 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | S | 1670 | insL | 1 | 20210806 |
| EPI_ISL_19739843 | NSP3 | hCoV-19/Brazil/SP-LEIAL-4249/2025 | S | 1670 | P | 11 | 20250113 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | S | 1670 | Y | 79 | 20241024 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | S | 1670 | Q | 1 | 20210806 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | S | 1670 | V | 13 | 20220704 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | S | 1670 | L | 5 | 20210916 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1670 | E | 4 | 20220210 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | S | 1670 | N | 2 | 20210812 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | S | 1670 | I | 4 | 20220302 |
| EPI_ISL_18220261 | NSP3 | hCoV-19/France/IDF-IPP17148/2023 | S | 1670 | T | 24 | 20230814 |
| EPI_ISL_19826054 | NSP3 | hCoV-19/Singapore/Y25R15MSC59/2025 | S | 1670 | F | 10126 | 20250407 |
| EPI_ISL_19236967 | NSP3 | hCoV-19/Spain/AR-IACS_LaSARD-40600617/2023 | Y | 1671 | C | 105 | 20231201 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | Y | 1671 | I | 4 | 20220205 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | Y | 1671 | E | 1 | 20201214 |
| EPI_ISL_8803741 | NSP3 | hCoV-19/India/GA-NCCS-C55625/2021 | Y | 1671 | R | 2 | 20210629 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | Y | 1671 | insstopPVFLH | 1 | 20210815 |
| EPI_ISL_3797054 | NSP3 | hCoV-19/Thailand/Songkhla_SEQ14647/2021 | Y | 1671 | K | 4 | 20210816 |
| EPI_ISL_10825916 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81358/2022 | Y | 1671 | insRstopstop | 1 | 20220116 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | Y | 1671 | del | 40 | 20241024 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | Y | 1671 | T | 3 | 20211225 |
| EPI_ISL_19800833 | NSP3 | hCoV-19/Japan/FR062-0111/2025 | Y | 1671 | H | 807 | 20250312 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | Y | 1671 | L | 60 | 20230401 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 1671 | M | 3 | 20230217 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | Y | 1671 | Q | 1 | 20211220 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1671 | V | 1 | 20210318 |
| EPI_ISL_1039255 | NSP3 | hCoV-19/Belgium/UZA-UA-CV0615356478/2021 | Y | 1671 | D | 1 | 20210113 |
| EPI_ISL_11985210 | NSP3 | hCoV-19/French Guiana/GUF-ERFB-2069304544/2021 | Y | 1671 | N | 1 | 20210825 |
| EPI_ISL_3079256 | NSP3 | hCoV-19/England/OXON-FA3DEB/2021 | Y | 1671 | W | 1 | 20210708 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | Y | 1671 | S | 1 | 20210806 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | Y | 1671 | F | 11 | 20230217 |
| EPI_ISL_12934346 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011722-1566/2022 | Y | 1671 | stop | 12 | 20220117 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1671 | G | 1 | 20220210 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | Y | 1671 | P | 1 | 20210806 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1672 | A | 2 | 20220210 |
| EPI_ISL_19450827 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YFOX9/2024 | I | 1672 | M | 19 | 20240911 |
| EPI_ISL_12934346 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011722-1566/2022 | I | 1672 | P | 9 | 20220117 |
| EPI_ISL_19515165 | NSP3 | hCoV-19/Canada/ON-PHL-202418381/2024 | I | 1672 | F | 19 | 20241016 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | I | 1672 | insH | 1 | 20210801 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | I | 1672 | del | 36 | 20241024 |
| EPI_ISL_19804035 | NSP3 | hCoV-19/USA/WI-WSLH-2500537/2025 | I | 1672 | T | 638 | 20250128 |
| EPI_ISL_18914618 | NSP3 | hCoV-19/USA/NY-SUNYQB-X8405/2024 | I | 1672 | N | 41 | 20240118 |
| EPI_ISL_19455432 | NSP3 | hCoV-19/USA/NJ-CDC-LC1122304/2024 | I | 1672 | S | 429 | 20240919 |
| EPI_ISL_19801894 | NSP3 | hCoV-19/USA/MA-MASPHL-13583/2025 | I | 1672 | V | 525 | 20250121 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | I | 1672 | R | 4 | 20211225 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1672 | Q | 1 | 20210318 |
| EPI_ISL_10825916 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81358/2022 | I | 1672 | C | 3 | 20220116 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | I | 1672 | L | 83 | 20231225 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | I | 1672 | W | 1 | 20210428 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 1673 | M | 3 | 20230217 |
| EPI_ISL_3078995 | NSP3 | hCoV-19/England/OXON-FA249C/2020 | V | 1673 | C | 1 | 20200930 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | V | 1673 | S | 3 | 20230217 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | V | 1673 | del | 34 | 20241024 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | V | 1673 | L | 12 | 20220225 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | V | 1673 | insI | 7 | 20220704 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1673 | K | 1 | 20210318 |
| EPI_ISL_19802441 | NSP3 | hCoV-19/USA/CO-CDPHE-43205443/2025 | V | 1673 | I | 2446 | 20250227 |
| EPI_ISL_2965911 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-GSEQ-4211/2021 | V | 1673 | N | 1 | 20210608 |
| EPI_ISL_17466166 | NSP3 | hCoV-19/India/CT-AIIMSR-VRDL-INSACOG-1165/2023 | V | 1673 | F | 322 | 20230404 |
| EPI_ISL_19631162 | NSP3 | hCoV-19/Netherlands/NH-RIVM-144525/2024 | V | 1673 | A | 61 | 20241129 |
| EPI_ISL_12955515 | NSP3 | hCoV-19/Russia/KAM-CRIE-7730388076/2022 | V | 1673 | G | 5 | 20220212 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | V | 1673 | T | 48 | 20230401 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | V | 1673 | stop | 1 | 20210806 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | V | 1673 | H | 5 | 20220118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1673 | R | 1 | 20220210 |
| EPI_ISL_3178548 | NSP3 | hCoV-19/England/OXON-FA411B/2021 | V | 1673 | insLLTstopTTstop | 1 | 20210714 |
| EPI_ISL_10825916 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81358/2022 | V | 1673 | Y | 3 | 20220116 |
| EPI_ISL_1178703 | NSP3 | hCoV-19/England/OXON-F67211/2021 | V | 1673 | E | 2 | 20210204 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | D | 1674 | S | 48 | 20230401 |
| EPI_ISL_13043044 | NSP3 | hCoV-19/USA/NY-PRL-220522_00E11/2022 | D | 1674 | Y | 35 | 20220520 |
| EPI_ISL_19718561 | NSP3 | hCoV-19/New Zealand/25YA0384/2025 | D | 1674 | G | 1240 | 20250125 |
| EPI_ISL_19773715 | NSP3 | hCoV-19/USA/OR-OSPHL10156/2025 | D | 1674 | N | 719 | 20250116 |
| EPI_ISL_1051608 | NSP3 | hCoV-19/England/OXON-F5E787/2021 | D | 1674 | K | 1 | 20210124 |
| EPI_ISL_17722105 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-47626/2023 | D | 1674 | H | 14 | 20230507 |
| EPI_ISL_14718617 | NSP3 | hCoV-19/Scotland/LSPA-3F6DCE7/2022 | D | 1674 | V | 48 | 20220819 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | D | 1674 | Q | 1 | 20210916 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | D | 1674 | I | 2 | 20211228 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | D | 1674 | L | 3 | 20220105 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | D | 1674 | P | 3 | 20211015 |
| EPI_ISL_19785673 | NSP3 | hCoV-19/Brazil/DF-LACENDF-530151790/2025 | D | 1674 | A | 71 | 20250210 |
| EPI_ISL_7493998 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081421-992/2021 | D | 1674 | F | 5 | 20210814 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | D | 1674 | T | 6 | 20231225 |
| EPI_ISL_18372597 | NSP3 | hCoV-19/USA/LA-PHL-LAPH000700B/2023 | D | 1674 | B | 13 | 20230824 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | D | 1674 | stop | 2 | 20211220 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | D | 1674 | del | 42 | 20241024 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | D | 1674 | R | 5 | 20220118 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | D | 1674 | E | 37 | 20230217 |
| EPI_ISL_1167190 | NSP3 | hCoV-19/Egypt/MASRI-C5-010/2020 | S | 1675 | Y | 1 | 20200606 |
| EPI_ISL_19163623 | NSP3 | hCoV-19/USA/NY-URMC-O5S1M151-1/2024 | S | 1675 | N | 43 | 20240506 |
| EPI_ISL_7493998 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081421-992/2021 | S | 1675 | insHRstopstop | 5 | 20210814 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | S | 1675 | V | 5 | 20230217 |
| EPI_ISL_19831687 | NSP3 | hCoV-19/Luxembourg/LNS3034681/2025 | S | 1675 | I | 4228 | 20250219 |
| EPI_ISL_18219199 | NSP3 | hCoV-19/Japan/PG-560659/2023 | S | 1675 | R | 52 | 20230814 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | S | 1675 | Q | 2 | 20220105 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | S | 1675 | H | 2 | 20211228 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | S | 1675 | L | 53 | 20230401 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | S | 1675 | T | 11 | 20231225 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | S | 1675 | del | 39 | 20241024 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | S | 1675 | stop | 5 | 20220118 |
| EPI_ISL_19782366 | NSP3 | hCoV-19/USA/NY-NYCPHL-019507/2024 | S | 1675 | C | 39 | 20240807 |
| EPI_ISL_19784259 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBE36291/2025 | S | 1675 | G | 857 | 20250305 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | S | 1675 | K | 4 | 20211220 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | S | 1675 | E | 5 | 20230217 |
| EPI_ISL_19554379 | NSP3 | hCoV-19/USA/NM-NMDOH-033304/2024 | V | 1676 | F | 65 | 20240925 |
| EPI_ISL_3797054 | NSP3 | hCoV-19/Thailand/Songkhla_SEQ14647/2021 | V | 1676 | D | 3 | 20210816 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1676 | Y | 4 | 20220210 |
| EPI_ISL_7547069 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-091621-1032/2021 | V | 1676 | R | 1 | 20210916 |
| EPI_ISL_10825916 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81358/2022 | V | 1676 | E | 1 | 20220116 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | V | 1676 | insHRstopstopstop | 1 | 20210806 |
| EPI_ISL_19720242 | NSP3 | hCoV-19/USA/DC-DFS-PHL-11389/2025 | V | 1676 | I | 1084 | 20250105 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | V | 1676 | del | 38 | 20241024 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | V | 1676 | M | 1 | 20211220 |
| EPI_ISL_8585956 | NSP3 | hCoV-19/Finland/THL-202129971/2021 | V | 1676 | C | 9 | 20211207 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | V | 1676 | N | 3 | 20211220 |
| EPI_ISL_18379605 | NSP3 | hCoV-19/USA/NY-CDC-QDX85770874/2023 | V | 1676 | G | 2 | 20230928 |
| EPI_ISL_19141710 | NSP3 | hCoV-19/USA/NJ-PHEL-V24005487/2024 | V | 1676 | A | 271 | 20240429 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 1676 | K | 3 | 20230217 |
| EPI_ISL_8803741 | NSP3 | hCoV-19/India/GA-NCCS-C55625/2021 | V | 1676 | insFTLIK | 1 | 20210629 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | V | 1676 | stop | 6 | 20220118 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | V | 1676 | L | 20 | 20230217 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | V | 1676 | insLHQstopstopTYKR | 1 | 20210806 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | V | 1676 | S | 2 | 20210804 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | V | 1676 | T | 4 | 20211225 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1676 | Q | 1 | 20201214 |
| EPI_ISL_19819987 | NSP3 | hCoV-19/Canada/ON-PHL-202504903/2025 | T | 1677 | I | 10544 | 20250313 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | T | 1677 | F | 1 | 20211015 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | T | 1677 | N | 1 | 20210802 |
| EPI_ISL_15125917 | NSP3 | hCoV-19/Japan/PG-356743/2022 | T | 1677 | S | 7 | 20220815 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | T | 1677 | V | 44 | 20230401 |
| EPI_ISL_14443147 | NSP3 | hCoV-19/India/OR-ILSGS18735/2022 | T | 1677 | L | 17 | 20220728 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | T | 1677 | C | 3 | 20220118 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | T | 1677 | del | 35 | 20241024 |
| EPI_ISL_19013431 | NSP3 | hCoV-19/India/OR-RMRC-S116799/2023 | T | 1677 | stop | 4 | 20231225 |
| EPI_ISL_19456547 | NSP3 | hCoV-19/USA/HI-H2330996/2024 | T | 1677 | K | 36 | 20240812 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | T | 1677 | E | 1 | 20210804 |
| EPI_ISL_10825916 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81358/2022 | T | 1677 | W | 1 | 20220116 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | T | 1677 | M | 4 | 20211015 |
| EPI_ISL_2464336 | NSP3 | hCoV-19/South Korea/KDCA4585/2021 | T | 1677 | P | 1 | 20210416 |
| EPI_ISL_19439169 | NSP3 | hCoV-19/USA/CO-CDPHE-42241084/2024 | T | 1677 | R | 11 | 20240831 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1677 | Y | 5 | 20220210 |
| EPI_ISL_19829138 | NSP3 | hCoV-19/USA/PA-CDC-LC1136568/2025 | T | 1677 | A | 215 | 20250401 |
| EPI_ISL_19695340 | NSP3 | hCoV-19/Germany/BE-RKI-I-1147371/2025 | V | 1678 | M | 142 | 20250107 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | V | 1678 | C | 1 | 20210806 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | V | 1678 | del | 40 | 20241024 |
| EPI_ISL_17028423 | NSP3 | hCoV-19/Chile/RM-ISPC-91113/2021 | V | 1678 | R | 5 | 20210509 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | V | 1678 | I | 4 | 20211225 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | V | 1678 | T | 4 | 20211015 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | V | 1678 | insstopRMVPSILLstop | 1 | 20210801 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | V | 1678 | F | 3 | 20230217 |
| EPI_ISL_8470699 | NSP3 | hCoV-19/USA/KY-CDC-ASC210638243/2021 | V | 1678 | E | 4 | 20211220 |
| EPI_ISL_15803652 | NSP3 | hCoV-19/USA/WI-WSLH-2207125/2022 | V | 1678 | G | 51 | 20221009 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | V | 1678 | Q | 1 | 20210801 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | V | 1678 | Y | 4 | 20220118 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | V | 1678 | H | 1 | 20210806 |
| EPI_ISL_7509807 | NSP3 | hCoV-19/USA/CA-CSMC703/2020 | V | 1678 | D | 1 | 20200915 |
| EPI_ISL_3079256 | NSP3 | hCoV-19/England/OXON-FA3DEB/2021 | V | 1678 | stop | 2 | 20210708 |
| EPI_ISL_19600051 | NSP3 | hCoV-19/USA/CA-CDPH-6000020765/2024 | V | 1678 | A | 2658 | 20240821 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | V | 1678 | insQstop | 1 | 20210807 |
| EPI_ISL_19760496 | NSP3 | hCoV-19/USA/IL-CDC-LC1133782/2025 | V | 1678 | L | 478 | 20250222 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | V | 1678 | K | 3 | 20220210 |
| EPI_ISL_19775781 | NSP3 | hCoV-19/USA/CO-CDPHE-43093487/2025 | K | 1679 | N | 3968 | 20250228 |
| EPI_ISL_19286469 | NSP3 | hCoV-19/USA/TX-HMH-M-141933/2024 | K | 1679 | M | 17 | 20240626 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | K | 1679 | del | 49 | 20241024 |
| EPI_ISL_19515720 | NSP3 | hCoV-19/Japan/FR050-0345/2024 | K | 1679 | T | 275 | 20241007 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | K | 1679 | P | 2 | 20211015 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 1679 | A | 4 | 20230217 |
| EPI_ISL_13633236 | NSP3 | hCoV-19/Sweden/03_SE600_000200298384N2/2022 | K | 1679 | stop | 4 | 20220106 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | K | 1679 | V | 6 | 20220105 |
| EPI_ISL_19762802 | NSP3 | hCoV-19/South Africa/NICD-N58823/2024 | K | 1679 | R | 1585 | 20241123 |
| EPI_ISL_842967 | NSP3 | hCoV-19/England/LOND-12879E3/2020 | K | 1679 | Y | 4 | 20201122 |
| EPI_ISL_19565754 | NSP3 | hCoV-19/Sweden/AB-4811301563/2024 | K | 1679 | Q | 177 | 20241101 |
| EPI_ISL_19275978 | NSP3 | hCoV-19/France/NAQ-HCL724000249601/2024 | K | 1679 | E | 186 | 20240624 |
| EPI_ISL_10825916 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81358/2022 | K | 1679 | H | 2 | 20220116 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | K | 1679 | L | 4 | 20220205 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1679 | D | 3 | 20220210 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | K | 1679 | S | 4 | 20220118 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | N | 1680 | M | 2 | 20211220 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | N | 1680 | V | 1 | 20210804 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | N | 1680 | insstopFHP | 1 | 20210806 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | N | 1680 | stop | 39 | 20230401 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | N | 1680 | E | 12 | 20220118 |
| EPI_ISL_19772176 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10688/2025 | N | 1680 | D | 213 | 20250212 |
| EPI_ISL_13633236 | NSP3 | hCoV-19/Sweden/03_SE600_000200298384N2/2022 | N | 1680 | R | 2 | 20220106 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | N | 1680 | insstopTKY | 1 | 20210428 |
| EPI_ISL_19662885 | NSP3 | hCoV-19/Singapore/R64MQ54/2024 | N | 1680 | B | 7 | 20241124 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1680 | F | 1 | 20210318 |
| EPI_ISL_16824820 | NSP3 | hCoV-19/England/QEUH-326B0F8B/2023 | N | 1680 | Y | 9 | 20230123 |
| EPI_ISL_19392805 | NSP3 | hCoV-19/Japan/FR064-0106/2024 | N | 1680 | H | 1242 | 20240806 |
| EPI_ISL_17028423 | NSP3 | hCoV-19/Chile/RM-ISPC-91113/2021 | N | 1680 | L | 2 | 20210509 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1680 | Q | 3 | 20220210 |
| EPI_ISL_19683432 | NSP3 | hCoV-19/Canada/AB-ABPHL-130277/2025 | N | 1680 | S | 750 | 20250103 |
| EPI_ISL_6160182 | NSP3 | hCoV-19/USA/FL-CDC-ASC210375676/2021 | N | 1680 | I | 18 | 20210924 |
| EPI_ISL_8803741 | NSP3 | hCoV-19/India/GA-NCCS-C55625/2021 | N | 1680 | insLMKDIL | 1 | 20210629 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | N | 1680 | insstopRMV | 2 | 20220205 |
| EPI_ISL_10825916 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81358/2022 | N | 1680 | P | 3 | 20220116 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | N | 1680 | del | 89 | 20241024 |
| EPI_ISL_19536745 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YF3PT/2024 | N | 1680 | K | 164 | 20241028 |
| EPI_ISL_19025149 | NSP3 | hCoV-19/Shanxi/SXJCCDC-JCCX0099/2024 | N | 1680 | T | 116 | 20240316 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | G | 1681 | A | 5 | 20230104 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | G | 1681 | Y | 2 | 20230217 |
| EPI_ISL_18216786 | NSP3 | hCoV-19/Brazil/SP-IAL-357277524/2023 | G | 1681 | P | 4 | 20230822 |
| EPI_ISL_19762717 | NSP3 | hCoV-19/Chile/AN-ISPC-14376/2025 | G | 1681 | V | 118 | 20250212 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | G | 1681 | Q | 3 | 20211228 |
| EPI_ISL_19676268 | NSP3 | hCoV-19/Singapore/Y25R3MSC7/2025 | G | 1681 | D | 949 | 20250109 |
| EPI_ISL_7688591 | NSP3 | hCoV-19/Crimea/CRIE-L106V0553u_3196/2021 | G | 1681 | N | 9 | 20211028 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | G | 1681 | E | 7 | 20220118 |
| EPI_ISL_7660349 | NSP3 | hCoV-19/Sweden/UUH-000200252644N2/2021 | G | 1681 | W | 4 | 20211202 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | G | 1681 | del | 91 | 20241024 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | G | 1681 | L | 3 | 20230217 |
| EPI_ISL_19638878 | NSP3 | hCoV-19/Canada/ON-PHL-202425790/2024 | G | 1681 | C | 182 | 20241218 |
| EPI_ISL_13633236 | NSP3 | hCoV-19/Sweden/03_SE600_000200298384N2/2022 | G | 1681 | M | 1 | 20220106 |
| EPI_ISL_14509177 | NSP3 | hCoV-19/USA/VA-VCUVAS3-ZWNQ013419/2022 | G | 1681 | H | 2 | 20220731 |
| EPI_ISL_19799700 | NSP3 | hCoV-19/USA/TX-HMH-M-147623/2025 | G | 1681 | S | 778 | 20250221 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | G | 1681 | R | 47 | 20230401 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | G | 1681 | F | 1 | 20210806 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | G | 1681 | K | 2 | 20220210 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | G | 1681 | insVRR | 2 | 20211225 |
| EPI_ISL_1039255 | NSP3 | hCoV-19/Belgium/UZA-UA-CV0615356478/2021 | S | 1682 | N | 1 | 20210113 |
| EPI_ISL_19091700 | NSP3 | hCoV-19/El Salvador/1059-24-37-LNSP/2024 | S | 1682 | Y | 89 | 20240210 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | S | 1682 | D | 1 | 20210525 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | S | 1682 | insYstopPVF | 2 | 20220210 |
| EPI_ISL_17029629 | NSP3 | hCoV-19/Australia/SA524655/2023 | S | 1682 | L | 8 | 20230221 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | S | 1682 | stop | 2 | 20211228 |
| EPI_ISL_19022467 | NSP3 | hCoV-19/Russia/MAG-RII-MH176411S/2023 | S | 1682 | A | 49 | 20231201 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | S | 1682 | W | 6 | 20220118 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | S | 1682 | M | 39 | 20230401 |
| EPI_ISL_17031913 | NSP3 | hCoV-19/Hebei/SJZ-183/2023 | S | 1682 | P | 8 | 20230214 |
| EPI_ISL_15457462 | NSP3 | hCoV-19/Sweden/03_SE600_500000146490SP/2022 | S | 1682 | insXX | 1 | 20220120 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | S | 1682 | I | 1 | 20220105 |
| EPI_ISL_13633236 | NSP3 | hCoV-19/Sweden/03_SE600_000200298384N2/2022 | S | 1682 | V | 5 | 20220106 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | S | 1682 | insF | 1 | 20210525 |
| EPI_ISL_19744347 | NSP3 | hCoV-19/Austria/AGES-1101365/2024 | S | 1682 | T | 31 | 20241120 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | S | 1682 | del | 86 | 20241024 |
| EPI_ISL_19826302 | NSP3 | hCoV-19/Canada/ON-HSC-202501572-v1/2025 | S | 1682 | F | 22472 | 20250330 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | S | 1682 | insL | 2 | 20230217 |
| EPI_ISL_18059708 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-19G-MM00023R/2023 | S | 1682 | C | 7 | 20230719 |
| EPI_ISL_1051606 | NSP3 | hCoV-19/England/OXON-F5E408/2021 | I | 1683 | R | 1 | 20210123 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | I | 1683 | insLKD | 1 | 20210919 |
| EPI_ISL_18278992 | NSP3 | hCoV-19/Singapore/R58MR85/2023 | I | 1683 | J | 2 | 20230815 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | I | 1683 | del | 72 | 20241024 |
| EPI_ISL_18136651 | NSP3 | hCoV-19/Czech Republic/UMTM58842/2020 | I | 1683 | A | 1 | 20201102 |
| EPI_ISL_19451843 | NSP3 | hCoV-19/USA/NJ-GBW-GKISBBBE27740/2024 | I | 1683 | L | 113 | 20240922 |
| EPI_ISL_19808361 | NSP3 | hCoV-19/Canada/ON-PHL-202504719/2025 | I | 1683 | V | 1717 | 20250306 |
| EPI_ISL_12626444 | NSP3 | hCoV-19/Japan/TKYkbm15600/2022 | I | 1683 | N | 2 | 20220401 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | I | 1683 | K | 3 | 20230104 |
| EPI_ISL_5934794 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689478_CAM_IZSM_COLLI_TIGEM/2021 | I | 1683 | C | 1 | 20211015 |
| EPI_ISL_19391405 | NSP3 | hCoV-19/USA/IL-RIPHL_123355_G/2024 | I | 1683 | F | 38 | 20240813 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1683 | P | 2 | 20220210 |
| EPI_ISL_19697880 | NSP3 | hCoV-19/Singapore/Y25R4MSC78/2025 | I | 1683 | T | 24287 | 20250116 |
| EPI_ISL_16363997 | NSP3 | hCoV-19/Netherlands/NH-AUMC-034637/2022 | I | 1683 | M | 7 | 20221220 |
| EPI_ISL_12916299 | NSP3 | hCoV-19/USA/un-9f0d608afbce658/2021 | I | 1683 | H | 1 | 20210521 |
| EPI_ISL_18900088 | NSP3 | hCoV-19/South Korea/KDCA284737/2024 | I | 1683 | S | 11 | 20240116 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | H | 1684 | S | 5 | 20220302 |
| EPI_ISL_12658804 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1317/2022 | H | 1684 | T | 1 | 20220105 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | H | 1684 | insRstopstop | 5 | 20220210 |
| EPI_ISL_7660349 | NSP3 | hCoV-19/Sweden/UUH-000200252644N2/2021 | H | 1684 | insPS | 1 | 20211202 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | H | 1684 | G | 1 | 20230217 |
| EPI_ISL_18667572 | NSP3 | hCoV-19/Greece/PHL_KEDY_13474/2023 | H | 1684 | Y | 187 | 20231023 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | H | 1684 | P | 39 | 20230401 |
| EPI_ISL_10825916 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81358/2022 | H | 1684 | stop | 3 | 20220116 |
| EPI_ISL_19371529 | NSP3 | hCoV-19/Liaoning/LNCDC-302-4/2024 | H | 1684 | D | 21 | 20240806 |
| EPI_ISL_18085877 | NSP3 | hCoV-19/Scotland/QEUH-2EAFDC1B/2022 | H | 1684 | C | 1 | 20220421 |
| EPI_ISL_19768803 | NSP3 | hCoV-19/USA/NY-CDC-QDX31912886/2025 | H | 1684 | R | 901 | 20250215 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | H | 1684 | I | 4 | 20210919 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | H | 1684 | F | 3 | 20220205 |
| EPI_ISL_18716382 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-2667/2023 | H | 1684 | L | 26 | 20231206 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | H | 1684 | K | 1 | 20211015 |
| EPI_ISL_15829192 | NSP3 | hCoV-19/Russia/KLU-RII-MH108067S/2022 | H | 1684 | V | 1 | 20221025 |
| EPI_ISL_19622858 | NSP3 | hCoV-19/New Zealand/24YA7526/2024 | H | 1684 | Q | 313 | 20241111 |
| EPI_ISL_19806785 | NSP3 | hCoV-19/Spain/CL-UCHV-49802/2024 | H | 1684 | N | 162 | 20241112 |
| EPI_ISL_2903213 | NSP3 | hCoV-19/England/OXON-F88EAD/2020 | H | 1684 | insSV | 1 | 20201128 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | H | 1684 | del | 82 | 20241024 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | H | 1684 | insSI | 1 | 20210813 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | H | 1684 | E | 1 | 20201214 |
| EPI_ISL_19041557 | NSP3 | hCoV-19/Lithuania/MB231219_0386/2023 | L | 1685 | J | 6 | 20231215 |
| EPI_ISL_8751562 | NSP3 | hCoV-19/USA/NY-PA-PBRI-J003/2022 | L | 1685 | G | 1 | 20220110 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | L | 1685 | insLPR | 1 | 20210525 |
| EPI_ISL_10825916 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81358/2022 | L | 1685 | stop | 3 | 20220116 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1685 | E | 1 | 20201214 |
| EPI_ISL_16059362 | NSP3 | hCoV-19/Australia/NSW-ICPMR-38438/2022 | L | 1685 | P | 16 | 20221123 |
| EPI_ISL_18331071 | NSP3 | hCoV-19/Japan/PG-572522/2023 | L | 1685 | V | 11 | 20230915 |
| EPI_ISL_11333350 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-37/2022 | L | 1685 | H | 3 | 20220210 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | L | 1685 | C | 6 | 20220210 |
| EPI_ISL_3299465 | NSP3 | hCoV-19/Sweden/UUH-000199814345N2/2021 | L | 1685 | insLVMKLRETC | 1 | 20210428 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1685 | N | 1 | 20220210 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | L | 1685 | S | 36 | 20230401 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | L | 1685 | M | 3 | 20220224 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | L | 1685 | insstopstopCYSEE | 1 | 20200721 |
| EPI_ISL_19822824 | NSP3 | hCoV-19/Denmark/DCGC-692094/2025 | L | 1685 | F | 3719 | 20250324 |
| EPI_ISL_12934445 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-020522-1665/2022 | L | 1685 | T | 4 | 20220205 |
| EPI_ISL_19812669 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20750/2024 | L | 1685 | R | 4 | 20241002 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | L | 1685 | del | 83 | 20241024 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | L | 1685 | insSLLstopstop | 5 | 20220118 |
| EPI_ISL_19517423 | NSP3 | hCoV-19/Japan/FR015-0253/2024 | L | 1685 | I | 88 | 20240720 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | L | 1685 | K | 5 | 20220227 |
| EPI_ISL_17717678 | NSP3 | hCoV-19/India/CH-NII-1778/2023 | Y | 1686 | N | 16 | 20230417 |
| EPI_ISL_15829192 | NSP3 | hCoV-19/Russia/KLU-RII-MH108067S/2022 | Y | 1686 | Q | 1 | 20221025 |
| EPI_ISL_18747913 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019670_01/2023 | Y | 1686 | C | 55 | 20231010 |
| EPI_ISL_3587496 | NSP3 | hCoV-19/Spain/CL-COV08801/2021 | Y | 1686 | stop | 3 | 20210707 |
| EPI_ISL_15614873 | NSP3 | hCoV-19/India/NA-ILSGS19751/2022 | Y | 1686 | F | 8 | 20220901 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | Y | 1686 | M | 5 | 20230104 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | Y | 1686 | I | 35 | 20230401 |
| EPI_ISL_1208530 | NSP3 | hCoV-19/Spain/CT-HUGTiPR006BX5E11/2021 | Y | 1686 | insLLstopstopS | 2 | 20210216 |
| EPI_ISL_7551918 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082521-1102/2021 | Y | 1686 | insLstopstopS | 1 | 20210825 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | Y | 1686 | S | 18 | 20220118 |
| EPI_ISL_19638821 | NSP3 | hCoV-19/Canada/ON-PHL-202425706/2024 | Y | 1686 | H | 223 | 20241218 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | Y | 1686 | V | 4 | 20230217 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | Y | 1686 | del | 83 | 20241024 |
| EPI_ISL_10924597 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-11742/2022 | Y | 1686 | T | 7 | 20220227 |
| EPI_ISL_7508846 | NSP3 | hCoV-19/USA/CA-CSMC266/2021 | Y | 1686 | W | 3 | 20210224 |
| EPI_ISL_14443147 | NSP3 | hCoV-19/India/OR-ILSGS18735/2022 | Y | 1686 | L | 16 | 20220728 |
| EPI_ISL_6508437 | NSP3 | hCoV-19/Greece/V4810/2021 | Y | 1686 | D | 3 | 20211111 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | Y | 1686 | R | 2 | 20210806 |
| EPI_ISL_15749163 | NSP3 | hCoV-19/USA/NY-PRL-221028_01G19/2022 | F | 1687 | Y | 9 | 20221025 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | F | 1687 | K | 3 | 20230104 |
| EPI_ISL_14613024 | NSP3 | hCoV-19/Canada/AB-ABPHL-75402/2022 | F | 1687 | I | 19 | 20220718 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | F | 1687 | R | 1 | 20230217 |
| EPI_ISL_8751562 | NSP3 | hCoV-19/USA/NY-PA-PBRI-J003/2022 | F | 1687 | A | 2 | 20220110 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | F | 1687 | Q | 3 | 20210801 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | F | 1687 | del | 86 | 20241024 |
| EPI_ISL_13633236 | NSP3 | hCoV-19/Sweden/03_SE600_000200298384N2/2022 | F | 1687 | T | 2 | 20220106 |
| EPI_ISL_4530134 | NSP3 | hCoV-19/England/PHEC-3G06FG55/2021 | F | 1687 | insMKLRETCHYSLKDQstopILLTSLLTSLIVLQstopRMVP | 1 | 20210919 |
| EPI_ISL_18396223 | NSP3 | hCoV-19/Japan/PG-576738/2023 | F | 1687 | C | 14 | 20230903 |
| EPI_ISL_14443147 | NSP3 | hCoV-19/India/OR-ILSGS18735/2022 | F | 1687 | V | 24 | 20220728 |
| EPI_ISL_18056619 | NSP3 | hCoV-19/Singapore/R52MR9/2023 | F | 1687 | S | 15 | 20230724 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | F | 1687 | stop | 3 | 20211203 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | F | 1687 | W | 13 | 20220118 |
| EPI_ISL_19596968 | NSP3 | hCoV-19/env/Germany/BY-LGL-6391319/2024 | F | 1687 | L | 72 | 20241111 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | D | 1688 | L | 5 | 20220302 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | D | 1688 | K | 2 | 20211102 |
| EPI_ISL_19616097 | NSP3 | hCoV-19/Sweden/T-60235279/2024 | D | 1688 | A | 140 | 20241204 |
| EPI_ISL_19826265 | NSP3 | hCoV-19/Canada/ON-HSC-202501521-v1/2025 | D | 1688 | G | 882 | 20250312 |
| EPI_ISL_19596968 | NSP3 | hCoV-19/env/Germany/BY-LGL-6391319/2024 | D | 1688 | I | 13 | 20241111 |
| EPI_ISL_14701009 | NSP3 | hCoV-19/England/PHEC-YYGSW4R/2022 | D | 1688 | V | 42 | 20220815 |
| EPI_ISL_19825149 | NSP3 | hCoV-19/USA/CA-PFZ05076/2025 | D | 1688 | N | 200 | 20250324 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | D | 1688 | S | 16 | 20220118 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 1688 | insLI | 5 | 20230108 |
| EPI_ISL_19552630 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YRRM4/2024 | D | 1688 | del | 82 | 20241024 |
| EPI_ISL_14443147 | NSP3 | hCoV-19/India/OR-ILSGS18735/2022 | D | 1688 | M | 9 | 20220728 |
| EPI_ISL_4198511 | NSP3 | hCoV-19/Italy/SAR-3119/2021 | D | 1688 | P | 3 | 20210902 |
| EPI_ISL_16168108 | NSP3 | hCoV-19/USA/AZ-CDC-LC0951004/2022 | D | 1688 | B | 5 | 20221201 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | D | 1688 | stop | 5 | 20211203 |
| EPI_ISL_15891215 | NSP3 | hCoV-19/Russia/MOW-CRIE-7776938390/2022 | D | 1688 | Y | 30 | 20220920 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | D | 1688 | insLIKLV | 2 | 20211115 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | D | 1688 | T | 33 | 20230401 |
| EPI_ISL_13047372 | NSP3 | hCoV-19/France/IDF-cerba-22T0764490/2022 | D | 1688 | E | 47 | 20220524 |
| EPI_ISL_2080873 | NSP3 | hCoV-19/Italy/ABR-DN393/2021 | D | 1688 | Q | 1 | 20210210 |
| EPI_ISL_18002265 | NSP3 | hCoV-19/Cameroon/LNSP-004-B022722/2022 | D | 1688 | H | 5 | 20221010 |
| EPI_ISL_19284487 | NSP3 | hCoV-19/Brazil/PE-FIOCRUZ-IAM16817/2024 | K | 1689 | N | 157 | 20240702 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | K | 1689 | A | 3 | 20210525 |
| EPI_ISL_14558897 | NSP3 | hCoV-19/USA/NJ-CDC-STM-GQ99GTVEF/2022 | K | 1689 | T | 19 | 20220804 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 1689 | I | 22 | 20230104 |
| EPI_ISL_12934346 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011722-1566/2022 | K | 1689 | insWFHPSLLstopstop | 4 | 20220117 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | K | 1689 | Q | 9 | 20220302 |
| EPI_ISL_18233641 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48053/2023 | K | 1689 | stop | 5 | 20230804 |
| EPI_ISL_18233647 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48059/2023 | K | 1689 | L | 34 | 20230808 |
| EPI_ISL_16282440 | NSP3 | hCoV-19/Canary Islands/HUGCDN-03123179/2022 | K | 1689 | E | 16 | 20221103 |
| EPI_ISL_3079049 | NSP3 | hCoV-19/England/OXON-FA2AA9/2021 | K | 1689 | insLRETCHYSLKDQstopILLTSLLTS | 1 | 20210702 |
| EPI_ISL_19793642 | NSP3 | hCoV-19/USA/MN-MDH-46554/2025 | K | 1689 | R | 871 | 20250220 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 1689 | V | 2 | 20230217 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | K | 1689 | S | 3 | 20210804 |
| EPI_ISL_10380267 | NSP3 | hCoV-19/England/DHSC-CYNDXZQ/2021 | K | 1689 | insI | 1 | 20211220 |
| EPI_ISL_18936191 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00180/2023 | K | 1689 | del | 82 | 20230424 |
| EPI_ISL_7508846 | NSP3 | hCoV-19/USA/CA-CSMC266/2021 | K | 1689 | P | 2 | 20210224 |
| EPI_ISL_6357248 | NSP3 | hCoV-19/Romania/33055/2021 | K | 1689 | Y | 1 | 20210104 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 1690 | L | 21 | 20230108 |
| EPI_ISL_19361983 | NSP3 | hCoV-19/USA/CA-CDC-LC1114867/2024 | A | 1690 | T | 850 | 20240807 |
| EPI_ISL_12017330 | NSP3 | hCoV-19/Chile/BI-124507/2021 | A | 1690 | M | 2 | 20210709 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | A | 1690 | I | 28 | 20230401 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | A | 1690 | stop | 2 | 20220302 |
| EPI_ISL_4348473 | NSP3 | hCoV-19/Thailand/ChaiNat_SEQ16157/2021 | A | 1690 | E | 1 | 20210907 |
| EPI_ISL_14615689 | NSP3 | hCoV-19/USA/CA-SLOPH-C1683/2022 | A | 1690 | F | 3 | 20220816 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | A | 1690 | R | 2 | 20211115 |
| EPI_ISL_19289687 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBC84555/2024 | A | 1690 | S | 178 | 20240714 |
| EPI_ISL_583297 | NSP3 | hCoV-19/USA/MI-UM-10035741674/2020 | A | 1690 | G | 3 | 20200901 |
| EPI_ISL_16282440 | NSP3 | hCoV-19/Canary Islands/HUGCDN-03123179/2022 | A | 1690 | W | 3 | 20221103 |
| EPI_ISL_18594476 | NSP3 | hCoV-19/Belgium/AZDelta-2348-14302/2023 | A | 1690 | P | 16 | 20231102 |
| EPI_ISL_19529991 | NSP3 | hCoV-19/Ireland/LK-UHL-691462/2024 | A | 1690 | D | 740 | 20241002 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | A | 1690 | del | 80 | 20230217 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | A | 1690 | Q | 1 | 20220804 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | A | 1690 | insLLstopstopSW | 1 | 20200721 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | A | 1690 | N | 2 | 20210806 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | A | 1690 | Y | 1 | 20210726 |
| EPI_ISL_19788245 | NSP3 | hCoV-19/Brazil/SP-FIOCRUZ-352/2025 | A | 1690 | V | 2208 | 20250210 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | A | 1690 | insWP | 1 | 20200729 |
| EPI_ISL_13633236 | NSP3 | hCoV-19/Sweden/03_SE600_000200298384N2/2022 | A | 1690 | K | 6 | 20220106 |
| EPI_ISL_19558571 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55571/2024 | G | 1691 | C | 184 | 20241110 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | G | 1691 | N | 1 | 20230419 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | G | 1691 | Y | 2 | 20211220 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | G | 1691 | del | 94 | 20230217 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | G | 1691 | insL | 9 | 20230401 |
| EPI_ISL_8803741 | NSP3 | hCoV-19/India/GA-NCCS-C55625/2021 | G | 1691 | E | 2 | 20210629 |
| EPI_ISL_18322027 | NSP3 | hCoV-19/USA/TX-HMH-M-133874/2023 | G | 1691 | W | 13 | 20230911 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1691 | Q | 2 | 20220210 |
| EPI_ISL_16282440 | NSP3 | hCoV-19/Canary Islands/HUGCDN-03123179/2022 | G | 1691 | F | 1 | 20221103 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | G | 1691 | P | 1 | 20211006 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | G | 1691 | I | 3 | 20230217 |
| EPI_ISL_19706708 | NSP3 | hCoV-19/Italy/UMB-LAOP-167-4-06/2025 | G | 1691 | S | 1019 | 20250114 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | G | 1691 | H | 1 | 20230217 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | G | 1691 | T | 2 | 20210919 |
| EPI_ISL_14443147 | NSP3 | hCoV-19/India/OR-ILSGS18735/2022 | G | 1691 | R | 10 | 20220728 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | G | 1691 | K | 12 | 20230401 |
| EPI_ISL_1051608 | NSP3 | hCoV-19/England/OXON-F5E787/2021 | G | 1691 | stop | 1 | 20210124 |
| EPI_ISL_16013083 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-118310/2022 | G | 1691 | A | 2 | 20221114 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | G | 1691 | L | 17 | 20220118 |
| EPI_ISL_19831376 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56875/2025 | G | 1691 | D | 1206 | 20250317 |
| EPI_ISL_18530096 | NSP3 | hCoV-19/USA/LA-EVTL20529/2023 | G | 1691 | V | 79 | 20231031 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | Q | 1692 | insV | 2 | 20220531 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | Q | 1692 | N | 2 | 20210525 |
| EPI_ISL_19414086 | NSP3 | hCoV-19/USA/LA-EVTL22702/2024 | Q | 1692 | R | 336 | 20240808 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | Q | 1692 | M | 3 | 20220302 |
| EPI_ISL_19367588 | NSP3 | hCoV-19/USA/TN-UM-L1447748366193/2024 | Q | 1692 | H | 77 | 20240729 |
| EPI_ISL_9018106 | NSP3 | hCoV-19/India/WB-INSACOG-1931502589807/2021 | Q | 1692 | insT | 1 | 20211220 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | Q | 1692 | insIstop | 1 | 20210726 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | Q | 1692 | insS | 1 | 20211220 |
| EPI_ISL_19808519 | NSP3 | hCoV-19/Canada/ON-PHL-202504872/2025 | Q | 1692 | K | 1387 | 20250313 |
| EPI_ISL_10980340 | NSP3 | hCoV-19/Nigeria/NCDC-NR-GL-001560/2021 | Q | 1692 | T | 2 | 20211218 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 1692 | F | 1 | 20210318 |
| EPI_ISL_6357248 | NSP3 | hCoV-19/Romania/33055/2021 | Q | 1692 | A | 1 | 20210104 |
| EPI_ISL_19082392 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140335/2024 | Q | 1692 | S | 19 | 20240304 |
| EPI_ISL_14897472 | NSP3 | hCoV-19/USA/MI-CDC-STM-WCH83KD88/2022 | Q | 1692 | E | 56 | 20220826 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | Q | 1692 | I | 2 | 20210801 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | Q | 1692 | V | 12 | 20230401 |
| EPI_ISL_7347140 | NSP3 | hCoV-19/England/BRBR-2CBFCFB/2021 | Q | 1692 | Z | 1 | 20211130 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | Q | 1692 | C | 2 | 20220804 |
| EPI_ISL_19784749 | NSP3 | hCoV-19/Japan/FR021-0210/2025 | Q | 1692 | L | 270 | 20250226 |
| EPI_ISL_12146168 | NSP3 | hCoV-19/Turkey/HSGM-GS1562/2022 | Q | 1692 | P | 375 | 20220401 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | Q | 1692 | G | 1 | 20211225 |
| EPI_ISL_14179202 | NSP3 | hCoV-19/USA/TX-HMH-M-107431/2022 | Q | 1692 | stop | 17 | 20220716 |
| EPI_ISL_14749439 | NSP3 | hCoV-19/India/OR-ILSGS17655/2022 | Q | 1692 | insTCHYSLKDQstopILLTSLLTSLIVLQstopRMVPSIFTLIKLV | 3 | 20220704 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | Q | 1692 | del | 89 | 20230217 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | K | 1693 | L | 5 | 20230217 |
| EPI_ISL_10820871 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-80043/2022 | K | 1693 | D | 3 | 20220113 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | K | 1693 | I | 4 | 20211228 |
| EPI_ISL_18877260 | NSP3 | hCoV-19/Spain/PV-HUD-70507457/2024 | K | 1693 | Q | 282 | 20240126 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | K | 1693 | S | 6 | 20230419 |
| EPI_ISL_19828185 | NSP3 | hCoV-19/Australia/QLD0x0154DF/2025 | K | 1693 | N | 13374 | 20250402 |
| EPI_ISL_1109635 | NSP3 | hCoV-19/USA/TN-BEM-0001/2021 | K | 1693 | insLILLTstopTTstopELI | 1 | 20210217 |
| EPI_ISL_17275330 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45855/2023 | K | 1693 | V | 4 | 20230217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1693 | C | 1 | 20201214 |
| EPI_ISL_1051608 | NSP3 | hCoV-19/England/OXON-F5E787/2021 | K | 1693 | insI | 1 | 20210124 |
| EPI_ISL_12017330 | NSP3 | hCoV-19/Chile/BI-124507/2021 | K | 1693 | P | 1 | 20210709 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | K | 1693 | del | 73 | 20230217 |
| EPI_ISL_19451500 | NSP3 | hCoV-19/Netherlands/UT-RIVM-142007/2024 | K | 1693 | T | 326 | 20240913 |
| EPI_ISL_19691741 | NSP3 | hCoV-19/Canada/ON-PHL-202502048/2025 | K | 1693 | E | 133 | 20250116 |
| EPI_ISL_19058989 | NSP3 | hCoV-19/Australia/NSW-ICPMR-53420/2024 | K | 1693 | M | 50 | 20240404 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | K | 1693 | insLMKDILSLILLTstopTTstopELI | 2 | 20211012 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | K | 1693 | insDILSLILLTstopTTstopEPI | 1 | 20211115 |
| EPI_ISL_14443147 | NSP3 | hCoV-19/India/OR-ILSGS18735/2022 | K | 1693 | insCHYSL | 1 | 20220728 |
| EPI_ISL_8803733 | NSP3 | hCoV-19/India/GA-NCCS-3055200157771/2021 | K | 1693 | insDILSLILLTstopTTstopELI | 1 | 20210804 |
| EPI_ISL_17020828 | NSP3 | hCoV-19/Chile/RM-197652/2021 | K | 1693 | G | 2 | 20211224 |
| EPI_ISL_19693981 | NSP3 | hCoV-19/USA/NE-NPHL-RP250606/2025 | K | 1693 | R | 1305 | 20250116 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | T | 1694 | R | 21 | 20230401 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | T | 1694 | D | 9 | 20220117 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | T | 1694 | V | 5 | 20211228 |
| EPI_ISL_18936244 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00133/2023 | T | 1694 | Y | 1 | 20230419 |
| EPI_ISL_18980740 | NSP3 | hCoV-19/USA/TX-HMH-M-140021/2024 | T | 1694 | S | 14 | 20240225 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | T | 1694 | G | 1 | 20211225 |
| EPI_ISL_17020828 | NSP3 | hCoV-19/Chile/RM-197652/2021 | T | 1694 | F | 3 | 20211224 |
| EPI_ISL_17620506 | NSP3 | hCoV-19/Nepal/NPHL-S-2458/2023 | T | 1694 | L | 28 | 20230402 |
| EPI_ISL_10943903 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8408/2022 | T | 1694 | W | 1 | 20220206 |
| EPI_ISL_17239701 | NSP3 | hCoV-19/Canada/AB-ABPHL-94603/2023 | T | 1694 | A | 32 | 20230303 |
| EPI_ISL_18927239 | NSP3 | hCoV-19/Ukraine/HCL024014233701/2023 | T | 1694 | N | 142 | 20231226 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | T | 1694 | K | 1 | 20210806 |
| EPI_ISL_19703422 | NSP3 | hCoV-19/USA/NY-PRL-250128_81H03/2025 | T | 1694 | I | 3059 | 20250118 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | T | 1694 | del | 72 | 20230217 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | T | 1694 | M | 1 | 20211220 |
| EPI_ISL_18474992 | NSP3 | hCoV-19/USA/NY-GBW-H10-016-8663/2023 | T | 1694 | P | 15 | 20231017 |
| EPI_ISL_3078866 | NSP3 | hCoV-19/England/OXON-FA1415/2021 | T | 1694 | C | 3 | 20210709 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | Y | 1695 | S | 35 | 20220302 |
| EPI_ISL_19322537 | NSP3 | hCoV-19/Italy/UMB-LAOP-160-3-07/2024 | Y | 1695 | H | 56 | 20240720 |
| EPI_ISL_840251 | NSP3 | hCoV-19/England/OXON-F41B21/2020 | Y | 1695 | R | 1 | 20201213 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | Y | 1695 | insstop | 3 | 20220117 |
| EPI_ISL_3078866 | NSP3 | hCoV-19/England/OXON-FA1415/2021 | Y | 1695 | insYSLKDQstopILLTSLLT | 1 | 20210709 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | Y | 1695 | W | 1 | 20210809 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Y | 1695 | D | 2 | 20221226 |
| EPI_ISL_17620506 | NSP3 | hCoV-19/Nepal/NPHL-S-2458/2023 | Y | 1695 | M | 8 | 20230402 |
| EPI_ISL_19794746 | NSP3 | hCoV-19/Japan/FR044-0024/2025 | Y | 1695 | C | 45 | 20250204 |
| EPI_ISL_4852859 | NSP3 | hCoV-19/USA/IN-INSPHL-08977/2021 | Y | 1695 | N | 1 | 20210812 |
| EPI_ISL_17506872 | NSP3 | hCoV-19/Sweden/03_SE600_500000098489SP/2022 | Y | 1695 | insXXXX | 1 | 20220127 |
| EPI_ISL_14179285 | NSP3 | hCoV-19/USA/TX-HMH-M-107589/2022 | Y | 1695 | stop | 11 | 20220716 |
| EPI_ISL_17427528 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2861/2023 | Y | 1695 | F | 18 | 20230401 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | Y | 1695 | del | 77 | 20230401 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | Y | 1695 | G | 2 | 20211220 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | Y | 1695 | L | 45 | 20230401 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | Y | 1695 | K | 3 | 20211015 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | Y | 1695 | I | 3 | 20220804 |
| EPI_ISL_3299465 | NSP3 | hCoV-19/Sweden/UUH-000199814345N2/2021 | Y | 1695 | insstopPVFLHRstopstopCYSEEWFHPSLLstopstopSWSKTY | 1 | 20210428 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | Y | 1695 | insMK | 1 | 20211229 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | Y | 1695 | V | 15 | 20220209 |
| EPI_ISL_19444253 | NSP3 | hCoV-19/Northern Ireland/CLIMB-CM7YRIAM/2024 | E | 1696 | D | 31 | 20240828 |
| EPI_ISL_17620506 | NSP3 | hCoV-19/Nepal/NPHL-S-2458/2023 | E | 1696 | del | 85 | 20230402 |
| EPI_ISL_19108476 | NSP3 | hCoV-19/England/CLIMB-CM7Y8QYF/2024 | E | 1696 | K | 60 | 20240422 |
| EPI_ISL_5986005 | NSP3 | hCoV-19/USA/TN-CDC-ASC210325437/2021 | E | 1696 | V | 5 | 20211001 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | E | 1696 | C | 1 | 20211225 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | E | 1696 | M | 20 | 20230401 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | E | 1696 | W | 1 | 20211220 |
| EPI_ISL_1167191 | NSP3 | hCoV-19/Egypt/MASRI-C5-017/2020 | E | 1696 | F | 1 | 20200525 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | E | 1696 | R | 1 | 20210813 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | E | 1696 | L | 3 | 20221226 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 1696 | Y | 1 | 20210318 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | E | 1696 | S | 5 | 20220118 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | E | 1696 | Q | 10 | 20220804 |
| EPI_ISL_18921364 | NSP3 | hCoV-19/USA/WI-CDC-LC1096155/2024 | E | 1696 | G | 45 | 20240209 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | E | 1696 | N | 1 | 20201214 |
| EPI_ISL_19108560 | NSP3 | hCoV-19/England/CLIMB-CM7YF9G3/2024 | E | 1696 | stop | 7 | 20240426 |
| EPI_ISL_11305177 | NSP3 | hCoV-19/England/BRBR-3AECF19/2022 | E | 1696 | Z | 5 | 20220316 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | E | 1696 | T | 1 | 20210525 |
| EPI_ISL_18740925 | NSP3 | hCoV-19/Denmark/DCGC-669221/2023 | E | 1696 | A | 24 | 20231204 |
| EPI_ISL_10943903 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8408/2022 | E | 1696 | H | 1 | 20220206 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | R | 1697 | V | 9 | 20211115 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | R | 1697 | N | 2 | 20221226 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | R | 1697 | Q | 4 | 20211228 |
| EPI_ISL_18256460 | NSP3 | hCoV-19/USA/AZ-ASPHL-2384/2023 | R | 1697 | I | 80 | 20230827 |
| EPI_ISL_19714681 | NSP3 | hCoV-19/Russia/VLG-RII-MH221738S/2024 | R | 1697 | G | 50 | 20241209 |
| EPI_ISL_17730202 | NSP3 | hCoV-19/India/CT-ILS-GS20578/2023 | R | 1697 | stop | 10 | 20230419 |
| EPI_ISL_17730267 | NSP3 | hCoV-19/India/CT-ILS-GS20855/2023 | R | 1697 | T | 40 | 20230427 |
| EPI_ISL_13633268 | NSP3 | hCoV-19/Sweden/03_SE600_000200302949N2/2022 | R | 1697 | insT | 4 | 20220106 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | R | 1697 | L | 7 | 20220118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 1697 | A | 1 | 20220210 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | R | 1697 | E | 1 | 20210804 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | R | 1697 | M | 1 | 20220804 |
| EPI_ISL_7551899 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-092521-1077/2021 | R | 1697 | D | 3 | 20210925 |
| EPI_ISL_3923187 | NSP3 | hCoV-19/USA/ID-IBL-640578/2020 | R | 1697 | insPstopstop | 1 | 20200807 |
| EPI_ISL_10943903 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8408/2022 | R | 1697 | P | 4 | 20220206 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | R | 1697 | del | 80 | 20230217 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | R | 1697 | insQPESstopstop | 1 | 20210801 |
| EPI_ISL_19687538 | NSP3 | hCoV-19/USA/NY-PRL-250114_82D02/2024 | R | 1697 | K | 282 | 20241230 |
| EPI_ISL_19218175 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004394873/2024 | R | 1697 | S | 55 | 20240216 |
| EPI_ISL_15900731 | NSP3 | hCoV-19/Germany/SN-RKI-I-1029307/2022 | H | 1698 | insSL | 1 | 20220721 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | H | 1698 | del | 98 | 20230217 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | H | 1698 | I | 5 | 20220118 |
| EPI_ISL_19102140 | NSP3 | hCoV-19/USA/TX-IVY-G43R99R7/2024 | H | 1698 | R | 112 | 20240226 |
| EPI_ISL_19592975 | NSP3 | hCoV-19/USA/NY-SUNYQB-XL2951/2024 | H | 1698 | Q | 134 | 20241106 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | H | 1698 | insKKstopQRTCPANPSSTDGstopSWSKDRLMKKTLP | 1 | 20210806 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | H | 1698 | K | 3 | 20211203 |
| EPI_ISL_12934340 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011622-1560/2022 | H | 1698 | insF | 2 | 20220116 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 1698 | T | 2 | 20220210 |
| EPI_ISL_18964250 | NSP3 | hCoV-19/USA/CA-CDPH-500133872/2024 | H | 1698 | F | 31 | 20240126 |
| EPI_ISL_10943903 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8408/2022 | H | 1698 | S | 2 | 20220206 |
| EPI_ISL_18849104 | NSP3 | hCoV-19/USA/CA-CDPH-500131483/2023 | H | 1698 | N | 23 | 20231219 |
| EPI_ISL_19791373 | NSP3 | hCoV-19/Russia/SPE-RII-MH225290S/2025 | H | 1698 | Y | 737 | 20250201 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | H | 1698 | M | 1 | 20201214 |
| EPI_ISL_17620506 | NSP3 | hCoV-19/Nepal/NPHL-S-2458/2023 | H | 1698 | D | 28 | 20230402 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | H | 1698 | V | 1 | 20221226 |
| EPI_ISL_19177336 | NSP3 | hCoV-19/USA/MI-MIS-L375552556/2024 | H | 1698 | L | 101 | 20240322 |
| EPI_ISL_11348077 | NSP3 | hCoV-19/Belarus/VI-CRIE-7735753957/2021 | H | 1698 | P | 2 | 20211222 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | H | 1698 | E | 3 | 20210928 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | H | 1698 | stop | 1 | 20220804 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | S | 1699 | stop | 1 | 20210801 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | S | 1699 | L | 19 | 20220209 |
| EPI_ISL_19064905 | NSP3 | hCoV-19/Canada/NS-NSH-708309/2024 | S | 1699 | T | 21 | 20240414 |
| EPI_ISL_19189773 | NSP3 | hCoV-19/France/HDF-IPP06080/2024 | S | 1699 | A | 157 | 20240528 |
| EPI_ISL_17020828 | NSP3 | hCoV-19/Chile/RM-197652/2021 | S | 1699 | N | 3 | 20211224 |
| EPI_ISL_19813404 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56803/2025 | S | 1699 | P | 1033 | 20250319 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | S | 1699 | C | 9 | 20211115 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | S | 1699 | K | 2 | 20220804 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | S | 1699 | del | 30 | 20230217 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | S | 1699 | H | 1 | 20211225 |
| EPI_ISL_2707330 | NSP3 | hCoV-19/England/OXON-F836AA/2021 | S | 1699 | E | 1 | 20210609 |
| EPI_ISL_19826396 | NSP3 | hCoV-19/Canada/ON-PHL-202505096/2025 | S | 1699 | F | 2842 | 20250329 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | S | 1699 | M | 44 | 20211228 |
| EPI_ISL_17620506 | NSP3 | hCoV-19/Nepal/NPHL-S-2458/2023 | S | 1699 | I | 27 | 20230402 |
| EPI_ISL_12581352 | NSP3 | hCoV-19/Turkey/HSGM-GS2451/2022 | S | 1699 | G | 2 | 20220405 |
| EPI_ISL_19578231 | NSP3 | hCoV-19/Botswana/R242B05_BHP/2024 | S | 1699 | Y | 37 | 20241126 |
| EPI_ISL_8146235 | NSP3 | hCoV-19/Sweden/UUH-500000075418SP/2021 | S | 1699 | insXX | 1 | 20211209 |
| EPI_ISL_951296 | NSP3 | hCoV-19/England/OXON-F50A8C/2021 | L | 1700 | D | 1 | 20210111 |
| EPI_ISL_19784478 | NSP3 | hCoV-19/Australia/QLD0x015348/2025 | L | 1700 | F | 1340 | 20250226 |
| EPI_ISL_17020828 | NSP3 | hCoV-19/Chile/RM-197652/2021 | L | 1700 | W | 2 | 20211224 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | L | 1700 | N | 1 | 20211225 |
| EPI_ISL_2707330 | NSP3 | hCoV-19/England/OXON-F836AA/2021 | L | 1700 | T | 1 | 20210609 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | L | 1700 | del | 29 | 20230217 |
| EPI_ISL_19386032 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBC67108/2024 | L | 1700 | V | 87 | 20240827 |
| EPI_ISL_18899704 | NSP3 | hCoV-19/South Korea/KDCA284945/2024 | L | 1700 | P | 75 | 20240117 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 1700 | H | 4 | 20221226 |
| EPI_ISL_19476501 | NSP3 | hCoV-19/USA/CO-CDPHE-42306956/2024 | L | 1700 | I | 152 | 20240903 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | L | 1700 | C | 4 | 20211228 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1700 | Q | 1 | 20201214 |
| EPI_ISL_19286425 | NSP3 | hCoV-19/USA/TX-HMH-M-141788/2024 | L | 1700 | J | 11 | 20240623 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | L | 1700 | K | 1 | 20210801 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | L | 1700 | insY | 1 | 20210801 |
| EPI_ISL_16414946 | NSP3 | hCoV-19/France/CVL-HMN-22122210444/2022 | L | 1700 | R | 49 | 20221212 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | L | 1700 | M | 17 | 20220209 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | L | 1700 | S | 5 | 20210928 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | S | 1701 | V | 2 | 20210801 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | S | 1701 | D | 1 | 20210928 |
| EPI_ISL_951296 | NSP3 | hCoV-19/England/OXON-F50A8C/2021 | S | 1701 | G | 1 | 20210111 |
| EPI_ISL_7551918 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082521-1102/2021 | S | 1701 | insFCstopLRQPESstopstopHstop | 1 | 20210825 |
| EPI_ISL_17020828 | NSP3 | hCoV-19/Chile/RM-197652/2021 | S | 1701 | N | 2 | 20211224 |
| EPI_ISL_19750228 | NSP3 | hCoV-19/USA/NH-CDC-2-8210875/2024 | S | 1701 | T | 12 | 20241127 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | S | 1701 | insV | 1 | 20210919 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1701 | Y | 4 | 20220210 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | S | 1701 | I | 2 | 20210525 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | S | 1701 | L | 5 | 20211012 |
| EPI_ISL_17780860 | NSP3 | hCoV-19/Spain/CL-HCUV-42004/2023 | S | 1701 | R | 2 | 20230507 |
| EPI_ISL_19065047 | NSP3 | hCoV-19/Canada/BC-BCCDC-707302/2024 | S | 1701 | C | 19 | 20240325 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | S | 1701 | W | 1 | 20211225 |
| EPI_ISL_19092603 | NSP3 | hCoV-19/South Korea/KDCA291795/2024 | S | 1701 | A | 119 | 20240408 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | S | 1701 | del | 34 | 20230217 |
| EPI_ISL_19703927 | NSP3 | hCoV-19/USA/CA-LACPHL-AY09950/2025 | S | 1701 | P | 1482 | 20250115 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | S | 1701 | insstopTTstop | 1 | 20220118 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | S | 1701 | K | 19 | 20220804 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | S | 1701 | Q | 4 | 20211228 |
| EPI_ISL_17708937 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200394880N2/2022 | S | 1701 | insL | 2 | 20220421 |
| EPI_ISL_19818598 | NSP3 | hCoV-19/USA/DE-DHSS-1265/2025 | S | 1701 | F | 996 | 20250304 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 1702 | C | 1 | 20220210 |
| EPI_ISL_19594258 | NSP3 | hCoV-19/South Korea/GJ-HERI-K2254/2024 | H | 1702 | L | 198 | 20240806 |
| EPI_ISL_18959487 | NSP3 | hCoV-19/USA/UT-UPHL-240124619280/2023 | H | 1702 | N | 42 | 20231225 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | H | 1702 | S | 40 | 20211228 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | H | 1702 | G | 1 | 20210928 |
| EPI_ISL_19067256 | NSP3 | hCoV-19/USA/NY-URMC-O3S1N157-1/2024 | H | 1702 | P | 45 | 20240321 |
| EPI_ISL_951296 | NSP3 | hCoV-19/England/OXON-F50A8C/2021 | H | 1702 | K | 1 | 20210111 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | H | 1702 | del | 49 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | H | 1702 | T | 1 | 20210318 |
| EPI_ISL_19025011 | NSP3 | hCoV-19/Fujian/FCDC-FZCX0116/2024 | H | 1702 | Q | 239 | 20240322 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | H | 1702 | E | 2 | 20220118 |
| EPI_ISL_17708937 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200394880N2/2022 | H | 1702 | I | 6 | 20220421 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | H | 1702 | D | 19 | 20220209 |
| EPI_ISL_19791403 | NSP3 | hCoV-19/Russia/SPE-RII-MH225922S/2025 | H | 1702 | R | 332 | 20250211 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | H | 1702 | F | 6 | 20230401 |
| EPI_ISL_951067 | NSP3 | hCoV-19/England/OXON-F49752/2020 | H | 1702 | insQstop | 1 | 20201231 |
| EPI_ISL_19806787 | NSP3 | hCoV-19/Spain/CL-UCHV-49804/2024 | H | 1702 | Y | 1174 | 20241124 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | H | 1702 | M | 2 | 20220804 |
| EPI_ISL_8193896 | NSP3 | hCoV-19/Egypt/NRC-6164/2020 | H | 1702 | V | 1 | 20200701 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | F | 1703 | insstopFFDVN | 1 | 20211012 |
| EPI_ISL_12955495 | NSP3 | hCoV-19/Russia/KAM-CRIE-7730386757/2022 | F | 1703 | C | 9 | 20220209 |
| EPI_ISL_19793797 | NSP3 | hCoV-19/Canada/AB-ABPHL-131391/2025 | F | 1703 | L | 261 | 20250303 |
| EPI_ISL_951296 | NSP3 | hCoV-19/England/OXON-F50A8C/2021 | F | 1703 | K | 1 | 20210111 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | F | 1703 | T | 2 | 20211220 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | F | 1703 | insL | 1 | 20210802 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | F | 1703 | S | 6 | 20221226 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1703 | N | 1 | 20220210 |
| EPI_ISL_18442672 | NSP3 | hCoV-19/USA/NY-URMC-N8S1K641-1/2023 | F | 1703 | I | 92 | 20231011 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1703 | E | 1 | 20201214 |
| EPI_ISL_2707330 | NSP3 | hCoV-19/England/OXON-F836AA/2021 | F | 1703 | Y | 5 | 20210609 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | F | 1703 | del | 36 | 20230401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1703 | D | 1 | 20210318 |
| EPI_ISL_15658467 | NSP3 | hCoV-19/Canada/BC-BCCDC-527668/2022 | F | 1703 | V | 4 | 20220916 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | V | 1704 | insLTstopTTstop | 6 | 20220222 |
| EPI_ISL_6468503 | NSP3 | hCoV-19/Germany/NI-IOV-60336313/2021 | V | 1704 | M | 1 | 20210906 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 1704 | H | 1 | 20221226 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | V | 1704 | insstopLRQP | 1 | 20210803 |
| EPI_ISL_19484887 | NSP3 | hCoV-19/Italy/LAZ-INMI-6678/2024 | V | 1704 | A | 634 | 20240924 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | V | 1704 | stop | 1 | 20211229 |
| EPI_ISL_19722622 | NSP3 | hCoV-19/USA/MN-MDH-45897/2025 | V | 1704 | I | 1315 | 20250121 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | V | 1704 | C | 14 | 20220117 |
| EPI_ISL_17304876 | NSP3 | hCoV-19/USA/TX-HMH-M-127354/2023 | V | 1704 | L | 303 | 20230319 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | V | 1704 | Q | 1 | 20211012 |
| EPI_ISL_19741654 | NSP3 | hCoV-19/Japan/FR302-0101/2025 | V | 1704 | F | 962 | 20250121 |
| EPI_ISL_11116971 | NSP3 | hCoV-19/Denmark/DCGC-427219/2022 | V | 1704 | T | 17 | 20220310 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | V | 1704 | insLMLstopFLMVNQ | 1 | 20210919 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | V | 1704 | del | 28 | 20230401 |
| EPI_ISL_12378938 | NSP3 | hCoV-19/Canada/BC-BCCDC-380786/2022 | V | 1704 | S | 2 | 20220227 |
| EPI_ISL_10545299 | NSP3 | hCoV-19/USA/TN-ASC-210602864/2022 | V | 1704 | D | 182 | 20220120 |
| EPI_ISL_15952517 | NSP3 | hCoV-19/USA/CA-HLX-STM-ZTX7QMEJV/2022 | V | 1704 | G | 4 | 20221017 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1704 | N | 2 | 20220210 |
| EPI_ISL_8806987 | NSP3 | hCoV-19/India/GA-NCCS-3055200187049/2021 | V | 1704 | insTstopTTstop | 1 | 20211002 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | N | 1705 | L | 8 | 20211229 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1705 | C | 1 | 20210318 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | N | 1705 | del | 28 | 20230401 |
| EPI_ISL_19216710 | NSP3 | hCoV-19/England/CLIMB-CM7YKSJS/2024 | N | 1705 | T | 1981 | 20240615 |
| EPI_ISL_7551918 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082521-1102/2021 | N | 1705 | insYstopC | 1 | 20210825 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | N | 1705 | E | 8 | 20220222 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | N | 1705 | R | 2 | 20221226 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | N | 1705 | M | 7 | 20211115 |
| EPI_ISL_10459540 | NSP3 | hCoV-19/England/DHSC-CYY4FO3/2022 | N | 1705 | I | 6 | 20220208 |
| EPI_ISL_14783911 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004207048/2022 | N | 1705 | B | 7 | 20220304 |
| EPI_ISL_15403724 | NSP3 | hCoV-19/Czech Republic/77SVUPHA_3043259472/2022 | N | 1705 | H | 5 | 20220920 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | N | 1705 | stop | 13 | 20220117 |
| EPI_ISL_19068407 | NSP3 | hCoV-19/USA/CA-CDPH-500136065/2024 | N | 1705 | K | 96 | 20240318 |
| EPI_ISL_19533996 | NSP3 | hCoV-19/USA/CO-CDPHE-42384603/2024 | N | 1705 | D | 51 | 20241007 |
| EPI_ISL_14113673 | NSP3 | hCoV-19/Japan/PG-257909/2022 | N | 1705 | Y | 4 | 20220527 |
| EPI_ISL_19655287 | NSP3 | hCoV-19/Japan/FR062-0550/2024 | N | 1705 | S | 686 | 20241212 |
| EPI_ISL_7551918 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082521-1102/2021 | N | 1705 | A | 1 | 20210825 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1706 | A | 1 | 20220210 |
| EPI_ISL_19820872 | NSP3 | hCoV-19/Guatemala/018-DLNS/2025 | L | 1706 | S | 128 | 20250306 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | L | 1706 | C | 3 | 20211225 |
| EPI_ISL_17830568 | NSP3 | hCoV-19/Ukraine/79175/2023 | L | 1706 | F | 981 | 20230517 |
| EPI_ISL_16815061 | NSP3 | hCoV-19/United Arab Emirates/BTC-5821/2021 | L | 1706 | T | 3 | 20210618 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | L | 1706 | P | 1 | 20210802 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 1706 | E | 1 | 20221226 |
| EPI_ISL_19513885 | NSP3 | hCoV-19/United Kingdom/SFK-USAFSAM-S23139/2024 | L | 1706 | V | 76 | 20241001 |
| EPI_ISL_8724978 | NSP3 | hCoV-19/Colombia/VAC-UV-20030106/2021 | L | 1706 | R | 2 | 20211229 |
| EPI_ISL_19387595 | NSP3 | hCoV-19/USA/CO-CDPHE-42180012/2024 | L | 1706 | I | 26 | 20240719 |
| EPI_ISL_17708937 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200394880N2/2022 | L | 1706 | stop | 569 | 20220421 |
| EPI_ISL_17620506 | NSP3 | hCoV-19/Nepal/NPHL-S-2458/2023 | L | 1706 | del | 32 | 20230402 |
| EPI_ISL_7551918 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082521-1102/2021 | L | 1706 | Y | 1 | 20210825 |
| EPI_ISL_16981033 | NSP3 | hCoV-19/Spain/MD-HGUGM-6777992/2022 | D | 1707 | B | 12 | 20221017 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1707 | W | 1 | 20220210 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | D | 1707 | T | 6 | 20211215 |
| EPI_ISL_19427235 | NSP3 | hCoV-19/USA/NY-WMC-6123/2024 | D | 1707 | G | 65 | 20240129 |
| EPI_ISL_5004738 | NSP3 | hCoV-19/USA/IL-CDC-ASC210404923/2021 | D | 1707 | H | 5 | 20210912 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | D | 1707 | R | 12 | 20220117 |
| EPI_ISL_19736101 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147646/2025 | D | 1707 | E | 121 | 20250130 |
| EPI_ISL_18226329 | NSP3 | hCoV-19/env/India/MH-FMR_D1-52a/2023 | D | 1707 | S | 5 | 20230302 |
| EPI_ISL_19555954 | NSP3 | hCoV-19/Spain/TO-HUT-18884708/2024 | D | 1707 | N | 173 | 20240929 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | D | 1707 | F | 2 | 20210115 |
| EPI_ISL_17305632 | NSP3 | hCoV-19/USA/TX-PHH-V-073G0269/2023 | D | 1707 | A | 31 | 20230314 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | D | 1707 | K | 3 | 20211012 |
| EPI_ISL_1475588 | NSP3 | hCoV-19/England/OXON-F78F9E/2021 | D | 1707 | C | 1 | 20210223 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | D | 1707 | L | 3 | 20220804 |
| EPI_ISL_19490847 | NSP3 | hCoV-19/Canada/SK-RRPL-737182/2024 | D | 1707 | Y | 239 | 20240913 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | D | 1707 | V | 2 | 20211015 |
| EPI_ISL_17620506 | NSP3 | hCoV-19/Nepal/NPHL-S-2458/2023 | D | 1707 | del | 31 | 20230402 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | D | 1707 | I | 65 | 20220222 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | D | 1707 | Q | 2 | 20210806 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | D | 1707 | stop | 7 | 20211115 |
| EPI_ISL_19543731 | NSP3 | hCoV-19/Canada/BC-BCCDC-747302/2024 | N | 1708 | K | 257 | 20241022 |
| EPI_ISL_18503479 | NSP3 | hCoV-19/Australia/WA15602/2023 | N | 1708 | Y | 164 | 20231107 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | N | 1708 | F | 8 | 20211115 |
| EPI_ISL_18936510 | NSP3 | hCoV-19/Greece/PHLnetwork_KEDY_500/2024 | N | 1708 | T | 32 | 20240105 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | N | 1708 | P | 1 | 20210806 |
| EPI_ISL_17347909 | NSP3 | hCoV-19/Puerto Rico/RCMI-1179159/2022 | N | 1708 | B | 3 | 20221219 |
| EPI_ISL_18488495 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00012172/2023 | N | 1708 | H | 22 | 20231002 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | N | 1708 | A | 1 | 20210928 |
| EPI_ISL_922247 | NSP3 | hCoV-19/England/OXON-F5157B/2021 | N | 1708 | insstopELITLKVHCLLMLstopF | 1 | 20210106 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | N | 1708 | stop | 1 | 20211110 |
| EPI_ISL_19796000 | NSP3 | hCoV-19/Denmark/DCGC-691980/2025 | N | 1708 | G | 21 | 20250224 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | N | 1708 | insRE | 1 | 20211015 |
| EPI_ISL_19518119 | NSP3 | hCoV-19/Finland/THL-07762/2024 | N | 1708 | R | 3 | 20240906 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | N | 1708 | Q | 19 | 20220117 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | N | 1708 | L | 18 | 20230104 |
| EPI_ISL_19298926 | NSP3 | hCoV-19/Canada/BC-BCCDC-722606/2024 | N | 1708 | C | 1 | 20240713 |
| EPI_ISL_19808291 | NSP3 | hCoV-19/Canada/ON-PHL-202504621/2025 | N | 1708 | I | 36 | 20250302 |
| EPI_ISL_19184341 | NSP3 | hCoV-19/Morocco/INH_UM6P-145/2022 | N | 1708 | W | 1 | 20220209 |
| EPI_ISL_18873437 | NSP3 | hCoV-19/Finland/THL-01852/2024 | N | 1708 | D | 73 | 20240130 |
| EPI_ISL_19833200 | NSP3 | hCoV-19/Poland/Kce-46/2025 | N | 1708 | S | 402143 | 20250411 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | N | 1708 | del | 30 | 20230401 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | L | 1709 | W | 2 | 20210807 |
| EPI_ISL_10306085 | NSP3 | hCoV-19/India/KA-CBR-1402CTD005/2022 | L | 1709 | R | 2 | 20220202 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | L | 1709 | del | 31 | 20230401 |
| EPI_ISL_18145219 | NSP3 | hCoV-19/USA/CA-HLX-STM-QKCCWAD8P/2023 | L | 1709 | Q | 5 | 20230807 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | L | 1709 | insTstopTTstop | 1 | 20210802 |
| EPI_ISL_17620506 | NSP3 | hCoV-19/Nepal/NPHL-S-2458/2023 | L | 1709 | T | 1 | 20230402 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | L | 1709 | F | 4 | 20211225 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | L | 1709 | H | 4 | 20211012 |
| EPI_ISL_12934325 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011322-1545/2022 | L | 1709 | stop | 5 | 20220113 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | L | 1709 | S | 4 | 20210805 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | L | 1709 | C | 3 | 20220804 |
| EPI_ISL_1730529 | NSP3 | hCoV-19/England/OXON-F7F6A1/2021 | L | 1709 | N | 1 | 20210215 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | L | 1709 | V | 12 | 20211220 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 1709 | K | 1 | 20221226 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | L | 1709 | A | 8 | 20211228 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 1709 | I | 4 | 20230104 |
| EPI_ISL_17591968 | NSP3 | hCoV-19/Nepal/NPHL-S-2421/2023 | L | 1709 | P | 19 | 20230312 |
| EPI_ISL_19627334 | NSP3 | hCoV-19/Slovenia/1002488/2024 | L | 1709 | M | 679 | 20241112 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | R | 1710 | M | 11 | 20230401 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | R | 1710 | C | 3 | 20211225 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | R | 1710 | insstop | 4 | 20220209 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | R | 1710 | E | 21 | 20220117 |
| EPI_ISL_17620506 | NSP3 | hCoV-19/Nepal/NPHL-S-2458/2023 | R | 1710 | stop | 5 | 20230402 |
| EPI_ISL_17591968 | NSP3 | hCoV-19/Nepal/NPHL-S-2421/2023 | R | 1710 | V | 42 | 20230312 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | R | 1710 | H | 3 | 20220804 |
| EPI_ISL_18815100 | NSP3 | hCoV-19/Japan/PG-589572/2024 | R | 1710 | S | 20 | 20240105 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | R | 1710 | insRstopstopHstopRFIAYstopCYSFstopWstop | 1 | 20210805 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | R | 1710 | N | 1 | 20211220 |
| EPI_ISL_19671811 | NSP3 | hCoV-19/Spain/AN-PMC-42473/2024 | R | 1710 | K | 621 | 20241128 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | R | 1710 | Q | 1 | 20221226 |
| EPI_ISL_17714992 | NSP3 | hCoV-19/India/UP-MRU-ICMR-28/2023 | R | 1710 | T | 20 | 20230418 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | R | 1710 | D | 1 | 20210928 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | R | 1710 | del | 44 | 20230401 |
| EPI_ISL_13478242 | NSP3 | hCoV-19/Kuwait/Jaber-20195380/2022 | R | 1710 | I | 37 | 20220526 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | R | 1710 | L | 17 | 20230104 |
| EPI_ISL_18791019 | NSP3 | hCoV-19/USA/CA-SEARCH-136245/2023 | R | 1710 | G | 5 | 20230920 |
| EPI_ISL_19819740 | NSP3 | hCoV-19/Singapore/Y25R14MSC100/2025 | A | 1711 | V | 684697 | 20250402 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | A | 1711 | K | 42 | 20211228 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | A | 1711 | E | 1 | 20210802 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | A | 1711 | Q | 7 | 20211110 |
| EPI_ISL_5339867 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-50465/2021 | A | 1711 | C | 1 | 20210719 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | A | 1711 | I | 6 | 20220804 |
| EPI_ISL_16717218 | NSP3 | hCoV-19/Australia/WA10927/2023 | A | 1711 | P | 15 | 20230113 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | A | 1711 | N | 1 | 20201214 |
| EPI_ISL_19443775 | NSP3 | hCoV-19/Gansu/BYCDC140/2024 | A | 1711 | S | 660 | 20240920 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | A | 1711 | stop | 12 | 20220127 |
| EPI_ISL_13996013 | NSP3 | hCoV-19/env/USA/CA-SEARCH-90684/2022 | A | 1711 | D | 3 | 20220503 |
| EPI_ISL_17591968 | NSP3 | hCoV-19/Nepal/NPHL-S-2421/2023 | A | 1711 | R | 2 | 20230312 |
| EPI_ISL_18865665 | NSP3 | hCoV-19/USA/NY-NYCPHL-016903/2023 | A | 1711 | G | 10 | 20230207 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | A | 1711 | L | 15 | 20230104 |
| EPI_ISL_7992058 | NSP3 | hCoV-19/England/ALDP-2EDA979/2021 | A | 1711 | F | 64 | 20211214 |
| EPI_ISL_19803645 | NSP3 | hCoV-19/USA/WI-WSLH-2500854/2025 | A | 1711 | T | 1147 | 20250214 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | A | 1711 | del | 31 | 20230401 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | A | 1711 | J | 1 | 20230217 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | N | 1712 | stop | 11 | 20230217 |
| EPI_ISL_11560385 | NSP3 | hCoV-19/Netherlands/NB-RUMC-000771/2022 | N | 1712 | I | 14 | 20220321 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | N | 1712 | insQ | 10 | 20230401 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | N | 1712 | R | 42 | 20211228 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | N | 1712 | P | 3 | 20211110 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | N | 1712 | G | 4 | 20211225 |
| EPI_ISL_19702045 | NSP3 | hCoV-19/Canada/ON-PHL-202502494/2025 | N | 1712 | Y | 38 | 20250121 |
| EPI_ISL_8806987 | NSP3 | hCoV-19/India/GA-NCCS-3055200187049/2021 | N | 1712 | insCLLMLstopFLMVNQ | 2 | 20211002 |
| EPI_ISL_18210457 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA8355-P0/2023 | N | 1712 | del | 127 | 20230812 |
| EPI_ISL_951296 | NSP3 | hCoV-19/England/OXON-F50A8C/2021 | N | 1712 | F | 1 | 20210111 |
| EPI_ISL_17627219 | NSP3 | hCoV-19/Czech Republic/NRL-s1933/2023 | N | 1712 | D | 25 | 20230418 |
| EPI_ISL_19637591 | NSP3 | hCoV-19/Russia/YAN-RII-MH214113S/2024 | N | 1712 | S | 493 | 20241112 |
| EPI_ISL_17591968 | NSP3 | hCoV-19/Nepal/NPHL-S-2421/2023 | N | 1712 | A | 2 | 20230312 |
| EPI_ISL_19101540 | NSP3 | hCoV-19/Brazil/AC-013997-IEC/2024 | N | 1712 | T | 206 | 20240321 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | N | 1712 | K | 7 | 20230217 |
| EPI_ISL_1730529 | NSP3 | hCoV-19/England/OXON-F7F6A1/2021 | N | 1712 | Q | 1 | 20210215 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | N | 1712 | H | 18 | 20220222 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1712 | L | 3 | 20220210 |
| EPI_ISL_18440031 | NSP3 | hCoV-19/Wales/CLIMB-CM7YFBCK/2023 | N | 1712 | B | 5 | 20231008 |
| EPI_ISL_19622976 | NSP3 | hCoV-19/New Zealand/24YA7654/2024 | N | 1713 | D | 35 | 20241129 |
| EPI_ISL_15637184 | NSP3 | hCoV-19/Germany/NI-IOV-1252233/2022 | N | 1713 | V | 3 | 20220810 |
| EPI_ISL_17781987 | NSP3 | hCoV-19/Germany/SH-ChVir43069/2023 | N | 1713 | K | 9 | 20230403 |
| EPI_ISL_7314064 | NSP3 | hCoV-19/USA/ID-IBL-770221/2021 | N | 1713 | E | 1 | 20211110 |
| EPI_ISL_12124180 | NSP3 | hCoV-19/Scotland/QEUH-3D4A0C8/2022 | N | 1713 | H | 5 | 20220411 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | N | 1713 | stop | 18 | 20230217 |
| EPI_ISL_1730529 | NSP3 | hCoV-19/England/OXON-F7F6A1/2021 | N | 1713 | insQRLF | 1 | 20210215 |
| EPI_ISL_18233385 | NSP3 | hCoV-19/Japan/PG-560684/2023 | N | 1713 | I | 6 | 20230814 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1713 | G | 2 | 20220210 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | N | 1713 | R | 1 | 20230217 |
| EPI_ISL_18392534 | NSP3 | hCoV-19/England/CLIMB-CM7Y8OKW/2023 | N | 1713 | B | 5 | 20231005 |
| EPI_ISL_14165729 | NSP3 | hCoV-19/England/LSPA-3F01B24/2022 | N | 1713 | Y | 17 | 20220722 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | N | 1713 | C | 5 | 20220222 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | N | 1713 | insRLF | 4 | 20211012 |
| EPI_ISL_5934824 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689492_CAM_IZSM_COLLI_TIGEM/2021 | N | 1713 | Q | 6 | 20211015 |
| EPI_ISL_19461501 | NSP3 | hCoV-19/Canada/BC-BCCDC-735124/2024 | N | 1713 | del | 63 | 20240913 |
| EPI_ISL_19829193 | NSP3 | hCoV-19/USA/NY-CDC-LC1136571/2025 | N | 1713 | S | 3050 | 20250403 |
| EPI_ISL_17621523 | NSP3 | hCoV-19/USA/NV-CDC-QDX49499981/2023 | N | 1713 | T | 49 | 20230424 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | N | 1713 | L | 44 | 20220804 |
| EPI_ISL_15637184 | NSP3 | hCoV-19/Germany/NI-IOV-1252233/2022 | T | 1714 | L | 18 | 20220810 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | T | 1714 | D | 1 | 20211220 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | T | 1714 | insPK | 1 | 20210802 |
| EPI_ISL_17744298 | NSP3 | hCoV-19/USA/MO-20MU9599NPS/2021 | T | 1714 | G | 1 | 20210813 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | T | 1714 | H | 9 | 20230217 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | T | 1714 | M | 41 | 20211228 |
| EPI_ISL_18290438 | NSP3 | hCoV-19/Canary Islands/CHUIMI-021439901764/2023 | T | 1714 | P | 50 | 20230907 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | T | 1714 | E | 7 | 20220209 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | T | 1714 | K | 1 | 20211229 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | T | 1714 | stop | 13 | 20220127 |
| EPI_ISL_19461501 | NSP3 | hCoV-19/Canada/BC-BCCDC-735124/2024 | T | 1714 | del | 74 | 20240913 |
| EPI_ISL_12753050 | NSP3 | hCoV-19/Russia/KIR-CRIE-7726742754/2022 | T | 1714 | S | 8 | 20220203 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | T | 1714 | V | 20 | 20230401 |
| EPI_ISL_1475588 | NSP3 | hCoV-19/England/OXON-F78F9E/2021 | T | 1714 | C | 1 | 20210223 |
| EPI_ISL_19824241 | NSP3 | hCoV-19/USA/IL-RIPHL_124014_G/2025 | T | 1714 | I | 2514 | 20250315 |
| EPI_ISL_19789143 | NSP3 | hCoV-19/Greece/PHLnetwork_6215/2024 | T | 1714 | N | 134 | 20241111 |
| EPI_ISL_17275347 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45873/2023 | T | 1714 | Q | 1 | 20230217 |
| EPI_ISL_19739602 | NSP3 | hCoV-19/USA/NJ-CDC-LC1131640/2025 | T | 1714 | A | 211 | 20250206 |
| EPI_ISL_19807461 | NSP3 | hCoV-19/Canada/ON-PHL-202504014/2025 | K | 1715 | R | 3565 | 20250211 |
| EPI_ISL_18529295 | NSP3 | hCoV-19/USA/FL-CDC-LC1069530/2023 | K | 1715 | N | 20 | 20231110 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | K | 1715 | P | 1 | 20210928 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | K | 1715 | A | 2 | 20210525 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | K | 1715 | del | 35 | 20230401 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | K | 1715 | L | 5 | 20220209 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | K | 1715 | stop | 17 | 20230217 |
| EPI_ISL_10397224 | NSP3 | hCoV-19/Turkey/HSGM-G1584/2022 | K | 1715 | E | 14 | 20220214 |
| EPI_ISL_5934824 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689492_CAM_IZSM_COLLI_TIGEM/2021 | K | 1715 | S | 3 | 20211015 |
| EPI_ISL_12670134 | NSP3 | hCoV-19/Germany/HH-RKI-I-779751/2022 | K | 1715 | G | 9 | 20220427 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1715 | V | 5 | 20220210 |
| EPI_ISL_17275297 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45822/2023 | K | 1715 | Q | 3 | 20230217 |
| EPI_ISL_12087758 | NSP3 | hCoV-19/India/TN-INSACOG-CSIR-NEERI1440/2022 | K | 1715 | I | 5 | 20220308 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | K | 1715 | M | 2 | 20210115 |
| EPI_ISL_8812967 | NSP3 | hCoV-19/USA/OR-TRACE-POLK-042521-1190/2021 | K | 1715 | insLIYstop | 1 | 20210425 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | K | 1715 | F | 2 | 20211225 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 1715 | T | 9 | 20230104 |
| EPI_ISL_19833127 | NSP3 | hCoV-19/France/BFC-RELAB-IPP03818/2025 | G | 1716 | C | 1218 | 20250314 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | G | 1716 | stop | 4 | 20230104 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1716 | F | 1 | 20210318 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | G | 1716 | K | 2 | 20220804 |
| EPI_ISL_19499729 | NSP3 | hCoV-19/USA/TX-HMH-M-146167/2024 | G | 1716 | D | 64 | 20240904 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | G | 1716 | N | 17 | 20230401 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | G | 1716 | H | 1 | 20211229 |
| EPI_ISL_19412708 | NSP3 | hCoV-19/Spain/PV-HUD-96019214/2024 | G | 1716 | V | 395 | 20240907 |
| EPI_ISL_951261 | NSP3 | hCoV-19/England/OXON-F4FBBA/2021 | G | 1716 | E | 1 | 20210110 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | G | 1716 | del | 35 | 20230401 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | G | 1716 | P | 1 | 20201214 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | G | 1716 | insYCLLMLstop | 1 | 20210114 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1716 | Q | 2 | 20220210 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | G | 1716 | insI | 10 | 20220127 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | G | 1716 | R | 26 | 20230217 |
| EPI_ISL_13338677 | NSP3 | hCoV-19/England/QEUH-3E51555/2022 | G | 1716 | L | 11 | 20220609 |
| EPI_ISL_16043520 | NSP3 | hCoV-19/Germany/SN-RKI-I-1044587/2022 | G | 1716 | A | 8 | 20221129 |
| EPI_ISL_19768146 | NSP3 | hCoV-19/USA/TX-USAFSAM-S23386/2024 | G | 1716 | S | 1071 | 20241210 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | G | 1716 | I | 7 | 20220209 |
| EPI_ISL_1928466 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSAGOG-GSEQ-2343/2021 | G | 1716 | T | 1 | 20210329 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | S | 1717 | del | 34 | 20230401 |
| EPI_ISL_14747411 | NSP3 | hCoV-19/Spain/CL-COV35937/2022 | S | 1717 | P | 28 | 20220809 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | S | 1717 | I | 42 | 20211228 |
| EPI_ISL_19605183 | NSP3 | hCoV-19/Belgium/Sciensano-LS-S8403/2024 | S | 1717 | A | 65 | 20241112 |
| EPI_ISL_18002106 | NSP3 | hCoV-19/Cameroon/LNSP-004-190625/2022 | S | 1717 | stop | 9 | 20220701 |
| EPI_ISL_19833052 | NSP3 | hCoV-19/France/ARA-HCL025058908801/2025 | S | 1717 | L | 22440 | 20250409 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | S | 1717 | V | 1 | 20210525 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 1717 | D | 1 | 20221226 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | S | 1717 | R | 1 | 20211220 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | S | 1717 | C | 10 | 20211229 |
| EPI_ISL_11950238 | NSP3 | hCoV-19/England/DHSC-CYYAIXO/2022 | S | 1717 | K | 16 | 20220225 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | S | 1717 | F | 10 | 20230217 |
| EPI_ISL_5934824 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689492_CAM_IZSM_COLLI_TIGEM/2021 | S | 1717 | Q | 2 | 20211015 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | S | 1717 | E | 2 | 20230104 |
| EPI_ISL_18736909 | NSP3 | hCoV-19/Russia/SAM-RII-MH155490S/2023 | S | 1717 | T | 30 | 20231109 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | S | 1717 | H | 25 | 20230401 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | S | 1717 | N | 1 | 20211006 |
| EPI_ISL_4729360 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_LYSVMVR4Z4CZIY5T/2021 | S | 1717 | insYIG | 3 | 20210921 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | S | 1717 | W | 1 | 20211220 |
| EPI_ISL_19464582 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55189/2024 | L | 1718 | F | 514 | 20240921 |
| EPI_ISL_5339867 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-50465/2021 | L | 1718 | R | 4 | 20210719 |
| EPI_ISL_11950238 | NSP3 | hCoV-19/England/DHSC-CYYAIXO/2022 | L | 1718 | D | 14 | 20220225 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1718 | T | 1 | 20201214 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | L | 1718 | C | 11 | 20220118 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | L | 1718 | A | 7 | 20211228 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 1718 | K | 1 | 20221226 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | L | 1718 | del | 28 | 20230401 |
| EPI_ISL_18746766 | NSP3 | hCoV-19/Ukraine/80423/2023 | L | 1718 | I | 9 | 20230916 |
| EPI_ISL_17171976 | NSP3 | hCoV-19/South Korea/KDCA218210/2023 | L | 1718 | W | 12 | 20230216 |
| EPI_ISL_19554961 | NSP3 | hCoV-19/Sweden/N-2A900580521/2024 | L | 1718 | M | 83 | 20241015 |
| EPI_ISL_19588944 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55673/2024 | L | 1718 | V | 147 | 20241121 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1718 | G | 1 | 20210318 |
| EPI_ISL_17013122 | NSP3 | hCoV-19/USA/IL-2162023181/2023 | L | 1718 | S | 9 | 20230209 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 1718 | E | 1 | 20211006 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1718 | Y | 1 | 20220210 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | P | 1719 | M | 6 | 20221226 |
| EPI_ISL_18546878 | NSP3 | hCoV-19/USA/TX-HMH-M-135459/2023 | P | 1719 | T | 59 | 20231109 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | P | 1719 | del | 32 | 20230401 |
| EPI_ISL_8812984 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1238/2021 | P | 1719 | C | 7 | 20211104 |
| EPI_ISL_19784077 | NSP3 | hCoV-19/USA/NJ-CDC-LC1135003/2025 | P | 1719 | S | 1564 | 20250305 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1719 | K | 19 | 20220210 |
| EPI_ISL_11336333 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0529/2021 | P | 1719 | V | 4 | 20211220 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | P | 1719 | Q | 12 | 20230401 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | P | 1719 | stop | 1 | 20211115 |
| EPI_ISL_19237120 | NSP3 | hCoV-19/Spain/AR-IACS_LaSARD-00567988/2021 | P | 1719 | R | 3 | 20210716 |
| EPI_ISL_19188802 | NSP3 | hCoV-19/USA/TX-HMH-M-141256/2024 | P | 1719 | A | 12 | 20240601 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | P | 1719 | insXXstopWstop | 1 | 20210806 |
| EPI_ISL_19754489 | NSP3 | hCoV-19/USA/NE-RP251627/2025 | P | 1719 | H | 340 | 20250222 |
| EPI_ISL_11336290 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0476/2021 | P | 1719 | I | 2 | 20211218 |
| EPI_ISL_19640119 | NSP3 | hCoV-19/USA/CA-CDPH-6000021391/2024 | P | 1719 | L | 618 | 20241125 |
| EPI_ISL_6475749 | NSP3 | hCoV-19/USA/GA-CDC-STM-000722832/2021 | P | 1719 | insTLS | 1 | 20210817 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | P | 1719 | E | 8 | 20211228 |
| EPI_ISL_14583724 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS.22.16386/2022 | I | 1720 | N | 2 | 20220726 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | I | 1720 | E | 1 | 20220126 |
| EPI_ISL_17521249 | NSP3 | hCoV-19/Belgium/Briant-12305596701/2023 | I | 1720 | S | 31 | 20230411 |
| EPI_ISL_3759988 | NSP3 | hCoV-19/USA/ID-IBL-747478/2021 | I | 1720 | stop | 2 | 20210809 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | I | 1720 | Y | 7 | 20230217 |
| EPI_ISL_17711223 | NSP3 | hCoV-19/India/UP-MRU-ICMR-57/2023 | I | 1720 | M | 3 | 20230420 |
| EPI_ISL_17020822 | NSP3 | hCoV-19/Chile/RM-198017/2021 | I | 1720 | insARDLSXXXXXXXXX | 1 | 20211225 |
| EPI_ISL_6400924 | NSP3 | hCoV-19/USA/NJ-CDC-IBX998997051453/2021 | I | 1720 | F | 2 | 20211102 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1720 | W | 2 | 20220210 |
| EPI_ISL_11484806 | NSP3 | hCoV-19/England/PHEC-YYDXSOE/2022 | I | 1720 | J | 1 | 20220313 |
| EPI_ISL_11950238 | NSP3 | hCoV-19/England/DHSC-CYYAIXO/2022 | I | 1720 | A | 14 | 20220225 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | I | 1720 | H | 2 | 20210813 |
| EPI_ISL_19227108 | NSP3 | hCoV-19/Singapore/R34MQ126/2024 | I | 1720 | T | 150 | 20240603 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | I | 1720 | Q | 2 | 20210928 |
| EPI_ISL_18746766 | NSP3 | hCoV-19/Ukraine/80423/2023 | I | 1720 | L | 80 | 20230916 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | I | 1720 | del | 39 | 20230401 |
| EPI_ISL_19640049 | NSP3 | hCoV-19/USA/CA-SCPHL-24WGS01026/2024 | I | 1720 | V | 1021 | 20241218 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | N | 1721 | F | 1 | 20210428 |
| EPI_ISL_18226116 | NSP3 | hCoV-19/USA/MD-CDC-LC1053773/2023 | N | 1721 | B | 15 | 20230823 |
| EPI_ISL_8812984 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110421-1238/2021 | N | 1721 | L | 11 | 20211104 |
| EPI_ISL_8194882 | NSP3 | hCoV-19/Egypt/NRC-6352/2020 | N | 1721 | Q | 1 | 20200726 |
| EPI_ISL_17385439 | NSP3 | hCoV-19/Canada/ON-PHL-23-19210/2023 | N | 1721 | G | 22 | 20230327 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | N | 1721 | A | 7 | 20211228 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | N | 1721 | stop | 12 | 20230217 |
| EPI_ISL_7493995 | NSP3 | hCoV-19/USA/CA-TRACE-SANB-072121-979/2021 | N | 1721 | insLstopFL | 1 | 20210721 |
| EPI_ISL_19603206 | NSP3 | hCoV-19/Chile/MA-93388/2024 | N | 1721 | D | 414 | 20241122 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | N | 1721 | R | 4 | 20221226 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | N | 1721 | M | 8 | 20220118 |
| EPI_ISL_9205965 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-76765/2022 | N | 1721 | I | 41 | 20220105 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | N | 1721 | del | 25 | 20230401 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | N | 1721 | V | 1 | 20220804 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | N | 1721 | H | 19 | 20220209 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | N | 1721 | K | 7 | 20220814 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | N | 1721 | E | 3 | 20220126 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | N | 1721 | T | 5 | 20230217 |
| EPI_ISL_12955392 | NSP3 | hCoV-19/Russia/LIP-CRIE-7730694339/2022 | N | 1721 | Y | 2 | 20220215 |
| EPI_ISL_19831647 | NSP3 | hCoV-19/Luxembourg/LNS8838316/2025 | N | 1721 | S | 2111 | 20250303 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | V | 1722 | Y | 1 | 20210928 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 1722 | K | 3 | 20221226 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | V | 1722 | L | 62 | 20230217 |
| EPI_ISL_15047930 | NSP3 | hCoV-19/USA/NY-MSK-6618/2022 | V | 1722 | G | 3 | 20220803 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | V | 1722 | C | 44 | 20230217 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | V | 1722 | P | 1 | 20210812 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | V | 1722 | del | 26 | 20230401 |
| EPI_ISL_19356902 | NSP3 | hCoV-19/USA/NY-URMC-O8S1Q248-1/2024 | V | 1722 | I | 584 | 20240805 |
| EPI_ISL_14583719 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS.22.16374/2022 | V | 1722 | F | 13 | 20220724 |
| EPI_ISL_19199698 | NSP3 | hCoV-19/Brazil/ES-LACENES-321590858/2024 | V | 1722 | T | 1 | 20240408 |
| EPI_ISL_19175543 | NSP3 | hCoV-19/Italy/VEN-IZSVe-24RS8028-3_TV/2024 | V | 1722 | A | 96 | 20240512 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | V | 1722 | S | 1 | 20220811 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | V | 1722 | M | 9 | 20211231 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | V | 1722 | R | 2 | 20210806 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | V | 1722 | Q | 15 | 20230401 |
| EPI_ISL_12320511 | NSP3 | hCoV-19/Turkey/HSGM-GS2170/2022 | V | 1722 | D | 1 | 20220401 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | V | 1722 | H | 1 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1723 | P | 1 | 20210318 |
| EPI_ISL_12934364 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-011822-1584/2022 | I | 1723 | stop | 8 | 20220118 |
| EPI_ISL_19822843 | NSP3 | hCoV-19/Denmark/DCGC-692114/2025 | I | 1723 | V | 3291 | 20250310 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | I | 1723 | S | 1 | 20211015 |
| EPI_ISL_19642985 | NSP3 | hCoV-19/Thailand/NIC_BKK_2003/2024 | I | 1723 | L | 89 | 20241118 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | I | 1723 | insTstopTTstopE | 2 | 20211228 |
| EPI_ISL_11930033 | NSP3 | hCoV-19/England/DHSC-CYBJ95M/2022 | I | 1723 | insSQTALE | 1 | 20220202 |
| EPI_ISL_18656405 | NSP3 | hCoV-19/USA/CO-CDPHE-41431375/2023 | I | 1723 | T | 13 | 20231011 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | I | 1723 | del | 29 | 20230401 |
| EPI_ISL_19314914 | NSP3 | hCoV-19/USA/DE-DHSS-136/2024 | I | 1723 | M | 277 | 20240703 |
| EPI_ISL_3299584 | NSP3 | hCoV-19/Sweden/UUH-000199777591N2/2021 | I | 1723 | F | 2 | 20210428 |
| EPI_ISL_8954264 | NSP3 | hCoV-19/USA/WI-CDC-2-5388861/2021 | I | 1723 | J | 2 | 20211227 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | I | 1723 | N | 1 | 20210114 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | I | 1723 | Y | 27 | 20230217 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | I | 1723 | R | 17 | 20230401 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | I | 1723 | K | 11 | 20220814 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | V | 1724 | insstopTTstopDstopstopHstopR | 36 | 20210419 |
| EPI_ISL_13857951 | NSP3 | hCoV-19/India/GJ-ICMR-MCL-21-1048-3729-P1/2021 | V | 1724 | insMLstop | 1 | 20210219 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | V | 1724 | insIQA | 1 | 20210809 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | V | 1724 | C | 7 | 20221226 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | V | 1724 | stop | 7 | 20211231 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | V | 1724 | del | 31 | 20230401 |
| EPI_ISL_19494755 | NSP3 | hCoV-19/Canada/ON-PHL-202417297/2024 | V | 1724 | F | 25 | 20241009 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | V | 1724 | T | 38 | 20210419 |
| EPI_ISL_7493995 | NSP3 | hCoV-19/USA/CA-TRACE-SANB-072121-979/2021 | V | 1724 | N | 1 | 20210721 |
| EPI_ISL_14583724 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS.22.16386/2022 | V | 1724 | G | 9 | 20220726 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | V | 1724 | E | 1 | 20220811 |
| EPI_ISL_17275340 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45865/2023 | V | 1724 | M | 13 | 20230217 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | V | 1724 | L | 144 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1724 | H | 2 | 20220210 |
| EPI_ISL_19677611 | NSP3 | hCoV-19/Argentina/INEI127311/2024 | V | 1724 | I | 359 | 20241213 |
| EPI_ISL_8193896 | NSP3 | hCoV-19/Egypt/NRC-6164/2020 | V | 1724 | W | 1 | 20200701 |
| EPI_ISL_1928466 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSAGOG-GSEQ-2343/2021 | V | 1724 | P | 1 | 20210329 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | V | 1724 | S | 21 | 20230217 |
| EPI_ISL_19770225 | NSP3 | hCoV-19/England/CLIMB-CM7YE6E8/2025 | V | 1724 | A | 62 | 20250216 |
| EPI_ISL_12934421 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-012722-1641/2022 | V | 1724 | insMLstopF | 12 | 20220127 |
| EPI_ISL_16201329 | NSP3 | hCoV-19/Kuwait/batch2-Sample66/2022 | V | 1724 | D | 4 | 20220912 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | F | 1725 | insK | 1 | 20210525 |
| EPI_ISL_7493995 | NSP3 | hCoV-19/USA/CA-TRACE-SANB-072121-979/2021 | F | 1725 | Q | 1 | 20210721 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1725 | N | 1 | 20220210 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | F | 1725 | del | 38 | 20230401 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | F | 1725 | A | 2 | 20211006 |
| EPI_ISL_19074588 | NSP3 | hCoV-19/Taiwan/CDC-F92422/2024 | F | 1725 | L | 148 | 20240422 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | F | 1725 | insW | 1 | 20210813 |
| EPI_ISL_11930033 | NSP3 | hCoV-19/England/DHSC-CYBJ95M/2022 | F | 1725 | H | 1 | 20220202 |
| EPI_ISL_8193896 | NSP3 | hCoV-19/Egypt/NRC-6164/2020 | F | 1725 | insV | 1 | 20200701 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | F | 1725 | K | 1 | 20220126 |
| EPI_ISL_17705343 | NSP3 | hCoV-19/Puerto Rico/PR-I84289/2023 | F | 1725 | Y | 12 | 20230412 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | F | 1725 | V | 5 | 20220222 |
| EPI_ISL_14584701 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16474/2022 | F | 1725 | S | 30 | 20220801 |
| EPI_ISL_15781119 | NSP3 | hCoV-19/Togo/NMIMR-TGS-324-22/2022 | F | 1725 | I | 3 | 20220517 |
| EPI_ISL_15292694 | NSP3 | hCoV-19/India/GA-NCCS-563073855/2021 | F | 1725 | insMVNQ | 3 | 20211105 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | F | 1725 | insLstopCstopWstopIKV | 1 | 20210815 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | F | 1725 | C | 13 | 20220811 |
| EPI_ISL_1051606 | NSP3 | hCoV-19/England/OXON-F5E408/2021 | F | 1725 | stop | 1 | 20210123 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | F | 1725 | M | 5 | 20221226 |
| EPI_ISL_19071003 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6672/2024 | D | 1726 | E | 23 | 20240321 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | D | 1726 | K | 4 | 20220811 |
| EPI_ISL_18613038 | NSP3 | hCoV-19/Italy/VEN-IZSVe-23RS8245-10_VI/2023 | D | 1726 | A | 30 | 20231202 |
| EPI_ISL_19429299 | NSP3 | hCoV-19/Hubei/HCDC-WH7022/2024 | D | 1726 | N | 133 | 20240813 |
| EPI_ISL_5372419 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-60611/2021 | D | 1726 | C | 1 | 20210831 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | D | 1726 | S | 1 | 20210806 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | D | 1726 | stop | 30 | 20230217 |
| EPI_ISL_3299584 | NSP3 | hCoV-19/Sweden/UUH-000199777591N2/2021 | D | 1726 | R | 2 | 20210428 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | D | 1726 | M | 6 | 20220103 |
| EPI_ISL_14818782 | NSP3 | hCoV-19/Spain/NC-CHN-01008220/2022 | D | 1726 | Y | 13 | 20220726 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | D | 1726 | Q | 2 | 20230217 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | D | 1726 | L | 14 | 20230401 |
| EPI_ISL_9429951 | NSP3 | hCoV-19/India/KA-CBR-SEQ-10967/2021 | D | 1726 | H | 5 | 20211223 |
| EPI_ISL_18648319 | NSP3 | hCoV-19/Brazil/RJ-FIOCRUZ-13043/2023 | D | 1726 | G | 33 | 20231114 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | D | 1726 | del | 39 | 20230401 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | D | 1726 | T | 19 | 20230401 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | D | 1726 | W | 1 | 20201214 |
| EPI_ISL_12999234 | NSP3 | hCoV-19/Russia/LIP-CRIE-7730694872/2022 | D | 1726 | V | 12 | 20220215 |
| EPI_ISL_18611701 | NSP3 | hCoV-19/Singapore/R88MR106/2023 | D | 1726 | B | 130 | 20231127 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | D | 1726 | I | 36 | 20211220 |
| EPI_ISL_13342083 | NSP3 | hCoV-19/India/TN-CDFD-J-17/2022 | G | 1727 | R | 5 | 20220601 |
| EPI_ISL_14584693 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16378/2022 | G | 1727 | E | 1 | 20220725 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | G | 1727 | del | 43 | 20230401 |
| EPI_ISL_19802023 | NSP3 | hCoV-19/USA/IL-RIPHL_81630_G/2025 | G | 1727 | S | 187 | 20250227 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | G | 1727 | P | 1 | 20210801 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | G | 1727 | insNQNV | 1 | 20210802 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | G | 1727 | L | 5 | 20211228 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | G | 1727 | insstop | 9 | 20211227 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | G | 1727 | M | 9 | 20230401 |
| EPI_ISL_11930033 | NSP3 | hCoV-19/England/DHSC-CYBJ95M/2022 | G | 1727 | insWQVHCLLMLstopFLMVNQNV | 1 | 20220202 |
| EPI_ISL_1928466 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSAGOG-GSEQ-2343/2021 | G | 1727 | N | 1 | 20210329 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | G | 1727 | I | 4 | 20211012 |
| EPI_ISL_3792488 | NSP3 | hCoV-19/Sweden/2A377179521/2021 | G | 1727 | insYstopCYSFstopWstopIKMstop | 36 | 20210419 |
| EPI_ISL_19518309 | NSP3 | hCoV-19/USA/MN-MDH-43734/2024 | G | 1727 | V | 178 | 20240906 |
| EPI_ISL_15269683 | NSP3 | hCoV-19/Austria/Medilab_1305/2022 | G | 1727 | D | 38 | 20220930 |
| EPI_ISL_11930033 | NSP3 | hCoV-19/England/DHSC-CYBJ95M/2022 | G | 1727 | K | 2 | 20220202 |
| EPI_ISL_19784811 | NSP3 | hCoV-19/Spain/CT-HUGTiP-B1R206/2025 | G | 1727 | C | 51 | 20250305 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | G | 1727 | W | 27 | 20230217 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | G | 1727 | stop | 3 | 20230217 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | G | 1727 | T | 17 | 20230401 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | G | 1727 | A | 42 | 20220814 |
| EPI_ISL_8194883 | NSP3 | hCoV-19/Egypt/NRC-6353/2020 | G | 1727 | F | 1 | 20200726 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | G | 1727 | Q | 6 | 20221226 |
| EPI_ISL_3759988 | NSP3 | hCoV-19/USA/ID-IBL-747478/2021 | K | 1728 | Y | 2 | 20210809 |
| EPI_ISL_10980340 | NSP3 | hCoV-19/Nigeria/NCDC-NR-GL-001560/2021 | K | 1728 | insXXXXXXXXX | 1 | 20211218 |
| EPI_ISL_3299584 | NSP3 | hCoV-19/Sweden/UUH-000199777591N2/2021 | K | 1728 | A | 2 | 20210428 |
| EPI_ISL_19643660 | NSP3 | hCoV-19/USA/TX-HMH-M-146847/2024 | K | 1728 | N | 42 | 20241029 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | K | 1728 | M | 1 | 20210806 |
| EPI_ISL_19231982 | NSP3 | hCoV-19/Russia/KLU-RII-MH191418S/2024 | K | 1728 | R | 237 | 20240503 |
| EPI_ISL_11887232 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0529/2021 | K | 1728 | L | 4 | 20211220 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | K | 1728 | stop | 19 | 20230217 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | K | 1728 | H | 1 | 20220814 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | K | 1728 | del | 38 | 20230401 |
| EPI_ISL_17041186 | NSP3 | hCoV-19/Japan/PG-452858/2023 | K | 1728 | T | 9 | 20230210 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | K | 1728 | F | 2 | 20220209 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | K | 1728 | S | 3 | 20221226 |
| EPI_ISL_10347719 | NSP3 | hCoV-19/South Korea/KDCA29477/2022 | K | 1728 | I | 11 | 20220131 |
| EPI_ISL_17394432 | NSP3 | hCoV-19/Netherlands/NH-RIVM-128576/2023 | K | 1728 | E | 24 | 20230318 |
| EPI_ISL_17021247 | NSP3 | hCoV-19/Chile/RM-199373/2021 | K | 1728 | Q | 10 | 20211227 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | K | 1728 | V | 26 | 20230401 |
| EPI_ISL_19751910 | NSP3 | hCoV-19/Denmark/DCGC-691845/2025 | S | 1729 | L | 1197 | 20250210 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | S | 1729 | R | 1 | 20210812 |
| EPI_ISL_10828222 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-88512/2022 | S | 1729 | K | 6 | 20220202 |
| EPI_ISL_19764446 | NSP3 | hCoV-19/Spain/AS-HUCA-232515734/2025 | S | 1729 | stop | 11 | 20250221 |
| EPI_ISL_3759988 | NSP3 | hCoV-19/USA/ID-IBL-747478/2021 | S | 1729 | insFstopWstopIKMstopRI | 1 | 20210809 |
| EPI_ISL_8813043 | NSP3 | hCoV-19/USA/OR-TRACE-MULT-032721-1187/2021 | S | 1729 | insstopRI | 2 | 20210327 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | S | 1729 | G | 2 | 20220811 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | S | 1729 | insFFstopWstopI | 1 | 20210804 |
| EPI_ISL_16102693 | NSP3 | hCoV-19/env/USA/CA-SEARCH-209193/2022 | S | 1729 | T | 6 | 20220925 |
| EPI_ISL_12094868 | NSP3 | hCoV-19/Israel/CVL-8011349/2022 | S | 1729 | P | 5 | 20220310 |
| EPI_ISL_19564265 | NSP3 | hCoV-19/Australia/QLD0x014DAB/2024 | S | 1729 | A | 45 | 20241101 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | S | 1729 | M | 4 | 20230217 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | S | 1729 | F | 1 | 20220814 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | S | 1729 | H | 3 | 20211012 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | S | 1729 | E | 3 | 20211015 |
| EPI_ISL_19643660 | NSP3 | hCoV-19/USA/TX-HMH-M-146847/2024 | S | 1729 | Q | 9 | 20241029 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | S | 1729 | V | 10 | 20230104 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | S | 1729 | del | 34 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 1729 | Y | 1 | 20221226 |
| EPI_ISL_18226321 | NSP3 | hCoV-19/env/India/MH-FMR_B6-55a/2023 | S | 1729 | I | 61 | 20230315 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1729 | N | 20 | 20230401 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | K | 1730 | D | 3 | 20220811 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | K | 1730 | E | 1 | 20210806 |
| EPI_ISL_10742998 | NSP3 | hCoV-19/England/DHSC-CYBQCKZ/2022 | K | 1730 | insII | 1 | 20220220 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | K | 1730 | Y | 2 | 20221226 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | K | 1730 | del | 31 | 20230401 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | K | 1730 | stop | 5 | 20220812 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | K | 1730 | T | 5 | 20210115 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | K | 1730 | M | 10 | 20220209 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | K | 1730 | V | 4 | 20230217 |
| EPI_ISL_11355411 | NSP3 | hCoV-19/France/GES-ChNa-210059746501/2021 | K | 1730 | insGRXI | 1 | 20210716 |
| EPI_ISL_11355258 | NSP3 | hCoV-19/France/GES-ChNa-210064525801/2021 | K | 1730 | insGRII | 1 | 20210808 |
| EPI_ISL_19068091 | NSP3 | hCoV-19/USA/CA-CDPH-500135722/2024 | K | 1730 | R | 16 | 20240305 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | K | 1730 | I | 41 | 20220126 |
| EPI_ISL_14584693 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16378/2022 | K | 1730 | insstopRII | 11 | 20220725 |
| EPI_ISL_19643660 | NSP3 | hCoV-19/USA/TX-HMH-M-146847/2024 | K | 1730 | N | 17 | 20241029 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | K | 1730 | insVKII | 2 | 20211103 |
| EPI_ISL_16737292 | NSP3 | hCoV-19/England/PLYM-326A75FE/2023 | K | 1730 | insMstopRII | 15 | 20230117 |
| EPI_ISL_5934822 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702689842_CAM_IZSM_COLLI_TIGEM/2021 | K | 1730 | S | 2 | 20211015 |
| EPI_ISL_5437223 | NSP3 | hCoV-19/Sweden/UUH-000200001892/2021 | K | 1730 | insXX | 1 | 20210506 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | K | 1730 | L | 15 | 20230401 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | K | 1730 | Q | 15 | 20230401 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | K | 1730 | P | 2 | 20210801 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | K | 1730 | insPVPY | 1 | 20210525 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | K | 1730 | H | 11 | 20230104 |
| EPI_ISL_11930033 | NSP3 | hCoV-19/England/DHSC-CYBJ95M/2022 | C | 1731 | L | 13 | 20220202 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | C | 1731 | A | 2 | 20210115 |
| EPI_ISL_3922840 | NSP3 | hCoV-19/USA/ID-IBL-639579/2020 | C | 1731 | insstopRIIY | 1 | 20200805 |
| EPI_ISL_15665818 | NSP3 | hCoV-19/USA/CA-CDPH-FS48075580/2022 | C | 1731 | G | 8 | 20221007 |
| EPI_ISL_15089536 | NSP3 | hCoV-19/USA/TX-HMH-M-115407/2022 | C | 1731 | I | 8 | 20220909 |
| EPI_ISL_18987872 | NSP3 | hCoV-19/env/Germany/BY-LGL-6154176/2024 | C | 1731 | W | 11 | 20240214 |
| EPI_ISL_10858494 | NSP3 | hCoV-19/Turkey/HSGM-G2355/2022 | C | 1731 | R | 4 | 20220217 |
| EPI_ISL_11934719 | NSP3 | hCoV-19/England/DHSC-CYD41Z5/2022 | C | 1731 | S | 5 | 20220206 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | C | 1731 | insLLMLstopFLMV | 1 | 20211228 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | C | 1731 | Q | 1 | 20210812 |
| EPI_ISL_8806987 | NSP3 | hCoV-19/India/GA-NCCS-3055200187049/2021 | C | 1731 | insVNLYCYstopI | 1 | 20211002 |
| EPI_ISL_18927994 | NSP3 | hCoV-19/USA/TX-HMH-M-138766/2024 | C | 1731 | Y | 63 | 20240131 |
| EPI_ISL_11336290 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0476/2021 | C | 1731 | H | 1 | 20211218 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | C | 1731 | insstop | 1 | 20210801 |
| EPI_ISL_3299584 | NSP3 | hCoV-19/Sweden/UUH-000199777591N2/2021 | C | 1731 | K | 1 | 20210428 |
| EPI_ISL_16304161 | NSP3 | hCoV-19/Japan/RIMD19484/2022 | C | 1731 | stop | 4 | 20220829 |
| EPI_ISL_1051606 | NSP3 | hCoV-19/England/OXON-F5E408/2021 | C | 1731 | T | 2 | 20210123 |
| EPI_ISL_19747031 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00015789/2025 | C | 1731 | F | 489 | 20250202 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | C | 1731 | V | 9 | 20221226 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | C | 1731 | N | 14 | 20230401 |
| EPI_ISL_19643660 | NSP3 | hCoV-19/USA/TX-HMH-M-146847/2024 | C | 1731 | del | 36 | 20241029 |
| EPI_ISL_19431742 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341199/2024 | C | 1731 | M | 22 | 20240828 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | E | 1732 | S | 3 | 20221226 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | E | 1732 | W | 1 | 20220812 |
| EPI_ISL_19643660 | NSP3 | hCoV-19/USA/TX-HMH-M-146847/2024 | E | 1732 | stop | 36 | 20241029 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | E | 1732 | Y | 1 | 20210525 |
| EPI_ISL_19506603 | NSP3 | hCoV-19/Italy/LOM_Unimi-4762-24/2024 | E | 1732 | D | 233 | 20241012 |
| EPI_ISL_2903010 | NSP3 | hCoV-19/England/OXON-F877C1/2020 | E | 1732 | H | 3 | 20201123 |
| EPI_ISL_11944287 | NSP3 | hCoV-19/England/DHSC-CYN6QJI/2022 | E | 1732 | Q | 11 | 20220206 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 1732 | F | 1 | 20210318 |
| EPI_ISL_10858419 | NSP3 | hCoV-19/Turkey/HSGM-G2218/2022 | E | 1732 | R | 3 | 20220217 |
| EPI_ISL_17181388 | NSP3 | hCoV-19/USA/TX-HMH-M-125980/2023 | E | 1732 | K | 86 | 20230217 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | E | 1732 | V | 22 | 20230401 |
| EPI_ISL_13847311 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2968/2022 | E | 1732 | T | 5 | 20220704 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | E | 1732 | N | 4 | 20220209 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | E | 1732 | P | 1 | 20210812 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | E | 1732 | L | 5 | 20230101 |
| EPI_ISL_17530377 | NSP3 | hCoV-19/India/MH-ICMR-NIV-1756/2023 | E | 1732 | del | 48 | 20230411 |
| EPI_ISL_18771392 | NSP3 | hCoV-19/Thailand/NIC_AYA_POS5466/2023 | E | 1732 | A | 30 | 20231206 |
| EPI_ISL_17349550 | NSP3 | hCoV-19/India/KA-VRDL-33680/2023 | E | 1732 | G | 8 | 20230301 |
| EPI_ISL_11080227 | NSP3 | hCoV-19/England/BRBR-39F54C4/2022 | E | 1732 | Z | 6 | 20220309 |
| EPI_ISL_12658876 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010122-1291/2022 | E | 1733 | S | 1 | 20220101 |
| EPI_ISL_11930033 | NSP3 | hCoV-19/England/DHSC-CYBJ95M/2022 | E | 1733 | insQRLFTTV | 1 | 20220202 |
| EPI_ISL_17021247 | NSP3 | hCoV-19/Chile/RM-199373/2021 | E | 1733 | P | 1 | 20211227 |
| EPI_ISL_19469188 | NSP3 | hCoV-19/env/Ukraine/86366/2024 | E | 1733 | A | 131 | 20240701 |
| EPI_ISL_7117024 | NSP3 | hCoV-19/Germany/BB-RKI-I-353528/2021 | E | 1733 | insVSstop | 1 | 20211125 |
| EPI_ISL_17097332 | NSP3 | hCoV-19/England/QEUH-326DDC90/2023 | E | 1733 | Z | 8 | 20230218 |
| EPI_ISL_8806987 | NSP3 | hCoV-19/India/GA-NCCS-3055200187049/2021 | E | 1733 | H | 1 | 20211002 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | E | 1733 | del | 63 | 20240828 |
| EPI_ISL_16737292 | NSP3 | hCoV-19/England/PLYM-326A75FE/2023 | E | 1733 | I | 78 | 20230117 |
| EPI_ISL_19387454 | NSP3 | hCoV-19/USA/CO-CDPHE-42180104/2024 | E | 1733 | G | 780 | 20240726 |
| EPI_ISL_2903010 | NSP3 | hCoV-19/England/OXON-F877C1/2020 | E | 1733 | Y | 2 | 20201123 |
| EPI_ISL_18307690 | NSP3 | hCoV-19/USA/TX-CDC-QDX84783003/2023 | E | 1733 | K | 46 | 20230904 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | E | 1733 | stop | 8 | 20220812 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | E | 1733 | L | 8 | 20230401 |
| EPI_ISL_16599824 | NSP3 | hCoV-19/USA/TX-HMH-123094/2023 | E | 1733 | V | 12 | 20230110 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | E | 1733 | N | 13 | 20220222 |
| EPI_ISL_19816940 | NSP3 | hCoV-19/Norway/3559/2025 | E | 1733 | D | 305 | 20250303 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | E | 1733 | R | 11 | 20230307 |
| EPI_ISL_17256396 | NSP3 | hCoV-19/Germany/BY-RKI-I-1122452/2023 | E | 1733 | Q | 17 | 20230307 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | S | 1734 | V | 3 | 20220811 |
| EPI_ISL_17020828 | NSP3 | hCoV-19/Chile/RM-197652/2021 | S | 1734 | E | 4 | 20211224 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | S | 1734 | insLstopF | 1 | 20200701 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1734 | N | 20 | 20230401 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | S | 1734 | del | 70 | 20240828 |
| EPI_ISL_950830 | NSP3 | hCoV-19/England/OXON-F45237/2020 | S | 1734 | insLQ | 1 | 20201222 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | S | 1734 | K | 4 | 20211015 |
| EPI_ISL_19749796 | NSP3 | hCoV-19/USA/NY-CDC-LC1132619/2025 | S | 1734 | P | 1321 | 20250211 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | S | 1734 | Q | 7 | 20230108 |
| EPI_ISL_16258489 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1994/2022 | S | 1734 | stop | 12 | 20220812 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | S | 1734 | M | 1 | 20200701 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | S | 1734 | I | 13 | 20220117 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | S | 1734 | R | 3 | 20230401 |
| EPI_ISL_19433222 | NSP3 | hCoV-19/Puerto Rico/PR-CVL-026691/2024 | S | 1734 | A | 256 | 20240905 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1734 | F | 1 | 20220210 |
| EPI_ISL_19385436 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJOSM/2024 | S | 1734 | T | 11 | 20240708 |
| EPI_ISL_17530271 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13897/2023 | S | 1734 | C | 2 | 20230403 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | S | 1734 | H | 5 | 20220222 |
| EPI_ISL_16516384 | NSP3 | hCoV-19/USA/AK-ANMC-0022/2023 | S | 1734 | L | 18 | 20230109 |
| EPI_ISL_11938292 | NSP3 | hCoV-19/England/DHSC-CYDJHPJ/2022 | S | 1735 | M | 1 | 20220216 |
| EPI_ISL_18654308 | NSP3 | hCoV-19/Canada/QC-L00686041001/2023 | S | 1735 | T | 24 | 20231211 |
| EPI_ISL_3299581 | NSP3 | hCoV-19/Sweden/UUH-000199818460N2/2021 | S | 1735 | G | 1 | 20210428 |
| EPI_ISL_15292694 | NSP3 | hCoV-19/India/GA-NCCS-563073855/2021 | S | 1735 | R | 4 | 20211105 |
| EPI_ISL_16737292 | NSP3 | hCoV-19/England/PLYM-326A75FE/2023 | S | 1735 | V | 79 | 20230117 |
| EPI_ISL_13460704 | NSP3 | hCoV-19/Israel/ICH-741233298/2022 | S | 1735 | stop | 3 | 20220621 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 1735 | K | 3 | 20221226 |
| EPI_ISL_3299584 | NSP3 | hCoV-19/Sweden/UUH-000199777591N2/2021 | S | 1735 | D | 2 | 20210428 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | S | 1735 | E | 1 | 20211006 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | S | 1735 | P | 9 | 20220814 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | S | 1735 | Q | 3 | 20230401 |
| EPI_ISL_19363093 | NSP3 | hCoV-19/New Zealand/24YA6345/2024 | S | 1735 | Y | 26 | 20240806 |
| EPI_ISL_16258493 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2002/2022 | S | 1735 | N | 6 | 20220811 |
| EPI_ISL_19691326 | NSP3 | hCoV-19/Canada/ON-PHL-202501582/2025 | S | 1735 | C | 14 | 20250113 |
| EPI_ISL_19529097 | NSP3 | hCoV-19/Canada/AB-ABPHL-125539/2024 | S | 1735 | A | 104 | 20241017 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | S | 1735 | del | 80 | 20240828 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1735 | H | 17 | 20230401 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | S | 1735 | I | 15 | 20220117 |
| EPI_ISL_17530271 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13897/2023 | S | 1735 | L | 10 | 20230403 |
| EPI_ISL_19820013 | NSP3 | hCoV-19/Canada/ON-PHL-202504930/2025 | S | 1735 | F | 1957 | 20250318 |
| EPI_ISL_8194881 | NSP3 | hCoV-19/Egypt/NRC-6351/2020 | A | 1736 | F | 1 | 20200726 |
| EPI_ISL_11330483 | NSP3 | hCoV-19/Nigeria/NCDC-NRL-UR-GL-003117/2022 | A | 1736 | insINRP | 1 | 20220306 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | A | 1736 | P | 12 | 20230401 |
| EPI_ISL_11983866 | NSP3 | hCoV-19/USA/CA-CCPHL-2082/2022 | A | 1736 | I | 6 | 20220310 |
| EPI_ISL_17530271 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13897/2023 | A | 1736 | L | 29 | 20230403 |
| EPI_ISL_16037382 | NSP3 | hCoV-19/USA/MA-UMASSMED-202118932/2022 | A | 1736 | E | 5 | 20220609 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | A | 1736 | del | 84 | 20240828 |
| EPI_ISL_16258497 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2068/2022 | A | 1736 | K | 4 | 20220731 |
| EPI_ISL_16737292 | NSP3 | hCoV-19/England/PLYM-326A75FE/2023 | A | 1736 | C | 87 | 20230117 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | A | 1736 | Y | 1 | 20210804 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | A | 1736 | insQ | 1 | 20210812 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | A | 1736 | Q | 8 | 20220222 |
| EPI_ISL_19813393 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56792/2025 | A | 1736 | T | 938 | 20250320 |
| EPI_ISL_1167188 | NSP3 | hCoV-19/Egypt/MASRI-C5-007/2020 | A | 1736 | M | 1 | 20200701 |
| EPI_ISL_18555206 | NSP3 | hCoV-19/USA/UT-UPHL-1124343695/2023 | A | 1736 | S | 313 | 20231108 |
| EPI_ISL_1475544 | NSP3 | hCoV-19/England/OXON-F77FEA/2021 | A | 1736 | H | 1 | 20210215 |
| EPI_ISL_19788851 | NSP3 | hCoV-19/Wales/CLIMB-CM7YGA8D/2025 | A | 1736 | V | 209140 | 20250303 |
| EPI_ISL_18105363 | NSP3 | hCoV-19/Jiangsu/WXCDC-428/2023 | A | 1736 | G | 6 | 20230627 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | A | 1736 | D | 1 | 20220126 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | A | 1736 | stop | 2 | 20210812 |
| EPI_ISL_17530271 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13897/2023 | K | 1737 | Q | 21 | 20230403 |
| EPI_ISL_16737292 | NSP3 | hCoV-19/England/PLYM-326A75FE/2023 | K | 1737 | L | 80 | 20230117 |
| EPI_ISL_3178850 | NSP3 | hCoV-19/England/OXON-FA5FE3/2021 | K | 1737 | W | 2 | 20210716 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | K | 1737 | del | 84 | 20240828 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | K | 1737 | M | 5 | 20211012 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1737 | D | 1 | 20220210 |
| EPI_ISL_19714486 | NSP3 | hCoV-19/Russia/SMO-RII-MH219396S/2024 | K | 1737 | T | 21 | 20241128 |
| EPI_ISL_15292694 | NSP3 | hCoV-19/India/GA-NCCS-563073855/2021 | K | 1737 | F | 3 | 20211105 |
| EPI_ISL_19829150 | NSP3 | hCoV-19/USA/VA-CDC-LC1136465/2025 | K | 1737 | R | 945 | 20250402 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | K | 1737 | insLFT | 2 | 20210927 |
| EPI_ISL_19420268 | NSP3 | hCoV-19/USA/NM-NMDOH-025013/2024 | K | 1737 | I | 19 | 20240729 |
| EPI_ISL_7509452 | NSP3 | hCoV-19/USA/CA-CSMC465/2020 | K | 1737 | C | 1 | 20201122 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | K | 1737 | H | 1 | 20210812 |
| EPI_ISL_18139469 | NSP3 | hCoV-19/Egypt/CPHL-EGY23978/2022 | K | 1737 | V | 6 | 20220814 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | K | 1737 | Y | 2 | 20230217 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | K | 1737 | A | 2 | 20210518 |
| EPI_ISL_19469188 | NSP3 | hCoV-19/env/Ukraine/86366/2024 | K | 1737 | S | 8 | 20240701 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | K | 1737 | stop | 3 | 20210809 |
| EPI_ISL_18502145 | NSP3 | hCoV-19/USA/CA-CDPH-500127691/2023 | K | 1737 | N | 80 | 20231015 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | K | 1737 | E | 5 | 20230401 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | S | 1738 | K | 6 | 20230217 |
| EPI_ISL_3299584 | NSP3 | hCoV-19/Sweden/UUH-000199777591N2/2021 | S | 1738 | Y | 1 | 20210428 |
| EPI_ISL_16575561 | NSP3 | hCoV-19/Japan/66711/2022 | S | 1738 | F | 8 | 20220703 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | S | 1738 | insstopstopHstopRFI | 3 | 20230401 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | S | 1738 | N | 33 | 20230401 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | S | 1738 | E | 2 | 20210801 |
| EPI_ISL_7747614 | NSP3 | hCoV-19/USA/KS-KSU-5251/2021 | S | 1738 | stop | 3 | 20211015 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | S | 1738 | I | 12 | 20220117 |
| EPI_ISL_11938292 | NSP3 | hCoV-19/England/DHSC-CYDJHPJ/2022 | S | 1738 | M | 3 | 20220216 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | S | 1738 | V | 1 | 20220126 |
| EPI_ISL_19813393 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56792/2025 | S | 1738 | P | 123 | 20250320 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | S | 1738 | G | 1 | 20210928 |
| EPI_ISL_19384865 | NSP3 | hCoV-19/Hubei/HCDC-SZ6637/2024 | S | 1738 | A | 491 | 20240819 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | S | 1738 | R | 1 | 20210809 |
| EPI_ISL_19589625 | NSP3 | hCoV-19/Philippines/PH-RITM-4739/2024 | S | 1738 | T | 72 | 20241009 |
| EPI_ISL_17020828 | NSP3 | hCoV-19/Chile/RM-197652/2021 | S | 1738 | D | 4 | 20211224 |
| EPI_ISL_9114647 | NSP3 | hCoV-19/Pakistan/9044314/2021 | S | 1738 | H | 1 | 20211228 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | S | 1738 | del | 77 | 20240828 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | S | 1738 | Q | 2 | 20230421 |
| EPI_ISL_19831422 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56923/2025 | S | 1738 | L | 3596 | 20250325 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | S | 1738 | C | 1 | 20210518 |
| EPI_ISL_3299584 | NSP3 | hCoV-19/Sweden/UUH-000199777591N2/2021 | A | 1739 | H | 1 | 20210428 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | A | 1739 | D | 2 | 20210928 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | A | 1739 | M | 1 | 20230217 |
| EPI_ISL_8194870 | NSP3 | hCoV-19/Egypt/NRC-6701/2020 | A | 1739 | stop | 1 | 20200915 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | A | 1739 | R | 5 | 20230421 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | A | 1739 | P | 2 | 20230217 |
| EPI_ISL_12581352 | NSP3 | hCoV-19/Turkey/HSGM-GS2451/2022 | A | 1739 | K | 1 | 20220405 |
| EPI_ISL_8029226 | NSP3 | hCoV-19/USA/PA-CDC-LC0422085/2021 | A | 1739 | G | 30 | 20211210 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | A | 1739 | I | 3 | 20220814 |
| EPI_ISL_19819795 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YE6U5/2025 | A | 1739 | V | 477 | 20250314 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | A | 1739 | del | 74 | 20240828 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | A | 1739 | E | 8 | 20221226 |
| EPI_ISL_18995111 | NSP3 | hCoV-19/Japan/PG-599536/2024 | A | 1739 | S | 153 | 20240213 |
| EPI_ISL_19469188 | NSP3 | hCoV-19/env/Ukraine/86366/2024 | A | 1739 | Y | 4 | 20240701 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | A | 1739 | Q | 98 | 20230401 |
| EPI_ISL_3759977 | NSP3 | hCoV-19/USA/ID-IBL-747464/2021 | A | 1739 | C | 1 | 20210809 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | A | 1739 | L | 18 | 20230401 |
| EPI_ISL_3178850 | NSP3 | hCoV-19/England/OXON-FA5FE3/2021 | A | 1739 | N | 3 | 20210716 |
| EPI_ISL_19712449 | NSP3 | hCoV-19/Japan/FR004-0042/2025 | A | 1739 | T | 446 | 20250117 |
| EPI_ISL_11355258 | NSP3 | hCoV-19/France/GES-ChNa-210064525801/2021 | S | 1740 | G | 1 | 20210808 |
| EPI_ISL_17291198 | NSP3 | hCoV-19/USA/CA-CDPH-500103040/2023 | S | 1740 | P | 7 | 20230124 |
| EPI_ISL_19242428 | NSP3 | hCoV-19/Yunnan/YNCDC-1040/2024 | S | 1740 | A | 28 | 20240514 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1740 | R | 20 | 20230401 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | S | 1740 | del | 78 | 20240828 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | S | 1740 | insSLLQSAYV | 1 | 20210801 |
| EPI_ISL_17372580 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2625/2023 | S | 1740 | I | 7 | 20230120 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | S | 1740 | D | 1 | 20210518 |
| EPI_ISL_17275322 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45847/2023 | S | 1740 | Q | 2 | 20230217 |
| EPI_ISL_17852000 | NSP3 | hCoV-19/USA/TN-VIEW-L8456425491174/2023 | S | 1740 | C | 49 | 20230310 |
| EPI_ISL_6774940 | NSP3 | hCoV-19/Poland/PZH-UMB-3562/2021 | S | 1740 | L | 7 | 20211111 |
| EPI_ISL_10951241 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9166/2022 | S | 1740 | V | 12 | 20220210 |
| EPI_ISL_11951590 | NSP3 | hCoV-19/England/DHSC-CYYFPT4/2022 | S | 1740 | K | 1 | 20220104 |
| EPI_ISL_12294090 | NSP3 | hCoV-19/Thailand/NIC_BKK_16830/2022 | S | 1740 | stop | 3 | 20220326 |
| EPI_ISL_17530271 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13897/2023 | S | 1740 | Y | 25 | 20230403 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | S | 1740 | F | 11 | 20220812 |
| EPI_ISL_19469188 | NSP3 | hCoV-19/env/Ukraine/86366/2024 | S | 1740 | T | 14 | 20240701 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 1740 | E | 1 | 20221226 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1740 | H | 2 | 20220210 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | S | 1740 | N | 3 | 20230117 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 1741 | F | 21 | 20220812 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | V | 1741 | Q | 2 | 20220126 |
| EPI_ISL_18914972 | NSP3 | hCoV-19/env/Ukraine/80863/2023 | V | 1741 | G | 5 | 20231012 |
| EPI_ISL_10951241 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9166/2022 | V | 1741 | S | 4 | 20220210 |
| EPI_ISL_8803745 | NSP3 | hCoV-19/India/GA-NCCS-3055200159428/2021 | V | 1741 | insSTVS | 1 | 20210808 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | V | 1741 | L | 50 | 20230421 |
| EPI_ISL_16737292 | NSP3 | hCoV-19/England/PLYM-326A75FE/2023 | V | 1741 | A | 84 | 20230117 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1741 | T | 4 | 20230101 |
| EPI_ISL_19550515 | NSP3 | hCoV-19/Sichuan/PZHCDC-36-2/2024 | V | 1741 | I | 349 | 20240812 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | V | 1741 | C | 22 | 20230401 |
| EPI_ISL_7509452 | NSP3 | hCoV-19/USA/CA-CSMC465/2020 | V | 1741 | insAR | 1 | 20201122 |
| EPI_ISL_9519845 | NSP3 | hCoV-19/France/IDF-HMN-22012240830/2022 | V | 1741 | N | 1 | 20220124 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | V | 1741 | K | 3 | 20230307 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1741 | H | 1 | 20201214 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | V | 1741 | stop | 3 | 20230401 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | V | 1741 | del | 75 | 20240828 |
| EPI_ISL_5308871 | NSP3 | hCoV-19/Sweden/UUH-000200164043/2021 | V | 1741 | insXXX | 1 | 20210909 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | V | 1741 | Y | 2 | 20230117 |
| EPI_ISL_18081221 | NSP3 | hCoV-19/env/Germany/BY-LGL-5942450/2023 | Y | 1742 | F | 37 | 20230703 |
| EPI_ISL_10951241 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9166/2022 | Y | 1742 | T | 3 | 20220210 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | Y | 1742 | K | 4 | 20230108 |
| EPI_ISL_17372566 | NSP3 | hCoV-19/India/TN-SPHL-2877/2023 | Y | 1742 | N | 21 | 20230228 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | Y | 1742 | del | 78 | 20240828 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | Y | 1742 | I | 5 | 20220814 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | Y | 1742 | D | 12 | 20230307 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | Y | 1742 | W | 2 | 20230117 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | Y | 1742 | insT | 1 | 20210807 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | Y | 1742 | insTK | 1 | 20210806 |
| EPI_ISL_17168321 | NSP3 | hCoV-19/USA/NJ-GBW-H20-305-0354/2023 | Y | 1742 | L | 24 | 20230228 |
| EPI_ISL_3178580 | NSP3 | hCoV-19/England/OXON-FA461C/2021 | Y | 1742 | J | 1 | 20210715 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | Y | 1742 | A | 2 | 20210812 |
| EPI_ISL_15262288 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL-2193/2022 | Y | 1742 | S | 5 | 20220908 |
| EPI_ISL_17372580 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2625/2023 | Y | 1742 | R | 7 | 20230120 |
| EPI_ISL_8194868 | NSP3 | hCoV-19/Egypt/NRC-6453/2020 | Y | 1742 | V | 1 | 20200817 |
| EPI_ISL_19060843 | NSP3 | hCoV-19/Russia/MO-RII-MH179645S/2024 | Y | 1742 | H | 16 | 20240115 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | Y | 1742 | C | 9 | 20230401 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | Y | 1743 | G | 1 | 20220814 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | Y | 1743 | L | 11 | 20220126 |
| EPI_ISL_16737292 | NSP3 | hCoV-19/England/PLYM-326A75FE/2023 | Y | 1743 | V | 84 | 20230117 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | Y | 1743 | T | 30 | 20230421 |
| EPI_ISL_3759981 | NSP3 | hCoV-19/USA/ID-IBL-747468/2021 | Y | 1743 | insY | 1 | 20210809 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Y | 1743 | S | 4 | 20221226 |
| EPI_ISL_10858494 | NSP3 | hCoV-19/Turkey/HSGM-G2355/2022 | Y | 1743 | H | 23 | 20220217 |
| EPI_ISL_17591969 | NSP3 | hCoV-19/Nepal/NPHL-S-2422/2023 | Y | 1743 | insD | 1 | 20230305 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1743 | E | 1 | 20220210 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | Y | 1743 | del | 75 | 20240828 |
| EPI_ISL_17168321 | NSP3 | hCoV-19/USA/NJ-GBW-H20-305-0354/2023 | Y | 1743 | Q | 12 | 20230228 |
| EPI_ISL_12294090 | NSP3 | hCoV-19/Thailand/NIC_BKK_16830/2022 | Y | 1743 | C | 29 | 20220326 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | Y | 1743 | M | 3 | 20220210 |
| EPI_ISL_17372580 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2625/2023 | Y | 1743 | K | 7 | 20230120 |
| EPI_ISL_17372566 | NSP3 | hCoV-19/India/TN-SPHL-2877/2023 | Y | 1743 | A | 2 | 20230228 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | Y | 1743 | stop | 15 | 20230401 |
| EPI_ISL_18081409 | NSP3 | hCoV-19/USA/CA-HLX-STM-EUHN2FEWK/2023 | Y | 1743 | F | 6 | 20230715 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | Y | 1743 | I | 1 | 20200721 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | Y | 1743 | W | 2 | 20220812 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1743 | D | 1 | 20210318 |
| EPI_ISL_12740213 | NSP3 | hCoV-19/USA/KS-KSU-2027/2022 | Y | 1743 | N | 4 | 20220208 |
| EPI_ISL_19058353 | NSP3 | hCoV-19/USA/MN-MDH-41421/2024 | S | 1744 | C | 15 | 20240327 |
| EPI_ISL_18139469 | NSP3 | hCoV-19/Egypt/CPHL-EGY23978/2022 | S | 1744 | R | 4 | 20220814 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1744 | F | 1 | 20220210 |
| EPI_ISL_16394732 | NSP3 | hCoV-19/Spain/AS-262201557/2022 | S | 1744 | N | 9 | 20221217 |
| EPI_ISL_2833850 | NSP3 | hCoV-19/Kuwait/KCCC-95460-3431387/2021 | S | 1744 | insV | 1 | 20210628 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 1744 | K | 2 | 20221226 |
| EPI_ISL_17372566 | NSP3 | hCoV-19/India/TN-SPHL-2877/2023 | S | 1744 | V | 10 | 20230228 |
| EPI_ISL_1928466 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSAGOG-GSEQ-2343/2021 | S | 1744 | H | 4 | 20210329 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | S | 1744 | del | 75 | 20240828 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | S | 1744 | Q | 6 | 20220117 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | S | 1744 | insFstopWstopIKMstop | 2 | 20230401 |
| EPI_ISL_4198511 | NSP3 | hCoV-19/Italy/SAR-3119/2021 | S | 1744 | insFstopWstopIKVstop | 1 | 20210902 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | S | 1744 | E | 2 | 20210525 |
| EPI_ISL_1051606 | NSP3 | hCoV-19/England/OXON-F5E408/2021 | S | 1744 | M | 1 | 20210123 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | S | 1744 | T | 33 | 20230421 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | S | 1744 | stop | 4 | 20220210 |
| EPI_ISL_19548897 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-105809/2024 | S | 1744 | G | 148 | 20241003 |
| EPI_ISL_7509452 | NSP3 | hCoV-19/USA/CA-CSMC465/2020 | S | 1744 | A | 1 | 20201122 |
| EPI_ISL_17372580 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2625/2023 | S | 1744 | L | 9 | 20230120 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | S | 1744 | I | 16 | 20230401 |
| EPI_ISL_19633136 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6898/2024 | Q | 1745 | K | 4 | 20240805 |
| EPI_ISL_17275304 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45829/2023 | Q | 1745 | L | 2 | 20230217 |
| EPI_ISL_8936192 | NSP3 | hCoV-19/France/GES-HMN-21122211126/2021 | Q | 1745 | Z | 1 | 20211213 |
| EPI_ISL_3003454 | NSP3 | hCoV-19/England/OXON-F8BA97/2020 | Q | 1745 | M | 1 | 20201016 |
| EPI_ISL_7508906 | NSP3 | hCoV-19/USA/CA-CSMC434/2020 | Q | 1745 | E | 1 | 20201230 |
| EPI_ISL_15895785 | NSP3 | hCoV-19/Russia/MOW-CRIE-96933/2022 | Q | 1745 | stop | 6 | 20220921 |
| EPI_ISL_3421731 | NSP3 | hCoV-19/England/OXON-FA753A/2020 | Q | 1745 | C | 2 | 20201208 |
| EPI_ISL_15292694 | NSP3 | hCoV-19/India/GA-NCCS-563073855/2021 | Q | 1745 | N | 10 | 20211105 |
| EPI_ISL_19334742 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143028/2024 | Q | 1745 | S | 10 | 20240719 |
| EPI_ISL_12321724 | NSP3 | hCoV-19/Turkey/HSGM-GS2536/2022 | Q | 1745 | P | 3 | 20220405 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1745 | A | 2 | 20220210 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | Q | 1745 | del | 74 | 20240828 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Q | 1745 | G | 2 | 20221226 |
| EPI_ISL_19658129 | NSP3 | hCoV-19/USA/CO-CDPHE-42687037/2024 | Q | 1745 | H | 1737 | 20241220 |
| EPI_ISL_7508906 | NSP3 | hCoV-19/USA/CA-CSMC434/2020 | Q | 1745 | insT | 1 | 20201230 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | Q | 1745 | V | 28 | 20230421 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | Q | 1745 | R | 28 | 20230401 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | Q | 1745 | T | 39 | 20211103 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | Q | 1745 | I | 1 | 20210928 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1746 | K | 2 | 20210318 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1746 | E | 1 | 20220210 |
| EPI_ISL_12319886 | NSP3 | hCoV-19/Turkey/HSGM-GS1475/2022 | L | 1746 | R | 1 | 20220401 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | L | 1746 | del | 55 | 20230217 |
| EPI_ISL_19819816 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YFPPY/2025 | L | 1746 | F | 2550 | 20250322 |
| EPI_ISL_4169823 | NSP3 | hCoV-19/USA/IA-SHL-1837169/2021 | L | 1746 | C | 1 | 20210907 |
| EPI_ISL_16394739 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2418/2022 | L | 1746 | Q | 1 | 20221220 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | L | 1746 | M | 1 | 20210806 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 1746 | D | 2 | 20221226 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | L | 1746 | S | 29 | 20230421 |
| EPI_ISL_19226513 | NSP3 | hCoV-19/Lithuania/MB240416_0057/2024 | L | 1746 | P | 4 | 20240409 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | L | 1746 | A | 7 | 20220117 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | L | 1746 | Y | 37 | 20211103 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | L | 1746 | H | 13 | 20230401 |
| EPI_ISL_14757042 | NSP3 | hCoV-19/Luxembourg/LNS9006259/2022 | L | 1746 | V | 9 | 20220803 |
| EPI_ISL_17543631 | NSP3 | hCoV-19/USA/MD-CDC-LC1037599/2023 | L | 1746 | J | 2 | 20230411 |
| EPI_ISL_3178850 | NSP3 | hCoV-19/England/OXON-FA5FE3/2021 | L | 1746 | insQKLNLQR | 2 | 20210716 |
| EPI_ISL_19793684 | NSP3 | hCoV-19/USA/NM-NMDOH-2025004701/2025 | L | 1746 | I | 87 | 20250201 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | M | 1747 | del | 53 | 20230217 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | M | 1747 | W | 1 | 20210921 |
| EPI_ISL_18541089 | NSP3 | hCoV-19/France/BFC-IPP27288/2023 | M | 1747 | L | 47 | 20231113 |
| EPI_ISL_17372580 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2625/2023 | M | 1747 | K | 8 | 20230120 |
| EPI_ISL_18490022 | NSP3 | hCoV-19/Sweden/D-6531614276/2023 | M | 1747 | T | 66 | 20231029 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | M | 1747 | stop | 13 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | M | 1747 | F | 2 | 20221226 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | M | 1747 | N | 2 | 20210518 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | M | 1747 | Y | 23 | 20220117 |
| EPI_ISL_19770306 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y8TKK/2025 | M | 1747 | V | 857 | 20250221 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | M | 1747 | H | 1 | 20201214 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | M | 1747 | insFNLY | 1 | 20210813 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | M | 1747 | P | 1 | 20220126 |
| EPI_ISL_8812986 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-110321-1232/2021 | M | 1747 | insVstopIRHstop | 2 | 20211103 |
| EPI_ISL_19803542 | NSP3 | hCoV-19/USA/WI-WSLH-2500743/2025 | M | 1747 | I | 1250 | 20250210 |
| EPI_ISL_10397213 | NSP3 | hCoV-19/Turkey/HSGM-G1631/2022 | M | 1747 | R | 3 | 20220214 |
| EPI_ISL_17021247 | NSP3 | hCoV-19/Chile/RM-199373/2021 | C | 1748 | L | 2 | 20211227 |
| EPI_ISL_19185958 | NSP3 | hCoV-19/Brazil/SP-AR-1452/2024 | C | 1748 | F | 26 | 20240319 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | C | 1748 | M | 4 | 20230104 |
| EPI_ISL_19160098 | NSP3 | hCoV-19/Canada/MB-CPL-710850/2024 | C | 1748 | G | 25 | 20240325 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | C | 1748 | insTRSG | 1 | 20210815 |
| EPI_ISL_12320557 | NSP3 | hCoV-19/Turkey/HSGM-G8503/2022 | C | 1748 | stop | 1 | 20220410 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | C | 1748 | del | 83 | 20230217 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | C | 1748 | V | 9 | 20221226 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | C | 1748 | A | 1 | 20210518 |
| EPI_ISL_16860791 | NSP3 | hCoV-19/USA/DE-CDC-LC1002321/2023 | C | 1748 | W | 2 | 20230126 |
| EPI_ISL_19376571 | NSP3 | hCoV-19/env/Brazil/RJ-LVCA-WWTP_C2/2021 | C | 1748 | I | 1 | 20210430 |
| EPI_ISL_17969319 | NSP3 | hCoV-19/Sweden/S-1260818729VN/2023 | C | 1748 | S | 40 | 20230523 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | C | 1748 | Q | 2 | 20220126 |
| EPI_ISL_2903010 | NSP3 | hCoV-19/England/OXON-F877C1/2020 | C | 1748 | T | 2 | 20201123 |
| EPI_ISL_425279 | NSP3 | hCoV-19/England/CAMB-73AFB/2020 | C | 1748 | H | 1 | 20200330 |
| EPI_ISL_11950457 | NSP3 | hCoV-19/England/DHSC-CYYAUBQ/2022 | C | 1748 | P | 2 | 20220114 |
| EPI_ISL_19066955 | NSP3 | hCoV-19/USA/DE-DHSS-B1337594/2024 | C | 1748 | Y | 43 | 20240312 |
| EPI_ISL_12321724 | NSP3 | hCoV-19/Turkey/HSGM-GS2536/2022 | C | 1748 | R | 4 | 20220405 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | Q | 1749 | P | 3 | 20210813 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | Q | 1749 | I | 1 | 20221226 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | Q | 1749 | E | 4 | 20220814 |
| EPI_ISL_12223839 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0832/2022 | Q | 1749 | C | 1 | 20220126 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | Q | 1749 | K | 25 | 20240828 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 1749 | N | 1 | 20210318 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | Q | 1749 | A | 2 | 20210806 |
| EPI_ISL_2903010 | NSP3 | hCoV-19/England/OXON-F877C1/2020 | Q | 1749 | S | 6 | 20201123 |
| EPI_ISL_17021247 | NSP3 | hCoV-19/Chile/RM-199373/2021 | Q | 1749 | D | 1 | 20211227 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | Q | 1749 | V | 15 | 20230421 |
| EPI_ISL_12658809 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1323/2022 | Q | 1749 | Y | 15 | 20220105 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | Q | 1749 | L | 48 | 20230401 |
| EPI_ISL_11951590 | NSP3 | hCoV-19/England/DHSC-CYYFPT4/2022 | Q | 1749 | T | 2 | 20220104 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | Q | 1749 | del | 92 | 20230217 |
| EPI_ISL_16632392 | NSP3 | hCoV-19/USA/TX-PHH-CS-02121/2022 | Q | 1749 | stop | 9 | 20221115 |
| EPI_ISL_18870738 | NSP3 | hCoV-19/env/Ukraine/84309/2023 | Q | 1749 | R | 24 | 20231221 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | Q | 1749 | G | 1 | 20210928 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | Q | 1749 | insI | 21 | 20240828 |
| EPI_ISL_8812967 | NSP3 | hCoV-19/USA/OR-TRACE-POLK-042521-1190/2021 | Q | 1749 | H | 1 | 20210425 |
| EPI_ISL_3419395 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ6284/2021 | Q | 1749 | Z | 1 | 20210618 |
| EPI_ISL_17021247 | NSP3 | hCoV-19/Chile/RM-199373/2021 | P | 1750 | Q | 1 | 20211227 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | P | 1750 | I | 4 | 20230217 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | P | 1750 | del | 87 | 20230217 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | P | 1750 | insH | 1 | 20210806 |
| EPI_ISL_1075609 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-21165/2021 | P | 1750 | A | 1 | 20210101 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | P | 1750 | insDTR | 1 | 20210525 |
| EPI_ISL_8770552 | NSP3 | hCoV-19/Poland/WSSEGDA-102/2022 | P | 1750 | H | 10 | 20220112 |
| EPI_ISL_11951590 | NSP3 | hCoV-19/England/DHSC-CYYFPT4/2022 | P | 1750 | insHYVWWT | 1 | 20220104 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | P | 1750 | N | 13 | 20230421 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | P | 1750 | stop | 18 | 20230104 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | P | 1750 | V | 2 | 20221226 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | P | 1750 | M | 17 | 20230401 |
| EPI_ISL_18346047 | NSP3 | hCoV-19/USA/HI-TAMC_2848/2023 | P | 1750 | T | 134 | 20230821 |
| EPI_ISL_19828130 | NSP3 | hCoV-19/Australia/QLD0x0154D4/2025 | P | 1750 | S | 2225 | 20250327 |
| EPI_ISL_17558359 | NSP3 | hCoV-19/Sweden/03_000200562815N2/2023 | P | 1750 | L | 30 | 20230413 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | P | 1750 | K | 3 | 20210928 |
| EPI_ISL_11950457 | NSP3 | hCoV-19/England/DHSC-CYYAUBQ/2022 | P | 1750 | G | 2 | 20220114 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1751 | D | 1 | 20220210 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | I | 1751 | insRHstop | 1 | 20210806 |
| EPI_ISL_19065696 | NSP3 | hCoV-19/South Korea/KDCA290975/2024 | I | 1751 | L | 58 | 20240325 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | I | 1751 | del | 74 | 20230217 |
| EPI_ISL_16284111 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223284815/2022 | I | 1751 | insLLLDQALVSDVGLMCQPI | 1 | 20221124 |
| EPI_ISL_3178850 | NSP3 | hCoV-19/England/OXON-FA5FE3/2021 | I | 1751 | stop | 2 | 20210716 |
| EPI_ISL_19315154 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-1401/2024 | I | 1751 | T | 226 | 20240711 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | I | 1751 | N | 1 | 20221226 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | I | 1751 | insRHstopCLM | 1 | 20210813 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | I | 1751 | F | 6 | 20230104 |
| EPI_ISL_19551010 | NSP3 | hCoV-19/Australia/SA-2103172/2024 | I | 1751 | V | 164 | 20241109 |
| EPI_ISL_19338253 | NSP3 | hCoV-19/Japan/FR021-0658/2024 | I | 1751 | M | 397 | 20240725 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | I | 1751 | Y | 10 | 20210813 |
| EPI_ISL_8194868 | NSP3 | hCoV-19/Egypt/NRC-6453/2020 | I | 1751 | H | 2 | 20200817 |
| EPI_ISL_7894304 | NSP3 | hCoV-19/England/ALDP-2E8B24F/2021 | I | 1751 | J | 2 | 20211211 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1751 | G | 1 | 20210318 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | I | 1751 | S | 4 | 20230217 |
| EPI_ISL_9856999 | NSP3 | hCoV-19/Finland/THL-202205154/2022 | I | 1751 | R | 1 | 20220118 |
| EPI_ISL_17021247 | NSP3 | hCoV-19/Chile/RM-199373/2021 | I | 1751 | A | 3 | 20211227 |
| EPI_ISL_12658809 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1323/2022 | I | 1751 | insRHstopC | 7 | 20220105 |
| EPI_ISL_17372580 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2625/2023 | L | 1752 | T | 18 | 20230120 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1752 | D | 1 | 20220210 |
| EPI_ISL_18139469 | NSP3 | hCoV-19/Egypt/CPHL-EGY23978/2022 | L | 1752 | R | 6 | 20220814 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | L | 1752 | insCYstop | 7 | 20230401 |
| EPI_ISL_12223840 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0833/2022 | L | 1752 | S | 2 | 20220127 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | L | 1752 | Y | 15 | 20230421 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1752 | G | 1 | 20201214 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | L | 1752 | C | 27 | 20240828 |
| EPI_ISL_15251334 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL-2188/2022 | L | 1752 | Q | 12 | 20220906 |
| EPI_ISL_19718821 | NSP3 | hCoV-19/Hong Kong/VB25037766/2025 | L | 1752 | M | 563 | 20250129 |
| EPI_ISL_10121638 | NSP3 | hCoV-19/Turkey/HSGM-F19964/2022 | L | 1752 | P | 14 | 20220124 |
| EPI_ISL_11947407 | NSP3 | hCoV-19/England/DHSC-CYNQWMC/2022 | L | 1752 | insM | 1 | 20220201 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | L | 1752 | V | 22 | 20230401 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | L | 1752 | del | 75 | 20230217 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | L | 1752 | K | 2 | 20210518 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | L | 1752 | I | 5 | 20230217 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | L | 1752 | N | 5 | 20210928 |
| EPI_ISL_18936254 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00158/2023 | L | 1753 | C | 11 | 20230421 |
| EPI_ISL_18139469 | NSP3 | hCoV-19/Egypt/CPHL-EGY23978/2022 | L | 1753 | F | 5 | 20220814 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | L | 1753 | A | 1 | 20211203 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | L | 1753 | K | 2 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1753 | N | 2 | 20220210 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | L | 1753 | stop | 3 | 20211229 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | L | 1753 | H | 4 | 20210927 |
| EPI_ISL_11952531 | NSP3 | hCoV-19/England/DHSC-CYYHGJD/2022 | L | 1753 | insASFYWIstopLRLstop | 1 | 20220217 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | L | 1753 | M | 15 | 20230104 |
| EPI_ISL_8166906 | NSP3 | hCoV-19/USA/ID-IBL-776352/2021 | L | 1753 | Y | 4 | 20211213 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | L | 1753 | del | 39 | 20230217 |
| EPI_ISL_11947967 | NSP3 | hCoV-19/England/DHSC-CYNT9PS/2022 | L | 1753 | insA | 1 | 20220205 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | L | 1753 | T | 1 | 20210806 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | L | 1753 | I | 22 | 20230401 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | L | 1753 | S | 3 | 20210518 |
| EPI_ISL_8146245 | NSP3 | hCoV-19/Sweden/UUH-500000036634SP/2021 | L | 1753 | insYstopIRHstopC | 2 | 20211209 |
| EPI_ISL_15741252 | NSP3 | hCoV-19/England/PHEC-YY8MOAN/2022 | L | 1753 | J | 1 | 20221026 |
| EPI_ISL_17429338 | NSP3 | hCoV-19/USA/TX-CDC-QDX48365525/2023 | L | 1753 | V | 143 | 20230323 |
| EPI_ISL_19817591 | NSP3 | hCoV-19/Brazil/PE-LACENPE-261913077/2025 | L | 1754 | I | 589 | 20250212 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | L | 1754 | insV | 1 | 20210806 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | L | 1754 | A | 1 | 20210928 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | L | 1754 | R | 8 | 20230401 |
| EPI_ISL_15306535 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-116535/2022 | L | 1754 | P | 5 | 20220926 |
| EPI_ISL_18720983 | NSP3 | hCoV-19/Japan/PG-586578/2023 | L | 1754 | V | 22 | 20231208 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | L | 1754 | H | 2 | 20210518 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | L | 1754 | del | 34 | 20230217 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | L | 1754 | N | 2 | 20210419 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | L | 1754 | insRF | 2 | 20211012 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | L | 1754 | F | 2 | 20210815 |
| EPI_ISL_8166906 | NSP3 | hCoV-19/USA/ID-IBL-776352/2021 | L | 1754 | M | 4 | 20211213 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | L | 1754 | T | 42 | 20210813 |
| EPI_ISL_17021247 | NSP3 | hCoV-19/Chile/RM-199373/2021 | L | 1754 | S | 3 | 20211227 |
| EPI_ISL_18622051 | NSP3 | hCoV-19/USA/MN-CDC-VSX-A07642/2023 | L | 1754 | J | 12 | 20231101 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | L | 1754 | C | 1 | 20210921 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | L | 1754 | stop | 6 | 20210927 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | L | 1754 | Q | 3 | 20230307 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | L | 1754 | K | 2 | 20210622 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | L | 1754 | Y | 6 | 20210328 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | D | 1755 | F | 1 | 20201214 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | D | 1755 | C | 8 | 20210927 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | D | 1755 | L | 5 | 20230217 |
| EPI_ISL_18577680 | NSP3 | hCoV-19/France/HDF-IPP28403/2023 | D | 1755 | A | 10 | 20231120 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | D | 1755 | H | 23 | 20230401 |
| EPI_ISL_10951241 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9166/2022 | D | 1755 | T | 1 | 20220210 |
| EPI_ISL_19239362 | NSP3 | hCoV-19/England/CLIMB-CM7YRACD/2024 | D | 1755 | E | 367 | 20240417 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | D | 1755 | Q | 32 | 20240828 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | D | 1755 | del | 56 | 20230401 |
| EPI_ISL_11026380 | NSP3 | hCoV-19/Denmark/DCGC-420501/2022 | D | 1755 | Y | 11 | 20220307 |
| EPI_ISL_19683156 | NSP3 | hCoV-19/Canada/AB-ABPHL-129813/2024 | D | 1755 | N | 234 | 20241028 |
| EPI_ISL_18267301 | NSP3 | hCoV-19/USA/DC-CDC-VSX-A356607/2023 | D | 1755 | B | 10 | 20230828 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | D | 1755 | R | 45 | 20211229 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | D | 1755 | V | 9 | 20230307 |
| EPI_ISL_19058093 | NSP3 | hCoV-19/env/Ukraine/85289/2024 | D | 1755 | G | 33 | 20240307 |
| EPI_ISL_13857951 | NSP3 | hCoV-19/India/GJ-ICMR-MCL-21-1048-3729-P1/2021 | D | 1755 | stop | 2 | 20210219 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | D | 1755 | S | 2 | 20221226 |
| EPI_ISL_8146245 | NSP3 | hCoV-19/Sweden/UUH-500000036634SP/2021 | D | 1755 | M | 2 | 20211209 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | D | 1755 | I | 1 | 20210419 |
| EPI_ISL_9924075 | NSP3 | hCoV-19/USA/GA-EVTL12253/2022 | Q | 1756 | Z | 3 | 20220128 |
| EPI_ISL_3421721 | NSP3 | hCoV-19/England/OXON-FA73E5/2020 | Q | 1756 | M | 1 | 20201122 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | Q | 1756 | insstop | 1 | 20211229 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 1756 | C | 1 | 20210318 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | Q | 1756 | stop | 13 | 20230401 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | Q | 1756 | G | 2 | 20210525 |
| EPI_ISL_603121 | NSP3 | hCoV-19/Lithuania/MR-LUHS-Eilnr66/2020 | Q | 1756 | P | 1 | 20200412 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | Q | 1756 | S | 75 | 20240828 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | Q | 1756 | N | 4 | 20230217 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | Q | 1756 | del | 57 | 20230401 |
| EPI_ISL_18845131 | NSP3 | hCoV-19/Japan/PG-564582/2023 | Q | 1756 | E | 435 | 20230818 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1756 | V | 1 | 20220210 |
| EPI_ISL_19488948 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-05J-MM00045S/2024 | Q | 1756 | L | 70 | 20241005 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | Q | 1756 | Y | 4 | 20210328 |
| EPI_ISL_19555114 | NSP3 | hCoV-19/Hong Kong/VB24345416/2024 | Q | 1756 | H | 1660 | 20241109 |
| EPI_ISL_18548121 | NSP3 | hCoV-19/USA/NY-CDC-QDX87530263/2023 | Q | 1756 | K | 102 | 20231110 |
| EPI_ISL_19712237 | NSP3 | hCoV-19/Australia/QLD0x01512F/2025 | Q | 1756 | R | 630 | 20250118 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | Q | 1756 | I | 3 | 20210518 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | A | 1757 | H | 3 | 20211115 |
| EPI_ISL_19255721 | NSP3 | hCoV-19/Hong Kong/CUHK-NC10900/2022 | A | 1757 | G | 7 | 20220720 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | A | 1757 | L | 9 | 20230217 |
| EPI_ISL_19744594 | NSP3 | hCoV-19/Singapore/Y25R8MSC48/2025 | A | 1757 | V | 597 | 20250218 |
| EPI_ISL_8813083 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-092721-1198/2021 | A | 1757 | M | 4 | 20210927 |
| EPI_ISL_19704678 | NSP3 | hCoV-19/Ireland/D-NVRL-GIRL00005779/2025 | A | 1757 | T | 704 | 20250115 |
| EPI_ISL_19376571 | NSP3 | hCoV-19/env/Brazil/RJ-LVCA-WWTP_C2/2021 | A | 1757 | insQEI | 1 | 20210430 |
| EPI_ISL_19309173 | NSP3 | hCoV-19/Spain/PV-HUD-97029853/2024 | A | 1757 | S | 147 | 20240726 |
| EPI_ISL_6262413 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-012121-721/2021 | A | 1757 | insLC | 1 | 20210121 |
| EPI_ISL_18782149 | NSP3 | hCoV-19/Turkey/HSGM-AA001337/2023 | A | 1757 | E | 7 | 20231017 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | A | 1757 | del | 42 | 20230401 |
| EPI_ISL_2903146 | NSP3 | hCoV-19/England/OXON-F88669/2021 | A | 1757 | stop | 5 | 20210622 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1757 | Y | 1 | 20220210 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | A | 1757 | K | 1 | 20210805 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | A | 1757 | R | 7 | 20230217 |
| EPI_ISL_3801323 | NSP3 | hCoV-19/Thailand/Songkhla_SEQ14646/2021 | A | 1757 | P | 3 | 20210808 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | A | 1757 | N | 6 | 20230104 |
| EPI_ISL_922193 | NSP3 | hCoV-19/England/OXON-F4EFBF/2021 | A | 1757 | Q | 1 | 20210107 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | A | 1757 | C | 9 | 20230401 |
| EPI_ISL_19243761 | NSP3 | hCoV-19/France/CVL-IPP06922/2024 | L | 1758 | F | 59 | 20240617 |
| EPI_ISL_19431735 | NSP3 | hCoV-19/env/Germany/BY-LGL-6341183/2024 | L | 1758 | Y | 39 | 20240828 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | L | 1758 | R | 1 | 20230217 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | L | 1758 | D | 2 | 20210928 |
| EPI_ISL_17885433 | NSP3 | hCoV-19/Brazil/MS-REDE-65/2022 | L | 1758 | A | 4 | 20220128 |
| EPI_ISL_10082240 | NSP3 | hCoV-19/USA/WI-ASC-210586838/2022 | L | 1758 | stop | 1 | 20220107 |
| EPI_ISL_3178548 | NSP3 | hCoV-19/England/OXON-FA411B/2021 | L | 1758 | insKN | 1 | 20210714 |
| EPI_ISL_10070682 | NSP3 | hCoV-19/USA/LA-EVTL12435/2022 | L | 1758 | J | 1 | 20220201 |
| EPI_ISL_19083201 | NSP3 | hCoV-19/Argentina/INEI126809/2024 | L | 1758 | I | 36 | 20240323 |
| EPI_ISL_10951241 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9166/2022 | L | 1758 | G | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1758 | K | 1 | 20210318 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | L | 1758 | del | 43 | 20230401 |
| EPI_ISL_17454452 | NSP3 | hCoV-19/Puerto Rico/RCMI-ADMV6CLU/2022 | L | 1758 | S | 4 | 20221215 |
| EPI_ISL_18709716 | NSP3 | hCoV-19/USA/IL-C23WGS3642/2023 | L | 1758 | V | 15 | 20231204 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | L | 1758 | T | 4 | 20230101 |
| EPI_ISL_8804033 | NSP3 | hCoV-19/India/GA-NCCS-211990064/2021 | L | 1758 | M | 3 | 20210718 |
| EPI_ISL_13857951 | NSP3 | hCoV-19/India/GJ-ICMR-MCL-21-1048-3729-P1/2021 | L | 1758 | H | 2 | 20210219 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | V | 1759 | I | 7 | 20230217 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | V | 1759 | Q | 2 | 20210805 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1759 | Y | 2 | 20201214 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | V | 1759 | R | 2 | 20210813 |
| EPI_ISL_19829497 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022677_01/2025 | V | 1759 | M | 263 | 20250205 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | V | 1759 | K | 4 | 20230104 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | V | 1759 | del | 43 | 20230401 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | V | 1759 | S | 14 | 20220814 |
| EPI_ISL_18892561 | NSP3 | hCoV-19/Canada/BC-BCCDC-698309/2024 | V | 1759 | A | 91 | 20240125 |
| EPI_ISL_13857951 | NSP3 | hCoV-19/India/GJ-ICMR-MCL-21-1048-3729-P1/2021 | V | 1759 | stop | 2 | 20210219 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1759 | T | 4 | 20220210 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | V | 1759 | C | 1 | 20210921 |
| EPI_ISL_18208247 | NSP3 | hCoV-19/Japan/RIMD27477/2023 | V | 1759 | E | 1 | 20230802 |
| EPI_ISL_19470987 | NSP3 | hCoV-19/Bahrain/PHD-24020059281_S88/2024 | V | 1759 | G | 1427 | 20240324 |
| EPI_ISL_3178850 | NSP3 | hCoV-19/England/OXON-FA5FE3/2021 | V | 1759 | F | 2 | 20210716 |
| EPI_ISL_19614455 | NSP3 | hCoV-19/Australia/QLD0x014ED8/2024 | V | 1759 | L | 351 | 20241128 |
| EPI_ISL_18268985 | NSP3 | hCoV-19/USA/MS-MSPHL-0513/2023 | S | 1760 | T | 29 | 20230807 |
| EPI_ISL_19762099 | NSP3 | hCoV-19/Spain/PV-HUB-50933904/2025 | S | 1760 | A | 111 | 20250102 |
| EPI_ISL_922221 | NSP3 | hCoV-19/England/OXON-F506E2/2021 | S | 1760 | E | 1 | 20210110 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | S | 1760 | N | 14 | 20230217 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | S | 1760 | stop | 1 | 20210813 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | S | 1760 | W | 1 | 20210518 |
| EPI_ISL_8803757 | NSP3 | hCoV-19/India/MH-NCCS-56265/2021 | S | 1760 | I | 6 | 20210809 |
| EPI_ISL_8804033 | NSP3 | hCoV-19/India/GA-NCCS-211990064/2021 | S | 1760 | M | 1 | 20210718 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | S | 1760 | del | 47 | 20230401 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | S | 1760 | R | 7 | 20230217 |
| EPI_ISL_10826593 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-87298/2022 | S | 1760 | insTYTVTRSDT | 1 | 20220129 |
| EPI_ISL_17965842 | NSP3 | hCoV-19/USA/CA-CDPH-6000015513/2023 | S | 1760 | C | 6 | 20230414 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | S | 1760 | K | 5 | 20230217 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1760 | L | 12 | 20230401 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | S | 1760 | Q | 4 | 20210805 |
| EPI_ISL_8193599 | NSP3 | hCoV-19/Egypt/NRC-6657/2020 | S | 1760 | insTYTVTRSGISA | 3 | 20200910 |
| EPI_ISL_19771445 | NSP3 | hCoV-19/USA/SC-SCDHEC-0004/2025 | S | 1760 | F | 805 | 20250203 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | S | 1760 | V | 3 | 20210806 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | S | 1760 | H | 1 | 20201214 |
| EPI_ISL_16357321 | NSP3 | hCoV-19/Switzerland/ZH-UZH-IMV-46f14f76/2022 | S | 1760 | P | 30 | 20221207 |
| EPI_ISL_19594728 | NSP3 | hCoV-19/Yunnan/YNCDC-2253/2024 | S | 1760 | Y | 87 | 20240815 |
| EPI_ISL_17021247 | NSP3 | hCoV-19/Chile/RM-199373/2021 | S | 1760 | G | 1 | 20211227 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | D | 1761 | L | 2 | 20220814 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | D | 1761 | K | 3 | 20210804 |
| EPI_ISL_11737574 | NSP3 | hCoV-19/India/KA-SLS-SEQ-10163/2021 | D | 1761 | I | 1 | 20211019 |
| EPI_ISL_19022644 | NSP3 | hCoV-19/Canary Islands/HUGCDN-04365411/2024 | D | 1761 | V | 30 | 20240224 |
| EPI_ISL_10213133 | NSP3 | hCoV-19/USA/TN-ASC-210537727/2022 | D | 1761 | M | 6 | 20220118 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | D | 1761 | del | 52 | 20230401 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | D | 1761 | F | 3 | 20210525 |
| EPI_ISL_18382185 | NSP3 | hCoV-19/South Korea/KDCA267255/2023 | D | 1761 | S | 23 | 20230920 |
| EPI_ISL_18959766 | NSP3 | hCoV-19/Colombia/DC-LSPSDS-41024/2023 | D | 1761 | E | 20 | 20230917 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 1761 | R | 3 | 20230101 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | D | 1761 | stop | 3 | 20210921 |
| EPI_ISL_3079032 | NSP3 | hCoV-19/England/OXON-FA2933/2021 | D | 1761 | insYT | 1 | 20210705 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | D | 1761 | H | 14 | 20230104 |
| EPI_ISL_19679936 | NSP3 | hCoV-19/USA/MN-MDH-45287/2024 | D | 1761 | N | 235 | 20241230 |
| EPI_ISL_14552661 | NSP3 | hCoV-19/USA/TX-HMH-M-111856/2022 | D | 1761 | insYTVTRSGISVY | 1 | 20220810 |
| EPI_ISL_19629269 | NSP3 | hCoV-19/USA/CA-CDPH-500144845/2024 | D | 1761 | G | 6490 | 20241119 |
| EPI_ISL_18276966 | NSP3 | hCoV-19/USA/CA-CCPHL-5326/2023 | D | 1761 | Y | 55 | 20230828 |
| EPI_ISL_16094886 | NSP3 | hCoV-19/England/LSPA-32611B75/2022 | D | 1761 | B | 5 | 20221206 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | D | 1761 | T | 26 | 20230401 |
| EPI_ISL_19451188 | NSP3 | hCoV-19/Sweden/O-24-DH-6062/2024 | D | 1761 | A | 204 | 20240917 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | D | 1761 | Q | 4 | 20211012 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | D | 1761 | insY | 4 | 20230401 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | V | 1762 | C | 3 | 20210805 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1762 | H | 1 | 20210318 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | V | 1762 | Y | 14 | 20220210 |
| EPI_ISL_8619220 | NSP3 | hCoV-19/Germany/NI-IOV-60392996/2022 | V | 1762 | insEVT | 2 | 20220107 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | V | 1762 | stop | 1 | 20230117 |
| EPI_ISL_17031794 | NSP3 | hCoV-19/Hebei/ZJK-95/2023 | V | 1762 | G | 49 | 20230130 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | V | 1762 | T | 11 | 20230401 |
| EPI_ISL_19656913 | NSP3 | hCoV-19/Germany/BE-RKI-I-1147012/2024 | V | 1762 | F | 1982 | 20241210 |
| EPI_ISL_19802266 | NSP3 | hCoV-19/USA/CA-LACPHL-AY10974/2025 | V | 1762 | I | 548 | 20250317 |
| EPI_ISL_8619216 | NSP3 | hCoV-19/Germany/NI-IOV-60393360/2022 | V | 1762 | insEVS | 1 | 20220108 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | V | 1762 | insTVTRS | 3 | 20211102 |
| EPI_ISL_19594728 | NSP3 | hCoV-19/Yunnan/YNCDC-2253/2024 | V | 1762 | D | 10 | 20240815 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | V | 1762 | P | 1 | 20210525 |
| EPI_ISL_19629468 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422193771/2024 | V | 1762 | L | 26 | 20241027 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | V | 1762 | del | 49 | 20230401 |
| EPI_ISL_19223022 | NSP3 | hCoV-19/USA/CA-CDPH-500137641/2024 | V | 1762 | A | 129 | 20240502 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | V | 1762 | W | 2 | 20211012 |
| EPI_ISL_3793004 | NSP3 | hCoV-19/Sweden/15854245P/2021 | V | 1762 | insstopCWstopstop | 4 | 20210328 |
| EPI_ISL_3715166 | NSP3 | hCoV-19/Germany/BY-RKI-I-206062/2021 | V | 1762 | N | 5 | 20210810 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | V | 1762 | S | 6 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1762 | E | 1 | 20220210 |
| EPI_ISL_10667120 | NSP3 | hCoV-19/South Africa/NICD-N34795/2022 | G | 1763 | R | 3 | 20220127 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | G | 1763 | W | 4 | 20211203 |
| EPI_ISL_11737574 | NSP3 | hCoV-19/India/KA-SLS-SEQ-10163/2021 | G | 1763 | I | 1 | 20211019 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | G | 1763 | stop | 1 | 20230117 |
| EPI_ISL_16284105 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223292480/2022 | G | 1763 | insLMCQPILLLXXXXXXXXX | 1 | 20221125 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | G | 1763 | T | 10 | 20220210 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | G | 1763 | K | 5 | 20230217 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | G | 1763 | insstopstopC | 2 | 20211203 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | G | 1763 | Q | 5 | 20230104 |
| EPI_ISL_19788352 | NSP3 | hCoV-19/Japan/FR302-0161/2025 | G | 1763 | D | 103 | 20250204 |
| EPI_ISL_19643412 | NSP3 | hCoV-19/USA/TX-HMH-M-146866/2024 | G | 1763 | C | 176 | 20241105 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | G | 1763 | N | 1 | 20210525 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | G | 1763 | del | 60 | 20230401 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | G | 1763 | insstop | 1 | 20210805 |
| EPI_ISL_19473229 | NSP3 | hCoV-19/USA/NY-CDC-QDX24124940/2024 | G | 1763 | S | 341 | 20240923 |
| EPI_ISL_17713354 | NSP3 | hCoV-19/Sweden/C-03_SE600_500000113879SP/2022 | G | 1763 | insXX | 3 | 20220929 |
| EPI_ISL_2903010 | NSP3 | hCoV-19/England/OXON-F877C1/2020 | G | 1763 | F | 2 | 20201123 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | G | 1763 | A | 5 | 20230307 |
| EPI_ISL_19197871 | NSP3 | hCoV-19/Japan/FR012-0165/2024 | G | 1763 | V | 24 | 20240515 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1763 | H | 2 | 20220210 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | G | 1763 | insVTRSGISVstopCWstopstopC | 1 | 20220210 |
| EPI_ISL_19193637 | NSP3 | hCoV-19/France/CVL-ChuTo-291705/2024 | D | 1764 | del | 71 | 20240416 |
| EPI_ISL_19661855 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YEDH1/2024 | D | 1764 | G | 1057 | 20241128 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | D | 1764 | I | 14 | 20230101 |
| EPI_ISL_17195509 | NSP3 | hCoV-19/Sweden/SUS0020874/2023 | D | 1764 | B | 11 | 20230228 |
| EPI_ISL_15709651 | NSP3 | hCoV-19/env/USA/CA-SEARCH-91775/2022 | D | 1764 | H | 3 | 20220515 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1764 | S | 10 | 20220210 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | D | 1764 | L | 1 | 20210804 |
| EPI_ISL_19394052 | NSP3 | hCoV-19/USA/WI-WSLH-2401551/2024 | D | 1764 | E | 43 | 20240625 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | D | 1764 | stop | 3 | 20220814 |
| EPI_ISL_17091799 | NSP3 | hCoV-19/South Korea/KDCA216436/2023 | D | 1764 | V | 43 | 20230210 |
| EPI_ISL_11336290 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL0476/2021 | D | 1764 | Q | 1 | 20211218 |
| EPI_ISL_19793978 | NSP3 | hCoV-19/Australia/QLD0x0153BA/2025 | D | 1764 | N | 195 | 20250306 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | D | 1764 | T | 8 | 20230401 |
| EPI_ISL_19363264 | NSP3 | hCoV-19/New Zealand/24YA5986/2024 | D | 1764 | A | 186 | 20240710 |
| EPI_ISL_18257306 | NSP3 | hCoV-19/USA/CA_SCCPHL_280452/2023 | D | 1764 | Y | 10 | 20230808 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | D | 1764 | R | 4 | 20211229 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | D | 1764 | K | 5 | 20230117 |
| EPI_ISL_5384575 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-49794/2020 | S | 1765 | insVstopCWstopstop | 1 | 20200716 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | S | 1765 | K | 3 | 20211229 |
| EPI_ISL_7507374 | NSP3 | hCoV-19/USA/CA-CSMC24/2021 | S | 1765 | Y | 1 | 20210525 |
| EPI_ISL_19766983 | NSP3 | hCoV-19/USA/TX-USAFSAM-S23424/2025 | S | 1765 | R | 329 | 20250108 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | S | 1765 | D | 1 | 20210419 |
| EPI_ISL_19820206 | NSP3 | hCoV-19/USA/NY-PRL-250401_81F11/2025 | S | 1765 | N | 413 | 20250310 |
| EPI_ISL_19565452 | NSP3 | hCoV-19/France/ARA-HCL024172578301/2024 | S | 1765 | G | 164 | 20241106 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | S | 1765 | L | 4 | 20210928 |
| EPI_ISL_14606917 | NSP3 | hCoV-19/England/LSPA-3F426AE/2022 | S | 1765 | insA | 4 | 20220727 |
| EPI_ISL_17563655 | NSP3 | hCoV-19/South Korea/KDCA230388/2023 | S | 1765 | T | 93 | 20230405 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | S | 1765 | A | 3 | 20210115 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | S | 1765 | E | 1 | 20220814 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | S | 1765 | F | 1 | 20210518 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | S | 1765 | Q | 3 | 20230104 |
| EPI_ISL_17544875 | NSP3 | hCoV-19/Czech Republic/NRL-s1548/2023 | S | 1765 | C | 98 | 20230320 |
| EPI_ISL_8470720 | NSP3 | hCoV-19/USA/GA-CDC-ASC210638271/2021 | S | 1765 | M | 2 | 20211221 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1765 | V | 15 | 20230401 |
| EPI_ISL_6944289 | NSP3 | hCoV-19/Germany/NI-IOV-60374315/2021 | S | 1765 | H | 1 | 20211127 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | S | 1765 | del | 63 | 20230401 |
| EPI_ISL_19618095 | NSP3 | hCoV-19/USA/WI-WSLH-2402267/2024 | S | 1765 | I | 50 | 20240826 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | S | 1765 | stop | 1 | 20210921 |
| EPI_ISL_3421812 | NSP3 | hCoV-19/England/OXON-FA7FE1/2020 | S | 1765 | P | 1 | 20201229 |
| EPI_ISL_5007256 | NSP3 | hCoV-19/South Korea/KDCA12642/2021 | A | 1766 | stop | 2 | 20210825 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | A | 1766 | C | 15 | 20220210 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | A | 1766 | insstopCWstopstopC | 1 | 20211102 |
| EPI_ISL_19470025 | NSP3 | hCoV-19/Ukraine/87138/2024 | A | 1766 | M | 2 | 20240814 |
| EPI_ISL_19784422 | NSP3 | hCoV-19/New Zealand/25YA0686/2025 | A | 1766 | T | 684 | 20250303 |
| EPI_ISL_19414455 | NSP3 | hCoV-19/Israel/SMC-7118300/2024 | A | 1766 | S | 140 | 20240825 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | A | 1766 | L | 7 | 20230217 |
| EPI_ISL_11930172 | NSP3 | hCoV-19/England/DHSC-CYBJOGF/2022 | A | 1766 | insstopCWRX | 1 | 20220112 |
| EPI_ISL_9314411 | NSP3 | hCoV-19/Israel/ICH-741116081/2022 | A | 1766 | insGD | 1 | 20220122 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | A | 1766 | del | 74 | 20230217 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | A | 1766 | I | 5 | 20230117 |
| EPI_ISL_12007693 | NSP3 | hCoV-19/Israel/ICH-741215354/2022 | A | 1766 | insGDK | 3 | 20220401 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 1766 | insstopCWstopstopCGSCSstop | 1 | 20230101 |
| EPI_ISL_13230427 | NSP3 | hCoV-19/USA/NJ-GBW-000436/2022 | A | 1766 | P | 8 | 20220526 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | A | 1766 | insG | 1 | 20211115 |
| EPI_ISL_18942462 | NSP3 | hCoV-19/USA/NY-CDC-QDX92473526/2024 | A | 1766 | G | 31 | 20240206 |
| EPI_ISL_17685623 | NSP3 | hCoV-19/Italy/LOM-ASST_80229145SUA/2023 | A | 1766 | E | 67 | 20230515 |
| EPI_ISL_16258469 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2072/2022 | A | 1766 | F | 8 | 20220811 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | A | 1766 | W | 1 | 20210803 |
| EPI_ISL_3756617 | NSP3 | hCoV-19/USA/ID-IBL-744756/2021 | A | 1766 | insGSCSstop | 1 | 20210801 |
| EPI_ISL_13282063 | NSP3 | hCoV-19/USA/ID-IBL-656335/2020 | A | 1766 | insstopCWstopstopWKL | 1 | 20200915 |
| EPI_ISL_19827103 | NSP3 | hCoV-19/Chile/AR-ISPC-25928/2025 | A | 1766 | V | 11936 | 20250322 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | A | 1766 | R | 39 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1766 | H | 1 | 20220210 |
| EPI_ISL_12145163 | NSP3 | hCoV-19/Turkey/HSGM-G8402/2022 | A | 1766 | K | 3 | 20220312 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | A | 1766 | insstopCWstopstopW | 1 | 20200729 |
| EPI_ISL_19687704 | NSP3 | hCoV-19/USA/NY-PRL-250108_81H06/2024 | E | 1767 | D | 462 | 20241229 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | E | 1767 | I | 2 | 20211227 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | E | 1767 | N | 13 | 20230117 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | E | 1767 | S | 16 | 20220210 |
| EPI_ISL_18321580 | NSP3 | hCoV-19/Ireland/D-SVUH-FAX24627-062/2023 | E | 1767 | A | 189 | 20230925 |
| EPI_ISL_3421812 | NSP3 | hCoV-19/England/OXON-FA7FE1/2020 | E | 1767 | T | 1 | 20201229 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | E | 1767 | del | 48 | 20230217 |
| EPI_ISL_19693749 | NSP3 | hCoV-19/USA/NY-GBW-GKPLAAAA40598/2025 | E | 1767 | K | 729 | 20250120 |
| EPI_ISL_6599852 | NSP3 | hCoV-19/Thailand/19832/2021 | E | 1767 | Y | 1 | 20211030 |
| EPI_ISL_19656155 | NSP3 | hCoV-19/Spain/CT-HUGTiP-G1R201/2024 | E | 1767 | G | 198 | 20241227 |
| EPI_ISL_16407563 | NSP3 | hCoV-19/England/BRBR-3263E29B/2022 | E | 1767 | Z | 2 | 20221215 |
| EPI_ISL_16013640 | NSP3 | hCoV-19/env/USA/CA-SEARCH-207917/2022 | E | 1767 | Q | 14 | 20220915 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | E | 1767 | H | 3 | 20211012 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | E | 1767 | R | 10 | 20220104 |
| EPI_ISL_19032951 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6372/2024 | E | 1767 | stop | 19 | 20240127 |
| EPI_ISL_11952608 | NSP3 | hCoV-19/England/DHSC-CYYHPA7/2022 | E | 1767 | insETGLLMP | 1 | 20220124 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | E | 1767 | insAKHstop | 1 | 20220210 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | E | 1767 | P | 3 | 20230217 |
| EPI_ISL_9471621 | NSP3 | hCoV-19/USA/ID-IBL-787838/2022 | E | 1767 | insG | 7 | 20220112 |
| EPI_ISL_1051618 | NSP3 | hCoV-19/England/OXON-F6187F/2021 | E | 1767 | insGISVstopCstop | 1 | 20210126 |
| EPI_ISL_7410946 | NSP3 | hCoV-19/USA/IL-CDC-ASC210457006/2021 | E | 1767 | insGEVASTD | 1 | 20211112 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | E | 1767 | L | 4 | 20210921 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | E | 1767 | insstop | 2 | 20211012 |
| EPI_ISL_18504310 | NSP3 | hCoV-19/Canada/ON-PHL-23-39944/2023 | E | 1767 | V | 40 | 20231103 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | E | 1767 | C | 2 | 20210419 |
| EPI_ISL_19549050 | NSP3 | hCoV-19/Canada/AB-ABPHL-126523/2024 | V | 1768 | I | 268 | 20241031 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | V | 1768 | M | 4 | 20210921 |
| EPI_ISL_16258473 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1978/2022 | V | 1768 | C | 4 | 20220814 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | V | 1768 | stop | 9 | 20220210 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1768 | K | 3 | 20220210 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | V | 1768 | S | 3 | 20211102 |
| EPI_ISL_19416858 | NSP3 | hCoV-19/USA/UT-UPHL-240913231848/2024 | V | 1768 | A | 66 | 20240903 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 1768 | E | 1 | 20220812 |
| EPI_ISL_17963123 | NSP3 | hCoV-19/env/Germany/BY-LGL-5900423/2023 | V | 1768 | L | 74 | 20230522 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | V | 1768 | P | 1 | 20211227 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | V | 1768 | del | 40 | 20230217 |
| EPI_ISL_18878804 | NSP3 | hCoV-19/USA/IL-RIPHL_122640_G/2024 | V | 1768 | F | 224 | 20240122 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | V | 1768 | N | 1 | 20210419 |
| EPI_ISL_5278678 | NSP3 | hCoV-19/Japan/20210923-37547/2021 | V | 1768 | R | 1 | 20210928 |
| EPI_ISL_19406609 | NSP3 | hCoV-19/Bangladesh/icddrb-HCWC-02050767/2023 | V | 1768 | G | 331 | 20230612 |
| EPI_ISL_14246012 | NSP3 | hCoV-19/Switzerland/SO-ETHZ-38088145/2022 | V | 1768 | D | 52 | 20220718 |
| EPI_ISL_12362072 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-13239/2022 | A | 1769 | K | 6 | 20220317 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | A | 1769 | C | 2 | 20210813 |
| EPI_ISL_19774716 | NSP3 | hCoV-19/Slovenia/1002796/2025 | A | 1769 | S | 223 | 20250101 |
| EPI_ISL_16258469 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2072/2022 | A | 1769 | F | 1 | 20220811 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | A | 1769 | P | 11 | 20211228 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | A | 1769 | stop | 2 | 20230101 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1769 | I | 2 | 20220210 |
| EPI_ISL_3421812 | NSP3 | hCoV-19/England/OXON-FA7FE1/2020 | A | 1769 | insY | 1 | 20201229 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | A | 1769 | N | 9 | 20230217 |
| EPI_ISL_19817935 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U840-1/2025 | A | 1769 | V | 5337 | 20250314 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 1769 | L | 5 | 20221229 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | A | 1769 | insstopN | 1 | 20210804 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | A | 1769 | del | 41 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 1769 | G | 2 | 20210318 |
| EPI_ISL_17963123 | NSP3 | hCoV-19/env/Germany/BY-LGL-5900423/2023 | A | 1769 | Q | 59 | 20230522 |
| EPI_ISL_10547151 | NSP3 | hCoV-19/USA/TN-ASC-210588892/2022 | A | 1769 | Y | 1 | 20220110 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | A | 1769 | R | 1 | 20210807 |
| EPI_ISL_19738506 | NSP3 | hCoV-19/Chile/AN-6756/2025 | A | 1769 | T | 381 | 20250119 |
| EPI_ISL_12321724 | NSP3 | hCoV-19/Turkey/HSGM-GS2536/2022 | A | 1769 | E | 8 | 20220405 |
| EPI_ISL_17268819 | NSP3 | hCoV-19/Sweden/03_SE600_000200518927N2/2023 | A | 1769 | insXX | 1 | 20230109 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | A | 1769 | M | 1 | 20220812 |
| EPI_ISL_19706753 | NSP3 | hCoV-19/Italy/LOM_Niguarda_45195293PER/2025 | V | 1770 | L | 483 | 20250201 |
| EPI_ISL_8083713 | NSP3 | hCoV-19/USA/LA-OD-3526012/2021 | V | 1770 | insVRstop | 1 | 20211213 |
| EPI_ISL_11354909 | NSP3 | hCoV-19/France/GES-ChNa-990000083167/2021 | V | 1770 | insXXX | 1 | 20210724 |
| EPI_ISL_13576102 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-10666/2022 | V | 1770 | S | 1 | 20220608 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | V | 1770 | insstopCWstopstopCGSYSstopNVstopCLRstop | 1 | 20210802 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | V | 1770 | insstopCWstopstopCGSCSstopNVstopCLRstop | 4 | 20230401 |
| EPI_ISL_8619223 | NSP3 | hCoV-19/Germany/NI-IOV-60392970/2022 | V | 1770 | stop | 8 | 20220107 |
| EPI_ISL_10858579 | NSP3 | hCoV-19/Turkey/HSGM-G2537/2022 | V | 1770 | D | 3 | 20220217 |
| EPI_ISL_16258469 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2072/2022 | V | 1770 | insWYVKSstopstop | 1 | 20220811 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | V | 1770 | M | 10 | 20211228 |
| EPI_ISL_19464160 | NSP3 | hCoV-19/USA/CA-SC-285540/2024 | V | 1770 | G | 6 | 20240729 |
| EPI_ISL_6357248 | NSP3 | hCoV-19/Romania/33055/2021 | V | 1770 | insstopCWstopstopCGSCSstopNVstopCLCstop | 1 | 20210104 |
| EPI_ISL_19661745 | NSP3 | hCoV-19/Italy/LOM_ASSTCREMONA_CRV-7201857/2024 | V | 1770 | A | 84 | 20241227 |
| EPI_ISL_19756329 | NSP3 | hCoV-19/Russia/SPE-RII-MH222729S/2024 | V | 1770 | F | 2626 | 20241209 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 1770 | del | 40 | 20230217 |
| EPI_ISL_19797809 | NSP3 | hCoV-19/Brazil/MG-LACENMG-312305721/2025 | V | 1770 | I | 395 | 20250305 |
| EPI_ISL_17952242 | NSP3 | hCoV-19/Spain/CT-LabRefCat-1852100/2023 | V | 1770 | T | 6 | 20230530 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1770 | K | 3 | 20220210 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | V | 1770 | N | 2 | 20211227 |
| EPI_ISL_16258469 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2072/2022 | V | 1770 | H | 2 | 20220811 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 1770 | Q | 1 | 20221229 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 1770 | P | 1 | 20220812 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1770 | C | 5 | 20230101 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | K | 1771 | G | 1 | 20210419 |
| EPI_ISL_4470112 | NSP3 | hCoV-19/India/DL-NCDC-330923/2021 | K | 1771 | insRSXXXX | 1 | 20210424 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1771 | T | 2 | 20220210 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | K | 1771 | insstop | 1 | 20211115 |
| EPI_ISL_15507741 | NSP3 | hCoV-19/Kuwait/Samples19/2022 | K | 1771 | N | 3 | 20220715 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | K | 1771 | I | 5 | 20230217 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | K | 1771 | V | 2 | 20220812 |
| EPI_ISL_10858480 | NSP3 | hCoV-19/Turkey/HSGM-G2324/2022 | K | 1771 | Q | 5 | 20220217 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | K | 1771 | L | 10 | 20230101 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | K | 1771 | F | 1 | 20211227 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | K | 1771 | E | 15 | 20230307 |
| EPI_ISL_12223840 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0833/2022 | K | 1771 | S | 2 | 20220127 |
| EPI_ISL_19799737 | NSP3 | hCoV-19/USA/TX-HMH-M-147670/2025 | K | 1771 | R | 7879 | 20250305 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | K | 1771 | Y | 6 | 20230401 |
| EPI_ISL_10858579 | NSP3 | hCoV-19/Turkey/HSGM-G2537/2022 | K | 1771 | stop | 19 | 20220217 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | K | 1771 | del | 37 | 20230217 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | M | 1772 | C | 41 | 20230401 |
| EPI_ISL_19826666 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528508/2025 | M | 1772 | I | 232 | 20250319 |
| EPI_ISL_19470179 | NSP3 | hCoV-19/env/Ukraine/84713/2024 | M | 1772 | V | 32 | 20240205 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | M | 1772 | D | 1 | 20201214 |
| EPI_ISL_19195378 | NSP3 | hCoV-19/env/Germany/BY-LGL-6256143/2024 | M | 1772 | N | 5 | 20240527 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | M | 1772 | A | 1 | 20210804 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | M | 1772 | K | 17 | 20220210 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | M | 1772 | stop | 3 | 20210813 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | M | 1772 | H | 2 | 20230117 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | M | 1772 | F | 2 | 20230307 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | M | 1772 | R | 9 | 20230101 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | M | 1772 | del | 38 | 20230217 |
| EPI_ISL_15895785 | NSP3 | hCoV-19/Russia/MOW-CRIE-96933/2022 | M | 1772 | S | 4 | 20220921 |
| EPI_ISL_16859246 | NSP3 | hCoV-19/USA/MI-MDHHS-SC43478/2022 | M | 1772 | T | 16 | 20221212 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | M | 1772 | Q | 2 | 20210807 |
| EPI_ISL_19137782 | NSP3 | hCoV-19/USA/CA-IVY-G43R71F2/2024 | M | 1772 | L | 49 | 20240114 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | F | 1773 | Y | 2 | 20210813 |
| EPI_ISL_16284089 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223160978/2022 | F | 1773 | insDAYVNTFSQPILLLDQALVSDVGDSAEVAVKMF | 1 | 20221112 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1773 | P | 1 | 20201214 |
| EPI_ISL_5522622 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-070221-713/2021 | F | 1773 | insstopstopCG | 2 | 20210702 |
| EPI_ISL_11925739 | NSP3 | hCoV-19/England/DHSC-CYB6677/2022 | F | 1773 | G | 2 | 20220126 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | F | 1773 | del | 39 | 20230217 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | F | 1773 | R | 2 | 20210921 |
| EPI_ISL_12934204 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1498/2022 | F | 1773 | W | 3 | 20220105 |
| EPI_ISL_8083713 | NSP3 | hCoV-19/USA/LA-OD-3526012/2021 | F | 1773 | M | 2 | 20211213 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1773 | D | 1 | 20220210 |
| EPI_ISL_16258469 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2072/2022 | F | 1773 | I | 4 | 20220811 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | F | 1773 | E | 1 | 20210403 |
| EPI_ISL_11932087 | NSP3 | hCoV-19/England/DHSC-CYBS4BK/2022 | F | 1773 | insCTHTGTG | 1 | 20220211 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | F | 1773 | stop | 2 | 20230101 |
| EPI_ISL_15262288 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL-2193/2022 | F | 1773 | V | 5 | 20220908 |
| EPI_ISL_19696513 | NSP3 | hCoV-19/Australia/SA2371748/2025 | F | 1773 | L | 233 | 20250108 |
| EPI_ISL_17488743 | NSP3 | hCoV-19/Tianjin/TJCDC-258-019/2023 | F | 1773 | C | 8 | 20230326 |
| EPI_ISL_12934204 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010522-1498/2022 | F | 1773 | insstopstopCGSCSstopNVstopCLRstop | 1 | 20220105 |
| EPI_ISL_13576102 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-G-10666/2022 | F | 1773 | S | 8 | 20220608 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | D | 1774 | R | 11 | 20220210 |
| EPI_ISL_18734294 | NSP3 | hCoV-19/Singapore/R95MR28/2023 | D | 1774 | B | 15 | 20231220 |
| EPI_ISL_19679043 | NSP3 | hCoV-19/USA/VA-VTVAS3-GSC46218/2024 | D | 1774 | Y | 995 | 20241230 |
| EPI_ISL_3421812 | NSP3 | hCoV-19/England/OXON-FA7FE1/2020 | D | 1774 | Q | 1 | 20201229 |
| EPI_ISL_19736119 | NSP3 | hCoV-19/Germany/BW-RKI-I-1147664/2025 | D | 1774 | N | 619 | 20250128 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | D | 1774 | del | 42 | 20230217 |
| EPI_ISL_19824646 | NSP3 | hCoV-19/USA/MI-MDHHS-SC45761/2025 | D | 1774 | G | 1473 | 20250315 |
| EPI_ISL_19253203 | NSP3 | hCoV-19/Scotland/CLIMB-CM7Y8EIP/2024 | D | 1774 | A | 192 | 20240613 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | D | 1774 | T | 4 | 20220812 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | D | 1774 | H | 5 | 20230307 |
| EPI_ISL_19044218 | NSP3 | hCoV-19/Canada/BC-BCCDC-706841/2024 | D | 1774 | S | 6 | 20240319 |
| EPI_ISL_19643235 | NSP3 | hCoV-19/Spain/CL-UCHV-49565/2024 | D | 1774 | E | 75 | 20241023 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1774 | P | 1 | 20210318 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | D | 1774 | M | 29 | 20230401 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | D | 1774 | F | 1 | 20201214 |
| EPI_ISL_19409702 | NSP3 | hCoV-19/France/NAQ-HCL724000396201/2024 | D | 1774 | V | 78 | 20240819 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | D | 1774 | insLQRMCPstopTM | 2 | 20220210 |
| EPI_ISL_12934306 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1526/2022 | D | 1774 | stop | 2 | 20220107 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | D | 1774 | L | 1 | 20211115 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | D | 1774 | K | 14 | 20211228 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | D | 1774 | I | 7 | 20230401 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | A | 1775 | C | 8 | 20230117 |
| EPI_ISL_3543423 | NSP3 | hCoV-19/USA/ID-IBL-633120/2020 | A | 1775 | insstop | 1 | 20200721 |
| EPI_ISL_8619223 | NSP3 | hCoV-19/Germany/NI-IOV-60392970/2022 | A | 1775 | I | 9 | 20220107 |
| EPI_ISL_18268985 | NSP3 | hCoV-19/USA/MS-MSPHL-0513/2023 | A | 1775 | N | 7 | 20230807 |
| EPI_ISL_12223840 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0833/2022 | A | 1775 | F | 3 | 20220127 |
| EPI_ISL_4198509 | NSP3 | hCoV-19/Italy/SAR-3030/2021 | A | 1775 | K | 2 | 20210818 |
| EPI_ISL_19752436 | NSP3 | hCoV-19/Poland/WSSEGorzow-25S0021/2025 | A | 1775 | V | 2562 | 20250219 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | A | 1775 | Q | 2 | 20210804 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | A | 1775 | del | 31 | 20230217 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | A | 1775 | insLRstop | 1 | 20210805 |
| EPI_ISL_12688800 | NSP3 | hCoV-19/France/BRE-HMN-22042051343/2022 | A | 1775 | insKH | 1 | 20220328 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | A | 1775 | stop | 10 | 20220210 |
| EPI_ISL_18546818 | NSP3 | hCoV-19/USA/TX-HMH-M-135499/2023 | A | 1775 | D | 13 | 20231112 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | A | 1775 | G | 5 | 20230217 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | A | 1775 | L | 32 | 20230401 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | A | 1775 | W | 2 | 20230307 |
| EPI_ISL_19518140 | NSP3 | hCoV-19/Finland/THL-06667/2024 | A | 1775 | T | 464 | 20240823 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | A | 1775 | M | 3 | 20211227 |
| EPI_ISL_18927608 | NSP3 | hCoV-19/USA/TX-HMH-M-139156/2024 | A | 1775 | E | 11 | 20240208 |
| EPI_ISL_18475408 | NSP3 | hCoV-19/Japan/PG-578524/2023 | A | 1775 | S | 36 | 20230928 |
| EPI_ISL_5338104 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-54533/2021 | A | 1775 | P | 3 | 20210810 |
| EPI_ISL_4530117 | NSP3 | hCoV-19/England/PHEC-3G06EG3A/2021 | A | 1775 | R | 1 | 20210919 |
| EPI_ISL_16509824 | NSP3 | hCoV-19/Chile/AR-140257/2022 | Y | 1776 | S | 8 | 20221226 |
| EPI_ISL_12934306 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1526/2022 | Y | 1776 | L | 16 | 20220107 |
| EPI_ISL_19555120 | NSP3 | hCoV-19/Hong Kong/VB24347541/2024 | Y | 1776 | H | 52 | 20241109 |
| EPI_ISL_18741853 | NSP3 | hCoV-19/env/Ukraine/80287/2023 | Y | 1776 | T | 34 | 20230724 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | Y | 1776 | F | 19 | 20230401 |
| EPI_ISL_18464391 | NSP3 | hCoV-19/env/Ukraine/81017/2023 | Y | 1776 | C | 2 | 20230925 |
| EPI_ISL_18927608 | NSP3 | hCoV-19/USA/TX-HMH-M-139156/2024 | Y | 1776 | N | 13 | 20240208 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | Y | 1776 | del | 34 | 20230217 |
| EPI_ISL_8619223 | NSP3 | hCoV-19/Germany/NI-IOV-60392970/2022 | Y | 1776 | V | 9 | 20220107 |
| EPI_ISL_18146465 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-48009/2023 | Y | 1776 | D | 4 | 20230725 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | Y | 1776 | I | 3 | 20210719 |
| EPI_ISL_16073631 | NSP3 | hCoV-19/Oman/5225286/2022 | Y | 1776 | stop | 4 | 20220201 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | Y | 1776 | Q | 4 | 20211012 |
| EPI_ISL_3078868 | NSP3 | hCoV-19/England/OXON-FA1460/2021 | V | 1777 | Y | 1 | 20210709 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 1777 | del | 36 | 20230217 |
| EPI_ISL_14411300 | NSP3 | hCoV-19/Germany/NW-RKI-I-935342/2022 | V | 1777 | insNTFSSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYV | 1 | 20220725 |
| EPI_ISL_3178628 | NSP3 | hCoV-19/Scotland/OXON-FA4B1D/2021 | V | 1777 | T | 2 | 20210715 |
| EPI_ISL_1178774 | NSP3 | hCoV-19/England/OXON-F692A6/2021 | V | 1777 | H | 1 | 20210210 |
| EPI_ISL_8083713 | NSP3 | hCoV-19/USA/LA-OD-3526012/2021 | V | 1777 | Q | 2 | 20211213 |
| EPI_ISL_16509824 | NSP3 | hCoV-19/Chile/AR-140257/2022 | V | 1777 | C | 1 | 20221226 |
| EPI_ISL_12688800 | NSP3 | hCoV-19/France/BRE-HMN-22042051343/2022 | V | 1777 | insXX | 1 | 20220328 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | V | 1777 | N | 3 | 20211227 |
| EPI_ISL_15120651 | NSP3 | hCoV-19/Chile/MA-110467/2022 | V | 1777 | M | 3 | 20220907 |
| EPI_ISL_18522666 | NSP3 | hCoV-19/Sweden/O-14_SE300_DC23-006159/2023 | V | 1777 | S | 6 | 20231110 |
| EPI_ISL_18741853 | NSP3 | hCoV-19/env/Ukraine/80287/2023 | V | 1777 | L | 41 | 20230724 |
| EPI_ISL_19822365 | NSP3 | hCoV-19/New Zealand/25YA0821/2025 | V | 1777 | I | 1175 | 20250329 |
| EPI_ISL_12495369 | NSP3 | hCoV-19/France/GES-HMN-22042070613/2022 | V | 1777 | insMC | 1 | 20220328 |
| EPI_ISL_18669437 | NSP3 | hCoV-19/Brazil/SP-HIAE-ID2896/2023 | V | 1777 | F | 407 | 20231109 |
| EPI_ISL_12934306 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1526/2022 | V | 1777 | R | 3 | 20220107 |
| EPI_ISL_19634079 | NSP3 | hCoV-19/Canada/AB-ABPHL-128929/2024 | V | 1777 | A | 295 | 20241205 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | V | 1777 | stop | 9 | 20230401 |
| EPI_ISL_11950211 | NSP3 | hCoV-19/England/DHSC-CYYAFAP/2022 | V | 1777 | insLRLLS | 1 | 20220123 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | N | 1778 | V | 3 | 20211227 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | N | 1778 | R | 10 | 20230401 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | N | 1778 | del | 43 | 20230217 |
| EPI_ISL_19068520 | NSP3 | hCoV-19/USA/CA-CDPH-500136185/2024 | N | 1778 | H | 3 | 20240308 |
| EPI_ISL_17773313 | NSP3 | hCoV-19/Belgium/ULG-29910/2023 | N | 1778 | Y | 13 | 20230531 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | N | 1778 | C | 1 | 20211012 |
| EPI_ISL_19824295 | NSP3 | hCoV-19/South Korea/KDCA297288/2025 | N | 1778 | T | 40 | 20250317 |
| EPI_ISL_17499418 | NSP3 | hCoV-19/USA/FL-CDC-LC1036177/2023 | N | 1778 | B | 32 | 20230403 |
| EPI_ISL_16258476 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2026/2022 | N | 1778 | E | 2 | 20220802 |
| EPI_ISL_14676894 | NSP3 | hCoV-19/India/TN-INSACOG-CBR-CL1663/2021 | N | 1778 | insGLKRSLR | 1 | 20210611 |
| EPI_ISL_12934306 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1526/2022 | N | 1778 | stop | 4 | 20220107 |
| EPI_ISL_18741853 | NSP3 | hCoV-19/env/Ukraine/80287/2023 | N | 1778 | I | 55 | 20230724 |
| EPI_ISL_12223840 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0833/2022 | N | 1778 | G | 28 | 20220127 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | N | 1778 | A | 8 | 20211228 |
| EPI_ISL_19786229 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12625-P0/2025 | N | 1778 | D | 802 | 20250227 |
| EPI_ISL_19447366 | NSP3 | hCoV-19/USA/NY-SUNYQB-X4025305/2024 | N | 1778 | S | 3459 | 20240923 |
| EPI_ISL_3078868 | NSP3 | hCoV-19/England/OXON-FA1460/2021 | N | 1778 | Q | 1 | 20210709 |
| EPI_ISL_19622148 | NSP3 | hCoV-19/Brazil/PR-LACENPR-415820698/2024 | N | 1778 | K | 174 | 20241031 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | N | 1778 | F | 2 | 20210719 |
| EPI_ISL_18927608 | NSP3 | hCoV-19/USA/TX-HMH-M-139156/2024 | N | 1778 | L | 17 | 20240208 |
| EPI_ISL_19600306 | NSP3 | hCoV-19/USA/CA-CDPH-500143292/2024 | T | 1779 | A | 94 | 20240919 |
| EPI_ISL_16509824 | NSP3 | hCoV-19/Chile/AR-140257/2022 | T | 1779 | N | 13 | 20221226 |
| EPI_ISL_19801991 | NSP3 | hCoV-19/USA/IL-RIPHL_33466_G/2025 | T | 1779 | M | 486 | 20250226 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | T | 1779 | C | 3 | 20210921 |
| EPI_ISL_8083713 | NSP3 | hCoV-19/USA/LA-OD-3526012/2021 | T | 1779 | Q | 1 | 20211213 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | T | 1779 | L | 5 | 20220210 |
| EPI_ISL_1051648 | NSP3 | hCoV-19/England/OXON-F62155/2021 | T | 1779 | G | 2 | 20210130 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | T | 1779 | P | 1 | 20211012 |
| EPI_ISL_12934306 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-010722-1526/2022 | T | 1779 | Y | 3 | 20220107 |
| EPI_ISL_18371075 | NSP3 | hCoV-19/USA/LA-EVTL20071/2023 | T | 1779 | K | 23 | 20230829 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | T | 1779 | F | 3 | 20211115 |
| EPI_ISL_3078868 | NSP3 | hCoV-19/England/OXON-FA1460/2021 | T | 1779 | W | 1 | 20210709 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1779 | I | 1 | 20210318 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | T | 1779 | S | 12 | 20230307 |
| EPI_ISL_11940370 | NSP3 | hCoV-19/England/DHSC-CYDT4B1/2022 | T | 1779 | V | 6 | 20220126 |
| EPI_ISL_16258469 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2072/2022 | T | 1779 | H | 2 | 20220811 |
| EPI_ISL_18248130 | NSP3 | hCoV-19/Australia/TAS006008/2023 | T | 1779 | R | 43 | 20230829 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | T | 1779 | del | 45 | 20230217 |
| EPI_ISL_18224393 | NSP3 | hCoV-19/Canada/ON-PHL-23-28849/2023 | F | 1780 | L | 74 | 20230825 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | F | 1780 | S | 2 | 20210403 |
| EPI_ISL_4198511 | NSP3 | hCoV-19/Italy/SAR-3119/2021 | F | 1780 | insstopstopCG | 2 | 20210902 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | F | 1780 | C | 2 | 20230217 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | F | 1780 | N | 7 | 20230401 |
| EPI_ISL_17021250 | NSP3 | hCoV-19/Chile/AR-199379/2021 | F | 1780 | A | 5 | 20211228 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | F | 1780 | D | 2 | 20210115 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1780 | E | 1 | 20201214 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | F | 1780 | V | 8 | 20230104 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | F | 1780 | del | 50 | 20230217 |
| EPI_ISL_14435947 | NSP3 | hCoV-19/USA/TX-HMH-111213/2022 | F | 1780 | insQWK | 1 | 20220805 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1780 | P | 1 | 20220210 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | F | 1780 | Q | 1 | 20210719 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | F | 1780 | stop | 7 | 20230307 |
| EPI_ISL_18927608 | NSP3 | hCoV-19/USA/TX-HMH-M-139156/2024 | F | 1780 | Y | 27 | 20240208 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | F | 1780 | H | 1 | 20211115 |
| EPI_ISL_4198511 | NSP3 | hCoV-19/Italy/SAR-3119/2021 | F | 1780 | W | 3 | 20210902 |
| EPI_ISL_3078868 | NSP3 | hCoV-19/England/OXON-FA1460/2021 | F | 1780 | K | 1 | 20210709 |
| EPI_ISL_19594571 | NSP3 | hCoV-19/Yunnan/YNCDC-1768/2024 | F | 1780 | I | 10 | 20240710 |
| EPI_ISL_12881355 | NSP3 | hCoV-19/Canada/ON-PHL-22-22244/2022 | S | 1781 | P | 2 | 20220514 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | S | 1781 | Y | 1 | 20220812 |
| EPI_ISL_18771682 | NSP3 | hCoV-19/England/CLIMB-CM7YRSRK/2024 | S | 1781 | A | 465 | 20240105 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | S | 1781 | G | 7 | 20230401 |
| EPI_ISL_17021250 | NSP3 | hCoV-19/Chile/AR-199379/2021 | S | 1781 | E | 4 | 20211228 |
| EPI_ISL_8619223 | NSP3 | hCoV-19/Germany/NI-IOV-60392970/2022 | S | 1781 | C | 8 | 20220107 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | S | 1781 | Q | 4 | 20220210 |
| EPI_ISL_16509824 | NSP3 | hCoV-19/Chile/AR-140257/2022 | S | 1781 | M | 6 | 20221226 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | S | 1781 | stop | 27 | 20230307 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 1781 | del | 43 | 20230217 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | S | 1781 | H | 27 | 20230401 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | S | 1781 | T | 15 | 20230217 |
| EPI_ISL_15120651 | NSP3 | hCoV-19/Chile/MA-110467/2022 | S | 1781 | N | 10 | 20220907 |
| EPI_ISL_14311309 | NSP3 | hCoV-19/USA/TX-HMH-M-109619/2022 | S | 1781 | K | 3 | 20220727 |
| EPI_ISL_18058631 | NSP3 | hCoV-19/Anhui/HCDC-104/2023 | S | 1781 | L | 47 | 20230612 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | S | 1781 | V | 4 | 20210812 |
| EPI_ISL_1051648 | NSP3 | hCoV-19/England/OXON-F62155/2021 | S | 1781 | R | 2 | 20210130 |
| EPI_ISL_19323590 | NSP3 | hCoV-19/env/Germany/BY-LGL-6304471/2024 | S | 1781 | F | 24 | 20240724 |
| EPI_ISL_14205779 | NSP3 | hCoV-19/USA/VA-Curative-465308/2022 | S | 1781 | I | 6 | 20220719 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | S | 1781 | D | 4 | 20211227 |
| EPI_ISL_16258469 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2072/2022 | S | 1782 | C | 6 | 20220811 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | S | 1782 | V | 9 | 20230217 |
| EPI_ISL_19792730 | NSP3 | hCoV-19/Czech Republic/NRL_s823/2024 | S | 1782 | L | 446 | 20241028 |
| EPI_ISL_14288030 | NSP3 | hCoV-19/USA/ID-IBL-839597/2022 | S | 1782 | H | 1 | 20220725 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 1782 | del | 41 | 20230217 |
| EPI_ISL_8166906 | NSP3 | hCoV-19/USA/ID-IBL-776352/2021 | S | 1782 | insI | 1 | 20211213 |
| EPI_ISL_19323590 | NSP3 | hCoV-19/env/Germany/BY-LGL-6304471/2024 | S | 1782 | I | 23 | 20240724 |
| EPI_ISL_18395831 | NSP3 | hCoV-19/USA/TN-SPHL-8811/2023 | S | 1782 | P | 10 | 20230324 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | S | 1782 | N | 7 | 20230117 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 1782 | D | 1 | 20210318 |
| EPI_ISL_19418760 | NSP3 | hCoV-19/Spain/CT-HUB09204/2024 | S | 1782 | Q | 153 | 20240820 |
| EPI_ISL_19775885 | NSP3 | hCoV-19/USA/CO-CDPHE-43093699/2025 | S | 1782 | R | 9 | 20250217 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | S | 1782 | K | 16 | 20230401 |
| EPI_ISL_17275366 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45892/2023 | S | 1782 | E | 4 | 20230217 |
| EPI_ISL_19670284 | NSP3 | hCoV-19/USA/NY-MSHSPSP-PV300628/2024 | S | 1782 | A | 149 | 20240816 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1782 | F | 5 | 20220210 |
| EPI_ISL_5854760 | NSP3 | hCoV-19/Nigeria/MRL-OS-2079/2021 | S | 1782 | stop | 19 | 20210630 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | S | 1782 | M | 1 | 20211012 |
| EPI_ISL_13366951 | NSP3 | hCoV-19/USA/TX-HMH-100171/2022 | S | 1782 | T | 19 | 20220607 |
| EPI_ISL_951259 | NSP3 | hCoV-19/England/OXON-F4FACC/2021 | T | 1783 | insRSGISVstop | 1 | 20210108 |
| EPI_ISL_9110584 | NSP3 | hCoV-19/Germany/BB-RKI-I-456209/2022 | T | 1783 | S | 20 | 20220112 |
| EPI_ISL_18518218 | NSP3 | hCoV-19/USA/WA-HLX-VSX-A240583/2023 | T | 1783 | A | 36 | 20230914 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | T | 1783 | H | 4 | 20221226 |
| EPI_ISL_3052909 | NSP3 | hCoV-19/Italy/CAM-INTPas_C47/2021 | T | 1783 | insR | 1 | 20210414 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | T | 1783 | insGKG | 2 | 20220210 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | T | 1783 | L | 28 | 20230401 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | T | 1783 | F | 5 | 20211229 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | T | 1783 | M | 1 | 20211227 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | T | 1783 | R | 6 | 20230307 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | T | 1783 | stop | 1 | 20210419 |
| EPI_ISL_19641238 | NSP3 | hCoV-19/USA/CA-PFZ02427/2024 | T | 1783 | N | 49 | 20240925 |
| EPI_ISL_19724580 | NSP3 | hCoV-19/Italy/LOM_Unimi-279-25/2025 | T | 1783 | I | 318 | 20250107 |
| EPI_ISL_17021250 | NSP3 | hCoV-19/Chile/AR-199379/2021 | T | 1783 | E | 4 | 20211228 |
| EPI_ISL_14435947 | NSP3 | hCoV-19/USA/TX-HMH-111213/2022 | T | 1783 | K | 4 | 20220805 |
| EPI_ISL_7314066 | NSP3 | hCoV-19/USA/ID-IBL-770949/2021 | T | 1783 | P | 1 | 20211115 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | T | 1783 | del | 48 | 20230217 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | T | 1783 | D | 4 | 20220812 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | T | 1783 | C | 2 | 20230104 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1783 | Q | 1 | 20220210 |
| EPI_ISL_15120651 | NSP3 | hCoV-19/Chile/MA-110467/2022 | T | 1783 | V | 2 | 20220907 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | F | 1784 | del | 44 | 20230217 |
| EPI_ISL_19506566 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20636/2024 | F | 1784 | L | 70 | 20240712 |
| EPI_ISL_16360420 | NSP3 | hCoV-19/Brazil/RS-LGBM-HMV-01-0054-F/2022 | F | 1784 | S | 6 | 20221123 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | F | 1784 | Q | 9 | 20230401 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | F | 1784 | V | 3 | 20230104 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | F | 1784 | A | 1 | 20210319 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | F | 1784 | I | 13 | 20230307 |
| EPI_ISL_1051602 | NSP3 | hCoV-19/England/OXON-F5C789/2021 | F | 1784 | insCstopL | 1 | 20210123 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | F | 1784 | K | 3 | 20211227 |
| EPI_ISL_951259 | NSP3 | hCoV-19/England/OXON-F4FACC/2021 | F | 1784 | C | 1 | 20210108 |
| EPI_ISL_3759988 | NSP3 | hCoV-19/USA/ID-IBL-747478/2021 | F | 1784 | P | 2 | 20210809 |
| EPI_ISL_17021250 | NSP3 | hCoV-19/Chile/AR-199379/2021 | F | 1784 | insAK | 3 | 20211228 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | F | 1784 | stop | 6 | 20211229 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | F | 1784 | M | 1 | 20210419 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | F | 1784 | insstopR | 1 | 20211203 |
| EPI_ISL_14435947 | NSP3 | hCoV-19/USA/TX-HMH-111213/2022 | F | 1784 | H | 4 | 20220805 |
| EPI_ISL_15120651 | NSP3 | hCoV-19/Chile/MA-110467/2022 | F | 1784 | E | 6 | 20220907 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | F | 1784 | N | 3 | 20210518 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | F | 1784 | R | 4 | 20230117 |
| EPI_ISL_19595536 | NSP3 | hCoV-19/Yunnan/YNCDC-2236/2024 | F | 1784 | Y | 14 | 20240814 |
| EPI_ISL_1314062 | NSP3 | hCoV-19/USA/WY-WPHL-21016623/2021 | N | 1785 | I | 4 | 20210222 |
| EPI_ISL_16258469 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2072/2022 | N | 1785 | R | 4 | 20220811 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | N | 1785 | M | 1 | 20220812 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | N | 1785 | insGISVstopCWstopstop | 1 | 20201004 |
| EPI_ISL_19758452 | NSP3 | hCoV-19/USA/CA-MCPHL-GBE00030/2025 | N | 1785 | S | 2334 | 20250122 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1785 | G | 5 | 20220210 |
| EPI_ISL_19506566 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20636/2024 | N | 1785 | T | 43 | 20240712 |
| EPI_ISL_16534102 | NSP3 | hCoV-19/USA/WI-MCRI-012212/2022 | N | 1785 | K | 6 | 20221114 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1785 | stop | 17 | 20230101 |
| EPI_ISL_17483846 | NSP3 | hCoV-19/Israel/ICH-741197531/2023 | N | 1785 | Y | 9 | 20230403 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | N | 1785 | Q | 1 | 20210807 |
| EPI_ISL_19794944 | NSP3 | hCoV-19/USA/LA-EVTL23587/2025 | N | 1785 | D | 955 | 20250313 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | N | 1785 | V | 3 | 20211227 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | N | 1785 | del | 43 | 20230217 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | N | 1785 | insGIECLMLVI | 1 | 20210801 |
| EPI_ISL_17470287 | NSP3 | hCoV-19/England/PHEC-YYE1NGF/2023 | N | 1785 | B | 24 | 20230330 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | N | 1785 | H | 2 | 20230117 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | N | 1785 | L | 5 | 20220210 |
| EPI_ISL_2349002 | NSP3 | hCoV-19/Greece/142/2021 | N | 1785 | C | 1 | 20210209 |
| EPI_ISL_8083713 | NSP3 | hCoV-19/USA/LA-OD-3526012/2021 | V | 1786 | F | 2 | 20211213 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | V | 1786 | S | 2 | 20210419 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | V | 1786 | K | 2 | 20220812 |
| EPI_ISL_19697693 | NSP3 | hCoV-19/Australia/WA16672/2024 | V | 1786 | A | 2339 | 20241231 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | V | 1786 | C | 1 | 20201004 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1786 | Q | 1 | 20210318 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | V | 1786 | stop | 1 | 20230117 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | V | 1786 | del | 52 | 20230401 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | V | 1786 | E | 1 | 20210319 |
| EPI_ISL_1051648 | NSP3 | hCoV-19/England/OXON-F62155/2021 | V | 1786 | insYA | 1 | 20210130 |
| EPI_ISL_19819732 | NSP3 | hCoV-19/Singapore/Y25R14MSC33/2025 | V | 1786 | I | 1701 | 20250328 |
| EPI_ISL_12955335 | NSP3 | hCoV-19/Russia/MAG-CRIE-7730613999/2022 | V | 1786 | G | 2 | 20220212 |
| EPI_ISL_8329850 | NSP3 | hCoV-19/Pakistan/DUHS33/2021 | V | 1786 | insY | 8 | 20211227 |
| EPI_ISL_16258469 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2072/2022 | V | 1786 | T | 10 | 20220811 |
| EPI_ISL_19343610 | NSP3 | hCoV-19/Ireland/KY-CUH-SC0354/2024 | V | 1786 | L | 455 | 20240719 |
| EPI_ISL_19506566 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20636/2024 | V | 1786 | Y | 49 | 20240712 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | V | 1786 | insstop | 1 | 20201102 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1786 | R | 15 | 20230101 |
| EPI_ISL_17516925 | NSP3 | hCoV-19/Zhejiang/ZJCDC-839/2023 | P | 1787 | T | 46 | 20230407 |
| EPI_ISL_16258468 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2070/2022 | P | 1787 | D | 2 | 20220803 |
| EPI_ISL_14159446 | NSP3 | hCoV-19/Israel/SMC-7092007/2022 | P | 1787 | L | 21 | 20220717 |
| EPI_ISL_19506566 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20636/2024 | P | 1787 | Q | 143 | 20240712 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | P | 1787 | C | 1 | 20230117 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1787 | M | 1 | 20210318 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | P | 1787 | V | 2 | 20220812 |
| EPI_ISL_19648991 | NSP3 | hCoV-19/Australia/SA2219503/2024 | P | 1787 | S | 3997 | 20241221 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | P | 1787 | del | 51 | 20230401 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | P | 1787 | E | 1 | 20201102 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | P | 1787 | stop | 1 | 20210804 |
| EPI_ISL_7509703 | NSP3 | hCoV-19/USA/CA-CSMC593/2020 | P | 1787 | G | 1 | 20201004 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | P | 1787 | I | 4 | 20230217 |
| EPI_ISL_11225811 | NSP3 | hCoV-19/France/IDF-SLS-762112093514/2021 | P | 1787 | R | 3 | 20211228 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | P | 1787 | N | 4 | 20211229 |
| EPI_ISL_17070988 | NSP3 | hCoV-19/Germany/NW-RKI-I-1113296/2023 | P | 1787 | A | 17 | 20230223 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | P | 1787 | Y | 3 | 20230104 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | M | 1788 | G | 4 | 20211229 |
| EPI_ISL_16258499 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-1999/2022 | M | 1788 | A | 2 | 20220812 |
| EPI_ISL_19721737 | NSP3 | hCoV-19/USA/WI-WSLH-2500163/2025 | M | 1788 | T | 1332 | 20250101 |
| EPI_ISL_2190411 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-31775/2021 | M | 1788 | J | 1 | 20210309 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | M | 1788 | insI | 1 | 20210716 |
| EPI_ISL_18669456 | NSP3 | hCoV-19/Brazil/SP-HIAE-ID2915/2023 | M | 1788 | R | 27 | 20231117 |
| EPI_ISL_15388832 | NSP3 | hCoV-19/Morocco/FMP423/2021 | M | 1788 | E | 2 | 20211227 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | M | 1788 | S | 2 | 20221226 |
| EPI_ISL_19506566 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20636/2024 | M | 1788 | W | 64 | 20240712 |
| EPI_ISL_19825352 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-02D-MM00023R/2025 | M | 1788 | I | 43165 | 20250402 |
| EPI_ISL_11946497 | NSP3 | hCoV-19/England/DHSC-CYNHO7Q/2022 | M | 1788 | insLGRA | 1 | 20220112 |
| EPI_ISL_19465121 | NSP3 | hCoV-19/South Africa/NICD-N58589/2024 | M | 1788 | L | 120 | 20240523 |
| EPI_ISL_11355407 | NSP3 | hCoV-19/France/GES-ChNa-210059855201/2021 | M | 1788 | Q | 2 | 20210719 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | M | 1788 | C | 2 | 20230104 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | M | 1788 | stop | 3 | 20211227 |
| EPI_ISL_19082094 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140721/2024 | M | 1788 | K | 15 | 20240329 |
| EPI_ISL_7509709 | NSP3 | hCoV-19/USA/CA-CSMC599/2020 | M | 1788 | Y | 1 | 20201023 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | M | 1788 | F | 3 | 20211012 |
| EPI_ISL_18933331 | NSP3 | hCoV-19/env/Germany/BY-LGL-6146858/2024 | M | 1788 | del | 58 | 20240131 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | M | 1788 | N | 19 | 20230101 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | M | 1788 | insR | 1 | 20210806 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | M | 1788 | D | 1 | 20210403 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | M | 1788 | H | 1 | 20230217 |
| EPI_ISL_19821882 | NSP3 | hCoV-19/USA/NY-CDC-LC1136093/2025 | M | 1788 | V | 413 | 20250326 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | M | 1788 | insIstopstopQY | 1 | 20230117 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | E | 1789 | insLTCATTR | 1 | 20210518 |
| EPI_ISL_17761682 | NSP3 | hCoV-19/Denmark/DCGC-646998/2023 | E | 1789 | Z | 5 | 20230411 |
| EPI_ISL_17275312 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45837/2023 | E | 1789 | L | 2 | 20230217 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | E | 1789 | N | 2 | 20210806 |
| EPI_ISL_3079023 | NSP3 | hCoV-19/England/OXON-FA2872/2021 | E | 1789 | insMstop | 1 | 20210706 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | E | 1789 | W | 1 | 20210716 |
| EPI_ISL_8619223 | NSP3 | hCoV-19/Germany/NI-IOV-60392970/2022 | E | 1789 | T | 10 | 20220107 |
| EPI_ISL_19713008 | NSP3 | hCoV-19/USA/NY-Wadsworth-25004299-01/2024 | E | 1789 | D | 178 | 20241230 |
| EPI_ISL_18082208 | NSP3 | hCoV-19/USA/TX-KVI301612/2023 | E | 1789 | V | 15 | 20230712 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | E | 1789 | insGISVstopCWstopstopCEKL | 1 | 20210812 |
| EPI_ISL_17372600 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2619/2023 | E | 1789 | Y | 3 | 20230104 |
| EPI_ISL_19773967 | NSP3 | hCoV-19/Australia/WA16813/2025 | E | 1789 | G | 102 | 20250218 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | E | 1789 | insG | 1 | 20210806 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | E | 1789 | F | 1 | 20210403 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | E | 1789 | H | 5 | 20210921 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | E | 1789 | S | 4 | 20230116 |
| EPI_ISL_16258468 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2070/2022 | E | 1789 | P | 1 | 20220803 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | E | 1789 | I | 2 | 20230217 |
| EPI_ISL_19634546 | NSP3 | hCoV-19/Japan/FR021-1093/2024 | E | 1789 | K | 4967 | 20241202 |
| EPI_ISL_19150827 | NSP3 | hCoV-19/Sichuan/YBCDC-XGCX206/2024 | E | 1789 | Q | 9 | 20240424 |
| EPI_ISL_19300946 | NSP3 | hCoV-19/Spain/VC-CVA_LAFE-124601/2024 | E | 1789 | A | 362 | 20240630 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | E | 1789 | del | 44 | 20230401 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | E | 1789 | R | 6 | 20230401 |
| EPI_ISL_17372562 | NSP3 | hCoV-19/India/TN-SPHL-2852/2023 | E | 1789 | stop | 16 | 20230305 |
| EPI_ISL_19380192 | NSP3 | hCoV-19/USA/MS-MSPHL-0284/2024 | K | 1790 | N | 124 | 20240729 |
| EPI_ISL_8405532 | NSP3 | hCoV-19/Australia/SA1146/2021 | K | 1790 | Y | 2 | 20211212 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | K | 1790 | stop | 4 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1790 | M | 2 | 20220210 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | K | 1790 | D | 1 | 20211006 |
| EPI_ISL_17021250 | NSP3 | hCoV-19/Chile/AR-199379/2021 | K | 1790 | insV | 3 | 20211228 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | K | 1790 | insK | 1 | 20211006 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 1790 | G | 1 | 20230116 |
| EPI_ISL_12223840 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0833/2022 | K | 1790 | A | 2 | 20220127 |
| EPI_ISL_17699525 | NSP3 | hCoV-19/Romania/NIPH-218310/2023 | K | 1790 | Q | 26 | 20230414 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | K | 1790 | C | 2 | 20210115 |
| EPI_ISL_3923068 | NSP3 | hCoV-19/USA/ID-IBL-749048/2021 | K | 1790 | insN | 1 | 20210813 |
| EPI_ISL_18980740 | NSP3 | hCoV-19/USA/TX-HMH-M-140021/2024 | K | 1790 | T | 24 | 20240225 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | K | 1790 | del | 42 | 20230401 |
| EPI_ISL_16148729 | NSP3 | hCoV-19/Germany/NW-RKI-I-1055163/2022 | K | 1790 | I | 66 | 20221019 |
| EPI_ISL_16258468 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2070/2022 | K | 1790 | S | 2 | 20220803 |
| EPI_ISL_7509709 | NSP3 | hCoV-19/USA/CA-CSMC599/2020 | K | 1790 | W | 1 | 20201023 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | K | 1790 | L | 5 | 20230117 |
| EPI_ISL_18580887 | NSP3 | hCoV-19/Canada/BC-BCCDC-675364/2023 | K | 1790 | E | 25 | 20231116 |
| EPI_ISL_19648828 | NSP3 | hCoV-19/USA/UT-UPHL-250103884801/2024 | K | 1790 | R | 830 | 20241214 |
| EPI_ISL_11947284 | NSP3 | hCoV-19/England/DHSC-CYNQ3FU/2021 | L | 1791 | insCACCXX | 1 | 20211219 |
| EPI_ISL_18980740 | NSP3 | hCoV-19/USA/TX-HMH-M-140021/2024 | L | 1791 | Q | 14 | 20240225 |
| EPI_ISL_19506566 | NSP3 | hCoV-19/Malaysia/UNIMAS-B20636/2024 | L | 1791 | S | 85 | 20240712 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | L | 1791 | insP | 1 | 20210726 |
| EPI_ISL_19824655 | NSP3 | hCoV-19/USA/MI-MDHHS-SC45770/2025 | L | 1791 | F | 10671 | 20250318 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | L | 1791 | del | 38 | 20230401 |
| EPI_ISL_1908152 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-AH007/2021 | L | 1791 | C | 1 | 20210420 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | L | 1791 | A | 1 | 20210319 |
| EPI_ISL_19762284 | NSP3 | hCoV-19/USA/HI-TAMC_4013/2025 | L | 1791 | I | 306 | 20250205 |
| EPI_ISL_19574828 | NSP3 | hCoV-19/Japan/NCGM-07060/2022 | L | 1791 | P | 9 | 20220824 |
| EPI_ISL_19641117 | NSP3 | hCoV-19/USA/CA-PFZ02274/2024 | L | 1791 | H | 86 | 20240920 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | L | 1791 | K | 4 | 20220804 |
| EPI_ISL_14763182 | NSP3 | hCoV-19/Canada/BC-BCCDC-473977/2022 | L | 1791 | J | 11 | 20220709 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | L | 1791 | stop | 1 | 20210802 |
| EPI_ISL_15387748 | NSP3 | hCoV-19/Slovenia/223926/2022 | L | 1791 | R | 6 | 20220913 |
| EPI_ISL_18743675 | NSP3 | hCoV-19/USA/TX-HMH-M-136743/2023 | L | 1791 | T | 60 | 20231226 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | L | 1791 | insTLI | 1 | 20221226 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | L | 1791 | insG | 1 | 20211012 |
| EPI_ISL_19334604 | NSP3 | hCoV-19/Egypt/CPHL-EGY24169/2024 | L | 1791 | N | 2 | 20240626 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | L | 1791 | G | 1 | 20210804 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | L | 1791 | W | 2 | 20210807 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1791 | D | 1 | 20220210 |
| EPI_ISL_17821713 | NSP3 | hCoV-19/env/Ukraine/77834/2023 | L | 1791 | V | 32 | 20230406 |
| EPI_ISL_18444708 | NSP3 | hCoV-19/Spain/MD-HULP-062511852/2023 | K | 1792 | del | 43 | 20231012 |
| EPI_ISL_18743675 | NSP3 | hCoV-19/USA/TX-HMH-M-136743/2023 | K | 1792 | Q | 68 | 20231226 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | K | 1792 | V | 5 | 20220804 |
| EPI_ISL_7508871 | NSP3 | hCoV-19/USA/CA-CSMC271/2021 | K | 1792 | L | 2 | 20210220 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 1792 | S | 4 | 20230116 |
| EPI_ISL_18980740 | NSP3 | hCoV-19/USA/TX-HMH-M-140021/2024 | K | 1792 | N | 62 | 20240225 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | K | 1792 | H | 1 | 20230117 |
| EPI_ISL_11925990 | NSP3 | hCoV-19/England/DHSC-CYB7P3A/2021 | K | 1792 | insFTstopEVstop | 1 | 20211228 |
| EPI_ISL_15427408 | NSP3 | hCoV-19/USA/NY-NYULH8652/2022 | K | 1792 | T | 5 | 20220915 |
| EPI_ISL_16595060 | NSP3 | hCoV-19/Germany/RP-RKI-I-1087298/2023 | K | 1792 | I | 7 | 20230109 |
| EPI_ISL_11946117 | NSP3 | hCoV-19/England/DHSC-CYNFSK6/2022 | K | 1792 | insFTstopEVX | 3 | 20220216 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | K | 1792 | A | 4 | 20211227 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | K | 1792 | Y | 1 | 20230217 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | K | 1792 | insN | 2 | 20230401 |
| EPI_ISL_11938383 | NSP3 | hCoV-19/England/DHSC-CYDJYN5/2021 | K | 1792 | insTLIVLRCCVH | 1 | 20211219 |
| EPI_ISL_19595603 | NSP3 | hCoV-19/Yunnan/YNCDC-1904/2024 | K | 1792 | R | 104 | 20240730 |
| EPI_ISL_10314910 | NSP3 | hCoV-19/Belarus/BR-CRIE-7724094675/2021 | K | 1792 | stop | 1 | 20211130 |
| EPI_ISL_14616071 | NSP3 | hCoV-19/Australia/QLD0x010BC9/2022 | K | 1792 | E | 18 | 20220812 |
| EPI_ISL_19535734 | NSP3 | hCoV-19/Greece/PHLnetwork_5168/2024 | T | 1793 | A | 595 | 20240829 |
| EPI_ISL_19831419 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56920/2025 | T | 1793 | I | 1822 | 20250324 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | T | 1793 | L | 3 | 20210319 |
| EPI_ISL_18356805 | NSP3 | hCoV-19/Spain/RI-CIBIR-306615800/2023 | T | 1793 | K | 68 | 20230802 |
| EPI_ISL_5438451 | NSP3 | hCoV-19/USA/NV-NSPHL-412841/2021 | T | 1793 | R | 1 | 20210904 |
| EPI_ISL_17714185 | NSP3 | hCoV-19/Canada/NS-NSH-628743/2023 | T | 1793 | S | 5 | 20230511 |
| EPI_ISL_11941060 | NSP3 | hCoV-19/England/DHSC-CYDU87E/2022 | T | 1793 | insPVA | 1 | 20220115 |
| EPI_ISL_19799906 | NSP3 | hCoV-19/USA/TX-HMH-M-147107/2024 | T | 1793 | N | 86 | 20241224 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | T | 1793 | C | 2 | 20210812 |
| EPI_ISL_16258469 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2072/2022 | T | 1793 | M | 5 | 20220811 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 1793 | V | 4 | 20230116 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | T | 1793 | H | 25 | 20230401 |
| EPI_ISL_18444708 | NSP3 | hCoV-19/Spain/MD-HULP-062511852/2023 | T | 1793 | del | 42 | 20231012 |
| EPI_ISL_19621060 | NSP3 | hCoV-19/Japan/PG-574251/2023 | T | 1793 | P | 40 | 20230829 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | T | 1793 | E | 1 | 20210804 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | T | 1793 | G | 1 | 20211012 |
| EPI_ISL_5049871 | NSP3 | hCoV-19/Spain/CT-LabRefCat-533337/2021 | T | 1793 | D | 1 | 20210716 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | L | 1794 | stop | 27 | 20230401 |
| EPI_ISL_7508871 | NSP3 | hCoV-19/USA/CA-CSMC271/2021 | L | 1794 | Y | 1 | 20210220 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | L | 1794 | K | 1 | 20230217 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | L | 1794 | F | 6 | 20230217 |
| EPI_ISL_19799906 | NSP3 | hCoV-19/USA/TX-HMH-M-147107/2024 | L | 1794 | T | 86 | 20241224 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 1794 | insSDVF | 1 | 20211006 |
| EPI_ISL_12145163 | NSP3 | hCoV-19/Turkey/HSGM-G8402/2022 | L | 1794 | P | 2 | 20220312 |
| EPI_ISL_19458570 | NSP3 | hCoV-19/Slovenia/IMI-V0-5988/2024 | L | 1794 | I | 270 | 20240926 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | L | 1794 | H | 2 | 20230217 |
| EPI_ISL_13461430 | NSP3 | hCoV-19/Israel/ICH-741232239/2022 | L | 1794 | V | 10 | 20220618 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | L | 1794 | M | 1 | 20210804 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1794 | N | 1 | 20210318 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | L | 1794 | del | 38 | 20230217 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | L | 1794 | E | 1 | 20220804 |
| EPI_ISL_12145175 | NSP3 | hCoV-19/Turkey/HSGM-3GS1331/2022 | L | 1794 | Q | 22 | 20220312 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 1794 | D | 2 | 20211006 |
| EPI_ISL_10764101 | NSP3 | hCoV-19/Slovakia/BA_22_00011278/2022 | L | 1794 | R | 3 | 20220218 |
| EPI_ISL_19349847 | NSP3 | hCoV-19/USA/NY-CDC-LC1114031/2024 | L | 1794 | J | 7 | 20240805 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | L | 1794 | S | 6 | 20230401 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | V | 1795 | C | 6 | 20230401 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | V | 1795 | M | 3 | 20210812 |
| EPI_ISL_1909246 | NSP3 | hCoV-19/Morocco/FMP-281/2021 | V | 1795 | E | 1 | 20210403 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | V | 1795 | L | 173 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1795 | T | 3 | 20220210 |
| EPI_ISL_19829556 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022731_01/2025 | V | 1795 | I | 743 | 20250214 |
| EPI_ISL_17094158 | NSP3 | hCoV-19/Austria/AGES-1119119/2023 | V | 1795 | G | 25 | 20230221 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | V | 1795 | del | 36 | 20230217 |
| EPI_ISL_7508871 | NSP3 | hCoV-19/USA/CA-CSMC271/2021 | V | 1795 | Q | 1 | 20210220 |
| EPI_ISL_19770996 | NSP3 | hCoV-19/USA/MN-MDH-46400/2025 | V | 1795 | A | 43 | 20250225 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1795 | D | 1 | 20201214 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | V | 1795 | K | 2 | 20210319 |
| EPI_ISL_19799906 | NSP3 | hCoV-19/USA/TX-HMH-M-147107/2024 | V | 1795 | S | 86 | 20241224 |
| EPI_ISL_10858419 | NSP3 | hCoV-19/Turkey/HSGM-G2218/2022 | V | 1795 | N | 5 | 20220217 |
| EPI_ISL_14841462 | NSP3 | hCoV-19/Poland/7267053331/2022 | V | 1795 | insD | 1 | 20220906 |
| EPI_ISL_19632118 | NSP3 | hCoV-19/Canada/ON-PHL-202425026/2024 | V | 1795 | F | 4065 | 20241212 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | A | 1796 | I | 7 | 20211227 |
| EPI_ISL_19793578 | NSP3 | hCoV-19/USA/MN-MDH-46490/2025 | A | 1796 | V | 6770 | 20250305 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | A | 1796 | H | 4 | 20230117 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | A | 1796 | Q | 22 | 20230401 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | A | 1796 | L | 8 | 20230307 |
| EPI_ISL_19827081 | NSP3 | hCoV-19/Chile/MA-ISPC-24930/2025 | A | 1796 | T | 443 | 20250322 |
| EPI_ISL_13784410 | NSP3 | hCoV-19/USA/CA-CDPH-FS47149152/2022 | A | 1796 | P | 4 | 20220622 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | A | 1796 | K | 1 | 20210806 |
| EPI_ISL_7508765 | NSP3 | hCoV-19/USA/CA-CSMC251/2021 | A | 1796 | R | 1 | 20210213 |
| EPI_ISL_18428364 | NSP3 | hCoV-19/France/PDL-IPP23880/2023 | A | 1796 | E | 7 | 20231009 |
| EPI_ISL_19762714 | NSP3 | hCoV-19/Chile/RM-ISPC-14086/2025 | A | 1796 | S | 102 | 20250214 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | A | 1796 | W | 1 | 20230116 |
| EPI_ISL_19799906 | NSP3 | hCoV-19/USA/TX-HMH-M-147107/2024 | A | 1796 | C | 87 | 20241224 |
| EPI_ISL_14311309 | NSP3 | hCoV-19/USA/TX-HMH-M-109619/2022 | A | 1796 | stop | 2 | 20220727 |
| EPI_ISL_12095849 | NSP3 | hCoV-19/England/QEUH-3D49DB3/2022 | A | 1796 | G | 11 | 20220411 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | A | 1796 | F | 2 | 20220804 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | A | 1796 | N | 3 | 20230401 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | A | 1796 | del | 36 | 20230217 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | T | 1797 | insLIRFSSNFstopRTSNGKTQNTstopLQL | 1 | 20210812 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | T | 1797 | del | 34 | 20230217 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | T | 1797 | insLIRFHQLLTYQWKTQNTSCN | 1 | 20210801 |
| EPI_ISL_7508765 | NSP3 | hCoV-19/USA/CA-CSMC251/2021 | T | 1797 | F | 2 | 20210213 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | T | 1797 | C | 5 | 20230401 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | T | 1797 | L | 27 | 20230401 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | T | 1797 | Q | 6 | 20230117 |
| EPI_ISL_19833207 | NSP3 | hCoV-19/Poland/Kce-55/2025 | T | 1797 | I | 4455 | 20250411 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 1797 | R | 1 | 20211006 |
| EPI_ISL_19620006 | NSP3 | hCoV-19/USA/TX-PHH-24C-290M0680/2024 | T | 1797 | A | 190 | 20241016 |
| EPI_ISL_19799906 | NSP3 | hCoV-19/USA/TX-HMH-M-147107/2024 | T | 1797 | N | 261 | 20241224 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 1797 | stop | 1 | 20230116 |
| EPI_ISL_11415640 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC06LAMS/2022 | T | 1797 | K | 1 | 20220131 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | T | 1797 | Y | 1 | 20210804 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | T | 1797 | insH | 1 | 20210806 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1797 | G | 1 | 20210318 |
| EPI_ISL_1009012 | NSP3 | hCoV-19/Lebanon/LAU-R59/2020 | T | 1797 | P | 1 | 20200601 |
| EPI_ISL_11946758 | NSP3 | hCoV-19/England/DHSC-CYNJDN3/2022 | T | 1797 | insVMFL | 1 | 20220119 |
| EPI_ISL_1249192 | NSP3 | hCoV-19/England/OXON-F70206/2021 | T | 1797 | V | 1 | 20210221 |
| EPI_ISL_16455625 | NSP3 | hCoV-19/USA/WA-CDC-UW22122695873/2022 | T | 1797 | S | 14 | 20221226 |
| EPI_ISL_17021248 | NSP3 | hCoV-19/Chile/RM-199375/2021 | T | 1797 | E | 3 | 20211228 |
| EPI_ISL_11953606 | NSP3 | hCoV-19/England/DHSC-CYYKUHW/2022 | T | 1797 | insEF | 1 | 20220104 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | A | 1798 | Y | 1 | 20210921 |
| EPI_ISL_19361523 | NSP3 | hCoV-19/env/Ukraine/84288/2023 | A | 1798 | insR | 1 | 20231207 |
| EPI_ISL_17427516 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2885/2023 | A | 1798 | R | 5 | 20230401 |
| EPI_ISL_3588743 | NSP3 | hCoV-19/USA/ID-IBL-746173/2021 | A | 1798 | K | 3 | 20210804 |
| EPI_ISL_11946907 | NSP3 | hCoV-19/England/DHSC-CYNKBX9/2022 | A | 1798 | insGWstopXXXX | 1 | 20220210 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | A | 1798 | Q | 24 | 20230401 |
| EPI_ISL_16102712 | NSP3 | hCoV-19/env/USA/CA-SEARCH-209036/2022 | A | 1798 | P | 3 | 20220928 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | A | 1798 | I | 3 | 20211227 |
| EPI_ISL_7508765 | NSP3 | hCoV-19/USA/CA-CSMC251/2021 | A | 1798 | H | 1 | 20210213 |
| EPI_ISL_19050132 | NSP3 | hCoV-19/Japan/PG-600404/2024 | A | 1798 | T | 326 | 20240226 |
| EPI_ISL_11947205 | NSP3 | hCoV-19/England/DHSC-CYNOG3A/2021 | A | 1798 | insXXXX | 1 | 20211226 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | A | 1798 | F | 1 | 20230217 |
| EPI_ISL_14036366 | NSP3 | hCoV-19/Chile/RM-85124/2022 | A | 1798 | G | 10 | 20220708 |
| EPI_ISL_19315768 | NSP3 | hCoV-19/Malaysia/MKAI-6773157/2024 | A | 1798 | S | 129 | 20240709 |
| EPI_ISL_18508138 | NSP3 | hCoV-19/Japan/PG-581908/2023 | A | 1798 | V | 4657 | 20231016 |
| EPI_ISL_19032949 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6354/2024 | A | 1798 | E | 3 | 20240120 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | A | 1798 | del | 35 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1798 | N | 1 | 20220210 |
| EPI_ISL_19799906 | NSP3 | hCoV-19/USA/TX-HMH-M-147107/2024 | A | 1798 | C | 91 | 20241224 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | A | 1798 | stop | 1 | 20230116 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | A | 1798 | M | 1 | 20201102 |
| EPI_ISL_14311309 | NSP3 | hCoV-19/USA/TX-HMH-M-109619/2022 | A | 1798 | L | 4 | 20220727 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | E | 1799 | T | 1 | 20230307 |
| EPI_ISL_11949158 | NSP3 | hCoV-19/England/DHSC-CYY3JSM/2022 | E | 1799 | F | 1 | 20220222 |
| EPI_ISL_19658469 | NSP3 | hCoV-19/USA/CO-CDPHE-42687537/2024 | E | 1799 | G | 345 | 20241219 |
| EPI_ISL_18321994 | NSP3 | hCoV-19/USA/TX-HMH-M-133890/2023 | E | 1799 | Q | 72 | 20230913 |
| EPI_ISL_7508765 | NSP3 | hCoV-19/USA/CA-CSMC251/2021 | E | 1799 | P | 1 | 20210213 |
| EPI_ISL_18780641 | NSP3 | hCoV-19/USA/NJ-CDC-LC1080762/2023 | E | 1799 | V | 13 | 20231229 |
| EPI_ISL_19385898 | NSP3 | hCoV-19/Germany/BY-MVP-000024831/2024 | E | 1799 | Z | 13 | 20240723 |
| EPI_ISL_19523268 | NSP3 | hCoV-19/France/ARA-HCL124036125301/2024 | E | 1799 | D | 180 | 20241018 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1799 | I | 3 | 20220210 |
| EPI_ISL_16284113 | NSP3 | hCoV-19/France/OCC-ChuMtp-99223272505/2022 | E | 1799 | insAELATILLLXXXXXXXXXDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAE | 1 | 20221123 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | E | 1799 | insKLNL | 1 | 20210803 |
| EPI_ISL_1732283 | NSP3 | hCoV-19/Italy/ABR-FL161/2021 | E | 1799 | S | 1 | 20210419 |
| EPI_ISL_19019272 | NSP3 | hCoV-19/USA/NY-NYULH-18903/2024 | E | 1799 | A | 118 | 20240321 |
| EPI_ISL_19766493 | NSP3 | hCoV-19/USA/IA-SHL-2588147/2025 | E | 1799 | K | 564 | 20250226 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | E | 1799 | C | 5 | 20230116 |
| EPI_ISL_19799906 | NSP3 | hCoV-19/USA/TX-HMH-M-147107/2024 | E | 1799 | R | 85 | 20241224 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | E | 1799 | L | 2 | 20220804 |
| EPI_ISL_12955361 | NSP3 | hCoV-19/Russia/CU-CRIE-7730687633/2022 | E | 1799 | stop | 10 | 20220214 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | E | 1799 | N | 4 | 20230217 |
| EPI_ISL_11931920 | NSP3 | hCoV-19/England/DHSC-CYBRG5Q/2022 | E | 1799 | insNXXXXX | 1 | 20220107 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | E | 1799 | del | 36 | 20230217 |
| EPI_ISL_3756621 | NSP3 | hCoV-19/USA/ID-IBL-744725/2021 | A | 1800 | insstop | 1 | 20210802 |
| EPI_ISL_19714511 | NSP3 | hCoV-19/Russia/MOS-RII-MH219614S/2024 | A | 1800 | D | 49 | 20241125 |
| EPI_ISL_19780520 | NSP3 | hCoV-19/USA/NY-NYULH-22348/2025 | A | 1800 | S | 641 | 20250303 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | A | 1800 | Q | 1 | 20210803 |
| EPI_ISL_17427959 | NSP3 | hCoV-19/India/GJ-GBRC11068/2023 | A | 1800 | N | 30 | 20230320 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | A | 1800 | W | 1 | 20210921 |
| EPI_ISL_19562857 | NSP3 | hCoV-19/Netherlands/OV-RIVM-143341/2024 | A | 1800 | T | 588 | 20241012 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | A | 1800 | I | 4 | 20230117 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | A | 1800 | stop | 1 | 20201102 |
| EPI_ISL_17427519 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2865/2023 | A | 1800 | L | 34 | 20230401 |
| EPI_ISL_18092950 | NSP3 | hCoV-19/USA/CO-CDPHE-40730875/2023 | A | 1800 | G | 8 | 20230409 |
| EPI_ISL_19361523 | NSP3 | hCoV-19/env/Ukraine/84288/2023 | A | 1800 | R | 2 | 20231207 |
| EPI_ISL_11936524 | NSP3 | hCoV-19/England/DHSC-CYDEDAP/2021 | A | 1800 | insFGRRG | 1 | 20211225 |
| EPI_ISL_19812385 | NSP3 | hCoV-19/Germany/NI-RKI-I-1147947/2025 | A | 1800 | V | 3070 | 20250312 |
| EPI_ISL_16258476 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2026/2022 | A | 1800 | K | 1 | 20220802 |
| EPI_ISL_11930946 | NSP3 | hCoV-19/England/DHSC-CYBME1O/2022 | A | 1800 | insLNXXX | 1 | 20220104 |
| EPI_ISL_15262370 | NSP3 | hCoV-19/USA/UT-UPHL-220702003565/2022 | A | 1800 | C | 4 | 20220607 |
| EPI_ISL_10830325 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83990/2022 | A | 1800 | P | 4 | 20220120 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | A | 1800 | del | 38 | 20230217 |
| EPI_ISL_11308733 | NSP3 | hCoV-19/England/BRBR-3AE2A5E/2022 | E | 1801 | Z | 11 | 20220315 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | E | 1801 | S | 3 | 20230217 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | E | 1801 | R | 1 | 20210803 |
| EPI_ISL_17386593 | NSP3 | hCoV-19/Canada/QC-L00598352001/2023 | E | 1801 | V | 8 | 20230320 |
| EPI_ISL_14026627 | NSP3 | hCoV-19/Belgium/AZDelta-2228-12151/2022 | E | 1801 | Q | 158 | 20220718 |
| EPI_ISL_3421844 | NSP3 | hCoV-19/England/OXON-FA8B19/2020 | E | 1801 | M | 1 | 20201222 |
| EPI_ISL_15389070 | NSP3 | hCoV-19/Morocco/FMP437/2021 | E | 1801 | P | 3 | 20211227 |
| EPI_ISL_19481295 | NSP3 | hCoV-19/Hubei/HCDC-YC7402/2024 | E | 1801 | D | 40 | 20240924 |
| EPI_ISL_3756621 | NSP3 | hCoV-19/USA/ID-IBL-744725/2021 | E | 1801 | T | 1 | 20210802 |
| EPI_ISL_19374153 | NSP3 | hCoV-19/Japan/SUPCRC-6671/2024 | E | 1801 | G | 740 | 20240813 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | E | 1801 | L | 2 | 20210518 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | E | 1801 | F | 1 | 20201102 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 1801 | I | 1 | 20211006 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | E | 1801 | del | 35 | 20230217 |
| EPI_ISL_18235894 | NSP3 | hCoV-19/Japan/PG-563257/2023 | E | 1801 | N | 38 | 20230815 |
| EPI_ISL_19829042 | NSP3 | hCoV-19/USA/NY-CDC-LC1136626/2025 | E | 1801 | K | 162 | 20250329 |
| EPI_ISL_19799906 | NSP3 | hCoV-19/USA/TX-HMH-M-147107/2024 | E | 1801 | stop | 117 | 20241224 |
| EPI_ISL_19541620 | NSP3 | hCoV-19/Russia/SPE-RII-MH207203S/2024 | E | 1801 | A | 388 | 20241026 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | L | 1802 | M | 2 | 20211012 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | L | 1802 | C | 4 | 20230116 |
| EPI_ISL_17427529 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2855/2023 | L | 1802 | T | 92 | 20230401 |
| EPI_ISL_19709370 | NSP3 | hCoV-19/USA/CA-PFZ03626/2024 | L | 1802 | F | 4615 | 20241101 |
| EPI_ISL_16407944 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1112/2022 | L | 1802 | stop | 1 | 20221119 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | L | 1802 | D | 1 | 20220804 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | L | 1802 | H | 1 | 20210806 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | L | 1802 | S | 1 | 20210805 |
| EPI_ISL_19194176 | NSP3 | hCoV-19/Sweden/AB-01_SE100_24CS500598/2024 | L | 1802 | V | 132 | 20240528 |
| EPI_ISL_19695237 | NSP3 | hCoV-19/Japan/FR035-0509/2024 | L | 1802 | I | 305 | 20241224 |
| EPI_ISL_18892687 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00019095_01/2023 | L | 1802 | P | 40 | 20230828 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | L | 1802 | del | 33 | 20230217 |
| EPI_ISL_18056772 | NSP3 | hCoV-19/England/CLIMB-CM7YKRQD/2023 | L | 1802 | J | 7 | 20230718 |
| EPI_ISL_11932141 | NSP3 | hCoV-19/England/DHSC-CYBSFJX/2022 | L | 1802 | insQDVVNHNAQ | 1 | 20220102 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1802 | G | 1 | 20210318 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | L | 1802 | N | 1 | 20210921 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | A | 1803 | L | 2 | 20220804 |
| EPI_ISL_18416875 | NSP3 | hCoV-19/Russia/SPE-RII-MH144796S/2023 | A | 1803 | G | 4 | 20230927 |
| EPI_ISL_8803736 | NSP3 | hCoV-19/India/MH-NCCS-2748700569019/2021 | A | 1803 | K | 2 | 20210811 |
| EPI_ISL_19622869 | NSP3 | hCoV-19/New Zealand/24YA7540/2024 | A | 1803 | S | 271 | 20241119 |
| EPI_ISL_15743768 | NSP3 | hCoV-19/Sweden/03_SE600_500000208275SP/2022 | A | 1803 | insXX | 1 | 20221031 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | A | 1803 | I | 1 | 20230217 |
| EPI_ISL_840352 | NSP3 | hCoV-19/England/OXON-F4670A/2020 | A | 1803 | M | 2 | 20201216 |
| EPI_ISL_17275304 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45829/2023 | A | 1803 | F | 3 | 20230217 |
| EPI_ISL_14288030 | NSP3 | hCoV-19/USA/ID-IBL-839597/2022 | A | 1803 | R | 5 | 20220725 |
| EPI_ISL_19622306 | NSP3 | hCoV-19/USA/MA-MASPHL-13179/2024 | A | 1803 | T | 338 | 20241204 |
| EPI_ISL_17427529 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2855/2023 | A | 1803 | C | 92 | 20230401 |
| EPI_ISL_11943639 | NSP3 | hCoV-19/England/DHSC-CYN1PO9/2022 | A | 1803 | D | 3 | 20220210 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | A | 1803 | stop | 1 | 20211012 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 1803 | H | 1 | 20210318 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | A | 1803 | N | 2 | 20210807 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | A | 1803 | del | 37 | 20230217 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | A | 1803 | Q | 43 | 20230401 |
| EPI_ISL_19825303 | NSP3 | hCoV-19/USA/NY-NYULH-22586/2025 | A | 1803 | V | 1785 | 20250403 |
| EPI_ISL_19739463 | NSP3 | hCoV-19/USA/IL-CDC-LC1131831/2025 | A | 1803 | E | 61 | 20250204 |
| EPI_ISL_3421844 | NSP3 | hCoV-19/England/OXON-FA8B19/2020 | A | 1803 | P | 1 | 20201222 |
| EPI_ISL_16258476 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2026/2022 | K | 1804 | E | 12 | 20220802 |
| EPI_ISL_11949158 | NSP3 | hCoV-19/England/DHSC-CYY3JSM/2022 | K | 1804 | insXXXXXXXXXX | 1 | 20220222 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1804 | F | 1 | 20201214 |
| EPI_ISL_19613247 | NSP3 | hCoV-19/Thailand/MTM_01_1783/2024 | K | 1804 | T | 19 | 20240618 |
| EPI_ISL_19753192 | NSP3 | hCoV-19/USA/CA-PFZ04344/2025 | K | 1804 | N | 5163 | 20250202 |
| EPI_ISL_19661165 | NSP3 | hCoV-19/Japan/FR088-0273/2024 | K | 1804 | R | 300 | 20241214 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | K | 1804 | H | 1 | 20230217 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | K | 1804 | del | 33 | 20230217 |
| EPI_ISL_18282555 | NSP3 | hCoV-19/USA/MD-CDC-LC1057725/2023 | K | 1804 | Q | 8 | 20230907 |
| EPI_ISL_17463064 | NSP3 | hCoV-19/USA/NY-MVL314221302/2022 | K | 1804 | M | 4 | 20221110 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | K | 1804 | G | 3 | 20230117 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | K | 1804 | P | 2 | 20230307 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 1804 | stop | 4 | 20230116 |
| EPI_ISL_2434780 | NSP3 | hCoV-19/Scotland/OXON-F8241A/2021 | K | 1804 | I | 1 | 20210518 |
| EPI_ISL_840352 | NSP3 | hCoV-19/England/OXON-F4670A/2020 | K | 1804 | C | 1 | 20201216 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | K | 1804 | S | 4 | 20220804 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | K | 1804 | V | 1 | 20201102 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | K | 1804 | L | 3 | 20210807 |
| EPI_ISL_18875097 | NSP3 | hCoV-19/Canada/BC-BCCDC-696636/2024 | N | 1805 | H | 83 | 20240116 |
| EPI_ISL_18164334 | NSP3 | hCoV-19/USA/TX-HMH-M-131866/2023 | N | 1805 | R | 5 | 20230817 |
| EPI_ISL_16887784 | NSP3 | hCoV-19/Australia/NSW-ICPMR-41987/2023 | N | 1805 | insQRA | 1 | 20230131 |
| EPI_ISL_18840301 | NSP3 | hCoV-19/env/Ukraine/81023/2023 | N | 1805 | del | 30 | 20231002 |
| EPI_ISL_6565295 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02449576-10/2021 | N | 1805 | Y | 19 | 20211003 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | N | 1805 | M | 22 | 20230401 |
| EPI_ISL_19550819 | NSP3 | hCoV-19/USA/CA-SCPHL-24WGS00917/2024 | N | 1805 | D | 163 | 20241028 |
| EPI_ISL_12955361 | NSP3 | hCoV-19/Russia/CU-CRIE-7730687633/2022 | N | 1805 | P | 2 | 20220214 |
| EPI_ISL_15680691 | NSP3 | hCoV-19/Hong Kong/HK-HKPU-PUN519924447/2022 | N | 1805 | insNAG | 1 | 20220830 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | N | 1805 | L | 4 | 20211012 |
| EPI_ISL_19797325 | NSP3 | hCoV-19/Finland/THL-01496/2025 | N | 1805 | S | 389 | 20250214 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | N | 1805 | insC | 1 | 20210805 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | N | 1805 | V | 4 | 20220804 |
| EPI_ISL_18068019 | NSP3 | hCoV-19/South Korea/KDCA254510/2023 | N | 1805 | K | 53 | 20230712 |
| EPI_ISL_12403367 | NSP3 | hCoV-19/England/PHEC-YYR3QJJ/2022 | N | 1805 | B | 6 | 20220417 |
| EPI_ISL_18546899 | NSP3 | hCoV-19/USA/TX-HMH-M-135065/2023 | N | 1805 | E | 92 | 20231026 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | N | 1805 | Q | 3 | 20210807 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1805 | F | 1 | 20220210 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | N | 1805 | insstop | 1 | 20210921 |
| EPI_ISL_19751864 | NSP3 | hCoV-19/Denmark/DCGC-691796/2025 | N | 1805 | T | 138 | 20250127 |
| EPI_ISL_11145490 | NSP3 | hCoV-19/Indonesia/JT-Labkes-47FM/2022 | N | 1805 | I | 4 | 20220223 |
| EPI_ISL_16258476 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2026/2022 | N | 1805 | C | 5 | 20220802 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1806 | Y | 1 | 20210318 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | V | 1806 | R | 2 | 20210807 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | V | 1806 | Q | 1 | 20201102 |
| EPI_ISL_19292199 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000277801/2024 | V | 1806 | G | 16 | 20240625 |
| EPI_ISL_11887733 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-0695/2021 | V | 1806 | T | 1 | 20211228 |
| EPI_ISL_11925588 | NSP3 | hCoV-19/England/DHSC-CYB59RI/2022 | V | 1806 | I | 3 | 20220123 |
| EPI_ISL_19667348 | NSP3 | hCoV-19/Japan/FR047-0688/2024 | V | 1806 | L | 138 | 20240827 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | V | 1806 | insCPstop | 2 | 20230217 |
| EPI_ISL_11947881 | NSP3 | hCoV-19/England/DHSC-CYNSSIR/2022 | V | 1806 | insstopHstopG | 1 | 20220123 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | V | 1806 | insPstop | 1 | 20211009 |
| EPI_ISL_19410403 | NSP3 | hCoV-19/Italy/FVG-TS-65330459/2024 | V | 1806 | A | 229 | 20240806 |
| EPI_ISL_7547082 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-101221-1084/2021 | V | 1806 | K | 1 | 20211012 |
| EPI_ISL_18840301 | NSP3 | hCoV-19/env/Ukraine/81023/2023 | V | 1806 | del | 32 | 20231002 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | V | 1806 | N | 1 | 20220804 |
| EPI_ISL_18546899 | NSP3 | hCoV-19/USA/TX-HMH-M-135065/2023 | V | 1806 | C | 117 | 20231026 |
| EPI_ISL_19646256 | NSP3 | hCoV-19/Israel/ICH-741227187/2024 | V | 1806 | M | 860 | 20241227 |
| EPI_ISL_12955361 | NSP3 | hCoV-19/Russia/CU-CRIE-7730687633/2022 | V | 1806 | F | 3 | 20220214 |
| EPI_ISL_19232241 | NSP3 | hCoV-19/Spain/VC-VAHNSI-09_1060/2024 | V | 1806 | E | 50 | 20240410 |
| EPI_ISL_17675888 | NSP3 | hCoV-19/Mexico/DUR-UJEDFCQ_9_230429/2021 | V | 1806 | W | 1 | 20210724 |
| EPI_ISL_11145490 | NSP3 | hCoV-19/Indonesia/JT-Labkes-47FM/2022 | V | 1806 | H | 1 | 20220223 |
| EPI_ISL_19750377 | NSP3 | hCoV-19/Canada/QC-L00846012001/2025 | S | 1807 | F | 9258 | 20250215 |
| EPI_ISL_19786313 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56572/2025 | S | 1807 | P | 372 | 20250226 |
| EPI_ISL_19509262 | NSP3 | hCoV-19/Cyprus/BMV10757/2023 | S | 1807 | T | 8 | 20231013 |
| EPI_ISL_16509824 | NSP3 | hCoV-19/Chile/AR-140257/2022 | S | 1807 | K | 7 | 20221226 |
| EPI_ISL_19326652 | NSP3 | hCoV-19/France/PAC-RELAB-HCL724000333601/2024 | S | 1807 | Y | 159 | 20240717 |
| EPI_ISL_11947881 | NSP3 | hCoV-19/England/DHSC-CYNSSIR/2022 | S | 1807 | G | 1 | 20220123 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | S | 1807 | Q | 3 | 20230217 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 1807 | del | 23 | 20230217 |
| EPI_ISL_18546899 | NSP3 | hCoV-19/USA/TX-HMH-M-135065/2023 | S | 1807 | V | 96 | 20231026 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | S | 1807 | R | 1 | 20210803 |
| EPI_ISL_18840301 | NSP3 | hCoV-19/env/Ukraine/81023/2023 | S | 1807 | M | 4 | 20231002 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | S | 1807 | N | 5 | 20221229 |
| EPI_ISL_19719218 | NSP3 | hCoV-19/Italy/APU-IZSPB-PT8866/2025 | S | 1807 | A | 93 | 20250108 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | S | 1807 | stop | 2 | 20230116 |
| EPI_ISL_19361526 | NSP3 | hCoV-19/env/Ukraine/84303/2023 | S | 1807 | L | 18 | 20231218 |
| EPI_ISL_10858579 | NSP3 | hCoV-19/Turkey/HSGM-G2537/2022 | S | 1807 | C | 3 | 20220217 |
| EPI_ISL_5338253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-54674/2021 | S | 1807 | insstop | 4 | 20210811 |
| EPI_ISL_12610870 | NSP3 | hCoV-19/Turkey/HSGM-G8631/2022 | S | 1807 | I | 1 | 20220407 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | L | 1808 | stop | 20 | 20230401 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | L | 1808 | Q | 2 | 20210803 |
| EPI_ISL_5338253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-54674/2021 | L | 1808 | T | 5 | 20210811 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1808 | N | 1 | 20210318 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | L | 1808 | C | 8 | 20230117 |
| EPI_ISL_12136608 | NSP3 | hCoV-19/Mongolia/2163/2022 | L | 1808 | F | 33 | 20220210 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | L | 1808 | A | 1 | 20220804 |
| EPI_ISL_17425912 | NSP3 | hCoV-19/India/MH-CSIR-2931/2023 | L | 1808 | R | 6 | 20230401 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | L | 1808 | P | 2 | 20210717 |
| EPI_ISL_19361526 | NSP3 | hCoV-19/env/Ukraine/84303/2023 | L | 1808 | I | 10 | 20231218 |
| EPI_ISL_18527976 | NSP3 | hCoV-19/USA/AZ-ASPHL-3138/2023 | L | 1808 | V | 76 | 20231103 |
| EPI_ISL_18649042 | NSP3 | hCoV-19/USA/CO-CDPHE-41266913/2023 | L | 1808 | S | 60 | 20230908 |
| EPI_ISL_11145490 | NSP3 | hCoV-19/Indonesia/JT-Labkes-47FM/2022 | L | 1808 | insLVVXXXX | 1 | 20220223 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 1808 | del | 24 | 20230217 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | L | 1808 | M | 3 | 20230217 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 1808 | D | 2 | 20211006 |
| EPI_ISL_9350039 | NSP3 | hCoV-19/USA/NY-PRL-2022_0120_01B05/2022 | L | 1808 | J | 15 | 20220117 |
| EPI_ISL_19285217 | NSP3 | hCoV-19/USA/NY-URMC-O7S1P286-1/2024 | D | 1809 | Y | 355 | 20240707 |
| EPI_ISL_18840301 | NSP3 | hCoV-19/env/Ukraine/81023/2023 | D | 1809 | L | 5 | 20231002 |
| EPI_ISL_11926492 | NSP3 | hCoV-19/England/DHSC-CYBBUQN/2022 | D | 1809 | C | 2 | 20220115 |
| EPI_ISL_18719647 | NSP3 | hCoV-19/Canada/SK-RRPL-684037/2023 | D | 1809 | H | 37 | 20231206 |
| EPI_ISL_18546899 | NSP3 | hCoV-19/USA/TX-HMH-M-135065/2023 | D | 1809 | R | 93 | 20231026 |
| EPI_ISL_19773152 | NSP3 | hCoV-19/USA/TX-CDC-LC1133977/2025 | D | 1809 | N | 952 | 20250225 |
| EPI_ISL_11355436 | NSP3 | hCoV-19/France/GES-ChNa-210059856501/2021 | D | 1809 | stop | 1 | 20210717 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | D | 1809 | S | 4 | 20230217 |
| EPI_ISL_17955801 | NSP3 | hCoV-19/USA/TX-HMH-129390/2023 | D | 1809 | E | 57 | 20230611 |
| EPI_ISL_18265333 | NSP3 | hCoV-19/Netherlands/NH-AUMC-001377/2023 | D | 1809 | A | 16 | 20230911 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | D | 1809 | F | 1 | 20201214 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | D | 1809 | P | 2 | 20210807 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | D | 1809 | K | 3 | 20230217 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | D | 1809 | del | 25 | 20230217 |
| EPI_ISL_19612094 | NSP3 | hCoV-19/USA/CA-CDPH-500140433/2024 | D | 1809 | G | 158 | 20240708 |
| EPI_ISL_19361526 | NSP3 | hCoV-19/env/Ukraine/84303/2023 | D | 1809 | Q | 12 | 20231218 |
| EPI_ISL_5071027 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-47070/2021 | D | 1809 | V | 1 | 20210527 |
| EPI_ISL_5338253 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-54674/2021 | D | 1809 | M | 4 | 20210811 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | D | 1809 | T | 20 | 20230401 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | D | 1809 | insK | 1 | 20220812 |
| EPI_ISL_17393494 | NSP3 | hCoV-19/USA/NY-CDC-LC1032007/2023 | D | 1809 | B | 16 | 20230321 |
| EPI_ISL_19825333 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-26C-MM00045R/2025 | N | 1810 | D | 142 | 20250326 |
| EPI_ISL_18373103 | NSP3 | hCoV-19/Singapore/R68MR177/2023 | N | 1810 | B | 9 | 20230920 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | N | 1810 | del | 24 | 20230217 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | N | 1810 | M | 17 | 20230401 |
| EPI_ISL_9300547 | NSP3 | hCoV-19/USA/KS-KSU-0522/2022 | N | 1810 | I | 8 | 20220110 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | N | 1810 | stop | 2 | 20210807 |
| EPI_ISL_1878530 | NSP3 | hCoV-19/Denmark/DCGC-69959/2021 | N | 1810 | A | 3 | 20210419 |
| EPI_ISL_19643203 | NSP3 | hCoV-19/Spain/CL-UCHV-49527/2024 | N | 1810 | H | 111 | 20241010 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | N | 1810 | R | 5 | 20230116 |
| EPI_ISL_18546899 | NSP3 | hCoV-19/USA/TX-HMH-M-135065/2023 | N | 1810 | Q | 93 | 20231026 |
| EPI_ISL_17663187 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-US-568/2023 | N | 1810 | Y | 22 | 20230411 |
| EPI_ISL_17425912 | NSP3 | hCoV-19/India/MH-CSIR-2931/2023 | N | 1810 | C | 8 | 20230401 |
| EPI_ISL_19140314 | NSP3 | hCoV-19/Canada/AB-ABPHL-117364/2024 | N | 1810 | T | 52 | 20240505 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | N | 1810 | L | 2 | 20210803 |
| EPI_ISL_19542258 | NSP3 | hCoV-19/USA/TX-UHS-UTHSA12086-P0/2024 | N | 1810 | S | 196 | 20241012 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | N | 1810 | V | 1 | 20210319 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | N | 1810 | E | 1 | 20220804 |
| EPI_ISL_18644607 | NSP3 | hCoV-19/USA/NY-CDC-QDX88486107/2023 | N | 1810 | K | 205 | 20231203 |
| EPI_ISL_19526809 | NSP3 | hCoV-19/Australia/QLD0x014C8E/2024 | V | 1811 | I | 1320 | 20241019 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1811 | N | 1 | 20210318 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | V | 1811 | S | 18 | 20230401 |
| EPI_ISL_12836536 | NSP3 | hCoV-19/env/USA/CA-SEARCH-87145/2022 | V | 1811 | F | 5 | 20220404 |
| EPI_ISL_17425912 | NSP3 | hCoV-19/India/MH-CSIR-2931/2023 | V | 1811 | L | 13 | 20230401 |
| EPI_ISL_19312904 | NSP3 | hCoV-19/env/Ukraine/84661/2024 | V | 1811 | G | 2 | 20240205 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | V | 1811 | stop | 1 | 20230116 |
| EPI_ISL_10594386 | NSP3 | hCoV-19/France/GES-HMN-22022180429/2022 | V | 1811 | D | 3 | 20220214 |
| EPI_ISL_18546899 | NSP3 | hCoV-19/USA/TX-HMH-M-135065/2023 | V | 1811 | C | 97 | 20231026 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | V | 1811 | T | 4 | 20230217 |
| EPI_ISL_19806277 | NSP3 | hCoV-19/Japan/FR023-0415/2024 | V | 1811 | A | 312 | 20241004 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | V | 1811 | Y | 9 | 20230117 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 1811 | del | 25 | 20230217 |
| EPI_ISL_1913079 | NSP3 | hCoV-19/Morocco/FMP-225/2021 | V | 1811 | H | 1 | 20210319 |
| EPI_ISL_11947881 | NSP3 | hCoV-19/England/DHSC-CYNSSIR/2022 | V | 1811 | insXXXXX | 1 | 20220123 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | V | 1811 | insN | 1 | 20210921 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 1811 | M | 4 | 20221229 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | L | 1812 | insP | 1 | 20210805 |
| EPI_ISL_3009794 | NSP3 | hCoV-19/India/CT-ILSGS03634/2021 | L | 1812 | J | 2 | 20210410 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | L | 1812 | M | 8 | 20230217 |
| EPI_ISL_19637076 | NSP3 | hCoV-19/Brazil/DF-LACENDF-530135901/2024 | L | 1812 | I | 49 | 20240916 |
| EPI_ISL_9888124 | NSP3 | hCoV-19/Cote d'Ivoire/208914-cv073/2021 | L | 1812 | P | 1 | 20210217 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | L | 1812 | Y | 20 | 20230401 |
| EPI_ISL_19496376 | NSP3 | hCoV-19/env/Uruguay/LEVVZ-660/2023 | L | 1812 | F | 28 | 20230619 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | L | 1812 | E | 2 | 20220804 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | L | 1812 | del | 26 | 20230217 |
| EPI_ISL_8083713 | NSP3 | hCoV-19/USA/LA-OD-3526012/2021 | L | 1812 | insTstopA | 1 | 20211213 |
| EPI_ISL_18239907 | NSP3 | hCoV-19/USA/UT-UPHL-230905340195/2023 | L | 1812 | S | 10 | 20230828 |
| EPI_ISL_10858579 | NSP3 | hCoV-19/Turkey/HSGM-G2537/2022 | L | 1812 | A | 2 | 20220217 |
| EPI_ISL_18997981 | NSP3 | hCoV-19/Hubei/HCDC-JM4162/2024 | L | 1812 | V | 83 | 20240313 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | L | 1812 | stop | 3 | 20230307 |
| EPI_ISL_9973310 | NSP3 | hCoV-19/USA/NC-WFSM-1085-2529/2022 | L | 1812 | R | 1 | 20220205 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 1812 | C | 2 | 20221229 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 1812 | N | 2 | 20211006 |
| EPI_ISL_9628085 | NSP3 | hCoV-19/USA/NM-CDC-QDX32931645/2022 | S | 1813 | Q | 3 | 20220112 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 1813 | V | 1 | 20210318 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | S | 1813 | G | 1 | 20220812 |
| EPI_ISL_18379988 | NSP3 | hCoV-19/USA/IL-RIPHL_32418_G/2023 | S | 1813 | Y | 98 | 20230910 |
| EPI_ISL_19749672 | NSP3 | hCoV-19/USA/NY-CDC-QDX31410827/2025 | S | 1813 | P | 1459 | 20250204 |
| EPI_ISL_19777551 | NSP3 | hCoV-19/USA/NE-RP251924/2025 | S | 1813 | F | 1112 | 20250307 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1813 | L | 27 | 20230401 |
| EPI_ISL_19745850 | NSP3 | hCoV-19/USA/NY-SUNYQB-X566208/2025 | S | 1813 | A | 313 | 20250129 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | S | 1813 | K | 1 | 20211006 |
| EPI_ISL_18546899 | NSP3 | hCoV-19/USA/TX-HMH-M-135065/2023 | S | 1813 | I | 95 | 20231026 |
| EPI_ISL_19496376 | NSP3 | hCoV-19/env/Uruguay/LEVVZ-660/2023 | S | 1813 | del | 31 | 20230619 |
| EPI_ISL_17705395 | NSP3 | hCoV-19/USA/MI-UM-L364058994/2023 | S | 1813 | R | 7 | 20230404 |
| EPI_ISL_18385931 | NSP3 | hCoV-19/USA/NY-Wadsworth-23058434-01/2023 | S | 1813 | C | 18 | 20231003 |
| EPI_ISL_18949341 | NSP3 | hCoV-19/Vietnam/NHTD-OUCRU4211/2023 | S | 1813 | T | 23 | 20231113 |
| EPI_ISL_6275345 | NSP3 | hCoV-19/England/PHEC-3S054S1B/2021 | S | 1813 | insstop | 1 | 20211101 |
| EPI_ISL_18840301 | NSP3 | hCoV-19/env/Ukraine/81023/2023 | S | 1813 | N | 6 | 20231002 |
| EPI_ISL_19758295 | NSP3 | hCoV-19/USA/MN-MDH-46258/2025 | T | 1814 | I | 1123 | 20250209 |
| EPI_ISL_15400514 | NSP3 | hCoV-19/Japan/PG-371044/2022 | T | 1814 | P | 4 | 20220903 |
| EPI_ISL_19544103 | NSP3 | hCoV-19/Canada/BC-BCCDC-747727/2024 | T | 1814 | A | 580 | 20241030 |
| EPI_ISL_19750654 | NSP3 | hCoV-19/Hong Kong/VB25063128/2025 | T | 1814 | N | 285 | 20250218 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | T | 1814 | L | 25 | 20230401 |
| EPI_ISL_18546899 | NSP3 | hCoV-19/USA/TX-HMH-M-135065/2023 | T | 1814 | Y | 103 | 20231026 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | T | 1814 | K | 3 | 20230217 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | T | 1814 | insSL | 1 | 20211229 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 1814 | V | 2 | 20230116 |
| EPI_ISL_18840301 | NSP3 | hCoV-19/env/Ukraine/81023/2023 | T | 1814 | C | 6 | 20231002 |
| EPI_ISL_19409490 | NSP3 | hCoV-19/Hubei/HCDC-JM6963/2024 | T | 1814 | S | 19 | 20240902 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | T | 1814 | H | 1 | 20210118 |
| EPI_ISL_17425912 | NSP3 | hCoV-19/India/MH-CSIR-2931/2023 | T | 1814 | F | 8 | 20230401 |
| EPI_ISL_8812964 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-050821-1191/2021 | T | 1814 | insL | 1 | 20210508 |
| EPI_ISL_19496376 | NSP3 | hCoV-19/env/Uruguay/LEVVZ-660/2023 | T | 1814 | del | 36 | 20230619 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | T | 1814 | R | 1 | 20210921 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | F | 1815 | I | 3 | 20230217 |
| EPI_ISL_8329838 | NSP3 | hCoV-19/Pakistan/DUHS19/2021 | F | 1815 | R | 1 | 20211225 |
| EPI_ISL_18840301 | NSP3 | hCoV-19/env/Ukraine/81023/2023 | F | 1815 | H | 6 | 20231002 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | F | 1815 | A | 1 | 20220804 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1815 | T | 1 | 20210318 |
| EPI_ISL_6275345 | NSP3 | hCoV-19/England/PHEC-3S054S1B/2021 | F | 1815 | M | 2 | 20211101 |
| EPI_ISL_19014001 | NSP3 | hCoV-19/Japan/7113194_S18/2023 | F | 1815 | C | 7 | 20231115 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | F | 1815 | del | 35 | 20230217 |
| EPI_ISL_17425912 | NSP3 | hCoV-19/India/MH-CSIR-2931/2023 | F | 1815 | Y | 18 | 20230401 |
| EPI_ISL_14470570 | NSP3 | hCoV-19/England/LSPA-3F57406/2022 | F | 1815 | V | 5 | 20220808 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | F | 1815 | S | 8 | 20230217 |
| EPI_ISL_19753266 | NSP3 | hCoV-19/USA/CA-PFZ04450/2025 | F | 1815 | L | 227 | 20250201 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1815 | P | 1 | 20201214 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | I | 1816 | C | 1 | 20210921 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1816 | P | 1 | 20210318 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | I | 1816 | K | 1 | 20220203 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | I | 1816 | N | 4 | 20230117 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 1816 | L | 24 | 20230101 |
| EPI_ISL_19014001 | NSP3 | hCoV-19/Japan/7113194_S18/2023 | I | 1816 | S | 5 | 20231115 |
| EPI_ISL_16560202 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | I | 1816 | insF | 1 | 20230101 |
| EPI_ISL_19633670 | NSP3 | hCoV-19/Canada/BC-BCCDC-757428/2024 | I | 1816 | T | 410 | 20241205 |
| EPI_ISL_11940935 | NSP3 | hCoV-19/England/DHSC-CYDTQB6/2022 | I | 1816 | insVNGVRRSFYV | 1 | 20220103 |
| EPI_ISL_19082060 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140728/2024 | I | 1816 | insFS | 107 | 20240404 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | I | 1816 | Q | 5 | 20211229 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | I | 1816 | del | 37 | 20230217 |
| EPI_ISL_18874941 | NSP3 | hCoV-19/USA/TX-HMH-M-138128/2024 | I | 1816 | F | 44 | 20240120 |
| EPI_ISL_19785623 | NSP3 | hCoV-19/Brazil/DF-LACENDF-530151833/2025 | I | 1816 | V | 668 | 20250207 |
| EPI_ISL_18268998 | NSP3 | hCoV-19/USA/MS-MSPHL-0527/2023 | I | 1816 | M | 7 | 20230809 |
| EPI_ISL_18546899 | NSP3 | hCoV-19/USA/TX-HMH-M-135065/2023 | I | 1816 | Y | 115 | 20231026 |
| EPI_ISL_17372563 | NSP3 | hCoV-19/India/TN-SPHL-2860/2023 | I | 1816 | R | 1 | 20230307 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | S | 1817 | M | 1 | 20220203 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | S | 1817 | F | 9 | 20211009 |
| EPI_ISL_12174847 | NSP3 | hCoV-19/USA/NY-PBRI-C22A020/2022 | S | 1817 | E | 1 | 20220411 |
| EPI_ISL_19803220 | NSP3 | hCoV-19/env/Germany/BY-LGL-6528477/2025 | S | 1817 | L | 1199 | 20250312 |
| EPI_ISL_12291390 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1124/2022 | S | 1817 | Y | 2 | 20220117 |
| EPI_ISL_19795789 | NSP3 | hCoV-19/USA/MA-MASPHL-13764/2025 | S | 1817 | A | 156 | 20250220 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | S | 1817 | insstop | 1 | 20210815 |
| EPI_ISL_9823818 | NSP3 | hCoV-19/England/MILK-3587AC9/2022 | S | 1817 | stop | 5 | 20220204 |
| EPI_ISL_18874941 | NSP3 | hCoV-19/USA/TX-HMH-M-138128/2024 | S | 1817 | Q | 34 | 20240120 |
| EPI_ISL_19681388 | NSP3 | hCoV-19/Germany/BY-RKI-I-1147263/2024 | S | 1817 | T | 46 | 20241216 |
| EPI_ISL_17522208 | NSP3 | hCoV-19/Spain/CL-39845/2022 | S | 1817 | P | 46 | 20221226 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | S | 1817 | R | 1 | 20230217 |
| EPI_ISL_3421852 | NSP3 | hCoV-19/England/OXON-FA8C61/2020 | S | 1817 | H | 1 | 20201102 |
| EPI_ISL_18840301 | NSP3 | hCoV-19/env/Ukraine/81023/2023 | S | 1817 | N | 7 | 20231002 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | S | 1817 | K | 6 | 20230117 |
| EPI_ISL_9243788 | NSP3 | hCoV-19/Italy/CAM-INTPas-C187/2022 | S | 1817 | W | 1 | 20220110 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 1817 | del | 35 | 20230217 |
| EPI_ISL_14583735 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS.22.16499/2022 | A | 1818 | P | 3 | 20220726 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | A | 1818 | del | 76 | 20230217 |
| EPI_ISL_5274284 | NSP3 | hCoV-19/England/PHEC-3K044KEF/2021 | A | 1818 | stop | 1 | 20210921 |
| EPI_ISL_16299044 | NSP3 | hCoV-19/Japan/PG-416689/2022 | A | 1818 | E | 8 | 20221207 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | A | 1818 | F | 3 | 20230116 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | A | 1818 | M | 1 | 20210326 |
| EPI_ISL_18874941 | NSP3 | hCoV-19/USA/TX-HMH-M-138128/2024 | A | 1818 | Q | 34 | 20240120 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | A | 1818 | L | 10 | 20220210 |
| EPI_ISL_19829147 | NSP3 | hCoV-19/USA/NJ-CDC-LC1136508/2025 | A | 1818 | V | 1497 | 20250402 |
| EPI_ISL_19808526 | NSP3 | hCoV-19/Canada/ON-PHL-202504879/2025 | A | 1818 | T | 1416 | 20250313 |
| EPI_ISL_19082060 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140728/2024 | A | 1818 | S | 244 | 20240404 |
| EPI_ISL_17480712 | NSP3 | hCoV-19/France/HDF-IPP09017/2023 | A | 1818 | G | 15 | 20230327 |
| EPI_ISL_14999068 | NSP3 | hCoV-19/India/TN-ICMR-INSACOG-SPHL1101/2021 | A | 1818 | R | 2 | 20211009 |
| EPI_ISL_17372568 | NSP3 | hCoV-19/India/TN-SPHL-2891/2023 | A | 1819 | stop | 3 | 20230303 |
| EPI_ISL_19752669 | NSP3 | hCoV-19/USA/MI-UM-10061871804/2025 | A | 1819 | V | 2271 | 20250118 |
| EPI_ISL_13076302 | NSP3 | hCoV-19/France/GES-HMN-22052110244/2022 | A | 1819 | insYTX | 1 | 20220419 |
| EPI_ISL_17530271 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13897/2023 | A | 1819 | M | 1 | 20230403 |
| EPI_ISL_15511651 | NSP3 | hCoV-19/USA/NJ-CDC-QDX42511610/2022 | A | 1819 | I | 6 | 20221015 |
| EPI_ISL_7547074 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-100921-1039/2021 | A | 1819 | Q | 3 | 20211009 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | A | 1819 | C | 3 | 20230217 |
| EPI_ISL_19806759 | NSP3 | hCoV-19/Spain/CL-UCHV-49761/2025 | A | 1819 | T | 3479 | 20250107 |
| EPI_ISL_7953477 | NSP3 | hCoV-19/England/PHEC-3V073V85/2021 | A | 1819 | F | 1 | 20211210 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | A | 1819 | K | 3 | 20220804 |
| EPI_ISL_19784534 | NSP3 | hCoV-19/Australia/QLD0x015314/2025 | A | 1819 | S | 185 | 20250223 |
| EPI_ISL_18255099 | NSP3 | hCoV-19/Pakistan/PACP-B13-S01/2023 | A | 1819 | E | 4 | 20230321 |
| EPI_ISL_3471372 | NSP3 | hCoV-19/Slovakia/UVZ_PL31_G7_15508/2021 | A | 1819 | D | 3 | 20210728 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | A | 1819 | del | 50 | 20230217 |
| EPI_ISL_14583719 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS.22.16374/2022 | A | 1819 | G | 10 | 20220724 |
| EPI_ISL_18874941 | NSP3 | hCoV-19/USA/TX-HMH-M-138128/2024 | A | 1819 | L | 42 | 20240120 |
| EPI_ISL_18255149 | NSP3 | hCoV-19/Pakistan/PACP-B13_S09/2023 | A | 1819 | P | 4 | 20230316 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | R | 1820 | S | 6 | 20210813 |
| EPI_ISL_17530271 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13897/2023 | R | 1820 | A | 2 | 20230403 |
| EPI_ISL_12145023 | NSP3 | hCoV-19/Turkey/HSGM-3GS1349/2022 | R | 1820 | K | 6 | 20220312 |
| EPI_ISL_18255099 | NSP3 | hCoV-19/Pakistan/PACP-B13-S01/2023 | R | 1820 | del | 54 | 20230321 |
| EPI_ISL_16575560 | NSP3 | hCoV-19/Japan/65691/2022 | R | 1820 | E | 3 | 20220624 |
| EPI_ISL_17466166 | NSP3 | hCoV-19/India/CT-AIIMSR-VRDL-INSACOG-1165/2023 | R | 1820 | L | 320 | 20230404 |
| EPI_ISL_18497477 | NSP3 | hCoV-19/Spain/MD-HGUGM-64178699/2023 | R | 1820 | Q | 425 | 20231030 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | R | 1820 | insLG | 1 | 20210804 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | R | 1820 | insVCstopFRCRNstopRCCstop | 1 | 20211031 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | R | 1820 | insVFM | 1 | 20210118 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | R | 1820 | V | 1 | 20220804 |
| EPI_ISL_17522165 | NSP3 | hCoV-19/Spain/CL-41385/2023 | R | 1820 | W | 9 | 20230329 |
| EPI_ISL_3079120 | NSP3 | hCoV-19/England/OXON-FA30D3/2021 | R | 1820 | N | 1 | 20210707 |
| EPI_ISL_12291384 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1118/2022 | R | 1820 | C | 1 | 20220116 |
| EPI_ISL_17034982 | NSP3 | hCoV-19/USA/TX-HMH-M-125622/2023 | R | 1820 | P | 6 | 20230213 |
| EPI_ISL_18874941 | NSP3 | hCoV-19/USA/TX-HMH-M-138128/2024 | R | 1820 | G | 47 | 20240120 |
| EPI_ISL_12174847 | NSP3 | hCoV-19/USA/NY-PBRI-C22A020/2022 | R | 1820 | stop | 1 | 20220411 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | R | 1820 | M | 1 | 20211006 |
| EPI_ISL_13282063 | NSP3 | hCoV-19/USA/ID-IBL-656335/2020 | Q | 1821 | S | 1 | 20200915 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | Q | 1821 | A | 7 | 20210813 |
| EPI_ISL_17530271 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13897/2023 | Q | 1821 | V | 8 | 20230403 |
| EPI_ISL_18255099 | NSP3 | hCoV-19/Pakistan/PACP-B13-S01/2023 | Q | 1821 | del | 49 | 20230321 |
| EPI_ISL_19755414 | NSP3 | hCoV-19/Brazil/ES-LACENES-321701026/2025 | Q | 1821 | L | 152 | 20250115 |
| EPI_ISL_3717118 | NSP3 | hCoV-19/Nigeria/54gene8/2021 | Q | 1821 | insIGR | 1 | 20210421 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1821 | N | 2 | 20220210 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | Q | 1821 | insAstop | 1 | 20210807 |
| EPI_ISL_13722511 | NSP3 | hCoV-19/USA/NY-CDC-LC0742142/2022 | Q | 1821 | insNRG | 3 | 20220624 |
| EPI_ISL_17726366 | NSP3 | hCoV-19/Norway/Ahus-4592/2023 | Q | 1821 | P | 561 | 20230421 |
| EPI_ISL_18683356 | NSP3 | hCoV-19/Japan/PG-586170/2023 | Q | 1821 | E | 4 | 20231207 |
| EPI_ISL_19789328 | NSP3 | hCoV-19/Greece/PHLnetwork_6462/2024 | Q | 1821 | K | 112 | 20241204 |
| EPI_ISL_12636578 | NSP3 | hCoV-19/Israel/ICH-741220466/2022 | Q | 1821 | stop | 24 | 20220420 |
| EPI_ISL_19750622 | NSP3 | hCoV-19/Hong Kong/VB25043083/2025 | Q | 1821 | H | 347 | 20250203 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | Q | 1821 | T | 1 | 20230116 |
| EPI_ISL_12291390 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1124/2022 | Q | 1821 | D | 2 | 20220117 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | Q | 1821 | M | 1 | 20211031 |
| EPI_ISL_19622156 | NSP3 | hCoV-19/Brazil/PR-LACENPR-415821073/2024 | Q | 1821 | R | 1825 | 20241116 |
| EPI_ISL_11936374 | NSP3 | hCoV-19/England/DHSC-CYDDRPP/2022 | Q | 1821 | insKRT | 1 | 20220104 |
| EPI_ISL_16575560 | NSP3 | hCoV-19/Japan/65691/2022 | G | 1822 | stop | 2 | 20220624 |
| EPI_ISL_18716634 | NSP3 | hCoV-19/Poland/WWSSE4020/2023 | G | 1822 | K | 6 | 20231214 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | G | 1822 | I | 2 | 20211006 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | G | 1822 | N | 2 | 20230116 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | G | 1822 | A | 1 | 20220117 |
| EPI_ISL_12610870 | NSP3 | hCoV-19/Turkey/HSGM-G8631/2022 | G | 1822 | H | 1 | 20220407 |
| EPI_ISL_12955330 | NSP3 | hCoV-19/Russia/MAG-CRIE-7730614054/2022 | G | 1822 | C | 2 | 20220210 |
| EPI_ISL_19562935 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-143419/2024 | G | 1822 | R | 240 | 20241017 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | G | 1822 | L | 1 | 20210803 |
| EPI_ISL_2833850 | NSP3 | hCoV-19/Kuwait/KCCC-95460-3431387/2021 | G | 1822 | Q | 2 | 20210628 |
| EPI_ISL_19732634 | NSP3 | hCoV-19/Canada/ON-PHL-202503387/2025 | G | 1822 | E | 926 | 20250204 |
| EPI_ISL_17028576 | NSP3 | hCoV-19/Chile/AN-ISPC-123194/2021 | G | 1822 | Y | 1 | 20210701 |
| EPI_ISL_18255099 | NSP3 | hCoV-19/Pakistan/PACP-B13-S01/2023 | G | 1822 | del | 54 | 20230321 |
| EPI_ISL_19147468 | NSP3 | hCoV-19/Spain/AS-HUCA-232436837/2024 | G | 1822 | W | 61 | 20240501 |
| EPI_ISL_12291384 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1118/2022 | G | 1822 | S | 3 | 20220116 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1822 | D | 2 | 20220210 |
| EPI_ISL_15709666 | NSP3 | hCoV-19/env/USA/CA-SEARCH-91814/2022 | G | 1822 | V | 5 | 20220515 |
| EPI_ISL_19610147 | NSP3 | hCoV-19/Canada/AB-ABPHL-128165/2024 | F | 1823 | C | 25 | 20241125 |
| EPI_ISL_18255099 | NSP3 | hCoV-19/Pakistan/PACP-B13-S01/2023 | F | 1823 | W | 2 | 20230321 |
| EPI_ISL_17028576 | NSP3 | hCoV-19/Chile/AN-ISPC-123194/2021 | F | 1823 | N | 1 | 20210701 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | F | 1823 | R | 1 | 20211006 |
| EPI_ISL_11522505 | NSP3 | hCoV-19/Gabon/AA0638/2021 | F | 1823 | M | 4 | 20210401 |
| EPI_ISL_17530271 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-13897/2023 | F | 1823 | D | 2 | 20230403 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | F | 1823 | stop | 2 | 20211031 |
| EPI_ISL_13104037 | NSP3 | hCoV-19/Canada/AB-ABPHL-67596/2022 | F | 1823 | insAAG | 1 | 20220509 |
| EPI_ISL_18979644 | NSP3 | hCoV-19/Australia/QLD0x0140F0/2024 | F | 1823 | Y | 10 | 20240221 |
| EPI_ISL_19811956 | NSP3 | hCoV-19/Australia/QLD0x0153EE/2025 | F | 1823 | L | 1266 | 20250307 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | F | 1823 | G | 1 | 20230116 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1823 | P | 1 | 20201214 |
| EPI_ISL_17372458 | NSP3 | hCoV-19/India/TN-SPHL-2901/2023 | F | 1823 | K | 1 | 20230313 |
| EPI_ISL_18229009 | NSP3 | hCoV-19/France/OCC-HCL723000966201/2023 | F | 1823 | S | 138 | 20230814 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1823 | E | 1 | 20210318 |
| EPI_ISL_10466261 | NSP3 | hCoV-19/England/DHSC-CYYKCXS/2022 | F | 1823 | I | 3 | 20220214 |
| EPI_ISL_18322197 | NSP3 | hCoV-19/USA/TX-HMH-M-134091/2023 | F | 1823 | V | 84 | 20230916 |
| EPI_ISL_541709 | NSP3 | hCoV-19/India/MH-NIV-159293/2020 | F | 1823 | A | 1 | 20200811 |
| EPI_ISL_13956974 | NSP3 | hCoV-19/USA/FL-BPHL-10822/2022 | F | 1823 | insFVG | 1 | 20220602 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | F | 1823 | del | 47 | 20230217 |
| EPI_ISL_14422768 | NSP3 | hCoV-19/Germany/SN-RKI-I-946150/2022 | F | 1823 | insV | 5 | 20220622 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | V | 1824 | K | 2 | 20230116 |
| EPI_ISL_19795848 | NSP3 | hCoV-19/New Zealand/25YA0709/2025 | V | 1824 | I | 2908 | 20250312 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | V | 1824 | M | 1 | 20220812 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1824 | T | 1 | 20220210 |
| EPI_ISL_19317823 | NSP3 | hCoV-19/USA/TX-HMH-M-142183/2024 | V | 1824 | L | 80 | 20240705 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | V | 1824 | C | 9 | 20210813 |
| EPI_ISL_19361514 | NSP3 | hCoV-19/env/Ukraine/84296/2023 | V | 1824 | F | 167 | 20231211 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | V | 1824 | W | 1 | 20211229 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1824 | Q | 1 | 20201214 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | V | 1824 | E | 1 | 20210118 |
| EPI_ISL_17301423 | NSP3 | hCoV-19/Germany/MV-UMG-18212143/2021 | V | 1824 | G | 1 | 20210502 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 1824 | del | 45 | 20230217 |
| EPI_ISL_18081240 | NSP3 | hCoV-19/env/Germany/BY-LGL-5943495/2023 | V | 1824 | A | 6 | 20230710 |
| EPI_ISL_6860590 | NSP3 | hCoV-19/Israel/SMC-7022464/2021 | D | 1825 | V | 2 | 20211117 |
| EPI_ISL_4613112 | NSP3 | hCoV-19/Germany/NW-RKI-I-256360/2021 | D | 1825 | G | 5 | 20210917 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | D | 1825 | I | 25 | 20230401 |
| EPI_ISL_9582704 | NSP3 | hCoV-19/England/PLYM-34C6801/2022 | D | 1825 | B | 2 | 20220130 |
| EPI_ISL_17981762 | NSP3 | hCoV-19/Thailand/NIH-16-1462-7-02/2023 | D | 1825 | E | 48 | 20230525 |
| EPI_ISL_12955340 | NSP3 | hCoV-19/Russia/MAG-CRIE-7730613297/2022 | D | 1825 | H | 2 | 20220212 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | D | 1825 | T | 1 | 20230116 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | D | 1825 | F | 1 | 20220812 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | D | 1825 | R | 1 | 20200729 |
| EPI_ISL_10078911 | NSP3 | hCoV-19/USA/TN-ASC-210507560/2022 | D | 1825 | C | 1 | 20220104 |
| EPI_ISL_10833231 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-91122/2022 | D | 1825 | N | 2 | 20220211 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | D | 1825 | A | 1 | 20210118 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | D | 1825 | stop | 10 | 20211229 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | D | 1825 | S | 1 | 20210815 |
| EPI_ISL_16258476 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2026/2022 | D | 1825 | Q | 2 | 20220802 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | D | 1825 | insMstop | 1 | 20210803 |
| EPI_ISL_14806784 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-36992/2022 | D | 1825 | Y | 7 | 20220719 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | D | 1825 | del | 44 | 20230217 |
| EPI_ISL_19265449 | NSP3 | hCoV-19/Wales/CLIMB-CM7YMK4E/2024 | S | 1826 | L | 28 | 20240626 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1826 | V | 2 | 20220210 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | S | 1826 | C | 6 | 20220210 |
| EPI_ISL_11177867 | NSP3 | hCoV-19/USA/FL-Curative-227587/2022 | S | 1826 | stop | 5 | 20220304 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 1826 | D | 1 | 20210318 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | S | 1826 | E | 5 | 20230117 |
| EPI_ISL_19770783 | NSP3 | hCoV-19/USA/ND-NDDH-26084/2025 | S | 1826 | T | 24 | 20250108 |
| EPI_ISL_17795071 | NSP3 | hCoV-19/Jiangsu/NJCDC-320/2023 | S | 1826 | A | 1 | 20230425 |
| EPI_ISL_10858505 | NSP3 | hCoV-19/Turkey/HSGM-G2388/2022 | S | 1826 | P | 2 | 20220217 |
| EPI_ISL_3079023 | NSP3 | hCoV-19/England/OXON-FA2872/2021 | S | 1826 | G | 1 | 20210706 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1826 | Q | 27 | 20230401 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | S | 1826 | del | 35 | 20230217 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | S | 1826 | K | 1 | 20210803 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | S | 1826 | F | 9 | 20210813 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | D | 1827 | T | 1 | 20220812 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | D | 1827 | F | 3 | 20211006 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | D | 1827 | M | 65 | 20230401 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | D | 1827 | L | 1 | 20210803 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1827 | A | 1 | 20210318 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | D | 1827 | del | 35 | 20230217 |
| EPI_ISL_13257835 | NSP3 | hCoV-19/Kazakhstan/VOS-NRL-S2460/2022 | D | 1827 | V | 2 | 20220413 |
| EPI_ISL_8866828 | NSP3 | hCoV-19/USA/NY-PRL-2022_0104_05F02/2021 | D | 1827 | G | 2 | 20211229 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | D | 1827 | N | 13 | 20230117 |
| EPI_ISL_3588802 | NSP3 | hCoV-19/USA/ID-IBL-746526/2021 | D | 1827 | Q | 1 | 20210803 |
| EPI_ISL_16201012 | NSP3 | hCoV-19/Spain/RI-CIBIR-306395169-Run47/2022 | D | 1827 | B | 2 | 20221108 |
| EPI_ISL_17301423 | NSP3 | hCoV-19/Germany/MV-UMG-18212143/2021 | D | 1827 | P | 1 | 20210502 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | D | 1827 | stop | 5 | 20220210 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | D | 1827 | S | 1 | 20211031 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1827 | E | 6 | 20220210 |
| EPI_ISL_12955340 | NSP3 | hCoV-19/Russia/MAG-CRIE-7730613297/2022 | D | 1827 | H | 5 | 20220212 |
| EPI_ISL_10078911 | NSP3 | hCoV-19/USA/TN-ASC-210507560/2022 | D | 1827 | K | 1 | 20220104 |
| EPI_ISL_8803739 | NSP3 | hCoV-19/India/MH-NCCS-2748200031581/2021 | D | 1827 | R | 6 | 20210813 |
| EPI_ISL_11325477 | NSP3 | hCoV-19/Austria/LB-R00066-S098/2022 | D | 1827 | Y | 4 | 20220316 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1828 | G | 1 | 20220210 |
| EPI_ISL_11944873 | NSP3 | hCoV-19/England/DHSC-CYNAPP4/2022 | V | 1828 | insWXXXXX | 1 | 20220101 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1828 | N | 1 | 20210318 |
| EPI_ISL_17709582 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200418723N2/2022 | V | 1828 | insXXX | 1 | 20220616 |
| EPI_ISL_19755543 | NSP3 | hCoV-19/USA/CO-CDPHE-43017774/2025 | V | 1828 | I | 343 | 20250213 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | V | 1828 | K | 1 | 20210803 |
| EPI_ISL_19554519 | NSP3 | hCoV-19/India/JK-VRDL-GMCS-VD4354/2023 | V | 1828 | A | 93 | 20231227 |
| EPI_ISL_11949235 | NSP3 | hCoV-19/England/DHSC-CYY3XJY/2022 | V | 1828 | P | 1 | 20220116 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | V | 1828 | F | 6 | 20220210 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | V | 1828 | M | 10 | 20230117 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | V | 1828 | del | 28 | 20230217 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | V | 1828 | insstop | 2 | 20210812 |
| EPI_ISL_8681663 | NSP3 | hCoV-19/USA/ID-IBL-780838/2021 | V | 1828 | C | 5 | 20211229 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | V | 1828 | stop | 69 | 20230401 |
| EPI_ISL_3756843 | NSP3 | hCoV-19/USA/ID-IBL-747051/2021 | V | 1828 | insA | 1 | 20210806 |
| EPI_ISL_16148787 | NSP3 | hCoV-19/Germany/BW-RKI-I-1055181/2022 | V | 1828 | E | 4 | 20221024 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | V | 1828 | T | 2 | 20230116 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1828 | Y | 1 | 20201214 |
| EPI_ISL_19456495 | NSP3 | hCoV-19/USA/NY-Wadsworth-24053410-01/2024 | V | 1828 | L | 101 | 20240828 |
| EPI_ISL_18987889 | NSP3 | hCoV-19/env/Germany/BY-LGL-6166839/2024 | E | 1829 | K | 86 | 20240221 |
| EPI_ISL_18579836 | NSP3 | hCoV-19/Russia/KL-RII-MH147761S/2023 | E | 1829 | G | 31 | 20231011 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | E | 1829 | S | 2 | 20230116 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | E | 1829 | T | 9 | 20230117 |
| EPI_ISL_18299228 | NSP3 | hCoV-19/USA/MN-MDH-36251/2023 | E | 1829 | D | 279 | 20230910 |
| EPI_ISL_17825692 | NSP3 | hCoV-19/Australia/VIC-VIDRL-00005876/2022 | E | 1829 | A | 6 | 20221230 |
| EPI_ISL_14866014 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-114007/2022 | E | 1829 | V | 2 | 20220828 |
| EPI_ISL_16201331 | NSP3 | hCoV-19/Kuwait/batch2-Sample68/2022 | E | 1829 | stop | 6 | 20220912 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | E | 1829 | L | 2 | 20220812 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | E | 1829 | R | 10 | 20220210 |
| EPI_ISL_3448900 | NSP3 | hCoV-19/USA/UT-UPHL-210812098693/2021 | E | 1829 | Q | 3 | 20210316 |
| EPI_ISL_17275326 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45851/2023 | E | 1829 | del | 23 | 20230217 |
| EPI_ISL_17301423 | NSP3 | hCoV-19/Germany/MV-UMG-18212143/2021 | E | 1829 | P | 1 | 20210502 |
| EPI_ISL_17350529 | NSP3 | hCoV-19/England/BRBR-3270EC86/2023 | E | 1829 | Z | 7 | 20230321 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | E | 1829 | M | 1 | 20210803 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | T | 1830 | stop | 1 | 20220812 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | T | 1830 | del | 24 | 20230217 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 1830 | V | 2 | 20211006 |
| EPI_ISL_18256282 | NSP3 | hCoV-19/USA/TX-HMH-M-132346/2023 | T | 1830 | P | 14 | 20230823 |
| EPI_ISL_17803615 | NSP3 | hCoV-19/Israel/ICH-741197711/2023 | T | 1830 | A | 79 | 20230525 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | T | 1830 | L | 81 | 20230401 |
| EPI_ISL_19803731 | NSP3 | hCoV-19/USA/WI-WSLH-2500587/2025 | T | 1830 | N | 379 | 20250131 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | T | 1830 | C | 6 | 20230116 |
| EPI_ISL_18033906 | NSP3 | hCoV-19/Guangdong/GDCDC_GZ_0581/2023 | T | 1830 | S | 7 | 20230628 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | T | 1830 | H | 1 | 20211031 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | T | 1830 | K | 1 | 20210118 |
| EPI_ISL_19824279 | NSP3 | hCoV-19/South Korea/KDCA297269/2025 | T | 1830 | I | 21582 | 20250317 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | K | 1831 | L | 2 | 20210803 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | K | 1831 | V | 1 | 20220812 |
| EPI_ISL_18716499 | NSP3 | hCoV-19/Israel/ICH-741200352/2023 | K | 1831 | insMLL | 78 | 20231226 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 1831 | N | 15 | 20230116 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 1831 | insCRSstop | 1 | 20230116 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1831 | Y | 1 | 20210318 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | K | 1831 | del | 21 | 20230217 |
| EPI_ISL_12955330 | NSP3 | hCoV-19/Russia/MAG-CRIE-7730614054/2022 | K | 1831 | T | 3 | 20220210 |
| EPI_ISL_19254571 | NSP3 | hCoV-19/USA/CA-GBW-GKISBBBC88909/2024 | K | 1831 | R | 131 | 20240628 |
| EPI_ISL_3588792 | NSP3 | hCoV-19/USA/ID-IBL-746492/2021 | K | 1831 | Q | 1 | 20210805 |
| EPI_ISL_12308577 | NSP3 | hCoV-19/Russia/RYA-CRIE-7725528670/2022 | K | 1831 | E | 4 | 20220130 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1831 | D | 1 | 20201214 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | K | 1831 | stop | 6 | 20220210 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1831 | H | 1 | 20220210 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | K | 1831 | G | 1 | 20210118 |
| EPI_ISL_16201329 | NSP3 | hCoV-19/Kuwait/batch2-Sample66/2022 | K | 1831 | I | 3 | 20220912 |
| EPI_ISL_1415090 | NSP3 | hCoV-19/India/MH-NCCS-CLPL19868/2021 | K | 1831 | insVLL | 1 | 20210116 |
| EPI_ISL_17982519 | NSP3 | hCoV-19/Guatemala/1415-DLNS/2023 | D | 1832 | E | 12 | 20230618 |
| EPI_ISL_19342241 | NSP3 | hCoV-19/England/CLIMB-CM7YEWF5/2024 | D | 1832 | A | 51 | 20240722 |
| EPI_ISL_18530559 | NSP3 | hCoV-19/Spain/GA-CHUAC-11683/2023 | D | 1832 | Y | 62 | 20231113 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | D | 1832 | K | 5 | 20220210 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | D | 1832 | R | 1 | 20210114 |
| EPI_ISL_18963164 | NSP3 | hCoV-19/Spain/AN-PMC-39442/2024 | D | 1832 | S | 4 | 20240109 |
| EPI_ISL_3922804 | NSP3 | hCoV-19/USA/ID-IBL-636276/2020 | D | 1832 | I | 1 | 20200729 |
| EPI_ISL_18052440 | NSP3 | hCoV-19/Portugal/PT48934/2023 | D | 1832 | T | 2 | 20230710 |
| EPI_ISL_18378111 | NSP3 | hCoV-19/USA/MN-MDH-36688/2023 | D | 1832 | G | 71 | 20230923 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | D | 1832 | del | 22 | 20230217 |
| EPI_ISL_14420726 | NSP3 | hCoV-19/Germany/SN-RKI-I-943881/2022 | D | 1832 | insV | 6 | 20220412 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1832 | F | 1 | 20220210 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | D | 1832 | M | 12 | 20230217 |
| EPI_ISL_17101535 | NSP3 | hCoV-19/Canada/ON-PHL-23-13993/2023 | D | 1832 | B | 5 | 20230221 |
| EPI_ISL_18850846 | NSP3 | hCoV-19/New Zealand/24ZA0398/2023 | D | 1832 | N | 247 | 20231228 |
| EPI_ISL_17488824 | NSP3 | hCoV-19/Tianjin/TJCDC-0303-53/2023 | D | 1832 | H | 9 | 20230228 |
| EPI_ISL_5519806 | NSP3 | hCoV-19/USA/TN-CDC-ASC210089399/2021 | D | 1832 | V | 2 | 20210921 |
| EPI_ISL_11954113 | NSP3 | hCoV-19/England/DHSC-CYYNY9T/2022 | D | 1832 | insSAstopK | 1 | 20220102 |
| EPI_ISL_13729735 | NSP3 | hCoV-19/Israel/ICH-741235570/2022 | V | 1833 | D | 3 | 20220626 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | V | 1833 | Q | 1 | 20211006 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | V | 1833 | C | 2 | 20230116 |
| EPI_ISL_19791173 | NSP3 | hCoV-19/Brazil/MS-FIOCRUZ-FMS788/2025 | V | 1833 | I | 582 | 20250305 |
| EPI_ISL_18648263 | NSP3 | hCoV-19/Brazil/MS-FIOCRUZ-12942/2023 | V | 1833 | F | 64 | 20231121 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1833 | T | 1 | 20220210 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | V | 1833 | Y | 1 | 20211031 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1833 | K | 1 | 20201214 |
| EPI_ISL_2137749 | NSP3 | hCoV-19/USA/KS-KSU-9156-2/2021 | V | 1833 | N | 2 | 20210408 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | V | 1833 | insN | 1 | 20210118 |
| EPI_ISL_10675075 | NSP3 | hCoV-19/England/PHWC-PEOP6U/2022 | V | 1833 | A | 5 | 20220211 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | V | 1833 | del | 27 | 20230217 |
| EPI_ISL_19344936 | NSP3 | hCoV-19/Japan/FR027-0108/2024 | V | 1833 | L | 30 | 20240729 |
| EPI_ISL_19618614 | NSP3 | hCoV-19/South Africa/NICD-R08848/2024 | V | 1834 | A | 597 | 20241104 |
| EPI_ISL_18716499 | NSP3 | hCoV-19/Israel/ICH-741200352/2023 | V | 1834 | L | 100 | 20231226 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | V | 1834 | Y | 2 | 20211006 |
| EPI_ISL_953938 | NSP3 | hCoV-19/Ukraine/D01/2021 | V | 1834 | C | 1 | 20210114 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1834 | T | 2 | 20220210 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | V | 1834 | K | 1 | 20230116 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | V | 1834 | del | 17 | 20230217 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | V | 1834 | W | 1 | 20211031 |
| EPI_ISL_591033 | NSP3 | hCoV-19/USA/MD-MDH-0231/2020 | V | 1834 | R | 1 | 20200928 |
| EPI_ISL_19131285 | NSP3 | hCoV-19/env/Ukraine/83402/2023 | V | 1834 | F | 214 | 20231211 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | V | 1834 | stop | 9 | 20230217 |
| EPI_ISL_19718624 | NSP3 | hCoV-19/USA/CO-CDPHE-42909457/2025 | V | 1834 | I | 722 | 20250123 |
| EPI_ISL_18638736 | NSP3 | hCoV-19/Russia/TA-RII-MH150481S/2023 | V | 1834 | G | 12 | 20231031 |
| EPI_ISL_12584118 | NSP3 | hCoV-19/Turkey/HSGM-G8661/2022 | V | 1834 | D | 4 | 20220407 |
| EPI_ISL_18716499 | NSP3 | hCoV-19/Israel/ICH-741200352/2023 | E | 1835 | N | 98 | 20231226 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1835 | P | 2 | 20220210 |
| EPI_ISL_14099275 | NSP3 | hCoV-19/India/MH-INSACOG-CSIR-NEERI2217/2022 | E | 1835 | Q | 8 | 20220702 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | E | 1835 | del | 16 | 20230217 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | E | 1835 | H | 1 | 20210118 |
| EPI_ISL_18450962 | NSP3 | hCoV-19/env/Germany/BY-LGL-6016188/2023 | E | 1835 | stop | 5 | 20231009 |
| EPI_ISL_1909121 | NSP3 | hCoV-19/Morocco/FMP-272/2021 | E | 1835 | L | 1 | 20210422 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | E | 1835 | Y | 2 | 20201214 |
| EPI_ISL_18424240 | NSP3 | hCoV-19/USA/TX-HMH-134435/2023 | E | 1835 | V | 52 | 20230928 |
| EPI_ISL_19257949 | NSP3 | hCoV-19/Japan/FR082-0097/2024 | E | 1835 | A | 150 | 20240705 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | E | 1835 | T | 1 | 20210318 |
| EPI_ISL_19198412 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YJGPU/2024 | E | 1835 | K | 118 | 20240603 |
| EPI_ISL_16709319 | NSP3 | hCoV-19/England/BRBR-326A6F4C/2023 | E | 1835 | Z | 10 | 20230120 |
| EPI_ISL_14877729 | NSP3 | hCoV-19/Germany/HB-RKI-I-964624/2022 | E | 1835 | S | 4 | 20220815 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | E | 1835 | R | 9 | 20230217 |
| EPI_ISL_18790783 | NSP3 | hCoV-19/USA/OK-USAFSAM-S22090/2023 | E | 1835 | G | 343 | 20231228 |
| EPI_ISL_19706968 | NSP3 | hCoV-19/Greece/PHLnetwork_PEDY_THESSALIAS-12082/2024 | E | 1835 | D | 110 | 20241201 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | C | 1836 | insH | 59 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1836 | N | 3 | 20220210 |
| EPI_ISL_18080589 | NSP3 | hCoV-19/USA/CA-CDPH-500118630/2023 | C | 1836 | W | 38 | 20230529 |
| EPI_ISL_18461268 | NSP3 | hCoV-19/Thailand/NIH-21-1390-0-02/2022 | C | 1836 | R | 5 | 20221122 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | C | 1836 | M | 2 | 20220209 |
| EPI_ISL_16271140 | NSP3 | hCoV-19/USA/TX-HMH-M-119713/2022 | C | 1836 | stop | 3 | 20221210 |
| EPI_ISL_16201324 | NSP3 | hCoV-19/Kuwait/batch2-Sample60/2022 | C | 1836 | Y | 4 | 20220912 |
| EPI_ISL_19071004 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6673/2024 | C | 1836 | F | 8 | 20240321 |
| EPI_ISL_17182255 | NSP3 | hCoV-19/USA/HI-H2320287/2023 | C | 1836 | S | 3 | 20230218 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | C | 1836 | insSstopI | 1 | 20210806 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | C | 1836 | insN | 1 | 20210812 |
| EPI_ISL_3588727 | NSP3 | hCoV-19/USA/ID-IBL-746157/2021 | C | 1836 | A | 2 | 20210804 |
| EPI_ISL_18424240 | NSP3 | hCoV-19/USA/TX-HMH-134435/2023 | C | 1836 | V | 17 | 20230928 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | C | 1836 | L | 3 | 20220812 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | C | 1836 | I | 4 | 20220210 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | C | 1836 | del | 14 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1837 | S | 1 | 20220210 |
| EPI_ISL_999140 | NSP3 | hCoV-19/England/OXON-F568B9/2021 | L | 1837 | insMT | 1 | 20210114 |
| EPI_ISL_16201277 | NSP3 | hCoV-19/Kuwait/batch2-Sample6/2022 | L | 1837 | H | 15 | 20220830 |
| EPI_ISL_14496990 | NSP3 | hCoV-19/Israel/SMC-7098741/2022 | L | 1837 | P | 4 | 20220807 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | L | 1837 | del | 16 | 20230217 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | L | 1837 | insstopstop | 1 | 20211031 |
| EPI_ISL_19750444 | NSP3 | hCoV-19/Canada/QC-L00839478001/2025 | L | 1837 | F | 1006 | 20250129 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 1837 | N | 1 | 20211006 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | L | 1837 | M | 1 | 20220109 |
| EPI_ISL_1909121 | NSP3 | hCoV-19/Morocco/FMP-272/2021 | L | 1837 | K | 2 | 20210422 |
| EPI_ISL_4950492 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-5461/2021 | L | 1837 | Y | 1 | 20210822 |
| EPI_ISL_11950788 | NSP3 | hCoV-19/England/DHSC-CYYCXMZ/2022 | L | 1837 | insMC | 1 | 20220201 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1837 | D | 1 | 20201214 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | L | 1837 | V | 7 | 20230116 |
| EPI_ISL_19133226 | NSP3 | hCoV-19/Brazil/SP-IAL-357683220/2024 | L | 1837 | I | 120 | 20240416 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | L | 1837 | C | 9 | 20230217 |
| EPI_ISL_7143763 | NSP3 | hCoV-19/England/MILK-2C36D08/2021 | L | 1837 | J | 14 | 20211126 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | L | 1837 | R | 1 | 20210812 |
| EPI_ISL_11936267 | NSP3 | hCoV-19/England/DHSC-CYDD31P/2022 | L | 1837 | insVHTLVLVRX | 1 | 20220116 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | L | 1837 | stop | 2 | 20220209 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | K | 1838 | D | 7 | 20230117 |
| EPI_ISL_12040480 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-53/2022 | K | 1838 | S | 3 | 20220109 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | K | 1838 | insCH | 1 | 20220531 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | K | 1838 | stop | 9 | 20230217 |
| EPI_ISL_12610887 | NSP3 | hCoV-19/Turkey/HSGM-G8676/2022 | K | 1838 | E | 2 | 20220407 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | K | 1838 | del | 22 | 20230217 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | K | 1838 | L | 6 | 20230116 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | K | 1838 | N | 66 | 20230401 |
| EPI_ISL_19261138 | NSP3 | hCoV-19/Australia/SA1833242/2024 | K | 1838 | R | 166 | 20240705 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1838 | T | 2 | 20220210 |
| EPI_ISL_14997855 | NSP3 | hCoV-19/South Korea/KDCA117435/2022 | K | 1838 | Q | 11 | 20220828 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | K | 1838 | V | 5 | 20220210 |
| EPI_ISL_7969752 | NSP3 | hCoV-19/Germany/NI-IOV-60380889/2021 | K | 1838 | M | 2 | 20211209 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | K | 1838 | insXXTS | 1 | 20220110 |
| EPI_ISL_842177 | NSP3 | hCoV-19/England/QEUH-A8CA31/2020 | K | 1838 | I | 1 | 20201016 |
| EPI_ISL_19415141 | NSP3 | hCoV-19/env/Germany/BY-LGL-6333330/2024 | L | 1839 | F | 219 | 20240821 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1839 | Y | 5 | 20220210 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | L | 1839 | C | 8 | 20230117 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1839 | N | 1 | 20201214 |
| EPI_ISL_18224185 | NSP3 | hCoV-19/USA/NJ-GBW-H10-016-9491/2023 | L | 1839 | W | 5 | 20230827 |
| EPI_ISL_12955330 | NSP3 | hCoV-19/Russia/MAG-CRIE-7730614054/2022 | L | 1839 | stop | 2 | 20220210 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 1839 | A | 1 | 20211006 |
| EPI_ISL_19092749 | NSP3 | hCoV-19/South Korea/KDCA291950/2024 | L | 1839 | S | 149 | 20240409 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | L | 1839 | M | 13 | 20230217 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | L | 1839 | del | 28 | 20230217 |
| EPI_ISL_17621392 | NSP3 | hCoV-19/USA/VA-CDC-QDX49399481/2023 | L | 1839 | V | 20 | 20230422 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | L | 1839 | I | 14 | 20220531 |
| EPI_ISL_8318261 | NSP3 | hCoV-19/USA/ID-IBL-778487/2021 | S | 1840 | insSIstop | 1 | 20211203 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | S | 1840 | insTSIstop | 1 | 20210801 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | S | 1840 | del | 29 | 20230217 |
| EPI_ISL_842177 | NSP3 | hCoV-19/England/QEUH-A8CA31/2020 | S | 1840 | F | 1 | 20201016 |
| EPI_ISL_14953842 | NSP3 | hCoV-19/USA/TX-HMH-M-114850/2022 | S | 1840 | insQIstop | 4 | 20220902 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1840 | T | 65 | 20230401 |
| EPI_ISL_17798380 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-103639/2023 | S | 1840 | P | 5 | 20230531 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | S | 1840 | K | 1 | 20220209 |
| EPI_ISL_19770383 | NSP3 | hCoV-19/Spain/AS-HUCA-232517296/2025 | S | 1840 | stop | 7 | 20250227 |
| EPI_ISL_2903001 | NSP3 | hCoV-19/England/OXON-F876C4/2020 | S | 1840 | R | 1 | 20201012 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1840 | Y | 1 | 20220210 |
| EPI_ISL_15292719 | NSP3 | hCoV-19/India/MH-NCCS-2748700686840/2021 | S | 1840 | insILTstopK | 1 | 20211207 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | S | 1840 | C | 2 | 20210807 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | S | 1840 | N | 3 | 20220531 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | S | 1840 | G | 1 | 20210318 |
| EPI_ISL_7969752 | NSP3 | hCoV-19/Germany/NI-IOV-60380889/2021 | S | 1840 | V | 1 | 20211209 |
| EPI_ISL_18422385 | NSP3 | hCoV-19/Argentina/INEI125934/2023 | S | 1840 | A | 20 | 20230830 |
| EPI_ISL_16599733 | NSP3 | hCoV-19/USA/TX-HMH-122851/2023 | S | 1840 | L | 7 | 20230108 |
| EPI_ISL_18239420 | NSP3 | hCoV-19/South Korea/KDCA261429/2023 | H | 1841 | del | 65 | 20230820 |
| EPI_ISL_17227409 | NSP3 | hCoV-19/Henan/ZMDCDC-31/2023 | H | 1841 | L | 31 | 20230222 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | H | 1841 | I | 4 | 20220210 |
| EPI_ISL_842177 | NSP3 | hCoV-19/England/QEUH-A8CA31/2020 | H | 1841 | insF | 1 | 20201016 |
| EPI_ISL_14440960 | NSP3 | hCoV-19/India/TN-ICMR-NIRT-INSACOG-W61/2022 | H | 1841 | G | 1 | 20220131 |
| EPI_ISL_1051614 | NSP3 | hCoV-19/England/OXON-F61727/2021 | H | 1841 | F | 1 | 20210127 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | H | 1841 | stop | 59 | 20230401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | H | 1841 | S | 1 | 20210318 |
| EPI_ISL_15292710 | NSP3 | hCoV-19/India/MH-NCCS-2748700698874/2021 | H | 1841 | D | 2 | 20211211 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | H | 1841 | A | 5 | 20230117 |
| EPI_ISL_19812382 | NSP3 | hCoV-19/Germany/NW-RKI-I-1147944/2025 | H | 1841 | Y | 10636 | 20250313 |
| EPI_ISL_18213356 | NSP3 | hCoV-19/Qinghai/QHCDC-HSZ-369/2023 | H | 1841 | N | 35 | 20230821 |
| EPI_ISL_19532042 | NSP3 | hCoV-19/France/BFC-IPP11914/2024 | H | 1841 | R | 151 | 20241014 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 1841 | V | 1 | 20220210 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | H | 1841 | M | 1 | 20220209 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | H | 1841 | T | 1 | 20210118 |
| EPI_ISL_19335101 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143484/2024 | H | 1841 | Q | 58 | 20240725 |
| EPI_ISL_19478222 | NSP3 | hCoV-19/Japan/FR049-1047/2024 | Q | 1842 | R | 265 | 20241002 |
| EPI_ISL_3348775 | NSP3 | hCoV-19/USA/CA-CDC-FG-056556/2021 | Q | 1842 | E | 2 | 20210730 |
| EPI_ISL_19373012 | NSP3 | hCoV-19/Singapore/R50MQ86/2024 | Q | 1842 | K | 119 | 20240828 |
| EPI_ISL_17087798 | NSP3 | hCoV-19/Peru/CUS-INS-41046/2022 | Q | 1842 | P | 3 | 20221219 |
| EPI_ISL_17304574 | NSP3 | hCoV-19/USA/TX-HMH-M-127135/2023 | Q | 1842 | stop | 24 | 20230315 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | Q | 1842 | I | 4 | 20210812 |
| EPI_ISL_8813049 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110121-1229/2021 | Q | 1842 | N | 3 | 20211101 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1842 | S | 1 | 20220210 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | Q | 1842 | C | 3 | 20220210 |
| EPI_ISL_19522490 | NSP3 | hCoV-19/Wales/CLIMB-CM7Y8RHR/2024 | Q | 1842 | H | 1125 | 20241019 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | Q | 1842 | del | 43 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 1842 | F | 1 | 20210318 |
| EPI_ISL_19768888 | NSP3 | hCoV-19/USA/MA-BROAD-23007/2024 | Q | 1842 | L | 82 | 20241231 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | Q | 1842 | T | 1 | 20210118 |
| EPI_ISL_19825273 | NSP3 | hCoV-19/USA/NY-NYULH-22554/2025 | S | 1843 | F | 6939 | 20250406 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1843 | K | 1 | 20220210 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1843 | L | 61 | 20230401 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | S | 1843 | R | 1 | 20211006 |
| EPI_ISL_11948155 | NSP3 | hCoV-19/England/DHSC-CYNUEXF/2021 | S | 1843 | insLIVLRC | 1 | 20211225 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | S | 1843 | E | 1 | 20201214 |
| EPI_ISL_12175098 | NSP3 | hCoV-19/Hong Kong/VZ22085340/2022 | S | 1843 | P | 8 | 20220408 |
| EPI_ISL_19315534 | NSP3 | hCoV-19/Japan/FR302-1028/2024 | S | 1843 | Y | 23 | 20240716 |
| EPI_ISL_19727297 | NSP3 | hCoV-19/USA/NY-PRL-250211_82B07/2025 | S | 1843 | T | 11 | 20250130 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | S | 1843 | C | 24 | 20230116 |
| EPI_ISL_18299710 | NSP3 | hCoV-19/Belgium/UZB_54809195/2023 | S | 1843 | del | 40 | 20230914 |
| EPI_ISL_10103531 | NSP3 | hCoV-19/USA/AZ-ASU45278/2022 | S | 1843 | V | 12 | 20220112 |
| EPI_ISL_19463852 | NSP3 | hCoV-19/USA/NY-SUNYQB-X1099786/2024 | S | 1843 | A | 125 | 20241001 |
| EPI_ISL_3756847 | NSP3 | hCoV-19/USA/ID-IBL-746941/2021 | S | 1843 | N | 2 | 20210807 |
| EPI_ISL_17372599 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2616/2023 | D | 1844 | Q | 1 | 20230113 |
| EPI_ISL_15292719 | NSP3 | hCoV-19/India/MH-NCCS-2748700686840/2021 | D | 1844 | I | 1 | 20211207 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | D | 1844 | P | 3 | 20220210 |
| EPI_ISL_9519697 | NSP3 | hCoV-19/France/GES-HMN-22012190455/2022 | D | 1844 | S | 2 | 20220110 |
| EPI_ISL_19304084 | NSP3 | hCoV-19/Thailand/NIC_CBI_1694/2024 | D | 1844 | N | 46 | 20240708 |
| EPI_ISL_15809166 | NSP3 | hCoV-19/Russia/AD-RII-MH109383S/2022 | D | 1844 | A | 39 | 20221011 |
| EPI_ISL_3631656 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ10396/2021 | D | 1844 | F | 1 | 20210612 |
| EPI_ISL_16110476 | NSP3 | hCoV-19/Denmark/DCGC-622232/2022 | D | 1844 | Y | 22 | 20221208 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | D | 1844 | H | 12 | 20230117 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | D | 1844 | L | 63 | 20230401 |
| EPI_ISL_18299710 | NSP3 | hCoV-19/Belgium/UZB_54809195/2023 | D | 1844 | del | 35 | 20230914 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | D | 1844 | T | 2 | 20210118 |
| EPI_ISL_18923210 | NSP3 | hCoV-19/USA/MS-MSPHL-0115/2024 | D | 1844 | E | 29 | 20240202 |
| EPI_ISL_18775038 | NSP3 | hCoV-19/USA/CA-HLX-STM-F72CPZYJ5/2023 | D | 1844 | G | 181 | 20231208 |
| EPI_ISL_9300547 | NSP3 | hCoV-19/USA/KS-KSU-0522/2022 | D | 1844 | V | 2 | 20220110 |
| EPI_ISL_9643298 | NSP3 | hCoV-19/Scotland/QEUH-3515E79/2022 | D | 1844 | B | 8 | 20220201 |
| EPI_ISL_10045306 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344478/2022 | I | 1845 | N | 1 | 20220207 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1845 | G | 1 | 20220210 |
| EPI_ISL_19186229 | NSP3 | hCoV-19/Canada/BC-BCCDC-713816/2024 | I | 1845 | V | 550 | 20240519 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | I | 1845 | W | 1 | 20220110 |
| EPI_ISL_17674220 | NSP3 | hCoV-19/USA/TN-CDC-LC1041485/2023 | I | 1845 | J | 5 | 20230502 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | I | 1845 | stop | 6 | 20220210 |
| EPI_ISL_18846538 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-23A-MM00063R/2024 | I | 1845 | L | 794 | 20240123 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | I | 1845 | del | 27 | 20230217 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | I | 1845 | S | 1 | 20211006 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | I | 1845 | A | 60 | 20230401 |
| EPI_ISL_8803734 | NSP3 | hCoV-19/India/MH-NCCS-2750000379069/2021 | I | 1845 | R | 1 | 20210807 |
| EPI_ISL_13563919 | NSP3 | hCoV-19/USA/ID-IBL-824084/2022 | I | 1845 | C | 2 | 20220531 |
| EPI_ISL_17472403 | NSP3 | hCoV-19/France/ARA-HCL023054996401/2023 | I | 1845 | T | 42 | 20230331 |
| EPI_ISL_3631656 | NSP3 | hCoV-19/Thailand/Chonburi_SEQ10396/2021 | I | 1845 | K | 1 | 20210612 |
| EPI_ISL_19334596 | NSP3 | hCoV-19/Egypt/CPHL-EGY24127/2024 | I | 1845 | M | 340 | 20240624 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | E | 1846 | N | 11 | 20230117 |
| EPI_ISL_17275302 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45827/2023 | E | 1846 | K | 11 | 20230217 |
| EPI_ISL_2903001 | NSP3 | hCoV-19/England/OXON-F876C4/2020 | E | 1846 | F | 1 | 20201012 |
| EPI_ISL_19334596 | NSP3 | hCoV-19/Egypt/CPHL-EGY24127/2024 | E | 1846 | Q | 7 | 20240624 |
| EPI_ISL_15316453 | NSP3 | hCoV-19/Pakistan/12341082/2022 | E | 1846 | P | 1 | 20220812 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | E | 1846 | del | 34 | 20230217 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | E | 1846 | I | 65 | 20230401 |
| EPI_ISL_17232467 | NSP3 | hCoV-19/England/PHEC-YYEJ4FN/2023 | E | 1846 | Z | 10 | 20230304 |
| EPI_ISL_18403148 | NSP3 | hCoV-19/Ireland/D-BH-070047231/2023 | E | 1846 | G | 22 | 20231012 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | E | 1846 | R | 4 | 20220210 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 1846 | C | 1 | 20211006 |
| EPI_ISL_3543445 | NSP3 | hCoV-19/USA/ID-IBL-642217/2020 | E | 1846 | insHRstop | 1 | 20200812 |
| EPI_ISL_8294177 | NSP3 | hCoV-19/Portugal/PT24235/2021 | E | 1846 | V | 11 | 20211220 |
| EPI_ISL_18741853 | NSP3 | hCoV-19/env/Ukraine/80287/2023 | E | 1846 | stop | 6 | 20230724 |
| EPI_ISL_14530328 | NSP3 | hCoV-19/USA/CA-HLX-STM-JVD8Z96A3/2022 | E | 1846 | A | 14 | 20220726 |
| EPI_ISL_19511930 | NSP3 | hCoV-19/USA/MN-MDH-43574/2024 | E | 1846 | D | 1185 | 20241007 |
| EPI_ISL_15497344 | NSP3 | hCoV-19/Czech Republic/NRL_s6294/2022 | E | 1846 | S | 3 | 20221006 |
| EPI_ISL_17372618 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2618/2023 | E | 1846 | Y | 2 | 20230116 |
| EPI_ISL_19831974 | NSP3 | hCoV-19/Wales/CLIMB-CM7YMYJZ/2025 | V | 1847 | I | 1114 | 20250327 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | V | 1847 | del | 33 | 20230217 |
| EPI_ISL_18947930 | NSP3 | hCoV-19/Israel/SMC-7117203/2024 | V | 1847 | A | 53 | 20240222 |
| EPI_ISL_13329823 | NSP3 | hCoV-19/Germany/NI-IOV-1248124/2022 | V | 1847 | T | 2 | 20220612 |
| EPI_ISL_19819574 | NSP3 | hCoV-19/Australia/SA2496112/2025 | V | 1847 | F | 1247 | 20250319 |
| EPI_ISL_2723840 | NSP3 | hCoV-19/India/TN-CL-297_S108_R1_001/2021 | V | 1847 | G | 1 | 20210423 |
| EPI_ISL_8885209 | NSP3 | hCoV-19/Germany/NI-IOV-60394158/2022 | V | 1847 | D | 4 | 20220110 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | V | 1847 | stop | 1 | 20220110 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | V | 1847 | S | 2 | 20210812 |
| EPI_ISL_8803734 | NSP3 | hCoV-19/India/MH-NCCS-2750000379069/2021 | V | 1847 | Y | 1 | 20210807 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1847 | K | 1 | 20220210 |
| EPI_ISL_18633313 | NSP3 | hCoV-19/Australia/NSW-ICPMR-51767/2023 | V | 1847 | L | 22 | 20231122 |
| EPI_ISL_8619229 | NSP3 | hCoV-19/Germany/NI-IOV-60393359/2022 | V | 1847 | C | 1 | 20220108 |
| EPI_ISL_8803734 | NSP3 | hCoV-19/India/MH-NCCS-2750000379069/2021 | T | 1848 | W | 1 | 20210807 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | T | 1848 | V | 60 | 20230401 |
| EPI_ISL_19186316 | NSP3 | hCoV-19/env/Germany/BY-LGL-6247459/2024 | T | 1848 | I | 70 | 20240515 |
| EPI_ISL_13329823 | NSP3 | hCoV-19/Germany/NI-IOV-1248124/2022 | T | 1848 | P | 1 | 20220612 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1848 | L | 2 | 20220210 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | T | 1848 | Q | 5 | 20230117 |
| EPI_ISL_18250175 | NSP3 | hCoV-19/Slovakia/KE_23_00000272/2023 | T | 1848 | S | 10 | 20230815 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1848 | G | 1 | 20201214 |
| EPI_ISL_840251 | NSP3 | hCoV-19/England/OXON-F41B21/2020 | T | 1848 | N | 1 | 20201213 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | T | 1848 | del | 37 | 20230217 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | T | 1848 | Y | 2 | 20210812 |
| EPI_ISL_12751156 | NSP3 | hCoV-19/Austria/Medilab_412/2022 | G | 1849 | A | 11 | 20220511 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1849 | F | 1 | 20220210 |
| EPI_ISL_15292718 | NSP3 | hCoV-19/India/MH-NCCS-2748700686217/2021 | G | 1849 | stop | 8 | 20211206 |
| EPI_ISL_19823438 | NSP3 | hCoV-19/Japan/FR021-0248/2025 | G | 1849 | C | 4429 | 20250312 |
| EPI_ISL_19802673 | NSP3 | hCoV-19/Japan/FR055-0121/2025 | G | 1849 | S | 651 | 20250227 |
| EPI_ISL_840251 | NSP3 | hCoV-19/England/OXON-F41B21/2020 | G | 1849 | T | 1 | 20201213 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | G | 1849 | M | 1 | 20210526 |
| EPI_ISL_19353652 | NSP3 | hCoV-19/Singapore/R48MQ13/2024 | G | 1849 | V | 427 | 20240808 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | G | 1849 | del | 41 | 20240115 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | G | 1849 | I | 59 | 20230401 |
| EPI_ISL_8803734 | NSP3 | hCoV-19/India/MH-NCCS-2750000379069/2021 | G | 1849 | R | 2 | 20210807 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1849 | Q | 1 | 20210318 |
| EPI_ISL_19617601 | NSP3 | hCoV-19/USA/WI-WSLH-2402738/2024 | G | 1849 | D | 145 | 20241008 |
| EPI_ISL_17527082 | NSP3 | hCoV-19/Sweden/UUH-251677/2023 | D | 1850 | B | 5 | 20230207 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | D | 1850 | del | 37 | 20240115 |
| EPI_ISL_8803734 | NSP3 | hCoV-19/India/MH-NCCS-2750000379069/2021 | D | 1850 | stop | 3 | 20210807 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | D | 1850 | R | 1 | 20210812 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | D | 1850 | I | 9 | 20220210 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | D | 1850 | F | 1 | 20210526 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | D | 1850 | L | 1 | 20201214 |
| EPI_ISL_18352005 | NSP3 | hCoV-19/USA/MS-MSPHL-0762/2023 | D | 1850 | Y | 316 | 20230921 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | D | 1850 | A | 6 | 20230117 |
| EPI_ISL_9196492 | NSP3 | hCoV-19/Nigeria/PHR-LA-032/2021 | D | 1850 | H | 5 | 20211129 |
| EPI_ISL_14752642 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-113495/2022 | D | 1850 | V | 2 | 20220823 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | D | 1850 | S | 1 | 20211102 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | D | 1850 | T | 59 | 20230401 |
| EPI_ISL_16991688 | NSP3 | hCoV-19/USA/CA-CDPH-FS47308345/2023 | D | 1850 | E | 14 | 20230125 |
| EPI_ISL_15292718 | NSP3 | hCoV-19/India/MH-NCCS-2748700686217/2021 | D | 1850 | K | 6 | 20211206 |
| EPI_ISL_14772085 | NSP3 | hCoV-19/England/PHEC-YYGZ8RH/2022 | D | 1850 | N | 8 | 20220819 |
| EPI_ISL_3078832 | NSP3 | hCoV-19/England/OXON-FA104E/2021 | S | 1851 | M | 2 | 20210702 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | S | 1851 | N | 3 | 20230217 |
| EPI_ISL_18487883 | NSP3 | hCoV-19/Belgium/ULG-301478/2023 | S | 1851 | G | 9 | 20231102 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | S | 1851 | V | 2 | 20210812 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | S | 1851 | K | 6 | 20230117 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | S | 1851 | D | 1 | 20210526 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | S | 1851 | del | 32 | 20240115 |
| EPI_ISL_11951221 | NSP3 | hCoV-19/England/DHSC-CYYERYY/2021 | S | 1851 | T | 2 | 20211230 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | S | 1851 | stop | 8 | 20220210 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | S | 1851 | I | 63 | 20230401 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | S | 1851 | Y | 1 | 20211102 |
| EPI_ISL_14341467 | NSP3 | hCoV-19/Japan/PG-280316/2022 | S | 1851 | C | 5 | 20220706 |
| EPI_ISL_3588762 | NSP3 | hCoV-19/USA/ID-IBL-746266/2021 | S | 1851 | insI | 1 | 20210801 |
| EPI_ISL_18352005 | NSP3 | hCoV-19/USA/MS-MSPHL-0762/2023 | S | 1851 | R | 3 | 20230921 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | S | 1851 | L | 9 | 20220110 |
| EPI_ISL_18774937 | NSP3 | hCoV-19/USA/CA-HLX-STM-AEMEQDTEB/2023 | C | 1852 | F | 71 | 20231214 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | C | 1852 | W | 3 | 20211102 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1852 | P | 1 | 20210318 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | C | 1852 | H | 7 | 20220210 |
| EPI_ISL_19799896 | NSP3 | hCoV-19/USA/TX-HMH-M-147083/2024 | C | 1852 | Y | 251 | 20241228 |
| EPI_ISL_18228616 | NSP3 | hCoV-19/Turkey/HSGM-AA00522/2023 | C | 1852 | stop | 28 | 20230518 |
| EPI_ISL_17324716 | NSP3 | hCoV-19/Indonesia/JI-ITD-60756NT/2023 | C | 1852 | R | 15 | 20230131 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | C | 1852 | del | 32 | 20240115 |
| EPI_ISL_15292718 | NSP3 | hCoV-19/India/MH-NCCS-2748700686217/2021 | C | 1852 | L | 8 | 20211206 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | C | 1852 | S | 11 | 20230117 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | C | 1852 | V | 1 | 20210812 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | C | 1852 | K | 1 | 20210526 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1852 | G | 1 | 20220210 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | N | 1853 | stop | 4 | 20210812 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | N | 1853 | del | 45 | 20240115 |
| EPI_ISL_16815331 | NSP3 | hCoV-19/United Arab Emirates/BTC-6940/2021 | N | 1853 | G | 1 | 20210729 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | N | 1853 | D | 5 | 20211006 |
| EPI_ISL_10083052 | NSP3 | hCoV-19/USA/TN-ASC-210594124/2021 | N | 1853 | K | 2 | 20211227 |
| EPI_ISL_18352005 | NSP3 | hCoV-19/USA/MS-MSPHL-0762/2023 | N | 1853 | T | 4 | 20230921 |
| EPI_ISL_17953373 | NSP3 | hCoV-19/Thailand/NIC_CTI_POS2239/2023 | N | 1853 | Y | 26 | 20230614 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | N | 1853 | insstop | 1 | 20210812 |
| EPI_ISL_15292718 | NSP3 | hCoV-19/India/MH-NCCS-2748700686217/2021 | N | 1853 | A | 5 | 20211206 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1853 | L | 2 | 20220210 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | N | 1853 | E | 1 | 20210805 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | N | 1853 | R | 13 | 20220210 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | N | 1853 | H | 8 | 20230217 |
| EPI_ISL_17425891 | NSP3 | hCoV-19/India/MH-CSIR-2924/2023 | N | 1853 | S | 62 | 20230401 |
| EPI_ISL_999357 | NSP3 | hCoV-19/England/OXON-F5F531/2021 | N | 1853 | insI | 1 | 20210104 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | N | 1853 | V | 1 | 20210526 |
| EPI_ISL_7728790 | NSP3 | hCoV-19/Mexico/TAM_INER_IMSS_3196/2021 | N | 1853 | I | 3 | 20211119 |
| EPI_ISL_3980372 | NSP3 | hCoV-19/Sweden/UUH-000200123917/2021 | N | 1854 | T | 3 | 20210819 |
| EPI_ISL_16201299 | NSP3 | hCoV-19/Kuwait/batch2-Sample32/2022 | N | 1854 | Y | 1 | 20220830 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | N | 1854 | stop | 1 | 20211102 |
| EPI_ISL_7728790 | NSP3 | hCoV-19/Mexico/TAM_INER_IMSS_3196/2021 | N | 1854 | K | 4 | 20211119 |
| EPI_ISL_17554784 | NSP3 | hCoV-19/Indonesia/SU-MFMUSU-22-0238-LS/2023 | N | 1854 | S | 9 | 20230411 |
| EPI_ISL_15683290 | NSP3 | hCoV-19/Spain/MD-HGUGM-6787499/2022 | N | 1854 | B | 1 | 20221024 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1854 | Q | 2 | 20220210 |
| EPI_ISL_16075848 | NSP3 | hCoV-19/Sweden/6339548176/2022 | N | 1854 | D | 16 | 20221125 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | N | 1854 | R | 1 | 20211006 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | N | 1854 | V | 1 | 20201214 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | N | 1854 | I | 9 | 20230217 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | N | 1854 | del | 106 | 20240115 |
| EPI_ISL_8803734 | NSP3 | hCoV-19/India/MH-NCCS-2750000379069/2021 | N | 1854 | L | 4 | 20210807 |
| EPI_ISL_17031966 | NSP3 | hCoV-19/Hebei/SJZ-194/2023 | Y | 1855 | D | 2 | 20230220 |
| EPI_ISL_15292718 | NSP3 | hCoV-19/India/MH-NCCS-2748700686217/2021 | Y | 1855 | V | 6 | 20211206 |
| EPI_ISL_10080979 | NSP3 | hCoV-19/USA/TN-ASC-210651226/2022 | Y | 1855 | H | 2 | 20220205 |
| EPI_ISL_15026407 | NSP3 | hCoV-19/USA/IL-90922240/2022 | Y | 1855 | L | 4 | 20220907 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | Y | 1855 | I | 8 | 20230117 |
| EPI_ISL_16008559 | NSP3 | hCoV-19/Russia/OMS-RII-MH116244S/2022 | Y | 1855 | S | 6 | 20221125 |
| EPI_ISL_17304636 | NSP3 | hCoV-19/USA/TX-HMH-M-127149/2023 | Y | 1855 | F | 7 | 20230315 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | Y | 1855 | insWRstopLstopstop | 1 | 20210806 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1855 | T | 1 | 20220210 |
| EPI_ISL_10285551 | NSP3 | hCoV-19/England/LSPA-376F209/2022 | Y | 1855 | C | 1 | 20220217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Y | 1855 | E | 2 | 20210318 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 1855 | P | 2 | 20211006 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | Y | 1855 | W | 1 | 20210526 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | Y | 1855 | del | 95 | 20240115 |
| EPI_ISL_3421844 | NSP3 | hCoV-19/England/OXON-FA8B19/2020 | M | 1856 | P | 1 | 20201222 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | M | 1856 | S | 1 | 20220210 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | M | 1856 | A | 8 | 20230117 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | M | 1856 | stop | 2 | 20211102 |
| EPI_ISL_999117 | NSP3 | hCoV-19/England/OXON-F55D7F/2021 | M | 1856 | F | 1 | 20210112 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | M | 1856 | insPVGNIC | 1 | 20230217 |
| EPI_ISL_2735682 | NSP3 | hCoV-19/England/OXON-F84DFF/2021 | M | 1856 | E | 1 | 20210616 |
| EPI_ISL_19808438 | NSP3 | hCoV-19/Canada/ON-PHL-202504793/2025 | M | 1856 | I | 1565 | 20250310 |
| EPI_ISL_19610431 | NSP3 | hCoV-19/Canada/AB-ABPHL-128589/2024 | M | 1856 | V | 433 | 20241129 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | M | 1856 | del | 91 | 20240115 |
| EPI_ISL_15026407 | NSP3 | hCoV-19/USA/IL-90922240/2022 | M | 1856 | C | 5 | 20220907 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | M | 1856 | K | 1 | 20201214 |
| EPI_ISL_13482913 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-101661/2022 | M | 1856 | T | 6 | 20220618 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | M | 1856 | W | 7 | 20220210 |
| EPI_ISL_4285013 | NSP3 | hCoV-19/USA/CT-CDCBI-CRSP_4UBXI65NWOBAOCW2/2021 | M | 1856 | R | 1 | 20210907 |
| EPI_ISL_19653437 | NSP3 | hCoV-19/Estonia/TLCD-34037/2023 | M | 1856 | L | 97 | 20231211 |
| EPI_ISL_5038064 | NSP3 | hCoV-19/England/MILK-2049EB0/2021 | L | 1857 | T | 1 | 20211004 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | L | 1857 | M | 1 | 20211006 |
| EPI_ISL_15507747 | NSP3 | hCoV-19/Kuwait/Samples25/2022 | L | 1857 | J | 4 | 20220715 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | L | 1857 | stop | 2 | 20211102 |
| EPI_ISL_18133712 | NSP3 | hCoV-19/USA/WA-CDC-UW23080991753/2023 | L | 1857 | I | 21 | 20230809 |
| EPI_ISL_15026407 | NSP3 | hCoV-19/USA/IL-90922240/2022 | L | 1857 | S | 6 | 20220907 |
| EPI_ISL_17031966 | NSP3 | hCoV-19/Hebei/SJZ-194/2023 | L | 1857 | H | 5 | 20230220 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | L | 1857 | insstopLstopstop | 7 | 20220210 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | L | 1857 | F | 7 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1857 | Q | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1857 | E | 1 | 20210318 |
| EPI_ISL_18587848 | NSP3 | hCoV-19/Sweden/N-2A773281521/2023 | L | 1857 | P | 75 | 20231031 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | L | 1857 | Y | 3 | 20230217 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | L | 1857 | R | 7 | 20220210 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | L | 1857 | del | 91 | 20240115 |
| EPI_ISL_2735682 | NSP3 | hCoV-19/England/OXON-F84DFF/2021 | L | 1857 | N | 1 | 20210616 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1858 | L | 13 | 20230108 |
| EPI_ISL_18835952 | NSP3 | hCoV-19/USA/NY-CDC-QDX91125481/2024 | T | 1858 | S | 34 | 20240108 |
| EPI_ISL_15292718 | NSP3 | hCoV-19/India/MH-NCCS-2748700686217/2021 | T | 1858 | insICSP | 3 | 20211206 |
| EPI_ISL_17760500 | NSP3 | hCoV-19/Scotland/NHSGGC-0385/2023 | T | 1858 | N | 6 | 20230320 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1858 | G | 1 | 20220210 |
| EPI_ISL_19110111 | NSP3 | hCoV-19/Mexico/PUE_InDRE_FB797/2024 | T | 1858 | I | 10 | 20240311 |
| EPI_ISL_18423757 | NSP3 | hCoV-19/USA/TX-HMH-134922/2023 | T | 1858 | P | 68 | 20231011 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | T | 1858 | del | 32 | 20240115 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | T | 1858 | F | 1 | 20230217 |
| EPI_ISL_2735682 | NSP3 | hCoV-19/England/OXON-F84DFF/2021 | T | 1858 | K | 2 | 20210616 |
| EPI_ISL_17031966 | NSP3 | hCoV-19/Hebei/SJZ-194/2023 | T | 1858 | A | 7 | 20230220 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | Y | 1859 | E | 1 | 20211006 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | Y | 1859 | W | 5 | 20230117 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | Y | 1859 | del | 29 | 20240115 |
| EPI_ISL_8812974 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-042221-1189/2021 | Y | 1859 | Q | 2 | 20210422 |
| EPI_ISL_8813049 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110121-1229/2021 | Y | 1859 | insCSP | 2 | 20211101 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | Y | 1859 | V | 1 | 20230217 |
| EPI_ISL_17885435 | NSP3 | hCoV-19/Brazil/MS-REDE-67/2022 | Y | 1859 | H | 2 | 20220202 |
| EPI_ISL_3421844 | NSP3 | hCoV-19/England/OXON-FA8B19/2020 | Y | 1859 | K | 1 | 20201222 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | Y | 1859 | T | 1 | 20201214 |
| EPI_ISL_1585047 | NSP3 | hCoV-19/USA/KS-KSU-5037/2021 | Y | 1859 | N | 1 | 20210225 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Y | 1859 | S | 2 | 20220210 |
| EPI_ISL_18423757 | NSP3 | hCoV-19/USA/TX-HMH-134922/2023 | Y | 1859 | I | 75 | 20231011 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | Y | 1859 | L | 6 | 20220209 |
| EPI_ISL_11355408 | NSP3 | hCoV-19/France/GES-ChNa-210059743501/2021 | Y | 1859 | insC | 1 | 20210716 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | Y | 1859 | P | 1 | 20230217 |
| EPI_ISL_10824760 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-81706/2022 | Y | 1859 | F | 2 | 20220108 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | Y | 1859 | stop | 8 | 20220110 |
| EPI_ISL_18352005 | NSP3 | hCoV-19/USA/MS-MSPHL-0762/2023 | N | 1860 | H | 7 | 20230921 |
| EPI_ISL_8287759 | NSP3 | hCoV-19/Wales/PHWC-PGE69U/2021 | N | 1860 | B | 3 | 20211212 |
| EPI_ISL_18866604 | NSP3 | hCoV-19/Brunei/MGS-7123075835/2023 | N | 1860 | T | 85 | 20231103 |
| EPI_ISL_999357 | NSP3 | hCoV-19/England/OXON-F5F531/2021 | N | 1860 | L | 2 | 20210104 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | N | 1860 | Q | 5 | 20220110 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1860 | Y | 2 | 20220210 |
| EPI_ISL_10824556 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-84963/2022 | N | 1860 | K | 8 | 20220124 |
| EPI_ISL_3743152 | NSP3 | hCoV-19/USA/ID-IBL-744807/2021 | N | 1860 | insHLstop | 1 | 20210802 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | N | 1860 | V | 1 | 20211006 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | N | 1860 | A | 9 | 20220210 |
| EPI_ISL_17344360 | NSP3 | hCoV-19/Philippines/PH-VUI-147841/2023 | N | 1860 | S | 7 | 20230221 |
| EPI_ISL_18370789 | NSP3 | hCoV-19/env/Germany/BY-LGL-6009369/2023 | N | 1860 | D | 5 | 20230920 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1860 | P | 1 | 20210318 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | N | 1860 | stop | 2 | 20230217 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | N | 1860 | del | 25 | 20240115 |
| EPI_ISL_18981446 | NSP3 | hCoV-19/USA/TX-HMH-M-139734/2024 | N | 1860 | I | 4 | 20240216 |
| EPI_ISL_17031966 | NSP3 | hCoV-19/Hebei/SJZ-194/2023 | N | 1860 | E | 1 | 20230220 |
| EPI_ISL_12270893 | NSP3 | hCoV-19/France/PDL-HMN-22042050240/2022 | N | 1860 | C | 4 | 20220314 |
| EPI_ISL_19816943 | NSP3 | hCoV-19/Norway/3803/2025 | K | 1861 | R | 135 | 20250305 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | K | 1861 | H | 10 | 20230217 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | K | 1861 | del | 26 | 20240115 |
| EPI_ISL_12145175 | NSP3 | hCoV-19/Turkey/HSGM-3GS1331/2022 | K | 1861 | stop | 2 | 20220312 |
| EPI_ISL_8812978 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-103121-1226/2021 | K | 1861 | Q | 4 | 20211031 |
| EPI_ISL_13995952 | NSP3 | hCoV-19/env/USA/CA-SEARCH-90593/2022 | K | 1861 | E | 3 | 20220502 |
| EPI_ISL_11415707 | NSP3 | hCoV-19/Brazil/MS-REDE-L1BC73LAMS/2022 | K | 1861 | T | 2 | 20220131 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | K | 1861 | C | 1 | 20220209 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | K | 1861 | L | 2 | 20230217 |
| EPI_ISL_17885431 | NSP3 | hCoV-19/Brazil/MS-REDE-62/2022 | K | 1861 | N | 3 | 20220128 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | K | 1861 | V | 4 | 20230117 |
| EPI_ISL_11355408 | NSP3 | hCoV-19/France/GES-ChNa-210059743501/2021 | K | 1861 | P | 1 | 20210716 |
| EPI_ISL_999357 | NSP3 | hCoV-19/England/OXON-F5F531/2021 | K | 1861 | A | 1 | 20210104 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1861 | Y | 1 | 20201214 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1861 | S | 7 | 20220210 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | K | 1861 | I | 2 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1862 | W | 1 | 20220210 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | V | 1862 | K | 4 | 20230117 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | V | 1862 | del | 25 | 20240115 |
| EPI_ISL_3421844 | NSP3 | hCoV-19/England/OXON-FA8B19/2020 | V | 1862 | T | 1 | 20201222 |
| EPI_ISL_17275333 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45858/2023 | V | 1862 | F | 44 | 20230217 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | V | 1862 | N | 1 | 20211006 |
| EPI_ISL_12934349 | NSP3 | hCoV-19/USA/OR-TRACE-LINC-011722-1569/2022 | V | 1862 | insstopQS | 1 | 20220117 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | V | 1862 | insstop | 2 | 20211231 |
| EPI_ISL_9199737 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-72223/2021 | V | 1862 | stop | 5 | 20211222 |
| EPI_ISL_14436325 | NSP3 | hCoV-19/USA/TX-HMH-110865/2022 | V | 1862 | D | 2 | 20220803 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | V | 1862 | insstopQSstop | 3 | 20220210 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | V | 1862 | H | 2 | 20230217 |
| EPI_ISL_18981446 | NSP3 | hCoV-19/USA/TX-HMH-M-139734/2024 | V | 1862 | L | 131 | 20240216 |
| EPI_ISL_19799413 | NSP3 | hCoV-19/USA/TX-HMH-M-147598/2025 | V | 1862 | I | 1594 | 20250222 |
| EPI_ISL_12658798 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-123121-1286/2021 | V | 1862 | S | 3 | 20211231 |
| EPI_ISL_19287474 | NSP3 | hCoV-19/Spain/MC-HCUVA-39557193/2024 | V | 1862 | A | 12 | 20240628 |
| EPI_ISL_17275299 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45824/2023 | E | 1863 | Q | 8 | 20230217 |
| EPI_ISL_19425684 | NSP3 | hCoV-19/USA/TX-HMH-M-145802/2024 | E | 1863 | A | 21 | 20240831 |
| EPI_ISL_18981446 | NSP3 | hCoV-19/USA/TX-HMH-M-139734/2024 | E | 1863 | K | 129 | 20240216 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | E | 1863 | T | 4 | 20230217 |
| EPI_ISL_19639676 | NSP3 | hCoV-19/USA/NY-CDC-LC1126245/2024 | E | 1863 | G | 121 | 20241206 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | E | 1863 | Y | 1 | 20211006 |
| EPI_ISL_4526207 | NSP3 | hCoV-19/England/ALDP-1EF2C0C/2021 | E | 1863 | L | 1 | 20210919 |
| EPI_ISL_19568139 | NSP3 | hCoV-19/France/ARA-RELAB-HCL724000606801/2024 | E | 1863 | D | 134 | 20241108 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | E | 1863 | I | 3 | 20230217 |
| EPI_ISL_12848595 | NSP3 | hCoV-19/Australia/VIC55355/2022 | E | 1863 | V | 4 | 20220427 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | E | 1863 | insK | 1 | 20220104 |
| EPI_ISL_15107435 | NSP3 | hCoV-19/Germany/BE-ChVir-LB-220909-8636/2022 | E | 1863 | Z | 7 | 20220831 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | E | 1863 | N | 1 | 20201214 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | E | 1863 | del | 23 | 20240115 |
| EPI_ISL_13618765 | NSP3 | hCoV-19/France/GES-HMN-22062090570/2022 | E | 1863 | stop | 6 | 20220321 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | N | 1864 | A | 1 | 20210526 |
| EPI_ISL_19410544 | NSP3 | hCoV-19/Luxembourg/LNS0383659/2024 | N | 1864 | K | 277 | 20240730 |
| EPI_ISL_18981446 | NSP3 | hCoV-19/USA/TX-HMH-M-139734/2024 | N | 1864 | T | 159 | 20240216 |
| EPI_ISL_19823525 | NSP3 | hCoV-19/Croatia/HZJZ_8537/2025 | N | 1864 | Y | 17 | 20250128 |
| EPI_ISL_9793445 | NSP3 | hCoV-19/Switzerland/SZ-ETHZ-36023693/2022 | N | 1864 | D | 4 | 20220127 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | N | 1864 | del | 20 | 20240115 |
| EPI_ISL_999091 | NSP3 | hCoV-19/England/OXON-F54F5C/2021 | N | 1864 | R | 1 | 20210113 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | N | 1864 | E | 2 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1864 | V | 2 | 20210318 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | N | 1864 | F | 5 | 20230117 |
| EPI_ISL_19641280 | NSP3 | hCoV-19/USA/CA-PFZ02483/2024 | N | 1864 | S | 238 | 20240930 |
| EPI_ISL_19624357 | NSP3 | hCoV-19/Spain/AS-HUCA-232492779/2024 | N | 1864 | B | 5 | 20241214 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | N | 1864 | Q | 3 | 20220105 |
| EPI_ISL_17488394 | NSP3 | hCoV-19/Zhejiang/ZJCDC-116/2023 | N | 1864 | I | 1 | 20230202 |
| EPI_ISL_18496585 | NSP3 | hCoV-19/Spain/PV-HUB-56063592/2023 | N | 1864 | H | 173 | 20231008 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | M | 1865 | S | 3 | 20220105 |
| EPI_ISL_3743162 | NSP3 | hCoV-19/USA/ID-IBL-745650/2021 | M | 1865 | A | 1 | 20210803 |
| EPI_ISL_18264145 | NSP3 | hCoV-19/USA/TX-HMH-M-133182/2023 | M | 1865 | T | 5 | 20230905 |
| EPI_ISL_17061649 | NSP3 | hCoV-19/USA/TX-UTEP-B002475177/2022 | M | 1865 | K | 2 | 20220506 |
| EPI_ISL_18758509 | NSP3 | hCoV-19/USA/CA-MCPHL-G2400032/2024 | M | 1865 | L | 26 | 20240105 |
| EPI_ISL_19795889 | NSP3 | hCoV-19/Australia/WA16844/2025 | M | 1865 | V | 6 | 20250305 |
| EPI_ISL_18981446 | NSP3 | hCoV-19/USA/TX-HMH-M-139734/2024 | M | 1865 | stop | 108 | 20240216 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | M | 1865 | del | 23 | 20240115 |
| EPI_ISL_14771855 | NSP3 | hCoV-19/USA/TX-PHH-22V-088G0875/2022 | M | 1865 | D | 19 | 20220329 |
| EPI_ISL_3922920 | NSP3 | hCoV-19/USA/ID-IBL-749558/2021 | M | 1865 | insD | 1 | 20210816 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | M | 1865 | Y | 2 | 20230217 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | M | 1865 | insstopKH | 3 | 20220105 |
| EPI_ISL_19683250 | NSP3 | hCoV-19/Canada/AB-ABPHL-129936/2024 | M | 1865 | I | 363 | 20241210 |
| EPI_ISL_15955415 | NSP3 | hCoV-19/Malaysia/IMR_LF00932/2022 | M | 1865 | R | 3 | 20221115 |
| EPI_ISL_3236711 | NSP3 | hCoV-19/USA/WA-CDC-UW21072117114/2021 | T | 1866 | Q | 3 | 20210721 |
| EPI_ISL_9476302 | NSP3 | hCoV-19/Brazil/SP-IB_149716/2022 | T | 1866 | insNTYNLCstopstopPHGTR | 1 | 20220113 |
| EPI_ISL_15293840 | NSP3 | hCoV-19/India/MH-NCCS-2748700729224/2021 | T | 1866 | N | 3 | 20211230 |
| EPI_ISL_19783524 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YF4XE/2025 | T | 1866 | I | 3239 | 20250303 |
| EPI_ISL_17589209 | NSP3 | hCoV-19/USA/SC-CDC-QDX49175485/2023 | T | 1866 | S | 15 | 20230414 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | T | 1866 | stop | 1 | 20230217 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | T | 1866 | del | 22 | 20240115 |
| EPI_ISL_16480614 | NSP3 | hCoV-19/Japan/TKYkbm69379/2022 | T | 1866 | P | 22 | 20221208 |
| EPI_ISL_18264145 | NSP3 | hCoV-19/USA/TX-HMH-M-133182/2023 | T | 1866 | H | 103 | 20230905 |
| EPI_ISL_12934138 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1497/2022 | T | 1866 | D | 3 | 20220105 |
| EPI_ISL_4572050 | NSP3 | hCoV-19/Italy/LAZ-UCBM-722/2021 | T | 1866 | R | 2 | 20210923 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1866 | Y | 1 | 20201214 |
| EPI_ISL_19416015 | NSP3 | hCoV-19/USA/NY-PRL-240910_83A03/2024 | T | 1866 | K | 15 | 20240901 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | T | 1866 | M | 1 | 20211006 |
| EPI_ISL_19750140 | NSP3 | hCoV-19/Canada/AB-ABPHL-131171/2025 | T | 1866 | A | 1236 | 20250204 |
| EPI_ISL_999091 | NSP3 | hCoV-19/England/OXON-F54F5C/2021 | T | 1866 | C | 1 | 20210113 |
| EPI_ISL_19821889 | NSP3 | hCoV-19/USA/IL-CDC-LC1136386/2025 | P | 1867 | S | 3008 | 20250326 |
| EPI_ISL_14718231 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19507/2022 | P | 1867 | I | 2 | 20220802 |
| EPI_ISL_18398004 | NSP3 | hCoV-19/Italy/VEN-IZSVe-23RS8200-9_VI/2023 | P | 1867 | A | 14 | 20230913 |
| EPI_ISL_19824199 | NSP3 | hCoV-19/USA/IL-RIPHL_15505_G/2025 | P | 1867 | T | 12963 | 20250326 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1867 | Q | 1 | 20210318 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | P | 1867 | stop | 4 | 20230217 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | P | 1867 | D | 1 | 20230217 |
| EPI_ISL_19425450 | NSP3 | hCoV-19/USA/TX-HMH-M-145542/2024 | P | 1867 | L | 24 | 20240821 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | P | 1867 | F | 1 | 20201214 |
| EPI_ISL_951086 | NSP3 | hCoV-19/England/OXON-F49F87/2021 | P | 1867 | N | 1 | 20210104 |
| EPI_ISL_19032949 | NSP3 | hCoV-19/India/MH_BJCOG_INSACOG_6354/2024 | P | 1867 | H | 6 | 20240120 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | P | 1867 | del | 33 | 20240115 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | P | 1867 | G | 1 | 20220210 |
| EPI_ISL_15430031 | NSP3 | hCoV-19/India/OR-ILSGS19715/2022 | P | 1867 | R | 5 | 20220923 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | P | 1867 | Y | 1 | 20211006 |
| EPI_ISL_3079030 | NSP3 | hCoV-19/England/OXON-FA2915/2021 | P | 1867 | K | 2 | 20210706 |
| EPI_ISL_19388059 | NSP3 | hCoV-19/Scotland/WSI-326CC8CD/2023 | R | 1868 | P | 1012 | 20230207 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | R | 1868 | I | 1 | 20210318 |
| EPI_ISL_14718231 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19507/2022 | R | 1868 | S | 6 | 20220802 |
| EPI_ISL_19818368 | NSP3 | hCoV-19/France/HDF-RELAB-IPP03654/2025 | R | 1868 | H | 1108 | 20250308 |
| EPI_ISL_16034596 | NSP3 | hCoV-19/Vietnam/HCM-V49/2021 | R | 1868 | insRV | 1 | 20210722 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | R | 1868 | F | 1 | 20230217 |
| EPI_ISL_12292866 | NSP3 | hCoV-19/USA/FL-BPHL-5912/2022 | R | 1868 | C | 3 | 20220125 |
| EPI_ISL_19368950 | NSP3 | hCoV-19/South Korea/KDCA294607/2024 | R | 1868 | L | 326 | 20240806 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | R | 1868 | K | 6 | 20230217 |
| EPI_ISL_18264145 | NSP3 | hCoV-19/USA/TX-HMH-M-133182/2023 | R | 1868 | V | 70 | 20230905 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | R | 1868 | E | 1 | 20210805 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | R | 1868 | del | 35 | 20240115 |
| EPI_ISL_8719190 | NSP3 | hCoV-19/USA/WI-CDC-ASC210571542/2021 | R | 1868 | G | 3 | 20211226 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | R | 1868 | N | 3 | 20211006 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 1868 | A | 1 | 20220210 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | R | 1868 | stop | 12 | 20220210 |
| EPI_ISL_18264145 | NSP3 | hCoV-19/USA/TX-HMH-M-133182/2023 | D | 1869 | T | 75 | 20230905 |
| EPI_ISL_1023805 | NSP3 | hCoV-19/Brazil/RJ-9054PL01/2020 | D | 1869 | G | 3 | 20200810 |
| EPI_ISL_19156429 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00020844_01/2024 | D | 1869 | Y | 7 | 20240204 |
| EPI_ISL_17426658 | NSP3 | hCoV-19/England/PHEC-YYET8DE/2023 | D | 1869 | H | 5 | 20230327 |
| EPI_ISL_17002253 | NSP3 | hCoV-19/Austria/Medilab_1698/2023 | D | 1869 | E | 4 | 20230218 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | D | 1869 | R | 1 | 20210806 |
| EPI_ISL_19388059 | NSP3 | hCoV-19/Scotland/WSI-326CC8CD/2023 | D | 1869 | P | 10 | 20230207 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | D | 1869 | del | 36 | 20240115 |
| EPI_ISL_7493998 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-081421-992/2021 | D | 1869 | C | 1 | 20210814 |
| EPI_ISL_7997604 | NSP3 | hCoV-19/USA/TX-BSWTemple-ILL-R29-0073/2021 | D | 1869 | N | 2 | 20211208 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | D | 1869 | A | 2 | 20230217 |
| EPI_ISL_2157984 | NSP3 | hCoV-19/Turkey/HSGM-11578/2021 | D | 1869 | insLGA | 1 | 20210311 |
| EPI_ISL_3079030 | NSP3 | hCoV-19/England/OXON-FA2915/2021 | D | 1869 | K | 1 | 20210706 |
| EPI_ISL_10646428 | NSP3 | hCoV-19/South Africa/NICD-N34295/2022 | D | 1869 | V | 1 | 20220130 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | D | 1869 | I | 1 | 20210526 |
| EPI_ISL_1751831 | NSP3 | hCoV-19/Germany/BY-MVP-000002295/2021 | D | 1869 | B | 2 | 20210104 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | D | 1869 | S | 3 | 20230217 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | D | 1869 | L | 5 | 20230217 |
| EPI_ISL_19803481 | NSP3 | hCoV-19/USA/WI-WSLH-2500987/2025 | L | 1870 | F | 3175 | 20250309 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1870 | S | 2 | 20220210 |
| EPI_ISL_19813447 | NSP3 | hCoV-19/France/ARA-HCL125011829901/2025 | L | 1870 | V | 18 | 20250325 |
| EPI_ISL_14718231 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19507/2022 | L | 1870 | C | 2 | 20220802 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | L | 1870 | P | 2 | 20230217 |
| EPI_ISL_19580959 | NSP3 | hCoV-19/Japan/NCGM-03849/2022 | L | 1870 | H | 4 | 20220518 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | L | 1870 | W | 6 | 20220210 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | L | 1870 | R | 56 | 20230217 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | L | 1870 | Q | 1 | 20210815 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | L | 1870 | del | 38 | 20240115 |
| EPI_ISL_15618615 | NSP3 | hCoV-19/USA/NY-CDC-LC0917445/2022 | L | 1870 | J | 33 | 20221014 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | L | 1870 | Y | 1 | 20230217 |
| EPI_ISL_19536373 | NSP3 | hCoV-19/USA/NY-SUNYQB-5884061/2024 | L | 1870 | I | 502 | 20241007 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | L | 1870 | T | 3 | 20230217 |
| EPI_ISL_999091 | NSP3 | hCoV-19/England/OXON-F54F5C/2021 | L | 1870 | M | 1 | 20210113 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | G | 1871 | P | 1 | 20210726 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | G | 1871 | insL | 1 | 20210805 |
| EPI_ISL_17275351 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45877/2023 | G | 1871 | S | 6 | 20230217 |
| EPI_ISL_1249193 | NSP3 | hCoV-19/England/OXON-F70233/2021 | G | 1871 | Q | 1 | 20210221 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | G | 1871 | W | 2 | 20230217 |
| EPI_ISL_18998531 | NSP3 | hCoV-19/Norway/735/2023 | G | 1871 | C | 5 | 20230104 |
| EPI_ISL_1023805 | NSP3 | hCoV-19/Brazil/RJ-9054PL01/2020 | G | 1871 | N | 3 | 20200810 |
| EPI_ISL_13993336 | NSP3 | hCoV-19/USA/TX-HMH-M-106566/2022 | G | 1871 | D | 2 | 20220712 |
| EPI_ISL_3922822 | NSP3 | hCoV-19/USA/ID-IBL-638515/2020 | G | 1871 | insV | 1 | 20200801 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | G | 1871 | V | 69 | 20230401 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | G | 1871 | A | 5 | 20230217 |
| EPI_ISL_3495076 | NSP3 | hCoV-19/Germany/HH-RKI-I-195566/2021 | G | 1871 | T | 2 | 20210724 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1871 | I | 2 | 20220210 |
| EPI_ISL_12658806 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-121521-1271/2021 | G | 1871 | insLYstopLstopC | 1 | 20211215 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | G | 1871 | del | 58 | 20240115 |
| EPI_ISL_4117805 | NSP3 | hCoV-19/Thailand/Samut Prakan_SEQ7311/2021 | G | 1871 | R | 2 | 20210824 |
| EPI_ISL_3495076 | NSP3 | hCoV-19/Germany/HH-RKI-I-195566/2021 | A | 1872 | P | 2 | 20210724 |
| EPI_ISL_14680716 | NSP3 | hCoV-19/India/KA-INSACOG-CBR-1402HAV070/2022 | A | 1872 | insEIKVDKT | 4 | 20220204 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1872 | T | 2 | 20220210 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | A | 1872 | insXstopLstop | 1 | 20220104 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | A | 1872 | R | 1 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 1872 | Q | 1 | 20210318 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | A | 1872 | L | 57 | 20230401 |
| EPI_ISL_999091 | NSP3 | hCoV-19/England/OXON-F54F5C/2021 | A | 1872 | Y | 1 | 20210113 |
| EPI_ISL_18746765 | NSP3 | hCoV-19/env/Ukraine/80601/2023 | A | 1872 | S | 7 | 20230928 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | A | 1872 | del | 42 | 20240115 |
| EPI_ISL_19828152 | NSP3 | hCoV-19/Australia/QLD0x0154F0/2025 | A | 1872 | V | 5477 | 20250331 |
| EPI_ISL_1249193 | NSP3 | hCoV-19/England/OXON-F70233/2021 | A | 1872 | H | 1 | 20210221 |
| EPI_ISL_18816401 | NSP3 | hCoV-19/USA/TX-HMH-M-137726/2024 | A | 1872 | D | 7 | 20240111 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | A | 1872 | I | 4 | 20230217 |
| EPI_ISL_16814843 | NSP3 | hCoV-19/Spain/AS-232303428/2023 | C | 1873 | F | 3 | 20230124 |
| EPI_ISL_18264145 | NSP3 | hCoV-19/USA/TX-HMH-M-133182/2023 | C | 1873 | L | 17 | 20230905 |
| EPI_ISL_16215319 | NSP3 | hCoV-19/Canary Islands/CN-HUGCDN-02394152-07/2021 | C | 1873 | T | 1 | 20210726 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | C | 1873 | N | 1 | 20210318 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1873 | E | 1 | 20220210 |
| EPI_ISL_18161020 | NSP3 | hCoV-19/Xinjiang/XJCDCCJ-192/2023 | C | 1873 | S | 32 | 20230729 |
| EPI_ISL_1928466 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSAGOG-GSEQ-2343/2021 | C | 1873 | H | 1 | 20210329 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | C | 1873 | insXYstop | 1 | 20220110 |
| EPI_ISL_19564765 | NSP3 | hCoV-19/Gansu/GSCDC-1263/2024 | C | 1873 | G | 9 | 20240918 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | C | 1873 | stop | 3 | 20230217 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | C | 1873 | del | 37 | 20240115 |
| EPI_ISL_17372599 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2616/2023 | C | 1873 | I | 1 | 20230113 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | C | 1873 | V | 65 | 20230401 |
| EPI_ISL_9787279 | NSP3 | hCoV-19/USA/KS-KSU-0361/2022 | C | 1873 | Y | 3 | 20220106 |
| EPI_ISL_12740219 | NSP3 | hCoV-19/USA/KS-KSU-2055/2022 | C | 1873 | R | 5 | 20220208 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | C | 1873 | P | 1 | 20230217 |
| EPI_ISL_10943874 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8940/2022 | I | 1874 | Y | 2 | 20220209 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1874 | D | 1 | 20210318 |
| EPI_ISL_3078868 | NSP3 | hCoV-19/England/OXON-FA1460/2021 | I | 1874 | insIT | 1 | 20210709 |
| EPI_ISL_10969482 | NSP3 | hCoV-19/Lebanon/NIC92/2022 | I | 1874 | A | 2 | 20220104 |
| EPI_ISL_7312826 | NSP3 | hCoV-19/France/GES-HMN-21122010362/2021 | I | 1874 | K | 3 | 20211117 |
| EPI_ISL_9046655 | NSP3 | hCoV-19/USA/NJ-CDC-ASC210565499/2022 | I | 1874 | C | 3 | 20220102 |
| EPI_ISL_8803734 | NSP3 | hCoV-19/India/MH-NCCS-2750000379069/2021 | I | 1874 | insY | 1 | 20210807 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | I | 1874 | L | 95 | 20230412 |
| EPI_ISL_14366990 | NSP3 | hCoV-19/India/MH-NCCS-526704/2022 | I | 1874 | insGR | 103 | 20220109 |
| EPI_ISL_708023 | NSP3 | hCoV-19/Germany/SL-SU-OM003/2020 | I | 1874 | insXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | 8 | 20200619 |
| EPI_ISL_11323696 | NSP3 | hCoV-19/India/MH-MCGM-ICMR-INSACOG-WG2974/2022 | I | 1874 | N | 2 | 20220207 |
| EPI_ISL_6475223 | NSP3 | hCoV-19/Italy/ABR-IZSGC-313850/2021 | I | 1874 | J | 7 | 20211029 |
| EPI_ISL_17372599 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2616/2023 | I | 1874 | stop | 1 | 20230113 |
| EPI_ISL_8806441 | NSP3 | hCoV-19/India/GA-NCCS-212250197/2021 | I | 1874 | insG | 2 | 20210813 |
| EPI_ISL_18516036 | NSP3 | hCoV-19/Brazil/SP-FIOCRUZ-11697/2023 | I | 1874 | M | 15 | 20231006 |
| EPI_ISL_6268468 | NSP3 | hCoV-19/Singapore/7822/2021 | I | 1874 | T | 3 | 20211109 |
| EPI_ISL_5440259 | NSP3 | hCoV-19/Nigeria/NCDC-NR584/2021 | I | 1874 | insRS | 1 | 20210901 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | I | 1874 | del | 41 | 20240115 |
| EPI_ISL_16717305 | NSP3 | hCoV-19/Australia/WA11014/2023 | I | 1874 | F | 5 | 20230113 |
| EPI_ISL_12658788 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110421-1333/2021 | I | 1874 | insF | 1 | 20211104 |
| EPI_ISL_18927617 | NSP3 | hCoV-19/USA/TX-HMH-M-139406/2024 | I | 1874 | V | 24 | 20240209 |
| EPI_ISL_17488742 | NSP3 | hCoV-19/Tianjin/TJCDC-258-020/2023 | I | 1874 | S | 6 | 20230325 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | D | 1875 | P | 1 | 20220302 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | D | 1875 | insstop | 1 | 20211102 |
| EPI_ISL_17211184 | NSP3 | hCoV-19/env/France/NAQ-CHUL-57-43/2023 | D | 1875 | N | 73 | 20230207 |
| EPI_ISL_3495076 | NSP3 | hCoV-19/Germany/HH-RKI-I-195566/2021 | D | 1875 | K | 5 | 20210724 |
| EPI_ISL_16339146 | NSP3 | hCoV-19/South Korea/KDCA179750/2022 | D | 1875 | A | 59 | 20221202 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | D | 1875 | V | 28 | 20230412 |
| EPI_ISL_16542720 | NSP3 | hCoV-19/USA/TX-HMH-M-122691/2023 | D | 1875 | E | 132 | 20230107 |
| EPI_ISL_18264145 | NSP3 | hCoV-19/USA/TX-HMH-M-133182/2023 | D | 1875 | L | 12 | 20230905 |
| EPI_ISL_17417889 | NSP3 | hCoV-19/Thailand/NIC_PNB_1021/2023 | D | 1875 | B | 11 | 20230127 |
| EPI_ISL_18856969 | NSP3 | hCoV-19/USA/IL-RIPHL_21657_G/2023 | D | 1875 | S | 6 | 20231230 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | D | 1875 | I | 4 | 20230217 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | D | 1875 | stop | 6 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | D | 1875 | F | 2 | 20220210 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | D | 1875 | T | 46 | 20230401 |
| EPI_ISL_3756621 | NSP3 | hCoV-19/USA/ID-IBL-744725/2021 | D | 1875 | insF | 1 | 20210802 |
| EPI_ISL_8803734 | NSP3 | hCoV-19/India/MH-NCCS-2750000379069/2021 | D | 1875 | C | 2 | 20210807 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | D | 1875 | insstopLstop | 4 | 20220210 |
| EPI_ISL_18983273 | NSP3 | hCoV-19/env/Ukraine/84763/2024 | D | 1875 | G | 26 | 20240104 |
| EPI_ISL_17488394 | NSP3 | hCoV-19/Zhejiang/ZJCDC-116/2023 | D | 1875 | Y | 66 | 20230202 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | D | 1875 | del | 44 | 20240115 |
| EPI_ISL_10851657 | NSP3 | hCoV-19/Pakistan/AKU-JAN-RUN2-04/2022 | D | 1875 | R | 4 | 20220108 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | D | 1875 | H | 8 | 20230217 |
| EPI_ISL_19348696 | NSP3 | hCoV-19/Morocco/22/2020 | C | 1876 | M | 1 | 20201101 |
| EPI_ISL_3756849 | NSP3 | hCoV-19/USA/ID-IBL-746928/2021 | C | 1876 | insstop | 2 | 20210806 |
| EPI_ISL_17949487 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-47865/2023 | C | 1876 | S | 40 | 20230603 |
| EPI_ISL_9911836 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344162/2022 | C | 1876 | E | 3 | 20220206 |
| EPI_ISL_5324100 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324675_CAM_IZSM_COLLI_TIGEM/2021 | C | 1876 | Y | 3 | 20210916 |
| EPI_ISL_10189672 | NSP3 | hCoV-19/USA/TN-ASC-210603047/2022 | C | 1876 | insS | 1 | 20220119 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | C | 1876 | V | 84 | 20230401 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | C | 1876 | K | 2 | 20230412 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1876 | H | 1 | 20220210 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | C | 1876 | L | 4 | 20211102 |
| EPI_ISL_14718231 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19507/2022 | C | 1876 | W | 2 | 20220802 |
| EPI_ISL_17236581 | NSP3 | hCoV-19/Pakistan/124685/2022 | C | 1876 | I | 2 | 20220302 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | C | 1876 | del | 41 | 20240115 |
| EPI_ISL_16566358 | NSP3 | hCoV-19/Brazil/BA-LACEN-3467-292784508/2022 | C | 1876 | F | 8 | 20221227 |
| EPI_ISL_15293828 | NSP3 | hCoV-19/India/MH-NCCS-2512210324/2021 | C | 1876 | insR | 2 | 20211226 |
| EPI_ISL_16830352 | NSP3 | hCoV-19/Sweden/6454217076/2023 | C | 1876 | G | 12 | 20230122 |
| EPI_ISL_18264145 | NSP3 | hCoV-19/USA/TX-HMH-M-133182/2023 | C | 1876 | T | 11 | 20230905 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | C | 1876 | Q | 1 | 20221229 |
| EPI_ISL_18461990 | NSP3 | hCoV-19/Taiwan/NCKUH-061023002343/2023 | C | 1876 | R | 17 | 20230916 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | C | 1876 | stop | 11 | 20230217 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | S | 1877 | T | 18 | 20230412 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | S | 1877 | stop | 2 | 20210806 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | S | 1877 | A | 109 | 20220210 |
| EPI_ISL_19820068 | NSP3 | hCoV-19/Canada/ON-PHL-202505020/2025 | S | 1877 | G | 697 | 20250324 |
| EPI_ISL_19186376 | NSP3 | hCoV-19/Finland/THL-03075/2024 | S | 1877 | R | 74 | 20240513 |
| EPI_ISL_999091 | NSP3 | hCoV-19/England/OXON-F54F5C/2021 | S | 1877 | Q | 1 | 20210113 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | S | 1877 | del | 86 | 20240115 |
| EPI_ISL_19453092 | NSP3 | hCoV-19/USA/CO-CDPHE-42269455/2024 | S | 1877 | C | 47 | 20240816 |
| EPI_ISL_3078868 | NSP3 | hCoV-19/England/OXON-FA1460/2021 | S | 1877 | insP | 1 | 20210709 |
| EPI_ISL_19164447 | NSP3 | hCoV-19/Taiwan/CDC-F92741/2024 | S | 1877 | I | 117 | 20240522 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | S | 1877 | M | 2 | 20230217 |
| EPI_ISL_477231 | NSP3 | hCoV-19/India/KA-InStem-NCBS-0030/2020 | S | 1877 | H | 1 | 20200615 |
| EPI_ISL_18936205 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00050/2023 | S | 1877 | L | 2 | 20230411 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | S | 1877 | E | 7 | 20220210 |
| EPI_ISL_12658794 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-110221-1325/2021 | S | 1877 | Y | 1 | 20211102 |
| EPI_ISL_18264145 | NSP3 | hCoV-19/USA/TX-HMH-M-133182/2023 | S | 1877 | V | 14 | 20230905 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | S | 1877 | K | 2 | 20220222 |
| EPI_ISL_19468929 | NSP3 | hCoV-19/France/ARA-HCL024150071301/2024 | S | 1877 | N | 10953 | 20240926 |
| EPI_ISL_15486347 | NSP3 | hCoV-19/Israel/ICH-741189828/2022 | A | 1878 | P | 1 | 20221018 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | A | 1878 | Y | 1 | 20230217 |
| EPI_ISL_19808706 | NSP3 | hCoV-19/Canada/ON-SHL-202501225/2025 | A | 1878 | S | 188 | 20250315 |
| EPI_ISL_10189701 | NSP3 | hCoV-19/USA/TN-ASC-210603081/2022 | A | 1878 | G | 4 | 20220119 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1878 | E | 2 | 20220210 |
| EPI_ISL_18936205 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00050/2023 | A | 1878 | N | 2 | 20230411 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | A | 1878 | D | 3 | 20211006 |
| EPI_ISL_11355408 | NSP3 | hCoV-19/France/GES-ChNa-210059743501/2021 | A | 1878 | L | 2 | 20210716 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 1878 | T | 13 | 20221229 |
| EPI_ISL_3078868 | NSP3 | hCoV-19/England/OXON-FA1460/2021 | A | 1878 | I | 1 | 20210709 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | A | 1878 | R | 7 | 20230401 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | A | 1878 | stop | 1 | 20210428 |
| EPI_ISL_19823485 | NSP3 | hCoV-19/Italy/LAZ-IFO-2504013021/2025 | A | 1878 | V | 1380 | 20250304 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | A | 1878 | C | 9 | 20230217 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | A | 1878 | del | 35 | 20240115 |
| EPI_ISL_10851657 | NSP3 | hCoV-19/Pakistan/AKU-JAN-RUN2-04/2022 | R | 1879 | D | 1 | 20220108 |
| EPI_ISL_17275344 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45870/2023 | R | 1879 | K | 3 | 20230217 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | R | 1879 | V | 9 | 20230401 |
| EPI_ISL_17275329 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45854/2023 | R | 1879 | H | 3 | 20230217 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | R | 1879 | Q | 3 | 20230217 |
| EPI_ISL_10189672 | NSP3 | hCoV-19/USA/TN-ASC-210603047/2022 | R | 1879 | I | 1 | 20220119 |
| EPI_ISL_17466166 | NSP3 | hCoV-19/India/CT-AIIMSR-VRDL-INSACOG-1165/2023 | R | 1879 | L | 316 | 20230404 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 1879 | P | 1 | 20220210 |
| EPI_ISL_11927907 | NSP3 | hCoV-19/England/DHSC-CYBH3JX/2022 | R | 1879 | S | 29 | 20220213 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | R | 1879 | A | 4 | 20230217 |
| EPI_ISL_17881228 | NSP3 | hCoV-19/Austria/AGES-1140347/2023 | R | 1879 | G | 951 | 20230621 |
| EPI_ISL_19795806 | NSP3 | hCoV-19/USA/WI-UW-17040/2025 | R | 1879 | C | 31 | 20250129 |
| EPI_ISL_18936205 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00050/2023 | R | 1879 | N | 1 | 20230411 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | R | 1879 | del | 38 | 20240115 |
| EPI_ISL_14718231 | NSP3 | hCoV-19/Indonesia/JT-NIHRD-WGS-22-19507/2022 | R | 1879 | F | 1 | 20220802 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | R | 1879 | T | 5 | 20230412 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | R | 1879 | stop | 3 | 20220804 |
| EPI_ISL_15293901 | NSP3 | hCoV-19/India/MH-NCCS-319936189/2021 | R | 1879 | Y | 1 | 20211226 |
| EPI_ISL_19829630 | NSP3 | hCoV-19/USA/VA-CAV_S3N_00022830_01/2025 | H | 1880 | Y | 2219 | 20250314 |
| EPI_ISL_17275305 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45830/2023 | H | 1880 | K | 3 | 20230217 |
| EPI_ISL_19692502 | NSP3 | hCoV-19/USA/AZ-ASPHL-50052/2024 | H | 1880 | R | 1086 | 20241220 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | H | 1880 | del | 36 | 20240115 |
| EPI_ISL_950872 | NSP3 | hCoV-19/England/OXON-F45F4F/2020 | H | 1880 | insC | 1 | 20201228 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | H | 1880 | A | 2 | 20221229 |
| EPI_ISL_15577186 | NSP3 | hCoV-19/England/LSPA-325C9C5C/2022 | H | 1880 | L | 14 | 20221020 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | H | 1880 | P | 3 | 20230217 |
| EPI_ISL_19457058 | NSP3 | hCoV-19/Netherlands/UT-RIVM-142175/2024 | H | 1880 | Q | 35 | 20240918 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | H | 1880 | T | 2 | 20220210 |
| EPI_ISL_15293901 | NSP3 | hCoV-19/India/MH-NCCS-319936189/2021 | H | 1880 | stop | 1 | 20211226 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | H | 1880 | C | 1 | 20210428 |
| EPI_ISL_10851657 | NSP3 | hCoV-19/Pakistan/AKU-JAN-RUN2-04/2022 | H | 1880 | S | 4 | 20220108 |
| EPI_ISL_19770381 | NSP3 | hCoV-19/Spain/AS-HUCA-232514718/2025 | H | 1880 | N | 4 | 20250219 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | H | 1880 | I | 8 | 20230401 |
| EPI_ISL_19757899 | NSP3 | hCoV-19/Spain/CT-LabRefCat-079590404174/2025 | H | 1880 | insQ | 34 | 20250212 |
| EPI_ISL_18264145 | NSP3 | hCoV-19/USA/TX-HMH-M-133182/2023 | H | 1880 | V | 44 | 20230905 |
| EPI_ISL_984295 | NSP3 | hCoV-19/Belgium/UZA-UA-2532/2021 | H | 1880 | D | 1 | 20210127 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | H | 1880 | F | 1 | 20211015 |
| EPI_ISL_10189672 | NSP3 | hCoV-19/USA/TN-ASC-210603047/2022 | I | 1881 | F | 5 | 20220119 |
| EPI_ISL_7945639 | NSP3 | hCoV-19/USA/OK-CDC-ASC210717767/2021 | I | 1881 | N | 4 | 20211126 |
| EPI_ISL_19757899 | NSP3 | hCoV-19/Spain/CT-LabRefCat-079590404174/2025 | I | 1881 | M | 35 | 20250212 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | I | 1881 | E | 2 | 20230412 |
| EPI_ISL_19420566 | NSP3 | hCoV-19/Liaoning/LNCDC-319-9/2024 | I | 1881 | V | 1208 | 20240827 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | I | 1881 | C | 3 | 20221229 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | I | 1881 | H | 1 | 20211006 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | I | 1881 | D | 1 | 20210526 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | I | 1881 | del | 31 | 20240115 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1881 | K | 2 | 20220210 |
| EPI_ISL_2603416 | NSP3 | hCoV-19/France/ARA-CHUGA-1065843103/2021 | I | 1881 | insL | 1 | 20210608 |
| EPI_ISL_12321579 | NSP3 | hCoV-19/Turkey/HSGM-GS2377/2022 | I | 1881 | A | 1 | 20220405 |
| EPI_ISL_12146168 | NSP3 | hCoV-19/Turkey/HSGM-GS1562/2022 | I | 1881 | S | 2 | 20220401 |
| EPI_ISL_10817323 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-77962/2022 | I | 1881 | T | 5 | 20220110 |
| EPI_ISL_19252861 | NSP3 | hCoV-19/England/CLIMB-CM7YJ97X/2024 | I | 1881 | stop | 36 | 20240531 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | I | 1881 | L | 25 | 20230401 |
| EPI_ISL_3299582 | NSP3 | hCoV-19/Sweden/UUH-000199832966N2/2021 | I | 1881 | R | 1 | 20210428 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | I | 1881 | Y | 6 | 20220210 |
| EPI_ISL_10951217 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-9209/2022 | I | 1881 | P | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1881 | G | 1 | 20210318 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | N | 1882 | del | 33 | 20240115 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | N | 1882 | T | 3 | 20230217 |
| EPI_ISL_12658809 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1323/2022 | N | 1882 | L | 42 | 20220105 |
| EPI_ISL_8395159 | NSP3 | hCoV-19/USA/FL-CDC-ASC210567187/2021 | N | 1882 | I | 2 | 20211221 |
| EPI_ISL_12146194 | NSP3 | hCoV-19/Turkey/HSGM-GS1515/2022 | N | 1882 | D | 3 | 20220401 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | N | 1882 | R | 1 | 20210526 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | N | 1882 | F | 1 | 20211015 |
| EPI_ISL_15293901 | NSP3 | hCoV-19/India/MH-NCCS-319936189/2021 | N | 1882 | A | 2 | 20211226 |
| EPI_ISL_17650022 | NSP3 | hCoV-19/Japan/KSH120/2022 | N | 1882 | insXXXXXXXXXXXXXXXXXXXXXXXXXX | 2 | 20221121 |
| EPI_ISL_8043254 | NSP3 | hCoV-19/Spain/RI-CIBIR-302021921-Run27/2021 | N | 1882 | B | 9 | 20211214 |
| EPI_ISL_16599452 | NSP3 | hCoV-19/USA/TX-HMH-123532/2023 | N | 1882 | Y | 4 | 20230115 |
| EPI_ISL_12737287 | NSP3 | hCoV-19/Germany/BW-RKI-I-798085/2022 | N | 1882 | H | 13 | 20220510 |
| EPI_ISL_12010843 | NSP3 | hCoV-19/India/MP-AIIMS_B-ICMR-INSACOG-WGS-413/2022 | N | 1882 | V | 5 | 20220214 |
| EPI_ISL_14866446 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-113725/2022 | N | 1882 | C | 33 | 20220826 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | N | 1882 | stop | 7 | 20230217 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | N | 1882 | M | 8 | 20230401 |
| EPI_ISL_18423598 | NSP3 | hCoV-19/USA/TX-HMH-134617/2023 | N | 1882 | S | 12 | 20231004 |
| EPI_ISL_10831667 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-83754/2022 | N | 1882 | K | 4 | 20220119 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | A | 1883 | C | 6 | 20220210 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | A | 1883 | L | 3 | 20230412 |
| EPI_ISL_19803613 | NSP3 | hCoV-19/USA/WI-WSLH-2500820/2025 | A | 1883 | V | 1443 | 20250216 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | A | 1883 | E | 11 | 20230117 |
| EPI_ISL_11355408 | NSP3 | hCoV-19/France/GES-ChNa-210059743501/2021 | A | 1883 | W | 1 | 20210716 |
| EPI_ISL_19792903 | NSP3 | hCoV-19/USA/NY-PRL-250318_83A01/2025 | A | 1883 | T | 137 | 20250303 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | A | 1883 | N | 2 | 20211015 |
| EPI_ISL_18407625 | NSP3 | hCoV-19/USA/CA-HLX-STM-7TVVXD4A2/2023 | A | 1883 | G | 15 | 20230930 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | A | 1883 | Q | 1 | 20230217 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | A | 1883 | P | 1 | 20210526 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | A | 1883 | R | 8 | 20230401 |
| EPI_ISL_12658809 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1323/2022 | A | 1883 | M | 41 | 20220105 |
| EPI_ISL_18509589 | NSP3 | hCoV-19/Spain/CL-44853/2023 | A | 1883 | S | 72 | 20231019 |
| EPI_ISL_18831499 | NSP3 | hCoV-19/Pakistan/DUHS-11/2024 | A | 1883 | del | 29 | 20240115 |
| EPI_ISL_18936205 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00050/2023 | A | 1883 | K | 1 | 20230411 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | Q | 1884 | R | 57 | 20230401 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | Q | 1884 | S | 4 | 20230412 |
| EPI_ISL_18936205 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00050/2023 | Q | 1884 | Y | 1 | 20230411 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | Q | 1884 | K | 9 | 20230217 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | Q | 1884 | T | 1 | 20210526 |
| EPI_ISL_5324100 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324675_CAM_IZSM_COLLI_TIGEM/2021 | Q | 1884 | Z | 1 | 20210916 |
| EPI_ISL_10033061 | NSP3 | hCoV-19/USA/CT-JAX-JAX-2207-01-155/2022 | Q | 1884 | L | 7 | 20220201 |
| EPI_ISL_17523118 | NSP3 | hCoV-19/USA/TX-HMH-M-127644/2023 | Q | 1884 | stop | 10 | 20230323 |
| EPI_ISL_6014040 | NSP3 | hCoV-19/South Korea/KDCA15453/2021 | Q | 1884 | E | 2 | 20211007 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | Q | 1884 | A | 6 | 20220210 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | Q | 1884 | N | 1 | 20211015 |
| EPI_ISL_16285332 | NSP3 | hCoV-19/India/OR-RMRC_B-ICMR-228893/2022 | Q | 1884 | W | 1 | 20220912 |
| EPI_ISL_14866446 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-113725/2022 | Q | 1884 | G | 37 | 20220826 |
| EPI_ISL_19819618 | NSP3 | hCoV-19/Australia/SA2511342/2025 | Q | 1884 | H | 6671 | 20250328 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | Q | 1884 | del | 27 | 20230217 |
| EPI_ISL_951259 | NSP3 | hCoV-19/England/OXON-F4FACC/2021 | Q | 1884 | M | 1 | 20210108 |
| EPI_ISL_12658809 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1323/2022 | V | 1885 | R | 41 | 20220105 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1885 | D | 1 | 20201214 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 1885 | F | 1 | 20221229 |
| EPI_ISL_14147120 | NSP3 | hCoV-19/India/PB-VRDLGMCPTA-ICMR-INSACOG-720920241/2022 | V | 1885 | E | 7 | 20220406 |
| EPI_ISL_19702378 | NSP3 | hCoV-19/Canada/ON-PHL-202502878/2025 | V | 1885 | I | 481 | 20250127 |
| EPI_ISL_18264433 | NSP3 | hCoV-19/USA/TX-HMH-M-133304/2023 | V | 1885 | stop | 11 | 20230901 |
| EPI_ISL_14866446 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-113725/2022 | V | 1885 | S | 28 | 20220826 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | V | 1885 | K | 3 | 20220222 |
| EPI_ISL_12934451 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-021722-1671/2022 | V | 1885 | G | 7 | 20220210 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | V | 1885 | del | 37 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1885 | Q | 1 | 20210318 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | V | 1885 | M | 2 | 20230412 |
| EPI_ISL_19704643 | NSP3 | hCoV-19/Ireland/D-NVRL-GIRL00089513/2024 | V | 1885 | L | 1285 | 20241209 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1885 | T | 4 | 20220210 |
| EPI_ISL_17347921 | NSP3 | hCoV-19/Puerto Rico/RCMI-6RKWQM1X/2022 | V | 1885 | A | 2 | 20221215 |
| EPI_ISL_5934820 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702644494_CAM_IZSM_COLLI_TIGEM/2021 | A | 1886 | C | 1 | 20211015 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | A | 1886 | N | 1 | 20210526 |
| EPI_ISL_18423846 | NSP3 | hCoV-19/USA/TX-HMH-134853/2023 | A | 1886 | T | 13 | 20231009 |
| EPI_ISL_17372597 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2541/2023 | A | 1886 | R | 5 | 20230117 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | A | 1886 | F | 1 | 20230412 |
| EPI_ISL_951259 | NSP3 | hCoV-19/England/OXON-F4FACC/2021 | A | 1886 | I | 2 | 20210108 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | A | 1886 | insK | 2 | 20220110 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | A | 1886 | Q | 14 | 20230401 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1886 | L | 1 | 20220210 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | A | 1886 | S | 21 | 20230217 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | A | 1886 | K | 33 | 20230217 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 1886 | P | 3 | 20221229 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | A | 1886 | del | 31 | 20221226 |
| EPI_ISL_12658809 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-010522-1323/2022 | A | 1886 | stop | 41 | 20220105 |
| EPI_ISL_18157917 | NSP3 | hCoV-19/Ecuador/GENSBIO-INSPI-27353/2023 | A | 1886 | E | 2 | 20230802 |
| EPI_ISL_18924220 | NSP3 | hCoV-19/South Korea/KDCA285354/2024 | A | 1886 | V | 4 | 20240131 |
| EPI_ISL_12626158 | NSP3 | hCoV-19/USA/OR_UO_MAP004369/2022 | K | 1887 | I | 2 | 20220412 |
| EPI_ISL_19459321 | NSP3 | hCoV-19/India/SK-ICMR-NIV-G-16235/2024 | K | 1887 | del | 38 | 20240731 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 1887 | L | 2 | 20221229 |
| EPI_ISL_18968181 | NSP3 | hCoV-19/Haiti/LNSP-93230241/2024 | K | 1887 | T | 4 | 20240101 |
| EPI_ISL_19496376 | NSP3 | hCoV-19/env/Uruguay/LEVVZ-660/2023 | K | 1887 | N | 8 | 20230619 |
| EPI_ISL_15293901 | NSP3 | hCoV-19/India/MH-NCCS-319936189/2021 | K | 1887 | S | 4 | 20211226 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | K | 1887 | stop | 2 | 20230217 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | K | 1887 | D | 2 | 20230412 |
| EPI_ISL_19467334 | NSP3 | hCoV-19/USA/TX-PHH-SPID1004208064/2024 | K | 1887 | R | 572 | 20240828 |
| EPI_ISL_3078834 | NSP3 | hCoV-19/England/OXON-FA108A/2021 | K | 1887 | C | 2 | 20210709 |
| EPI_ISL_18654903 | NSP3 | hCoV-19/USA/CO-CDPHE-41544707/2023 | K | 1887 | Q | 47 | 20231114 |
| EPI_ISL_5054148 | NSP3 | hCoV-19/Senegal/cTE BM 0259/2020 | K | 1887 | insKS | 1 | 20200626 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1887 | Y | 1 | 20220210 |
| EPI_ISL_12610873 | NSP3 | hCoV-19/Turkey/HSGM-GS2802/2022 | K | 1887 | E | 3 | 20220407 |
| EPI_ISL_19564860 | NSP3 | hCoV-19/England/CLIMB-CM7YF1QT/2024 | S | 1888 | G | 368 | 20241109 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | S | 1888 | N | 7 | 20221229 |
| EPI_ISL_950872 | NSP3 | hCoV-19/England/OXON-F45F4F/2020 | S | 1888 | F | 1 | 20201228 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | S | 1888 | del | 37 | 20230217 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | S | 1888 | stop | 3 | 20230217 |
| EPI_ISL_7891548 | NSP3 | hCoV-19/Russia/SPE-RII-6207S/2021 | S | 1888 | R | 4 | 20211217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | S | 1888 | Y | 1 | 20201214 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | S | 1888 | K | 49 | 20230412 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | S | 1888 | V | 11 | 20230401 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | S | 1888 | D | 2 | 20211222 |
| EPI_ISL_15293901 | NSP3 | hCoV-19/India/MH-NCCS-319936189/2021 | S | 1888 | Q | 5 | 20211226 |
| EPI_ISL_19662789 | NSP3 | hCoV-19/Singapore/R64MQ56/2024 | S | 1888 | I | 253 | 20241125 |
| EPI_ISL_11931897 | NSP3 | hCoV-19/England/DHSC-CYBRA3Y/2022 | S | 1888 | T | 4 | 20220203 |
| EPI_ISL_18621915 | NSP3 | hCoV-19/USA/AZ-CDC-QDX88254280/2023 | S | 1888 | C | 6 | 20231128 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | H | 1889 | S | 7 | 20230401 |
| EPI_ISL_19700427 | NSP3 | hCoV-19/Israel/ICH-741227283/2025 | H | 1889 | L | 13 | 20250120 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | H | 1889 | D | 3 | 20221226 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | H | 1889 | del | 38 | 20230217 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | H | 1889 | N | 12 | 20221229 |
| EPI_ISL_14311704 | NSP3 | hCoV-19/USA/TX-HMH-M-109197/2022 | H | 1889 | Y | 11 | 20220725 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | H | 1889 | V | 41 | 20230412 |
| EPI_ISL_8718065 | NSP3 | hCoV-19/USA/ID-IBL-781484/2021 | H | 1889 | F | 2 | 20211217 |
| EPI_ISL_5333916 | NSP3 | hCoV-19/Sweden/UUH-000200064685/2021 | H | 1889 | R | 3 | 20210610 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | H | 1889 | K | 2 | 20210526 |
| EPI_ISL_19335389 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143235/2024 | H | 1889 | Q | 87 | 20240725 |
| EPI_ISL_12319502 | NSP3 | hCoV-19/Turkey/HSGM-G8300/2022 | H | 1889 | P | 4 | 20220312 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | H | 1889 | T | 10 | 20230401 |
| EPI_ISL_922266 | NSP3 | hCoV-19/England/OXON-F51BA6/2020 | H | 1889 | I | 1 | 20201230 |
| EPI_ISL_11680629 | NSP3 | hCoV-19/USA/NM-UNM-TRL_1J2021_078/2021 | H | 1889 | insQTQT | 1 | 20211220 |
| EPI_ISL_3452734 | NSP3 | hCoV-19/Maldives/MAV15143/2021 | N | 1890 | R | 1 | 20210125 |
| EPI_ISL_8812974 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-042221-1189/2021 | N | 1890 | C | 2 | 20210422 |
| EPI_ISL_14690435 | NSP3 | hCoV-19/Finland/THL-202217122/2022 | N | 1890 | I | 3 | 20220805 |
| EPI_ISL_18743754 | NSP3 | hCoV-19/USA/TX-HMH-M-136677/2023 | N | 1890 | T | 62 | 20231220 |
| EPI_ISL_950872 | NSP3 | hCoV-19/England/OXON-F45F4F/2020 | N | 1890 | V | 1 | 20201228 |
| EPI_ISL_19335389 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143235/2024 | N | 1890 | H | 63 | 20240725 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | N | 1890 | stop | 1 | 20210806 |
| EPI_ISL_950782 | NSP3 | hCoV-19/England/OXON-F44809/2020 | N | 1890 | E | 1 | 20201221 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | N | 1890 | K | 5 | 20221229 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | N | 1890 | Q | 7 | 20230401 |
| EPI_ISL_19620165 | NSP3 | hCoV-19/Canada/ON-PHL-202423548/2024 | N | 1890 | D | 133 | 20241129 |
| EPI_ISL_16541124 | NSP3 | hCoV-19/Spain/CT-HUB07575/2022 | N | 1890 | Y | 7 | 20221219 |
| EPI_ISL_950782 | NSP3 | hCoV-19/England/OXON-F44809/2020 | N | 1890 | insNKY | 1 | 20201221 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | N | 1890 | P | 6 | 20230217 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | N | 1890 | insP | 1 | 20230217 |
| EPI_ISL_17881079 | NSP3 | hCoV-19/Austria/AGES-1140264/2023 | N | 1890 | del | 44 | 20230619 |
| EPI_ISL_15398464 | NSP3 | hCoV-19/USA/NY-CDC-LC0894383/2022 | N | 1890 | B | 6 | 20220919 |
| EPI_ISL_18010104 | NSP3 | hCoV-19/France/PAC-HCL723000854501/2023 | N | 1890 | L | 5 | 20230612 |
| EPI_ISL_19532928 | NSP3 | hCoV-19/Canada/AB-ABPHL-126271/2024 | N | 1890 | S | 281 | 20241027 |
| EPI_ISL_951259 | NSP3 | hCoV-19/England/OXON-F4FACC/2021 | N | 1890 | G | 1 | 20210108 |
| EPI_ISL_19826038 | NSP3 | hCoV-19/Singapore/Y25R15MSC122/2025 | I | 1891 | V | 1155 | 20250408 |
| EPI_ISL_14488427 | NSP3 | hCoV-19/USA/ID-IBL-842153/2022 | I | 1891 | N | 2 | 20220802 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | I | 1891 | Y | 1 | 20210526 |
| EPI_ISL_15293901 | NSP3 | hCoV-19/India/MH-NCCS-319936189/2021 | I | 1891 | F | 5 | 20211226 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1891 | A | 1 | 20220210 |
| EPI_ISL_19550449 | NSP3 | hCoV-19/Sichuan/PZHCDC-45/2024 | I | 1891 | T | 75 | 20240826 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | I | 1891 | H | 8 | 20230401 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | I | 1891 | K | 1 | 20221229 |
| EPI_ISL_2903001 | NSP3 | hCoV-19/England/OXON-F876C4/2020 | I | 1891 | S | 1 | 20201012 |
| EPI_ISL_14749041 | NSP3 | hCoV-19/India/OR-ILSGS17549/2022 | I | 1891 | C | 11 | 20220129 |
| EPI_ISL_8712160 | NSP3 | hCoV-19/Germany/BY-LGL-9ab48cd/2021 | I | 1891 | J | 2 | 20211213 |
| EPI_ISL_18402584 | NSP3 | hCoV-19/Japan/PG-576557/2023 | I | 1891 | M | 50 | 20230925 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | I | 1891 | del | 33 | 20230217 |
| EPI_ISL_18743754 | NSP3 | hCoV-19/USA/TX-HMH-M-136677/2023 | I | 1891 | L | 38 | 20231220 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | I | 1891 | W | 2 | 20230412 |
| EPI_ISL_18698059 | NSP3 | hCoV-19/Japan/RB23-008-07-P0/2023 | I | 1891 | insSC | 2 | 20230815 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | I | 1891 | E | 2 | 20210520 |
| EPI_ISL_19475177 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-1767/2024 | A | 1892 | S | 111 | 20240826 |
| EPI_ISL_19784396 | NSP3 | hCoV-19/New Zealand/25YA0654/2025 | A | 1892 | I | 154 | 20250304 |
| EPI_ISL_15293901 | NSP3 | hCoV-19/India/MH-NCCS-319936189/2021 | A | 1892 | D | 10 | 20211226 |
| EPI_ISL_19715322 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YGUBA/2025 | A | 1892 | V | 1439 | 20250108 |
| EPI_ISL_19573902 | NSP3 | hCoV-19/Germany/NW-RKI-I-1146124/2024 | A | 1892 | N | 20 | 20241030 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | A | 1892 | K | 1 | 20201214 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | A | 1892 | P | 10 | 20230217 |
| EPI_ISL_14078522 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_7356Y7DEORA334UF/2022 | A | 1892 | F | 11 | 20220714 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | A | 1892 | del | 37 | 20230217 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | A | 1892 | C | 5 | 20230401 |
| EPI_ISL_7508606 | NSP3 | hCoV-19/USA/CA-CSMC410/2020 | A | 1892 | R | 1 | 20200803 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | A | 1892 | L | 51 | 20230401 |
| EPI_ISL_14795943 | NSP3 | hCoV-19/Sweden/03_SE600_500000056205SP/2022 | A | 1892 | Y | 1 | 20220113 |
| EPI_ISL_19833200 | NSP3 | hCoV-19/Poland/Kce-46/2025 | A | 1892 | T | 2012589 | 20250411 |
| EPI_ISL_17989516 | NSP3 | hCoV-19/Spain/MC-HCUVA-39469167/2023 | A | 1892 | G | 13 | 20230615 |
| EPI_ISL_18401553 | NSP3 | hCoV-19/USA/UT-UPHL-231013802377/2023 | L | 1893 | S | 9 | 20230925 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | L | 1893 | H | 1 | 20230217 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | L | 1893 | stop | 13 | 20230401 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | L | 1893 | R | 1 | 20220203 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 1893 | C | 2 | 20221229 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | L | 1893 | M | 11 | 20230412 |
| EPI_ISL_13718869 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-2776/2022 | L | 1893 | W | 3 | 20220630 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | L | 1893 | del | 33 | 20230217 |
| EPI_ISL_14488439 | NSP3 | hCoV-19/USA/ID-IBL-843181/2022 | L | 1893 | T | 2 | 20220803 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1893 | E | 1 | 20210318 |
| EPI_ISL_18564866 | NSP3 | hCoV-19/South Korea/KDCA274334/2023 | L | 1893 | V | 6 | 20231030 |
| EPI_ISL_14749041 | NSP3 | hCoV-19/India/OR-ILSGS17549/2022 | L | 1893 | D | 9 | 20220129 |
| EPI_ISL_6407412 | NSP3 | hCoV-19/USA/MI-CDC-STM-9UQJNQY2H/2021 | L | 1893 | I | 1 | 20211021 |
| EPI_ISL_9911836 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-C-344162/2022 | L | 1893 | P | 1 | 20220206 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | L | 1893 | F | 11 | 20230401 |
| EPI_ISL_8504542 | NSP3 | hCoV-19/USA/CA-CDPH-3000034213/2021 | I | 1894 | J | 1 | 20210518 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1894 | A | 1 | 20220210 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | I | 1894 | S | 1 | 20210520 |
| EPI_ISL_19594673 | NSP3 | hCoV-19/Yunnan/YNCDC-2111/2024 | I | 1894 | T | 594 | 20240820 |
| EPI_ISL_10078881 | NSP3 | hCoV-19/USA/TN-ASC-210508770/2022 | I | 1894 | C | 40 | 20220108 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | I | 1894 | Y | 15 | 20230401 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | I | 1894 | del | 34 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1894 | E | 2 | 20210318 |
| EPI_ISL_16742315 | NSP3 | hCoV-19/USA/FL-CDC-LC0993746/2023 | I | 1894 | M | 34 | 20230117 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | I | 1894 | L | 24 | 20230412 |
| EPI_ISL_19654956 | NSP3 | hCoV-19/USA/IA-SHL-2551536/2024 | I | 1894 | V | 488 | 20241224 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | I | 1894 | D | 7 | 20230401 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | I | 1894 | stop | 3 | 20210806 |
| EPI_ISL_2903001 | NSP3 | hCoV-19/England/OXON-F876C4/2020 | I | 1894 | G | 1 | 20201012 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | I | 1894 | H | 1 | 20230217 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | I | 1894 | P | 1 | 20230217 |
| EPI_ISL_14746184 | NSP3 | hCoV-19/Philippines/PH-PGCMIN942/2022 | I | 1894 | R | 8 | 20220729 |
| EPI_ISL_8718065 | NSP3 | hCoV-19/USA/ID-IBL-781484/2021 | I | 1894 | W | 1 | 20211217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | W | 1895 | D | 1 | 20220210 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | W | 1895 | Q | 2 | 20230217 |
| EPI_ISL_11319500 | NSP3 | hCoV-19/Israel/SMC-7047968/2022 | W | 1895 | L | 7 | 20220225 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | W | 1895 | G | 16 | 20230401 |
| EPI_ISL_14749041 | NSP3 | hCoV-19/India/OR-ILSGS17549/2022 | W | 1895 | E | 8 | 20220129 |
| EPI_ISL_16069217 | NSP3 | hCoV-19/USA/CA-ASC-210988942/2022 | W | 1895 | stop | 12 | 20221111 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | W | 1895 | I | 2 | 20220203 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | W | 1895 | M | 47 | 20230401 |
| EPI_ISL_11163331 | NSP3 | hCoV-19/Puerto Rico/PR-021722-S-2575/2022 | W | 1895 | R | 4 | 20220217 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | W | 1895 | T | 1 | 20230412 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | W | 1895 | del | 36 | 20230217 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | W | 1895 | insCLYstopPV | 1 | 20230217 |
| EPI_ISL_5054148 | NSP3 | hCoV-19/Senegal/cTE BM 0259/2020 | W | 1895 | H | 1 | 20200626 |
| EPI_ISL_16085631 | NSP3 | hCoV-19/France/BFC-HMN-22112300109/2022 | W | 1895 | C | 10 | 20221121 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | W | 1895 | S | 3 | 20221229 |
| EPI_ISL_950782 | NSP3 | hCoV-19/England/OXON-F44809/2020 | W | 1895 | K | 1 | 20201221 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | W | 1895 | insG | 1 | 20210805 |
| EPI_ISL_10078881 | NSP3 | hCoV-19/USA/TN-ASC-210508770/2022 | W | 1895 | Y | 4 | 20220108 |
| EPI_ISL_14488439 | NSP3 | hCoV-19/USA/ID-IBL-843181/2022 | W | 1895 | F | 3 | 20220803 |
| EPI_ISL_3756622 | NSP3 | hCoV-19/USA/ID-IBL-744715/2021 | W | 1895 | A | 1 | 20210802 |
| EPI_ISL_5054148 | NSP3 | hCoV-19/Senegal/cTE BM 0259/2020 | N | 1896 | W | 1 | 20200626 |
| EPI_ISL_18109374 | NSP3 | hCoV-19/Australia/SA547152/2023 | N | 1896 | K | 15 | 20230628 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | N | 1896 | F | 1 | 20210520 |
| EPI_ISL_17642839 | NSP3 | hCoV-19/USA/CA-CDPH-500110743/2023 | N | 1896 | H | 56 | 20230323 |
| EPI_ISL_18643246 | NSP3 | hCoV-19/Italy/LOM-UNIBS-69542880/2023 | N | 1896 | I | 1 | 20231211 |
| EPI_ISL_17387888 | NSP3 | hCoV-19/Japan/PG-466858/2023 | N | 1896 | S | 23 | 20230318 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | N | 1896 | V | 3 | 20220209 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1896 | P | 1 | 20220210 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | N | 1896 | T | 20 | 20230412 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | N | 1896 | E | 48 | 20230401 |
| EPI_ISL_14488439 | NSP3 | hCoV-19/USA/ID-IBL-843181/2022 | N | 1896 | D | 7 | 20220803 |
| EPI_ISL_15536475 | NSP3 | hCoV-19/France/ARA-GENBIO-14292761099/2022 | N | 1896 | Y | 20 | 20221003 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | N | 1896 | stop | 1 | 20210812 |
| EPI_ISL_6949077 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-66216/2021 | N | 1896 | M | 1 | 20211009 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | N | 1896 | G | 2 | 20210815 |
| EPI_ISL_14749041 | NSP3 | hCoV-19/India/OR-ILSGS17549/2022 | N | 1896 | R | 9 | 20220129 |
| EPI_ISL_4341745 | NSP3 | hCoV-19/Singapore/5523/2021 | N | 1896 | B | 2 | 20210913 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | N | 1896 | L | 1 | 20220203 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | N | 1896 | del | 32 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1897 | S | 1 | 20220210 |
| EPI_ISL_19234592 | NSP3 | hCoV-19/Sichuan/PZHCDC-0409/2024 | V | 1897 | A | 270 | 20240327 |
| EPI_ISL_14749041 | NSP3 | hCoV-19/India/OR-ILSGS17549/2022 | V | 1897 | stop | 7 | 20220129 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | V | 1897 | T | 5 | 20221229 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | V | 1897 | R | 46 | 20230401 |
| EPI_ISL_19784578 | NSP3 | hCoV-19/Australia/QLD0x01531B/2025 | V | 1897 | I | 1542 | 20250223 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | V | 1897 | N | 1 | 20210526 |
| EPI_ISL_2464336 | NSP3 | hCoV-19/South Korea/KDCA4585/2021 | V | 1897 | C | 1 | 20210416 |
| EPI_ISL_12321589 | NSP3 | hCoV-19/Turkey/HSGM-GS2243/2022 | V | 1897 | D | 4 | 20220405 |
| EPI_ISL_19503017 | NSP3 | hCoV-19/Russia/AST-RII-MH200469S/2024 | V | 1897 | F | 476 | 20240918 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | V | 1897 | Y | 1 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | V | 1897 | E | 2 | 20210318 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | V | 1897 | del | 31 | 20230217 |
| EPI_ISL_11928017 | NSP3 | hCoV-19/England/DHSC-CYBHOBE/2021 | V | 1897 | insD | 1 | 20211024 |
| EPI_ISL_18139469 | NSP3 | hCoV-19/Egypt/CPHL-EGY23978/2022 | V | 1897 | G | 1 | 20220814 |
| EPI_ISL_14488439 | NSP3 | hCoV-19/USA/ID-IBL-843181/2022 | V | 1897 | M | 3 | 20220803 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1897 | K | 1 | 20201214 |
| EPI_ISL_3078834 | NSP3 | hCoV-19/England/OXON-FA108A/2021 | V | 1897 | insstopstop | 1 | 20210709 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | V | 1897 | L | 30 | 20230401 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | K | 1898 | del | 28 | 20230217 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | K | 1898 | N | 31 | 20230412 |
| EPI_ISL_19803489 | NSP3 | hCoV-19/USA/WI-WSLH-2500995/2025 | K | 1898 | R | 254 | 20250302 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | K | 1898 | stop | 50 | 20230401 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | K | 1898 | C | 1 | 20210526 |
| EPI_ISL_17275328 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45853/2023 | K | 1898 | T | 5 | 20230217 |
| EPI_ISL_3922893 | NSP3 | hCoV-19/USA/ID-IBL-749240/2021 | K | 1898 | L | 2 | 20210815 |
| EPI_ISL_8706782 | NSP3 | hCoV-19/England/NORT-YBGY9W/2021 | K | 1898 | I | 6 | 20211219 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1898 | S | 2 | 20220210 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1898 | Y | 1 | 20201214 |
| EPI_ISL_3078834 | NSP3 | hCoV-19/England/OXON-FA108A/2021 | K | 1898 | H | 3 | 20210709 |
| EPI_ISL_5617879 | NSP3 | hCoV-19/Guatemala/64094/2021 | K | 1898 | Q | 3 | 20210629 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | K | 1898 | insI | 3 | 20230401 |
| EPI_ISL_18092981 | NSP3 | hCoV-19/USA/CO-CDPHE-40730966/2023 | K | 1898 | E | 7 | 20230416 |
| EPI_ISL_8812982 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-102621-1217/2021 | K | 1898 | insRstop | 1 | 20211026 |
| EPI_ISL_17488742 | NSP3 | hCoV-19/Tianjin/TJCDC-258-020/2023 | D | 1899 | E | 7 | 20230325 |
| EPI_ISL_7547079 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-082421-1072/2021 | D | 1899 | I | 6 | 20210824 |
| EPI_ISL_18423867 | NSP3 | hCoV-19/USA/TX-HMH-134836/2023 | D | 1899 | B | 10 | 20231007 |
| EPI_ISL_18749506 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-01A-MM00074R/2024 | D | 1899 | A | 81 | 20240101 |
| EPI_ISL_18895877 | NSP3 | hCoV-19/env/Germany/BY-LGL-6138227/2024 | D | 1899 | V | 10 | 20240124 |
| EPI_ISL_19671583 | NSP3 | hCoV-19/Spain/AN-PMC-42304/2024 | D | 1899 | N | 309 | 20241016 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | D | 1899 | P | 2 | 20210318 |
| EPI_ISL_18207900 | NSP3 | hCoV-19/Japan/PG-559977/2023 | D | 1899 | H | 28 | 20230721 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | D | 1899 | S | 6 | 20230401 |
| EPI_ISL_3078834 | NSP3 | hCoV-19/England/OXON-FA108A/2021 | D | 1899 | L | 1 | 20210709 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | D | 1899 | del | 36 | 20230217 |
| EPI_ISL_10954825 | NSP3 | hCoV-19/USA/CO-CDPHE-34118618/2022 | D | 1899 | Y | 8 | 20220217 |
| EPI_ISL_16090624 | NSP3 | hCoV-19/USA/OH-CDC-QDX43991822/2022 | D | 1899 | G | 9 | 20221123 |
| EPI_ISL_19799953 | NSP3 | hCoV-19/USA/TX-HMH-M-147357/2025 | D | 1899 | R | 53 | 20250127 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | D | 1899 | K | 3 | 20220103 |
| EPI_ISL_4297325 | NSP3 | hCoV-19/USA/NC-UNC-2448/2021 | D | 1899 | Q | 1 | 20210822 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | D | 1899 | F | 1 | 20220110 |
| EPI_ISL_16027473 | NSP3 | hCoV-19/Indonesia/JI-ITD-59352NT/2022 | D | 1899 | C | 1 | 20221107 |
| EPI_ISL_19019299 | NSP3 | hCoV-19/Pakistan/KMU_PHRL-1212/2024 | F | 1900 | L | 14 | 20240312 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | F | 1900 | V | 8 | 20221229 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | F | 1900 | T | 1 | 20230217 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1900 | Q | 1 | 20210318 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1900 | S | 9 | 20220210 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | F | 1900 | insS | 1 | 20220103 |
| EPI_ISL_18139469 | NSP3 | hCoV-19/Egypt/CPHL-EGY23978/2022 | F | 1900 | stop | 3 | 20220814 |
| EPI_ISL_10397187 | NSP3 | hCoV-19/Turkey/HSGM-G1516/2022 | F | 1900 | Y | 5 | 20220214 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | F | 1900 | I | 4 | 20230412 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | F | 1900 | D | 1 | 20210526 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | F | 1900 | N | 1 | 20210520 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | F | 1900 | del | 30 | 20230217 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | F | 1900 | M | 1 | 20221226 |
| EPI_ISL_9455815 | NSP3 | hCoV-19/Sri Lanka/idea_uoc_00307/2022 | F | 1900 | H | 1 | 20220110 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | F | 1900 | G | 1 | 20201214 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | F | 1900 | C | 5 | 20230401 |
| EPI_ISL_19504628 | NSP3 | hCoV-19/Hubei/HCDC-YC7421/2024 | M | 1901 | V | 662 | 20240929 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | M | 1901 | W | 1 | 20210520 |
| EPI_ISL_19805661 | NSP3 | hCoV-19/USA/NY-URMC-P5S1U715-1/2025 | M | 1901 | I | 460 | 20250306 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | M | 1901 | Q | 2 | 20220203 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | M | 1901 | C | 10 | 20220103 |
| EPI_ISL_7508606 | NSP3 | hCoV-19/USA/CA-CSMC410/2020 | M | 1901 | insTSN | 1 | 20200803 |
| EPI_ISL_19305321 | NSP3 | hCoV-19/Japan/FR049-0643/2024 | M | 1901 | K | 17 | 20240722 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | M | 1901 | S | 1 | 20210806 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | M | 1901 | del | 29 | 20230217 |
| EPI_ISL_7508606 | NSP3 | hCoV-19/USA/CA-CSMC410/2020 | M | 1901 | E | 1 | 20200803 |
| EPI_ISL_11852134 | NSP3 | hCoV-19/Sweden/461848000990/2022 | M | 1901 | R | 40 | 20220308 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | M | 1901 | H | 61 | 20230401 |
| EPI_ISL_19311696 | NSP3 | hCoV-19/Singapore/R44MQ10/2024 | M | 1901 | T | 184 | 20240712 |
| EPI_ISL_19501277 | NSP3 | hCoV-19/Spain/CB-HUMV-214267/2024 | M | 1901 | L | 89 | 20240913 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | M | 1901 | F | 2 | 20221229 |
| EPI_ISL_5049922 | NSP3 | hCoV-19/Spain/CT-LabRefCat-804116/2021 | M | 1901 | G | 1 | 20210526 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | S | 1902 | H | 9 | 20220103 |
| EPI_ISL_3756848 | NSP3 | hCoV-19/USA/ID-IBL-747058/2021 | S | 1902 | insHstop | 1 | 20210806 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | S | 1902 | C | 4 | 20230401 |
| EPI_ISL_7891565 | NSP3 | hCoV-19/Russia/SPE-RII-6298S/2021 | S | 1902 | stop | 5 | 20211217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | S | 1902 | Q | 1 | 20201214 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | S | 1902 | V | 64 | 20230401 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | S | 1902 | K | 1 | 20220203 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | S | 1902 | T | 7 | 20230217 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | S | 1902 | del | 27 | 20230217 |
| EPI_ISL_18669045 | NSP3 | hCoV-19/Sweden/C-03_SE600_000200656408N2/2023 | S | 1902 | A | 66 | 20231202 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | S | 1902 | M | 1 | 20221229 |
| EPI_ISL_19016053 | NSP3 | hCoV-19/Turkey/HSGM-AA000243/2024 | S | 1902 | L | 21 | 20240207 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | S | 1902 | P | 6 | 20230412 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | S | 1902 | I | 2 | 20210520 |
| EPI_ISL_18472953 | NSP3 | hCoV-19/France/PDL-IPP25232/2023 | L | 1903 | V | 10 | 20231023 |
| EPI_ISL_496615 | NSP3 | hCoV-19/Panama/328927/2020 | L | 1903 | K | 1 | 20200215 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1903 | A | 2 | 20220210 |
| EPI_ISL_2547220 | NSP3 | hCoV-19/India/GJ-ICMR-NIV-INSACOG-GSEQ-3947/2021 | L | 1903 | Y | 3 | 20210528 |
| EPI_ISL_19225546 | NSP3 | hCoV-19/Spain/CT-HUGTiP-E3R183/2024 | L | 1903 | S | 9 | 20240616 |
| EPI_ISL_17347826 | NSP3 | hCoV-19/Puerto Rico/RCMI-1174642/2022 | L | 1903 | W | 1 | 20221209 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | L | 1903 | del | 27 | 20230217 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | L | 1903 | Q | 1 | 20230412 |
| EPI_ISL_18436962 | NSP3 | hCoV-19/Canada/AB-ABPHL-104995/2023 | L | 1903 | M | 20 | 20231009 |
| EPI_ISL_18765859 | NSP3 | hCoV-19/Sweden/Z-6047942245/2023 | L | 1903 | F | 21 | 20231123 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | L | 1903 | I | 61 | 20230401 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | L | 1903 | C | 10 | 20220103 |
| EPI_ISL_11355264 | NSP3 | hCoV-19/France/GES-ChNa-210065115001/2021 | L | 1903 | stop | 2 | 20210811 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | S | 1904 | Q | 1 | 20230217 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | S | 1904 | I | 1 | 20221229 |
| EPI_ISL_16575560 | NSP3 | hCoV-19/Japan/65691/2022 | S | 1904 | Y | 5 | 20220624 |
| EPI_ISL_3178730 | NSP3 | hCoV-19/Scotland/OXON-FA54D5/2021 | S | 1904 | M | 1 | 20210716 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | S | 1904 | del | 24 | 20230217 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | S | 1904 | V | 59 | 20230401 |
| EPI_ISL_19013417 | NSP3 | hCoV-19/Australia/WA15969/2024 | S | 1904 | P | 6 | 20240317 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | S | 1904 | H | 2 | 20210812 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | S | 1904 | T | 6 | 20221226 |
| EPI_ISL_19643387 | NSP3 | hCoV-19/USA/TX-HMH-M-146937/2024 | S | 1904 | F | 20 | 20241104 |
| EPI_ISL_11034301 | NSP3 | hCoV-19/India/MH-INSACOG-CSIR-NEERI1103/2022 | S | 1904 | C | 2 | 20220209 |
| EPI_ISL_17427528 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2861/2023 | S | 1904 | insF | 1 | 20230401 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | S | 1904 | N | 5 | 20230401 |
| EPI_ISL_2652051 | NSP3 | hCoV-19/Spain/CT-HUJ23-28033/2021 | S | 1904 | A | 2 | 20210520 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | S | 1904 | L | 16 | 20230412 |
| EPI_ISL_7508606 | NSP3 | hCoV-19/USA/CA-CSMC410/2020 | S | 1904 | D | 1 | 20200803 |
| EPI_ISL_13223213 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_ZJT3RVG7URYFHPBH/2022 | E | 1905 | Z | 7 | 20220524 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | E | 1905 | insstopCD | 1 | 20210118 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | E | 1905 | A | 8 | 20211015 |
| EPI_ISL_19014033 | NSP3 | hCoV-19/Japan/7506397_S29/2023 | E | 1905 | Q | 17 | 20231212 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | E | 1905 | C | 1 | 20210812 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | E | 1905 | N | 11 | 20230401 |
| EPI_ISL_18955396 | NSP3 | hCoV-19/Mozambique/INS-PCS0039211/2023 | E | 1905 | stop | 81 | 20231121 |
| EPI_ISL_12582771 | NSP3 | hCoV-19/Turkey/HSGM-GS2164/2022 | E | 1905 | G | 8 | 20220401 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | E | 1905 | del | 25 | 20230217 |
| EPI_ISL_16575560 | NSP3 | hCoV-19/Japan/65691/2022 | E | 1905 | V | 7 | 20220624 |
| EPI_ISL_17275349 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45875/2023 | E | 1905 | H | 2 | 20230217 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | E | 1905 | L | 1 | 20230412 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | E | 1905 | M | 3 | 20220209 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | E | 1905 | F | 1 | 20221226 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | E | 1905 | T | 4 | 20220203 |
| EPI_ISL_3178730 | NSP3 | hCoV-19/Scotland/OXON-FA54D5/2021 | E | 1905 | R | 1 | 20210716 |
| EPI_ISL_12675641 | NSP3 | hCoV-19/Germany/BW-RKI-I-786116/2022 | E | 1905 | D | 6 | 20220425 |
| EPI_ISL_18684101 | NSP3 | hCoV-19/England/CLIMB-CM7Y8DI1/2023 | E | 1905 | K | 29 | 20230308 |
| EPI_ISL_19147074 | NSP3 | hCoV-19/Wales/CLIMB-CM7YRI7W/2024 | Q | 1906 | Z | 3 | 20240501 |
| EPI_ISL_3078834 | NSP3 | hCoV-19/England/OXON-FA108A/2021 | Q | 1906 | I | 1 | 20210709 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | Q | 1906 | del | 21 | 20230217 |
| EPI_ISL_19215424 | NSP3 | hCoV-19/Spain/VC-CVA_CLIN-123747/2024 | Q | 1906 | H | 32 | 20240206 |
| EPI_ISL_19708020 | NSP3 | hCoV-19/USA/DE-DHSS-1017/2025 | Q | 1906 | E | 10 | 20250119 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | Q | 1906 | N | 7 | 20220103 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Q | 1906 | V | 2 | 20221229 |
| EPI_ISL_5934825 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD20702459611_CAM_IZSM_COLLI_TIGEM/2021 | Q | 1906 | W | 1 | 20211015 |
| EPI_ISL_16575555 | NSP3 | hCoV-19/Japan/20186/2021 | Q | 1906 | C | 2 | 20210326 |
| EPI_ISL_18777988 | NSP3 | hCoV-19/USA/HI-H2326859/2023 | Q | 1906 | L | 44 | 20231223 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | Q | 1906 | T | 60 | 20230401 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | Q | 1906 | P | 1 | 20210812 |
| EPI_ISL_18537432 | NSP3 | hCoV-19/Canada/NB-CHUDGLD-14K-MM00062U/2023 | Q | 1906 | R | 95 | 20231114 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | Q | 1906 | A | 1 | 20210318 |
| EPI_ISL_18972078 | NSP3 | hCoV-19/USA/UT-UPHL-240307958101/2024 | Q | 1906 | K | 62 | 20240228 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | Q | 1906 | Y | 4 | 20230401 |
| EPI_ISL_18936143 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00068/2023 | Q | 1906 | stop | 10 | 20230412 |
| EPI_ISL_7434961 | NSP3 | hCoV-19/Sweden/UUH-000200243349N2/2021 | L | 1907 | insXX | 1 | 20211118 |
| EPI_ISL_18546369 | NSP3 | hCoV-19/USA/TX-HMH-M-135283/2023 | L | 1907 | I | 10 | 20231101 |
| EPI_ISL_3279135 | NSP3 | hCoV-19/Israel/CVL-15571/2021 | L | 1907 | P | 2 | 20210721 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | L | 1907 | Y | 7 | 20220103 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | L | 1907 | E | 4 | 20230401 |
| EPI_ISL_12291395 | NSP3 | hCoV-19/India/TN-SPHL-ICMR-INSACOG-1129/2022 | L | 1907 | insstop | 1 | 20220118 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | L | 1907 | del | 21 | 20230217 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | L | 1907 | stop | 2 | 20220117 |
| EPI_ISL_3759985 | NSP3 | hCoV-19/USA/ID-IBL-747473/2021 | L | 1907 | insH | 1 | 20210809 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | L | 1907 | G | 2 | 20210727 |
| EPI_ISL_18936201 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00044/2023 | L | 1907 | Q | 13 | 20230410 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 1907 | C | 1 | 20221229 |
| EPI_ISL_788204 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-13053/2020 | L | 1907 | J | 1 | 20200827 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | L | 1907 | T | 60 | 20230401 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | L | 1907 | R | 4 | 20220209 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | L | 1907 | N | 1 | 20210812 |
| EPI_ISL_16277091 | NSP3 | hCoV-19/Sweden/6353804163/2022 | R | 1908 | stop | 6 | 20221210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | R | 1908 | F | 1 | 20210318 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | R | 1908 | T | 61 | 20230401 |
| EPI_ISL_17372592 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2512/2022 | R | 1908 | K | 5 | 20221226 |
| EPI_ISL_8724986 | NSP3 | hCoV-19/Colombia/VAC-UV-20030187/2022 | R | 1908 | E | 10 | 20220103 |
| EPI_ISL_17466166 | NSP3 | hCoV-19/India/CT-AIIMSR-VRDL-INSACOG-1165/2023 | R | 1908 | L | 321 | 20230404 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | R | 1908 | N | 8 | 20230401 |
| EPI_ISL_922193 | NSP3 | hCoV-19/England/OXON-F4EFBF/2021 | R | 1908 | D | 1 | 20210107 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | R | 1908 | G | 1 | 20210727 |
| EPI_ISL_19751866 | NSP3 | hCoV-19/Denmark/DCGC-691798/2025 | R | 1908 | Q | 671 | 20250203 |
| EPI_ISL_19212704 | NSP3 | hCoV-19/env/India/MH-NCL-32-01_2/2023 | R | 1908 | P | 2 | 20231201 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | R | 1908 | del | 21 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | R | 1908 | S | 1 | 20220210 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | K | 1909 | S | 2 | 20210115 |
| EPI_ISL_12529728 | NSP3 | hCoV-19/India/TG-GMCH-ICMR-INSACOG-Vijaya-142230706/2022 | K | 1909 | E | 2 | 20220419 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | K | 1909 | D | 1 | 20220117 |
| EPI_ISL_18936201 | NSP3 | hCoV-19/India/UT-NGS-GMC-HLD-04-00044/2023 | K | 1909 | stop | 2 | 20230410 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | K | 1909 | del | 21 | 20230217 |
| EPI_ISL_19564374 | NSP3 | hCoV-19/USA/CA-LACPHL-AY08980/2024 | K | 1909 | N | 28 | 20241009 |
| EPI_ISL_12610886 | NSP3 | hCoV-19/Turkey/HSGM-GS3013/2022 | K | 1909 | Q | 8 | 20220407 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | K | 1909 | H | 1 | 20210118 |
| EPI_ISL_10858579 | NSP3 | hCoV-19/Turkey/HSGM-G2537/2022 | K | 1909 | T | 3 | 20220217 |
| EPI_ISL_3078834 | NSP3 | hCoV-19/England/OXON-FA108A/2021 | K | 1909 | F | 1 | 20210709 |
| EPI_ISL_19563553 | NSP3 | hCoV-19/Netherlands/GE-RIVM-144037/2024 | K | 1909 | R | 218 | 20241030 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | K | 1909 | Y | 3 | 20220203 |
| EPI_ISL_17372431 | NSP3 | hCoV-19/India/TN-SPHL-2867/2023 | K | 1909 | M | 2 | 20230308 |
| EPI_ISL_19485298 | NSP3 | hCoV-19/env/Romania/IVN-E20/2022 | Q | 1910 | stop | 10 | 20221118 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | Q | 1910 | Y | 4 | 20230401 |
| EPI_ISL_1872412 | NSP3 | hCoV-19/Denmark/DCGC-63841/2021 | Q | 1910 | Z | 1 | 20210412 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | Q | 1910 | del | 18 | 20230217 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | Q | 1910 | S | 1 | 20210118 |
| EPI_ISL_17623862 | NSP3 | hCoV-19/Spain/CT-HUVH-EXE72899/2023 | Q | 1910 | H | 40 | 20230502 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Q | 1910 | A | 3 | 20221229 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | Q | 1910 | T | 58 | 20230401 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | Q | 1910 | I | 1 | 20210727 |
| EPI_ISL_8049908 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7096/2021 | Q | 1910 | C | 1 | 20211128 |
| EPI_ISL_19182132 | NSP3 | hCoV-19/Singapore/R27MQ110/2024 | Q | 1910 | R | 76 | 20240510 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | Q | 1910 | G | 1 | 20220203 |
| EPI_ISL_18449238 | NSP3 | hCoV-19/Japan/PG-579701/2023 | Q | 1910 | K | 181 | 20231012 |
| EPI_ISL_18147317 | NSP3 | hCoV-19/env/Germany/BY-LGL-5977126/2023 | Q | 1910 | L | 11 | 20230802 |
| EPI_ISL_19656841 | NSP3 | hCoV-19/Germany/NW-RKI-I-1146936/2024 | Q | 1910 | E | 3 | 20241202 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1910 | M | 1 | 20220210 |
| EPI_ISL_11173595 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-72482/2021 | Q | 1910 | N | 2 | 20211224 |
| EPI_ISL_10858584 | NSP3 | hCoV-19/Turkey/HSGM-G2544/2022 | I | 1911 | S | 1 | 20220217 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | I | 1911 | C | 1 | 20201214 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1911 | Y | 8 | 20220210 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | I | 1911 | del | 21 | 20230217 |
| EPI_ISL_19684119 | NSP3 | hCoV-19/USA/CO-CDPHE-42779404/2025 | I | 1911 | V | 651 | 20250107 |
| EPI_ISL_9445602 | NSP3 | hCoV-19/England/BRBR-3458D7E/2022 | I | 1911 | J | 5 | 20220126 |
| EPI_ISL_15057243 | NSP3 | hCoV-19/Philippines/PH-VUI-126451/2022 | I | 1911 | T | 6 | 20220818 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1911 | P | 2 | 20210318 |
| EPI_ISL_12146209 | NSP3 | hCoV-19/Turkey/HSGM-GS1829/2022 | I | 1911 | K | 2 | 20220401 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | I | 1911 | H | 1 | 20211211 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | I | 1911 | N | 59 | 20230401 |
| EPI_ISL_18335609 | NSP3 | hCoV-19/USA/MI-SHMSU-B04_I_0517_75/2023 | I | 1911 | L | 78 | 20230622 |
| EPI_ISL_9087737 | NSP3 | hCoV-19/Italy/CAM-90390292774/2022 | I | 1911 | stop | 1 | 20220117 |
| EPI_ISL_19680592 | NSP3 | hCoV-19/Australia/NSW-ICPMR-55919/2024 | I | 1911 | M | 222 | 20241209 |
| EPI_ISL_19656345 | NSP3 | hCoV-19/France/ARA-HCL024202511101/2024 | R | 1912 | S | 15 | 20241228 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | R | 1912 | K | 3 | 20210812 |
| EPI_ISL_19805606 | NSP3 | hCoV-19/USA/NY-URMC-P4S1U668-1/2025 | R | 1912 | C | 298 | 20250221 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | R | 1912 | N | 2 | 20210727 |
| EPI_ISL_19727364 | NSP3 | hCoV-19/USA/NY-PRL-250211_83B03/2025 | R | 1912 | H | 406 | 20250201 |
| EPI_ISL_8049908 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7096/2021 | R | 1912 | F | 1 | 20211128 |
| EPI_ISL_6357208 | NSP3 | hCoV-19/Romania/34264/2021 | R | 1912 | insICF | 1 | 20210118 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | R | 1912 | T | 60 | 20230401 |
| EPI_ISL_18692027 | NSP3 | hCoV-19/USA/UT-UPHL-231221335681/2023 | R | 1912 | L | 328 | 20231211 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | R | 1912 | del | 20 | 20230401 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | R | 1912 | V | 8 | 20220222 |
| EPI_ISL_11171337 | NSP3 | hCoV-19/USA/TX-Curative-254022/2022 | R | 1912 | P | 3 | 20220224 |
| EPI_ISL_17372431 | NSP3 | hCoV-19/India/TN-SPHL-2867/2023 | R | 1912 | I | 2 | 20230308 |
| EPI_ISL_6813827 | NSP3 | hCoV-19/Belgium/ULB-IBC_CV2164903287/2021 | R | 1912 | G | 1 | 20210905 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | S | 1913 | insLLstopYGTLK | 1 | 20220209 |
| EPI_ISL_9133544 | NSP3 | hCoV-19/USA/NY-SUNYQBR-61210452311890/2021 | S | 1913 | V | 6 | 20211211 |
| EPI_ISL_10943998 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8044/2022 | S | 1913 | K | 7 | 20220203 |
| EPI_ISL_3923045 | NSP3 | hCoV-19/USA/ID-IBL-748929/2021 | S | 1913 | Y | 1 | 20210812 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | S | 1913 | stop | 56 | 20230401 |
| EPI_ISL_19781164 | NSP3 | hCoV-19/Poland/106WSN2025_wsseol/2025 | S | 1913 | N | 130 | 20250219 |
| EPI_ISL_18758131 | NSP3 | hCoV-19/Brazil/PR-LACENPR-415454823/2023 | S | 1913 | C | 38 | 20231020 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | S | 1913 | A | 3 | 20220222 |
| EPI_ISL_19758913 | NSP3 | hCoV-19/Spain/CT-HUGTiP-F1R205/2025 | S | 1913 | G | 2706 | 20250215 |
| EPI_ISL_8049908 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-7096/2021 | S | 1913 | H | 1 | 20211128 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | S | 1913 | F | 1 | 20201214 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | S | 1913 | del | 16 | 20230401 |
| EPI_ISL_18751234 | NSP3 | hCoV-19/Brazil/SP-FIOCRUZ-12810/2023 | S | 1913 | R | 99 | 20231020 |
| EPI_ISL_11313506 | NSP3 | hCoV-19/Israel/SMC-7048761/2022 | S | 1913 | M | 1 | 20220301 |
| EPI_ISL_18982999 | NSP3 | hCoV-19/Liaoning/LNCDC-078-9/2024 | S | 1913 | I | 124 | 20240209 |
| EPI_ISL_7508606 | NSP3 | hCoV-19/USA/CA-CSMC410/2020 | S | 1913 | E | 1 | 20200803 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | S | 1913 | T | 9 | 20221229 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 1914 | Q | 1 | 20210318 |
| EPI_ISL_11948067 | NSP3 | hCoV-19/England/DHSC-CYNTUAM/2022 | A | 1914 | P | 5 | 20220215 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 1914 | T | 2 | 20221229 |
| EPI_ISL_19201334 | NSP3 | hCoV-19/Netherlands/ZH-RIVM-138583/2024 | A | 1914 | S | 46 | 20240603 |
| EPI_ISL_10944002 | NSP3 | hCoV-19/India/RJ-SMS-ICMR-INSACOG-TS-8952/2022 | A | 1914 | I | 2 | 20220209 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | A | 1914 | W | 1 | 20210727 |
| EPI_ISL_18342000 | NSP3 | hCoV-19/USA/DE-DHSS-B1261828/2023 | A | 1914 | G | 19 | 20230911 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | A | 1914 | C | 58 | 20230401 |
| EPI_ISL_5484593 | NSP3 | hCoV-19/England/PHEC-3M0A7MB3/2021 | A | 1914 | H | 1 | 20211016 |
| EPI_ISL_17372400 | NSP3 | hCoV-19/India/TN-SPHL-2825/2023 | A | 1914 | D | 27 | 20230226 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | A | 1914 | del | 21 | 20230217 |
| EPI_ISL_18057667 | NSP3 | hCoV-19/USA/TX-HMH-M-129909/2023 | A | 1914 | L | 14 | 20230709 |
| EPI_ISL_19425609 | NSP3 | hCoV-19/USA/TX-HMH-M-145746/2024 | A | 1914 | V | 31 | 20240831 |
| EPI_ISL_3588813 | NSP3 | hCoV-19/USA/ID-IBL-746479/2021 | A | 1914 | R | 1 | 20210805 |
| EPI_ISL_19213254 | NSP3 | hCoV-19/Israel/ICH-741201571/2024 | A | 1915 | V | 59 | 20240605 |
| EPI_ISL_3923086 | NSP3 | hCoV-19/USA/ID-IBL-749068/2021 | A | 1915 | insS | 1 | 20210812 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | A | 1915 | E | 1 | 20220210 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | A | 1915 | C | 55 | 20230401 |
| EPI_ISL_18057667 | NSP3 | hCoV-19/USA/TX-HMH-M-129909/2023 | A | 1915 | L | 21 | 20230709 |
| EPI_ISL_951455 | NSP3 | hCoV-19/England/OXON-F56BB0/2021 | A | 1915 | K | 1 | 20210115 |
| EPI_ISL_10817226 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-78076/2022 | A | 1915 | stop | 1 | 20220109 |
| EPI_ISL_18077212 | NSP3 | hCoV-19/Dominican Republic/2158017-LNSPDD/2023 | A | 1915 | T | 45 | 20230727 |
| EPI_ISL_16094010 | NSP3 | hCoV-19/Switzerland/BS-UHB-USB_2022_12_07_33f48013/2022 | A | 1915 | P | 6 | 20221202 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | A | 1915 | Y | 1 | 20210318 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | A | 1915 | insCL | 1 | 20220222 |
| EPI_ISL_18775178 | NSP3 | hCoV-19/USA/CA-HLX-STM-VV8V46NCC/2023 | A | 1915 | S | 102 | 20231209 |
| EPI_ISL_14942872 | NSP3 | hCoV-19/Malaysia/UNIMAS-HSIBUML470/2022 | A | 1915 | insK | 1 | 20220830 |
| EPI_ISL_18336540 | NSP3 | hCoV-19/USA/MI-SHMSU-F11_I_8546/2022 | A | 1915 | D | 6 | 20221129 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | A | 1915 | R | 1 | 20220120 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | A | 1915 | del | 11 | 20230217 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | A | 1915 | G | 4 | 20220222 |
| EPI_ISL_15762572 | NSP3 | hCoV-19/Italy/LOM-ASST-MS14/2022 | K | 1916 | Q | 2 | 20221108 |
| EPI_ISL_18057667 | NSP3 | hCoV-19/USA/TX-HMH-M-129909/2023 | K | 1916 | del | 13 | 20230709 |
| EPI_ISL_708023 | NSP3 | hCoV-19/Germany/SL-SU-OM003/2020 | K | 1916 | insXX | 7 | 20200619 |
| EPI_ISL_16242023 | NSP3 | hCoV-19/Japan/RIMD15781/2022 | K | 1916 | E | 8 | 20220728 |
| EPI_ISL_1936505 | NSP3 | hCoV-19/South Korea/KDCA3306/2021 | K | 1916 | T | 1 | 20210419 |
| EPI_ISL_19450559 | NSP3 | hCoV-19/Liaoning/LNCDC-340-14/2024 | K | 1916 | R | 191 | 20240914 |
| EPI_ISL_3178590 | NSP3 | hCoV-19/England/OXON-FA46C1/2021 | K | 1916 | D | 2 | 20210714 |
| EPI_ISL_17445936 | NSP3 | hCoV-19/Italy/APU-IZSPB-PT7862/2023 | K | 1916 | N | 19 | 20230221 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 1916 | I | 3 | 20221229 |
| EPI_ISL_17425894 | NSP3 | hCoV-19/India/MH-CSIR-2904/2023 | K | 1916 | stop | 73 | 20230401 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1916 | H | 2 | 20201214 |
| EPI_ISL_17427513 | NSP3 | hCoV-19/India/MH-CSIR-NEERI2886/2023 | K | 1916 | L | 5 | 20230401 |
| EPI_ISL_6810514 | NSP3 | hCoV-19/Pakistan/104950/2021 | K | 1917 | Q | 1 | 20210727 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | K | 1917 | del | 9 | 20230217 |
| EPI_ISL_14913398 | NSP3 | hCoV-19/USA/AZ-ASU90536/2022 | K | 1917 | N | 17 | 20220831 |
| EPI_ISL_19192583 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-15975/2024 | K | 1917 | E | 10 | 20240313 |
| EPI_ISL_1500230 | NSP3 | hCoV-19/USA/IL-S21WGS277/2021 | K | 1917 | stop | 1 | 20210330 |
| EPI_ISL_12610885 | NSP3 | hCoV-19/Turkey/HSGM-GS2718/2022 | K | 1917 | M | 1 | 20220407 |
| EPI_ISL_1936505 | NSP3 | hCoV-19/South Korea/KDCA3306/2021 | K | 1917 | T | 2 | 20210419 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1917 | D | 1 | 20210318 |
| EPI_ISL_19801656 | NSP3 | hCoV-19/Brazil/RR-IEC-25-008920/2025 | K | 1917 | R | 318 | 20250313 |
| EPI_ISL_3421812 | NSP3 | hCoV-19/England/OXON-FA7FE1/2020 | K | 1917 | Y | 1 | 20201229 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1917 | L | 3 | 20220210 |
| EPI_ISL_18238274 | NSP3 | hCoV-19/Czech Republic/UMTM66541/2020 | K | 1917 | P | 1 | 20201109 |
| EPI_ISL_18226323 | NSP3 | hCoV-19/env/India/MH-FMR_B7-51b/2023 | N | 1918 | D | 5 | 20230227 |
| EPI_ISL_12296028 | NSP3 | hCoV-19/Canada/QC-L00462824001/2022 | N | 1918 | Y | 8 | 20220411 |
| EPI_ISL_19351734 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242548/2024 | N | 1918 | E | 145 | 20240621 |
| EPI_ISL_18238274 | NSP3 | hCoV-19/Czech Republic/UMTM66541/2020 | N | 1918 | V | 1 | 20201109 |
| EPI_ISL_19719032 | NSP3 | hCoV-19/Italy/APU_UNIBA_APU-Ba1359/2025 | N | 1918 | S | 193 | 20250204 |
| EPI_ISL_18874735 | NSP3 | hCoV-19/USA/TX-HMH-M-137944/2024 | N | 1918 | C | 1 | 20240117 |
| EPI_ISL_1940069 | NSP3 | hCoV-19/India/KA-SEQ_503_S112_R1_001/2021 | N | 1918 | R | 2 | 20210405 |
| EPI_ISL_14398503 | NSP3 | hCoV-19/Germany/SL-RKI-I-924293/2022 | N | 1918 | H | 32 | 20220713 |
| EPI_ISL_17710059 | NSP3 | hCoV-19/India/UP-MRU-ICMR-19/2023 | N | 1918 | del | 10 | 20230429 |
| EPI_ISL_19339578 | NSP3 | hCoV-19/Brazil/PA-024113-IEC/2024 | N | 1918 | T | 72 | 20240520 |
| EPI_ISL_19334688 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-143082/2024 | N | 1918 | stop | 2 | 20240719 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | N | 1918 | L | 1 | 20201214 |
| EPI_ISL_17347890 | NSP3 | hCoV-19/Puerto Rico/RCMI-1177647/2022 | N | 1918 | B | 9 | 20221215 |
| EPI_ISL_19351753 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242815/2024 | N | 1918 | I | 8 | 20240711 |
| EPI_ISL_3421812 | NSP3 | hCoV-19/England/OXON-FA7FE1/2020 | N | 1918 | G | 1 | 20201229 |
| EPI_ISL_3421881 | NSP3 | hCoV-19/England/OXON-FA9116/2021 | N | 1918 | insCCC | 1 | 20210710 |
| EPI_ISL_14954190 | NSP3 | hCoV-19/USA/TX-HMH-M-114988/2022 | N | 1918 | K | 7 | 20220903 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | N | 1919 | L | 1 | 20220210 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | N | 1919 | E | 1 | 20201214 |
| EPI_ISL_14749041 | NSP3 | hCoV-19/India/OR-ILSGS17549/2022 | N | 1919 | Q | 1 | 20220129 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | N | 1919 | del | 10 | 20230217 |
| EPI_ISL_5324096 | NSP3 | hCoV-19/Italy/CAM_IZSM_RD00324671_CAM_IZSM_COLLI_TIGEM/2021 | N | 1919 | R | 3 | 20210918 |
| EPI_ISL_3421881 | NSP3 | hCoV-19/England/OXON-FA9116/2021 | N | 1919 | Y | 2 | 20210710 |
| EPI_ISL_10247958 | NSP3 | hCoV-19/France/GES-HMN-22022040641/2022 | N | 1919 | B | 4 | 20220103 |
| EPI_ISL_19351753 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242815/2024 | N | 1919 | T | 50 | 20240711 |
| EPI_ISL_17529070 | NSP3 | hCoV-19/Iceland/L-4071/2023 | N | 1919 | I | 4 | 20230415 |
| EPI_ISL_19687612 | NSP3 | hCoV-19/USA/NY-PRL-250108_81D10/2024 | N | 1919 | S | 136 | 20241218 |
| EPI_ISL_16027473 | NSP3 | hCoV-19/Indonesia/JI-ITD-59352NT/2022 | N | 1919 | K | 21 | 20221107 |
| EPI_ISL_4493800 | NSP3 | hCoV-19/USA/OR-OHSU-12502/2021 | N | 1919 | D | 1 | 20210817 |
| EPI_ISL_19351734 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242548/2024 | N | 1919 | stop | 147 | 20240621 |
| EPI_ISL_6014040 | NSP3 | hCoV-19/South Korea/KDCA15453/2021 | N | 1919 | H | 3 | 20211007 |
| EPI_ISL_19351753 | NSP3 | hCoV-19/India/MH-ICMR-NIV-242815/2024 | L | 1920 | del | 9 | 20240711 |
| EPI_ISL_8054640 | NSP3 | hCoV-19/France/IDF-HMN-21122150744/2021 | L | 1920 | F | 7 | 20211215 |
| EPI_ISL_984295 | NSP3 | hCoV-19/Belgium/UZA-UA-2532/2021 | L | 1920 | E | 1 | 20210127 |
| EPI_ISL_531663 | NSP3 | hCoV-19/Northern Ireland/QEUH-962346/2020 | L | 1920 | J | 2 | 20200810 |
| EPI_ISL_19192487 | NSP3 | hCoV-19/India/MH-ICMR-NIV-G-16060/2024 | L | 1920 | T | 7 | 20240405 |
| EPI_ISL_1178774 | NSP3 | hCoV-19/England/OXON-F692A6/2021 | L | 1920 | K | 1 | 20210210 |
| EPI_ISL_18874735 | NSP3 | hCoV-19/USA/TX-HMH-M-137944/2024 | L | 1920 | Y | 6 | 20240117 |
| EPI_ISL_17405478 | NSP3 | hCoV-19/Japan/PG-467448/2023 | L | 1920 | V | 389 | 20230319 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | L | 1920 | R | 1 | 20211211 |
| EPI_ISL_17488763 | NSP3 | hCoV-19/Tianjin/TJCDC-257-070/2023 | L | 1920 | I | 15 | 20230320 |
| EPI_ISL_17833534 | NSP3 | hCoV-19/Spain/MD-HGUGM-7570379/2023 | L | 1920 | S | 15 | 20230609 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1920 | G | 2 | 20220210 |
| EPI_ISL_6014040 | NSP3 | hCoV-19/South Korea/KDCA15453/2021 | L | 1920 | stop | 2 | 20211007 |
| EPI_ISL_3421812 | NSP3 | hCoV-19/England/OXON-FA7FE1/2020 | P | 1921 | K | 1 | 20201229 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | P | 1921 | del | 11 | 20230217 |
| EPI_ISL_18874735 | NSP3 | hCoV-19/USA/TX-HMH-M-137944/2024 | P | 1921 | V | 3 | 20240117 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | P | 1921 | D | 1 | 20221118 |
| EPI_ISL_19693090 | NSP3 | hCoV-19/USA/DE-DHSS-848/2025 | P | 1921 | L | 2939 | 20250113 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | P | 1921 | insTCFANKH | 1 | 20221118 |
| EPI_ISL_19663408 | NSP3 | hCoV-19/Canada/ON-PHL-202426924/2024 | P | 1921 | T | 222 | 20241230 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | P | 1921 | Y | 2 | 20210318 |
| EPI_ISL_19802456 | NSP3 | hCoV-19/USA/CO-CDPHE-43205473/2025 | P | 1921 | S | 4203 | 20250226 |
| EPI_ISL_8718065 | NSP3 | hCoV-19/USA/ID-IBL-781484/2021 | P | 1921 | I | 1 | 20211217 |
| EPI_ISL_18281590 | NSP3 | hCoV-19/Scotland/CLIMB-CM7YEHGM/2023 | P | 1921 | H | 107 | 20230824 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | P | 1921 | Q | 1 | 20201214 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | F | 1922 | E | 1 | 20210318 |
| EPI_ISL_18284382 | NSP3 | hCoV-19/USA/CA-LACPHL-AY02188/2023 | F | 1922 | I | 25 | 20230829 |
| EPI_ISL_8604454 | NSP3 | hCoV-19/Finland/R-17495/2021 | F | 1922 | C | 1 | 20211208 |
| EPI_ISL_840273 | NSP3 | hCoV-19/England/OXON-F42391/2020 | F | 1922 | D | 1 | 20201217 |
| EPI_ISL_18874735 | NSP3 | hCoV-19/USA/TX-HMH-M-137944/2024 | F | 1922 | V | 2 | 20240117 |
| EPI_ISL_11355266 | NSP3 | hCoV-19/France/GES-ChNa-210065839301/2021 | F | 1922 | Y | 3 | 20210813 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | F | 1922 | A | 2 | 20221118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | F | 1922 | T | 1 | 20220210 |
| EPI_ISL_3003645 | NSP3 | hCoV-19/England/OXON-F8CC54/2021 | F | 1922 | del | 5 | 20210701 |
| EPI_ISL_10678679 | NSP3 | hCoV-19/Turkey/HSGM-G1622/2022 | F | 1922 | S | 4 | 20220214 |
| EPI_ISL_19769224 | NSP3 | hCoV-19/Brazil/SC-LACENSC-422244321/2025 | F | 1922 | L | 249 | 20250106 |
| EPI_ISL_5054148 | NSP3 | hCoV-19/Senegal/cTE BM 0259/2020 | K | 1923 | insS | 1 | 20200626 |
| EPI_ISL_19498056 | NSP3 | hCoV-19/USA/MS-MSPHL-0354/2024 | K | 1923 | E | 108 | 20240823 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | K | 1923 | S | 7 | 20230217 |
| EPI_ISL_19686891 | NSP3 | hCoV-19/Sweden/N-24-16668/2024 | K | 1923 | R | 278 | 20241205 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | K | 1923 | V | 8 | 20221229 |
| EPI_ISL_16137548 | NSP3 | hCoV-19/USA/ID-IBL-867335/2022 | K | 1923 | stop | 51 | 20221122 |
| EPI_ISL_18844247 | NSP3 | hCoV-19/Japan/PG-553337/2023 | K | 1923 | Q | 7 | 20230714 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | K | 1923 | P | 1 | 20201214 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1923 | Y | 1 | 20210318 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | K | 1923 | T | 3 | 20230217 |
| EPI_ISL_16458473 | NSP3 | hCoV-19/Finland/THL-22079/2022 | K | 1923 | N | 40 | 20221223 |
| EPI_ISL_19316966 | NSP3 | hCoV-19/USA/PA-CDC-LC1110816/2024 | K | 1923 | M | 16 | 20240722 |
| EPI_ISL_18874735 | NSP3 | hCoV-19/USA/TX-HMH-M-137944/2024 | K | 1923 | L | 4 | 20240117 |
| EPI_ISL_14488427 | NSP3 | hCoV-19/USA/ID-IBL-842153/2022 | K | 1923 | del | 7 | 20220802 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | K | 1923 | D | 2 | 20221118 |
| EPI_ISL_10678679 | NSP3 | hCoV-19/Turkey/HSGM-G1622/2022 | L | 1924 | del | 5 | 20220214 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | L | 1924 | stop | 5 | 20211211 |
| EPI_ISL_5733521 | NSP3 | hCoV-19/Denmark/DCGC-190779/2021 | L | 1924 | S | 3 | 20211021 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | L | 1924 | F | 6 | 20221229 |
| EPI_ISL_3743154 | NSP3 | hCoV-19/USA/ID-IBL-745669/2021 | L | 1924 | P | 2 | 20210803 |
| EPI_ISL_15718624 | NSP3 | hCoV-19/India/DL-ILBSWGS7174/2022 | L | 1924 | M | 4 | 20220822 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1924 | Q | 1 | 20210318 |
| EPI_ISL_10833384 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82965/2022 | L | 1924 | D | 6 | 20220117 |
| EPI_ISL_3756846 | NSP3 | hCoV-19/USA/ID-IBL-746974/2021 | L | 1924 | C | 1 | 20210806 |
| EPI_ISL_19799986 | NSP3 | hCoV-19/USA/TX-HMH-M-147342/2025 | L | 1924 | V | 60 | 20250115 |
| EPI_ISL_12319521 | NSP3 | hCoV-19/Turkey/HSGM-G8366/2022 | L | 1924 | W | 2 | 20220312 |
| EPI_ISL_3421881 | NSP3 | hCoV-19/England/OXON-FA9116/2021 | L | 1924 | N | 2 | 20210710 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | L | 1924 | K | 1 | 20211222 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1924 | Y | 1 | 20220210 |
| EPI_ISL_2224672 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-43112/2021 | T | 1925 | E | 1 | 20210423 |
| EPI_ISL_18455253 | NSP3 | hCoV-19/env/Ukraine/80635/2023 | T | 1925 | A | 6 | 20230914 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | T | 1925 | H | 4 | 20211211 |
| EPI_ISL_16137548 | NSP3 | hCoV-19/USA/ID-IBL-867335/2022 | T | 1925 | D | 45 | 20221122 |
| EPI_ISL_1475636 | NSP3 | hCoV-19/England/OXON-F79F9D/2021 | T | 1925 | L | 1 | 20210302 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | T | 1925 | N | 1 | 20220120 |
| EPI_ISL_13544269 | NSP3 | hCoV-19/Brazil/SP-IB_RP37592_22/2022 | T | 1925 | insL | 1 | 20220222 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1925 | G | 1 | 20220210 |
| EPI_ISL_11355266 | NSP3 | hCoV-19/France/GES-ChNa-210065839301/2021 | T | 1925 | insstop | 3 | 20210813 |
| EPI_ISL_10678679 | NSP3 | hCoV-19/Turkey/HSGM-G1622/2022 | T | 1925 | del | 5 | 20220214 |
| EPI_ISL_18874735 | NSP3 | hCoV-19/USA/TX-HMH-M-137944/2024 | T | 1925 | K | 4 | 20240117 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | T | 1925 | M | 8 | 20220225 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | T | 1925 | S | 10 | 20221229 |
| EPI_ISL_2903351 | NSP3 | hCoV-19/England/OXON-F89F30/2020 | T | 1925 | P | 1 | 20201019 |
| EPI_ISL_19357759 | NSP3 | hCoV-19/Wales/CLIMB-CM7YGO43/2024 | T | 1925 | I | 12 | 20240811 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | T | 1925 | C | 1 | 20210319 |
| EPI_ISL_2854697 | NSP3 | hCoV-19/Indonesia/JI-NIHRD-WGS03206/2021 | T | 1925 | stop | 1 | 20210427 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | T | 1925 | V | 1 | 20230217 |
| EPI_ISL_8812974 | NSP3 | hCoV-19/USA/OR-TRACE-BENT-042221-1189/2021 | T | 1925 | Y | 1 | 20210422 |
| EPI_ISL_8329309 | NSP3 | hCoV-19/USA/ID-IBL-778905/2021 | T | 1925 | insstopH | 1 | 20211222 |
| EPI_ISL_15315724 | NSP3 | hCoV-19/Finland/THL-202218863/2022 | T | 1925 | R | 1 | 20220916 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | T | 1925 | insM | 1 | 20220120 |
| EPI_ISL_18422428 | NSP3 | hCoV-19/Argentina/INEI125791/2023 | C | 1926 | G | 248 | 20230713 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | C | 1926 | V | 2 | 20211211 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | C | 1926 | N | 1 | 20210319 |
| EPI_ISL_17275317 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45842/2023 | C | 1926 | H | 5 | 20230217 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | C | 1926 | A | 2 | 20221229 |
| EPI_ISL_19764151 | NSP3 | hCoV-19/Australia/NSW-ICPMR-56511/2025 | C | 1926 | F | 23 | 20250219 |
| EPI_ISL_17960529 | NSP3 | hCoV-19/Colombia/ANT-LDSP4735/2023 | C | 1926 | W | 2 | 20230524 |
| EPI_ISL_12146146 | NSP3 | hCoV-19/Turkey/HSGM-GS1760/2022 | C | 1926 | del | 5 | 20220401 |
| EPI_ISL_13446553 | NSP3 | hCoV-19/India/TN-INSACOG-CSIR-NEERI2065/2022 | C | 1926 | Y | 3 | 20220608 |
| EPI_ISL_10858375 | NSP3 | hCoV-19/Turkey/HSGM-G2095/2022 | C | 1926 | stop | 2 | 20220217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | C | 1926 | L | 2 | 20220210 |
| EPI_ISL_16137548 | NSP3 | hCoV-19/USA/ID-IBL-867335/2022 | C | 1926 | I | 49 | 20221122 |
| EPI_ISL_18874735 | NSP3 | hCoV-19/USA/TX-HMH-M-137944/2024 | C | 1926 | S | 23 | 20240117 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | C | 1926 | R | 8 | 20230217 |
| EPI_ISL_17181388 | NSP3 | hCoV-19/USA/TX-HMH-M-125980/2023 | C | 1926 | M | 4 | 20230217 |
| EPI_ISL_15905190 | NSP3 | hCoV-19/Germany/BW-RKI-I-1033639/2022 | A | 1927 | E | 4 | 20221111 |
| EPI_ISL_19814281 | NSP3 | hCoV-19/Luxembourg/LNS8243117/2025 | A | 1927 | V | 1383 | 20250128 |
| EPI_ISL_12319923 | NSP3 | hCoV-19/Turkey/HSGM-GS1659/2022 | A | 1927 | del | 5 | 20220401 |
| EPI_ISL_19004967 | NSP3 | hCoV-19/Pakistan/KMU_PHRL_1203/2024 | A | 1927 | S | 64 | 20240305 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | A | 1927 | C | 4 | 20230217 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | A | 1927 | Q | 2 | 20211211 |
| EPI_ISL_19294009 | NSP3 | hCoV-19/USA/LA-EVTL22250/2024 | A | 1927 | P | 5 | 20240626 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | A | 1927 | W | 1 | 20221229 |
| EPI_ISL_19601944 | NSP3 | hCoV-19/USA/PA-CDC-LC1126022/2024 | A | 1927 | T | 375 | 20241121 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | A | 1927 | G | 1 | 20221118 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | A | 1927 | N | 1 | 20220120 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | A | 1927 | M | 1 | 20201214 |
| EPI_ISL_14392334 | NSP3 | hCoV-19/Finland/VI-7648/2022 | T | 1928 | P | 12 | 20220711 |
| EPI_ISL_19365666 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-144728/2024 | T | 1928 | del | 5 | 20240807 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | T | 1928 | Q | 3 | 20221229 |
| EPI_ISL_18915576 | NSP3 | hCoV-19/Australia/QLD0x013F79/2024 | T | 1928 | S | 670 | 20240125 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | T | 1928 | L | 3 | 20221118 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1928 | M | 2 | 20220210 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | T | 1928 | insVI | 1 | 20220225 |
| EPI_ISL_19696705 | NSP3 | hCoV-19/Japan/FR049-1287/2024 | T | 1928 | I | 1560 | 20241126 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1928 | E | 1 | 20210318 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | T | 1928 | Y | 1 | 20220120 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | T | 1928 | V | 2 | 20230217 |
| EPI_ISL_19773506 | NSP3 | hCoV-19/USA/CA-CDPH-500145606/2025 | T | 1928 | A | 288 | 20250107 |
| EPI_ISL_3079088 | NSP3 | hCoV-19/England/OXON-FA2E52/2021 | T | 1928 | R | 1 | 20210706 |
| EPI_ISL_19787799 | NSP3 | hCoV-19/USA/IL-CDC-2-8272162/2025 | T | 1928 | N | 316 | 20250105 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | T | 1929 | L | 5 | 20211211 |
| EPI_ISL_12146054 | NSP3 | hCoV-19/Turkey/HSGM-GS1706/2022 | T | 1929 | P | 5 | 20220401 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1929 | F | 1 | 20210318 |
| EPI_ISL_8806498 | NSP3 | hCoV-19/India/MH-NCCS-2749001897168/2021 | T | 1929 | Y | 3 | 20210827 |
| EPI_ISL_3003645 | NSP3 | hCoV-19/England/OXON-F8CC54/2021 | T | 1929 | del | 1 | 20210701 |
| EPI_ISL_19378520 | NSP3 | hCoV-19/env/Ukraine/86520/2024 | T | 1929 | A | 3 | 20240722 |
| EPI_ISL_9512424 | NSP3 | hCoV-19/Italy/CAM-90390299789/2022 | T | 1929 | S | 8 | 20220131 |
| EPI_ISL_12146209 | NSP3 | hCoV-19/Turkey/HSGM-GS1829/2022 | T | 1929 | I | 31 | 20220401 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | T | 1929 | G | 1 | 20220804 |
| EPI_ISL_19350913 | NSP3 | hCoV-19/Israel/ICH-741202171/2024 | T | 1929 | N | 13 | 20240807 |
| EPI_ISL_19293711 | NSP3 | hCoV-19/env/Ukraine/84933/2024 | T | 1929 | K | 5 | 20240118 |
| EPI_ISL_19293711 | NSP3 | hCoV-19/env/Ukraine/84933/2024 | T | 1929 | insG | 4 | 20240118 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1929 | V | 1 | 20201214 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | T | 1929 | stop | 2 | 20230217 |
| EPI_ISL_8035692 | NSP3 | hCoV-19/Pakistan/Nano-B3-S-11/2021 | R | 1930 | D | 1 | 20211211 |
| EPI_ISL_12146054 | NSP3 | hCoV-19/Turkey/HSGM-GS1706/2022 | R | 1930 | stop | 2 | 20220401 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | R | 1930 | S | 6 | 20221229 |
| EPI_ISL_11333350 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-37/2022 | R | 1930 | V | 2 | 20220210 |
| EPI_ISL_19293711 | NSP3 | hCoV-19/env/Ukraine/84933/2024 | R | 1930 | G | 7 | 20240118 |
| EPI_ISL_19359060 | NSP3 | hCoV-19/USA/IA-SHL-2481402/2024 | R | 1930 | K | 126 | 20240812 |
| EPI_ISL_4198507 | NSP3 | hCoV-19/Italy/SAR-3020/2021 | R | 1930 | insGG | 1 | 20210817 |
| EPI_ISL_1475739 | NSP3 | hCoV-19/Northern Ireland/OXON-F7D807/2021 | R | 1930 | N | 2 | 20210315 |
| EPI_ISL_5086781 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46250/2020 | R | 1930 | L | 1 | 20200723 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | R | 1930 | F | 1 | 20201214 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | R | 1930 | E | 2 | 20230217 |
| EPI_ISL_1051850 | NSP3 | hCoV-19/England/OXON-F65802/2021 | R | 1930 | C | 1 | 20210113 |
| EPI_ISL_1109635 | NSP3 | hCoV-19/USA/TN-BEM-0001/2021 | R | 1930 | Q | 1 | 20210217 |
| EPI_ISL_19082413 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-140398/2024 | R | 1930 | I | 5 | 20240304 |
| EPI_ISL_3003645 | NSP3 | hCoV-19/England/OXON-F8CC54/2021 | R | 1930 | del | 2 | 20210701 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | R | 1930 | T | 3 | 20220120 |
| EPI_ISL_4569152 | NSP3 | hCoV-19/USA/OR-UW-21082848042/2021 | Q | 1931 | F | 1 | 20210828 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | Q | 1931 | S | 4 | 20220804 |
| EPI_ISL_17275314 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45839/2023 | Q | 1931 | T | 2 | 20230217 |
| EPI_ISL_19293711 | NSP3 | hCoV-19/env/Ukraine/84933/2024 | Q | 1931 | K | 14 | 20240118 |
| EPI_ISL_12582763 | NSP3 | hCoV-19/Turkey/HSGM-GS2077/2022 | Q | 1931 | H | 6 | 20220401 |
| EPI_ISL_11950506 | NSP3 | hCoV-19/England/DHSC-CYYB6UP/2022 | Q | 1931 | del | 1 | 20220213 |
| EPI_ISL_1475739 | NSP3 | hCoV-19/Northern Ireland/OXON-F7D807/2021 | Q | 1931 | W | 1 | 20210315 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | Q | 1931 | E | 3 | 20220225 |
| EPI_ISL_5086781 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46250/2020 | Q | 1931 | D | 1 | 20200723 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | Q | 1931 | P | 2 | 20230217 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | Q | 1931 | L | 3 | 20220210 |
| EPI_ISL_13300346 | NSP3 | hCoV-19/Slovenia/23-026143-MB/2022 | Q | 1931 | stop | 4 | 20220503 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | Q | 1931 | R | 8 | 20230217 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | Q | 1931 | I | 1 | 20210802 |
| EPI_ISL_17372611 | NSP3 | hCoV-19/India/TN-ICMR-SPHL-2514/2022 | Q | 1931 | C | 1 | 20221229 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | Q | 1931 | V | 3 | 20221118 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | V | 1932 | H | 2 | 20230217 |
| EPI_ISL_8827486 | NSP3 | hCoV-19/Nigeria/MRL-OS-0810/2021 | V | 1932 | E | 2 | 20210319 |
| EPI_ISL_19727693 | NSP3 | hCoV-19/USA/IL-RIPHL_123791_G/2025 | V | 1932 | I | 521 | 20250120 |
| EPI_ISL_17275301 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45826/2023 | V | 1932 | S | 4 | 20230217 |
| EPI_ISL_5086781 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46250/2020 | V | 1932 | K | 1 | 20200723 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | V | 1932 | Y | 1 | 20220804 |
| EPI_ISL_19724700 | NSP3 | hCoV-19/Canada/QC-L00841244001/2025 | V | 1932 | F | 208 | 20250111 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1932 | T | 2 | 20220210 |
| EPI_ISL_12610886 | NSP3 | hCoV-19/Turkey/HSGM-GS3013/2022 | V | 1932 | A | 9 | 20220407 |
| EPI_ISL_15315724 | NSP3 | hCoV-19/Finland/THL-202218863/2022 | V | 1932 | G | 2 | 20220916 |
| EPI_ISL_14800663 | NSP3 | hCoV-19/USA/NJ-GBW-B20394/2022 | V | 1932 | L | 70 | 20220821 |
| EPI_ISL_16604893 | NSP3 | hCoV-19/Shandong/SDCDC-0538/2023 | V | 1932 | D | 13 | 20230112 |
| EPI_ISL_9196492 | NSP3 | hCoV-19/Nigeria/PHR-LA-032/2021 | V | 1932 | M | 2 | 20211129 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | V | 1932 | C | 2 | 20220120 |
| EPI_ISL_11739706 | NSP3 | hCoV-19/Thailand/NIC_KRI_SEQ12517/2022 | V | 1933 | D | 2 | 20220308 |
| EPI_ISL_15762569 | NSP3 | hCoV-19/Italy/LOM-ASST-MS17/2022 | V | 1933 | G | 9 | 20221108 |
| EPI_ISL_12321752 | NSP3 | hCoV-19/Turkey/HSGM-GS2484/2022 | V | 1933 | S | 1 | 20220405 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | V | 1933 | Y | 1 | 20220120 |
| EPI_ISL_19448007 | NSP3 | hCoV-19/India/AS-DIB-1273/2024 | V | 1933 | F | 287 | 20240730 |
| EPI_ISL_1475739 | NSP3 | hCoV-19/Northern Ireland/OXON-F7D807/2021 | V | 1933 | K | 1 | 20210315 |
| EPI_ISL_1582415 | NSP3 | hCoV-19/Sri Lanka/NR26/2021 | V | 1933 | P | 1 | 20210322 |
| EPI_ISL_15522012 | NSP3 | hCoV-19/Germany/BY-RKI-I-1011736/2022 | V | 1933 | A | 16 | 20221011 |
| EPI_ISL_15316450 | NSP3 | hCoV-19/Pakistan/12052513/2022 | V | 1933 | T | 1 | 20220804 |
| EPI_ISL_12319923 | NSP3 | hCoV-19/Turkey/HSGM-GS1659/2022 | V | 1933 | H | 1 | 20220401 |
| EPI_ISL_19767232 | NSP3 | hCoV-19/Norway/3026/2025 | V | 1933 | I | 603 | 20250217 |
| EPI_ISL_3756623 | NSP3 | hCoV-19/USA/ID-IBL-744716/2021 | V | 1933 | M | 1 | 20210802 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1933 | C | 1 | 20230108 |
| EPI_ISL_7699510 | NSP3 | hCoV-19/USA/MN-CDC-IBX810878461244/2021 | V | 1933 | insK | 1 | 20211121 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | V | 1933 | E | 4 | 20220210 |
| EPI_ISL_16604893 | NSP3 | hCoV-19/Shandong/SDCDC-0538/2023 | V | 1933 | L | 19 | 20230112 |
| EPI_ISL_11739706 | NSP3 | hCoV-19/Thailand/NIC_KRI_SEQ12517/2022 | N | 1934 | R | 2 | 20220308 |
| EPI_ISL_6957042 | NSP3 | hCoV-19/Germany/HH-RKI-I-334513/2021 | N | 1934 | Y | 15 | 20211115 |
| EPI_ISL_14628350 | NSP3 | hCoV-19/USA/CA-HLX-STM-28CZJVFJV/2022 | N | 1934 | H | 5 | 20220801 |
| EPI_ISL_10834086 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-82639/2022 | N | 1934 | del | 2 | 20220118 |
| EPI_ISL_14584695 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16380/2022 | N | 1934 | K | 5 | 20220725 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | N | 1934 | V | 2 | 20230217 |
| EPI_ISL_11028150 | NSP3 | hCoV-19/Denmark/DCGC-421424/2022 | N | 1934 | B | 5 | 20220308 |
| EPI_ISL_1475739 | NSP3 | hCoV-19/Northern Ireland/OXON-F7D807/2021 | N | 1934 | Q | 2 | 20210315 |
| EPI_ISL_19513561 | NSP3 | hCoV-19/Sweden/W-50358517LX/2024 | N | 1934 | D | 149 | 20240927 |
| EPI_ISL_11383862 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-47/2022 | N | 1934 | F | 2 | 20220225 |
| EPI_ISL_7699510 | NSP3 | hCoV-19/USA/MN-CDC-IBX810878461244/2021 | N | 1934 | G | 1 | 20211121 |
| EPI_ISL_19649163 | NSP3 | hCoV-19/Heilongjiang/HLJCDC-2408/2024 | N | 1934 | S | 391 | 20241216 |
| EPI_ISL_5086781 | NSP3 | hCoV-19/USA/TX-HMH-MCoV-46250/2020 | N | 1934 | L | 1 | 20200723 |
| EPI_ISL_16408998 | NSP3 | hCoV-19/Turkey/KSS-MUPEAH4882522482/2022 | N | 1934 | I | 4 | 20221107 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | N | 1934 | stop | 1 | 20230108 |
| EPI_ISL_16604893 | NSP3 | hCoV-19/Shandong/SDCDC-0538/2023 | N | 1934 | T | 36 | 20230112 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | N | 1934 | C | 1 | 20210318 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | V | 1935 | M | 3 | 20230108 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | V | 1935 | A | 6 | 20230217 |
| EPI_ISL_17989101 | NSP3 | hCoV-19/Egypt/NRC-2040/2022 | V | 1935 | D | 2 | 20220116 |
| EPI_ISL_11739706 | NSP3 | hCoV-19/Thailand/NIC_KRI_SEQ12517/2022 | V | 1935 | R | 2 | 20220308 |
| EPI_ISL_19384471 | NSP3 | hCoV-19/Hubei/HCDC-EZ6404/2024 | V | 1935 | F | 14 | 20240724 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | V | 1935 | Y | 1 | 20220224 |
| EPI_ISL_14584695 | NSP3 | hCoV-19/Indonesia/BA-NIHRD-WGS-22-16380/2022 | V | 1935 | G | 3 | 20220725 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | V | 1935 | Q | 1 | 20201214 |
| EPI_ISL_16604893 | NSP3 | hCoV-19/Shandong/SDCDC-0538/2023 | V | 1935 | L | 14 | 20230112 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | V | 1935 | C | 1 | 20211006 |
| EPI_ISL_19822758 | NSP3 | hCoV-19/Finland/THL-01515/2025 | V | 1935 | I | 320 | 20250227 |
| EPI_ISL_1718058 | NSP3 | hCoV-19/Sri Lanka/MAN3/2021 | V | 1936 | S | 1 | 20210128 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | V | 1936 | Y | 1 | 20230217 |
| EPI_ISL_9520535 | NSP3 | hCoV-19/USA/ID-IBL-787426/2022 | V | 1936 | K | 3 | 20220120 |
| EPI_ISL_16113401 | NSP3 | hCoV-19/USA/TX-HMH-M-119236/2022 | V | 1936 | C | 1 | 20221201 |
| EPI_ISL_4569152 | NSP3 | hCoV-19/USA/OR-UW-21082848042/2021 | V | 1936 | stop | 1 | 20210828 |
| EPI_ISL_19439365 | NSP3 | hCoV-19/USA/CA-CDPH-500141470/2024 | V | 1936 | L | 119 | 20240807 |
| EPI_ISL_19718663 | NSP3 | hCoV-19/USA/CO-CDPHE-42909535/2025 | V | 1936 | I | 560 | 20250127 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | V | 1936 | F | 2 | 20230217 |
| EPI_ISL_16604893 | NSP3 | hCoV-19/Shandong/SDCDC-0538/2023 | V | 1936 | D | 2 | 20230112 |
| EPI_ISL_15062038 | NSP3 | hCoV-19/USA/NY-Wadsworth-22043543-01/2022 | V | 1936 | A | 9 | 20220905 |
| EPI_ISL_5596882 | NSP3 | hCoV-19/Cameroon/CERI-NPHL-K026045/2021 | V | 1936 | G | 3 | 20210924 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | V | 1936 | T | 2 | 20220224 |
| EPI_ISL_17488779 | NSP3 | hCoV-19/Tianjin/TJCDC-257-033/2023 | V | 1936 | E | 1 | 20230321 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | V | 1936 | R | 1 | 20210823 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1937 | stop | 2 | 20230108 |
| EPI_ISL_19499743 | NSP3 | hCoV-19/USA/TX-HMH-M-146157/2024 | T | 1937 | I | 18 | 20240903 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | T | 1937 | V | 1 | 20210823 |
| EPI_ISL_19315326 | NSP3 | hCoV-19/Hubei/HCDC-XY6130/2024 | T | 1937 | A | 328 | 20240720 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1937 | L | 1 | 20201214 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | T | 1937 | K | 5 | 20230217 |
| EPI_ISL_11333412 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-40/2022 | T | 1937 | S | 2 | 20220224 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1937 | E | 1 | 20210318 |
| EPI_ISL_12934313 | NSP3 | hCoV-19/USA/OR-TRACE-LINN-011022-1533/2022 | T | 1937 | del | 1 | 20220110 |
| EPI_ISL_842141 | NSP3 | hCoV-19/England/QEUH-A624CA/2020 | T | 1937 | R | 1 | 20201012 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | T | 1937 | N | 4 | 20230217 |
| EPI_ISL_16401765 | NSP3 | hCoV-19/Pakistan/PB-PPHRL-PACP-1114/2022 | T | 1937 | M | 1 | 20221118 |
| EPI_ISL_17275316 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45841/2023 | T | 1937 | Q | 2 | 20230217 |
| EPI_ISL_11507475 | NSP3 | hCoV-19/Turkey/HSGM-G7770/2022 | T | 1937 | P | 1 | 20220311 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | T | 1938 | Y | 1 | 20201214 |
| EPI_ISL_8806488 | NSP3 | hCoV-19/India/MH-NCCS-2748700580210/2021 | T | 1938 | K | 5 | 20210826 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | T | 1938 | R | 3 | 20230217 |
| EPI_ISL_16921904 | NSP3 | hCoV-19/Jiangsu/SQCDC-036/2023 | T | 1938 | L | 2 | 20230116 |
| EPI_ISL_18436051 | NSP3 | hCoV-19/Italy/LOM-69495593/2023 | T | 1938 | S | 3 | 20231020 |
| EPI_ISL_19082639 | NSP3 | hCoV-19/USA/TX-HMH-M-140412/2024 | T | 1938 | I | 67 | 20240308 |
| EPI_ISL_4530160 | NSP3 | hCoV-19/England/PHEC-3G071G5E/2021 | T | 1938 | Q | 1 | 20210919 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | T | 1938 | del | 1 | 20220210 |
| EPI_ISL_3775908 | NSP3 | hCoV-19/England/PHEC-T308T849/2021 | T | 1938 | V | 2 | 20210823 |
| EPI_ISL_19683932 | NSP3 | hCoV-19/USA/CO-CDPHE-42779824/2025 | T | 1938 | A | 342 | 20250101 |
| EPI_ISL_16560204 | NSP3 | hCoV-19/Jordan/MOH-CPHL/2023 | T | 1938 | insNK | 1 | 20230108 |
| EPI_ISL_1249201 | NSP3 | hCoV-19/England/OXON-F705C1/2021 | T | 1938 | F | 1 | 20210222 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | T | 1938 | E | 1 | 20210318 |
| EPI_ISL_16113401 | NSP3 | hCoV-19/USA/TX-HMH-M-119236/2022 | T | 1938 | N | 3 | 20221201 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | T | 1938 | stop | 1 | 20210801 |
| EPI_ISL_19384178 | NSP3 | hCoV-19/South Korea/KDCA294888/2024 | K | 1939 | E | 2 | 20240810 |
| EPI_ISL_19663322 | NSP3 | hCoV-19/Canada/ON-PHL-202500717/2025 | K | 1939 | R | 296 | 20250103 |
| EPI_ISL_4440091 | NSP3 | hCoV-19/Ukraine/60-62499/2021 | K | 1939 | D | 1 | 20210615 |
| EPI_ISL_4400504 | NSP3 | hCoV-19/Netherlands/NB-RIVM-58045/2021 | K | 1939 | M | 32 | 20210831 |
| EPI_ISL_3032392 | NSP3 | hCoV-19/Czech Republic/NRL_7966/2021 | K | 1939 | C | 2 | 20210504 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | K | 1939 | del | 1 | 20220210 |
| EPI_ISL_12955385 | NSP3 | hCoV-19/Russia/LIP-CRIE-7730694216/2022 | K | 1939 | T | 4 | 20220215 |
| EPI_ISL_17653126 | NSP3 | hCoV-19/USA/AZ-ASPHL-1296/2023 | K | 1939 | N | 36 | 20230501 |
| EPI_ISL_1582415 | NSP3 | hCoV-19/Sri Lanka/NR26/2021 | K | 1939 | I | 1 | 20210322 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | K | 1939 | Q | 4 | 20230217 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | K | 1939 | L | 1 | 20230217 |
| EPI_ISL_16670994 | NSP3 | hCoV-19/Jiangsu/SQCDC-004/2023 | I | 1940 | F | 1 | 20230106 |
| EPI_ISL_19448585 | NSP3 | hCoV-19/USA/VA-GBW-H10-017-6414/2023 | I | 1940 | T | 7 | 20231121 |
| EPI_ISL_7986372 | NSP3 | hCoV-19/Pakistan/124743/2021 | I | 1940 | H | 1 | 20211006 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | I | 1940 | Q | 2 | 20210801 |
| EPI_ISL_19297425 | NSP3 | hCoV-19/Russia/SPE-RII-MH193146S/2024 | I | 1940 | L | 104 | 20240626 |
| EPI_ISL_17275353 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45879/2023 | I | 1940 | del | 1 | 20230217 |
| EPI_ISL_19803861 | NSP3 | hCoV-19/USA/WI-WSLH-2500732/2025 | I | 1940 | V | 428 | 20250209 |
| EPI_ISL_16398744 | NSP3 | hCoV-19/USA/CO-CDC-STM-BJ2AQV6FJ/2022 | I | 1940 | J | 5 | 20221220 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | I | 1940 | N | 1 | 20220210 |
| EPI_ISL_16604893 | NSP3 | hCoV-19/Shandong/SDCDC-0538/2023 | I | 1940 | K | 3 | 20230112 |
| EPI_ISL_16814843 | NSP3 | hCoV-19/Spain/AS-232303428/2023 | I | 1940 | R | 4 | 20230124 |
| EPI_ISL_19648203 | NSP3 | hCoV-19/Luxembourg/LNS5514242/2024 | I | 1940 | M | 118 | 20241122 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | I | 1940 | D | 2 | 20210318 |
| EPI_ISL_13801698 | NSP3 | hCoV-19/Netherlands/ZE-MVD-CWGS2202746/2022 | I | 1940 | A | 1 | 20220629 |
| EPI_ISL_19788382 | NSP3 | hCoV-19/South Korea/KDCA297104/2025 | A | 1941 | T | 2098 | 20250224 |
| EPI_ISL_18950419 | NSP3 | hCoV-19/Canada/ON-PHL-202405665/2024 | A | 1941 | S | 112 | 20240222 |
| EPI_ISL_8806488 | NSP3 | hCoV-19/India/MH-NCCS-2748700580210/2021 | A | 1941 | R | 2 | 20210826 |
| EPI_ISL_12320610 | NSP3 | hCoV-19/Turkey/HSGM-G8494/2022 | A | 1941 | del | 1 | 20220410 |
| EPI_ISL_19795375 | NSP3 | hCoV-19/USA/IL-CDC-LC1135347/2025 | A | 1941 | V | 2734 | 20250314 |
| EPI_ISL_8724991 | NSP3 | hCoV-19/Colombia/VAC-UV-20030255/2022 | A | 1941 | insS | 1 | 20220103 |
| EPI_ISL_15292360 | NSP3 | hCoV-19/India/MH-NCCS-P1162100540614/2021 | A | 1941 | H | 1 | 20211221 |
| EPI_ISL_6034412 | NSP3 | hCoV-19/USA/MA-CDCBI-CRSP_22XICNL3CF4UEETY/2021 | A | 1941 | P | 1 | 20211029 |
| EPI_ISL_17275341 | NSP3 | hCoV-19/Italy/CAM-TIGEM-IZSM-COLLI-45866/2023 | A | 1941 | F | 1 | 20230217 |
| EPI_ISL_17982713 | NSP3 | hCoV-19/USA/CA-SEARCH-218603/2022 | A | 1941 | E | 15 | 20221019 |
| EPI_ISL_16534643 | NSP3 | hCoV-19/Singapore/R3MR1/2023 | A | 1941 | G | 14 | 20230105 |
| EPI_ISL_17686189 | NSP3 | hCoV-19/USA/TX-HMH-128633/2023 | A | 1941 | L | 5 | 20230417 |
| EPI_ISL_19757695 | NSP3 | hCoV-19/USA/NY-WMC-6300/2024 | L | 1942 | F | 186 | 20240710 |
| EPI_ISL_4348473 | NSP3 | hCoV-19/Thailand/ChaiNat_SEQ16157/2021 | L | 1942 | R | 2 | 20210907 |
| EPI_ISL_12319880 | NSP3 | hCoV-19/Turkey/HSGM-GS1548/2022 | L | 1942 | H | 2 | 20220401 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | L | 1942 | Q | 1 | 20201214 |
| EPI_ISL_18244552 | NSP3 | hCoV-19/England/CLIMB-CM7YRZ3N/2023 | L | 1942 | I | 11 | 20230901 |
| EPI_ISL_14796013 | NSP3 | hCoV-19/Sweden/03_SE600_500000123181SP/2022 | L | 1942 | T | 2 | 20220113 |
| EPI_ISL_3743165 | NSP3 | hCoV-19/USA/ID-IBL-744829/2021 | L | 1942 | stop | 1 | 20210801 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | L | 1942 | K | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | L | 1942 | D | 1 | 20210318 |
| EPI_ISL_15931936 | NSP3 | hCoV-19/USA/VA-CAV_VAS3N_00016441_01/2022 | L | 1942 | P | 6 | 20221014 |
| EPI_ISL_12320610 | NSP3 | hCoV-19/Turkey/HSGM-G8494/2022 | L | 1942 | V | 3 | 20220410 |
| EPI_ISL_1475715 | NSP3 | hCoV-19/Scotland/OXON-F7D166/2021 | L | 1942 | M | 1 | 20210313 |
| EPI_ISL_1704069 | NSP3 | hCoV-19/India/MH-ICMR-NIV-INSACOG-GSEQ-15/2021 | K | 1943 | L | 1 | 20210131 |
| EPI_ISL_14975638 | NSP3 | hCoV-19/South Korea/KDCA116273/2022 | K | 1943 | Q | 2 | 20220902 |
| EPI_ISL_13620934 | NSP3 | hCoV-19/Turkey/HSGM-IST-03021/2022 | K | 1943 | G | 1 | 20220623 |
| EPI_ISL_12610885 | NSP3 | hCoV-19/Turkey/HSGM-GS2718/2022 | K | 1943 | S | 4 | 20220407 |
| EPI_ISL_14796013 | NSP3 | hCoV-19/Sweden/03_SE600_500000123181SP/2022 | K | 1943 | stop | 4 | 20220113 |
| EPI_ISL_5532934 | NSP3 | hCoV-19/USA/WA-CDC-UW21101130906/2021 | K | 1943 | A | 1 | 20211011 |
| EPI_ISL_19647888 | NSP3 | hCoV-19/Canada/ON-PHL-202426163/2024 | K | 1943 | N | 1501 | 20241217 |
| EPI_ISL_19022618 | NSP3 | hCoV-19/Russia/SPE-RII-MH168335S/2024 | K | 1943 | M | 192 | 20240215 |
| EPI_ISL_17686189 | NSP3 | hCoV-19/USA/TX-HMH-128633/2023 | K | 1943 | I | 2 | 20230417 |
| EPI_ISL_19814903 | NSP3 | hCoV-19/Canada/AB-ABPHL-131507/2025 | K | 1943 | R | 1735 | 20250319 |
| EPI_ISL_14078242 | NSP3 | hCoV-19/Brazil/RJ-FIOCRUZ-15304/2022 | K | 1943 | T | 3 | 20220628 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | K | 1943 | P | 1 | 20210318 |
| EPI_ISL_19324716 | NSP3 | hCoV-19/USA/NY-GBW-GKPLAAAA38873/2024 | K | 1943 | E | 5 | 20240801 |
| EPI_ISL_17162833 | NSP3 | hCoV-19/Japan/PG-454696/2023 | G | 1944 | A | 1 | 20230130 |
| EPI_ISL_12146269 | NSP3 | hCoV-19/Turkey/HSGM-GS1728/2022 | G | 1944 | I | 2 | 20220401 |
| EPI_ISL_18403023 | NSP3 | hCoV-19/Israel/ICH-741199576/2023 | G | 1944 | V | 13 | 20231005 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1944 | K | 1 | 20220210 |
| EPI_ISL_14676518 | NSP3 | hCoV-19/USA/NC-UNC-R221377/2022 | G | 1944 | D | 5 | 20220715 |
| EPI_ISL_19816429 | NSP3 | hCoV-19/USA/CA-SEARCH-233787/2024 | G | 1944 | C | 10 | 20240101 |
| EPI_ISL_18098591 | NSP3 | hCoV-19/USA/TX-HMH-M-130848/2023 | G | 1944 | S | 11 | 20230801 |
| EPI_ISL_12006167 | NSP3 | hCoV-19/South Africa/NICD-N31006/2022 | G | 1944 | H | 1 | 20220126 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1944 | P | 1 | 20210318 |
| EPI_ISL_10729410 | NSP3 | hCoV-19/India/KA-SEQ_12926_S1_R1_001/2022 | G | 1945 | V | 1 | 20220210 |
| EPI_ISL_1663023 | NSP3 | hCoV-19/USA/IN-ISDHQ73/2021 | G | 1945 | Y | 1 | 20210318 |
| EPI_ISL_906121 | NSP3 | hCoV-19/Slovenia/2020-V0-271479/2020 | G | 1945 | C | 1 | 20201214 |